SimpleITK/Tcon 2011 5 18: Difference between revisions

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*DOXYGEN: http://erie.nlm.nih.gov/~blowek1/SimpleITK/index.html
*DOXYGEN: http://erie.nlm.nih.gov/~blowek1/SimpleITK/index.html
*JIRA: https://itk.icts.uiowa.edu/jira/browse/SIMPLEITK
*JIRA: https://itk.icts.uiowa.edu/jira/browse/SIMPLEITK
= User Feedback =
==Hans==
== Other Users ==
* ImageJDev/FIJI hackathon: Jan 29th - Feb 11th
** Integrate ITK with ImageJ
** Integrate ITK with CellProfiler
* ImageJDev image is 5D (x,y,z,t,channel)
** Internal class ImagePlus use Java arrays


= Daily Details=
= Daily Details=
==Currently Open Topics In next==
==Currently Open Topics In next==
*SIMPLEITK-1_registration
*SIMPLEITK-1_registration
*069-IncludeAndSrcDirs-G
*SIMPLEITK-51_munged_json
*071-CodeGenerationDocumentation-GH
**https://github.com/SimpleITK/SimpleITK/commit/ac7d48af6515c57d7781a04db994aa48d232a699
*DoxygenFixes
*SIMPLEITK-78_LabelStatistics
**do minor fixes need JIRA issue?
**https://github.com/SimpleITK/SimpleITK/commit/c26f90155f29c0013a9642a7505e7c4e04fe42b2
**https://github.com/SimpleITK/SimpleITK/commit/30c1e2dc8b8eaae32461592b04e13d1627868737
*SIMPLEITK-77_imshow_function
**https://github.com/SimpleITK/SimpleITK/commit/877873be4f9985165b14a0d67af06d1c993449ec
**Create cyclic dependencies
*SIMPLEITK-80_no_individual_headers
**https://github.com/SimpleITK/SimpleITK/commit/a5e0fd6d14ba3f9048bf66475a0922ebbc86d23f
**Disputed if the cost to benefit is there (Dan vs Brad)!


==Other Open Topics==
==Other Open Topics==


*Documentation
** Developer Practices
** Getting Started


*CMake
*CMake
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** R, C#
** R, C#
** Update to best CMake practices
** Update to best CMake practices
** Hans has new CMake issues!


* How should we generate binary Masks?
* We are not consistent with our described conventions!
** uint8 and 255?
** http://erie.nlm.nih.gov/~blowek1/SimpleITK/Conventions.html
** This works well for binary morphology
**https://itk.icts.uiowa.edu/jira/browse/SIMPLEITK-84
** NEED to add issue for mask consistency


* 4-AddingGetPixelMethods
** What to do about vector pixels and complex pixels?
** implemented interface in python
** Still needs testing


*40-ConnectingSimpleITKImageTOJava
*40-ConnectingSimpleITKImageTOJava
** What happened to the ImportImageFilter?


*11-AddingFFTs
*11-AddingFFTs
** Should Geatan's IJ paper be move into ITK?
** Should Geatan's IJ paper be move into ITK?
** How do we generate kernels? For both FFTs and convolution filters?
** should be completed before lunch today!


* 49-GeometryTransforms
* 49-GeometryTransforms
** How do we specify Regions?
** How do we specify Regions?
* AddingOperators
** Implemented in C++
** Partially implemented in Python
** What other languages would benefit operators?


* Test drivers need work
* Test drivers need work
** Can we reuse ITK's?
** Can we reuse ITK's?
** They currently don't work with Valgrind due to sub processes
** They currently don't work with Valgrind due to sub processes
* 4-AddingGetPixelMethods
** CLOSED - merged to master
* AddingOperators
** Completed


==Review JIRA Issues==
==Review JIRA Issues==
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* Registration is very important
* Registration is very important
= Users =
* ImageJDev/FIJI hackathon: Jan 29th - Feb 11th
** Integrate ITK with ImageJ
** Integrate ITK with CellProfiler
* ImageJDev image is 5D (x,y,z,t,channel)
** Internal class ImagePlus use Java arrays


= Action Items =
= Action Items =

Latest revision as of 17:51, 13 February 2013

Tcon Information

Phone Line: 

  Please join the following teleconference line:
      Toll-Free #:      1-800-704-9804 
      International #:  1-404-920-6604
      Participant Code: 61466276

  Wednesday, May 4th, 9:30am Eastern Time

http://readytalk.com



Attendees

  • Dan Blezek
  • Brad Lowekamp
  • Gabe Hart
  • Luis Ibanez

Links


User Feedback

Hans

Other Users

  • ImageJDev/FIJI hackathon: Jan 29th - Feb 11th
    • Integrate ITK with ImageJ
    • Integrate ITK with CellProfiler
  • ImageJDev image is 5D (x,y,z,t,channel)
    • Internal class ImagePlus use Java arrays


Daily Details

Currently Open Topics In next

Other Open Topics

  • Documentation
    • Developer Practices
    • Getting Started
  • CMake
    • Shared Libraries
    • Installation
    • R, C#
    • Update to best CMake practices
    • Hans has new CMake issues!


  • 40-ConnectingSimpleITKImageTOJava
    • What happened to the ImportImageFilter?
  • 11-AddingFFTs
    • Should Geatan's IJ paper be move into ITK?
    • should be completed before lunch today!
  • 49-GeometryTransforms
    • How do we specify Regions?
  • Test drivers need work
    • Can we reuse ITK's?
    • They currently don't work with Valgrind due to sub processes


  • 4-AddingGetPixelMethods
    • CLOSED - merged to master
  • AddingOperators
    • Completed

Review JIRA Issues

Any Blocking issues which need to be addressed?

Schedule

Discuss long term goals and milestones.

  • Documentations
    • Luis to begin Slide Documentation
      • Getting started guide
      • Users Guide
    • How to populate Doxygen
  • Automate Script to List filters wrapped
    • This script should take as input a list of ITK Modules or Directories, for each modual determine which filters are implemented in SimpleITK
    • Additional input would include filter/files to exclude
    • Output could be a dox file, so that it could be a doxygen related page
  • Registration is very important

Action Items

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