|
|
| (37 intermediate revisions by 3 users not shown) |
| Line 2: |
Line 2: |
| BatchMake can process datasets locally or on distributed systems using Condor. | | BatchMake can process datasets locally or on distributed systems using Condor. |
|
| |
|
| Common Features:
| | = Documentation = |
| | *[[batchmake_install|Install BatchMake]] |
| | *[[batchmake_documentation|Functions]] |
| | *[[batchmake_grid|Grid]] |
| | *[[batchmake_faq|FAQ]] |
| | *[[batchmake_tutorial|Tutorial]] |
| | *[[MetaIO|MetaIO]] |
| | *[[batchmake_slicer|BatchMake in Slicer]] |
|
| |
|
| * BSD License
| | = Developers = |
| * CMake like scripting langage
| | *[[batchmake_developers|For Developers]] |
| * Distributed Scripting via Condor
| |
| * Central remote website for online statistical analysis
| |
| * User Interface using FLTK
| |
| * Cross platform
| |
| | |
| = BatchMake = | |
| ==List of available commands:==
| |
| | |
| *'''''AppendFile''''' Add a string to the end of a file
| |
| *'''''CloseTCPSocket''''' Close a TCP/IP socket
| |
| *'''''DashboardExperiment''''' Specify the encrypted name of the experiment to report on
| |
| *'''''DashboardHost''''' Specify the hostname of the central database manager | |
| *'''''DashboardNotify''''' Specify the hostname of the central database manager
| |
| *'''''DashboardSend''''' Send the results of a program to the central database for data collection
| |
| *'''''DeleteFile''''' Delete a file on disk
| |
| *'''''Echo''''' Print messages on the standard output
| |
| *'''''ExtractSlice''''' Extract a slice from a 3D image volume
| |
| *'''''ExtractString''''' Extract a string from a string chain
| |
| *'''''ForEach''''' Create a "for" loop
| |
| *'''''GetParam''''' Access directly a parameter from a sequence
| |
| *'''''If''''' Defines a conditional statement
| |
| *'''''Inc''''' Increment a number by a certain amount
| |
| *'''''Include''''' Include another batchmake script
| |
| *'''''Int Convert''''' a variable to integer
| |
| *'''''ListDirInDir''''' List all the directories in a specified directory
| |
| *'''''ListFileInDir''''' List all the files in a specified directory
| |
| *'''''OpenTCPSocket''''' Open a TCP/IP socket
| |
| *'''''Randomize''''' Create a random number
| |
| *'''''Run''''' Execute a program in a thread
| |
| *'''''Sequence''''' Create a sequence of numbers
| |
| *'''''Set''''' Assign a value to a variable
| |
| *'''''SetApp''''' Assign a variable to an Application defined by the Application Wrapper
| |
| *'''''SetAppOption''''' Assign a value to a predefined option of a program
| |
| *'''''SendTCP''''' Send a message via TCP socket
| |
| *'''''Sin''''' Evaluate the sin() function
| |
| *'''''WriteFile''''' Write variables into a file
| |
| | |
| ==How to use each command:==
| |
| # AppendFile - Add a string to the end of a file
| |
| | |
| '''AppendFile( <filename> <value1> <value2> ... )'''
| |
| | |
| The first parameter is the name of the file and all the others parameters will be added at the end of this file.
| |
| | |
| '''Example :'''
| |
| sequence(seq 1 3 1)
| |
| foreach(value ${seq})
| |
| appendFile('C:/bmtest.txt' 'value: ${value}\n')
| |
| endforeach(value)
| |
| | |
| This script will add the following strings at the end of the file entitled "C:/bmtest.txt" :
| |
| | |
| "value: 1"
| |
| | |
| "value: 2"
| |
| | |
| "value: 3"
| |
| | |
| | |
| ===CloseTCPSocket - Close a TCP/IP socket===
| |
| | |
| '''CloseTCPSocket( <SocketName> )'''
| |
| | |
| '''Example :'''
| |
| CloseTCPSocket(MySocket)
| |
| | |
| | |
| ===DashboardExperiment - Specify the encrypted name of the experiment to report on===
| |
| | |
| '''DashboardExperiment( <encryptedExperiment> )'''
| |
| | |
| The encryptedExperiment is given when creating a new experiment online (this requires a login/pass)
| |
| | |
| '''Example :'''
| |
| DashboardExperiment( 7YF04vELWW4m1B88t)
| |
| | |
| | |
| ===DashboardHost - Specify the hostname of the central database manager===
| |
| | |
| '''DashboardHost( <hostname> )'''
| |
| | |
| '''Example :'''
| |
| DashboardHost(www.kitware.com)
| |
| | |
| = Distributed Computing =
| |
| | |
| = BatchBoards =
| |
