[ITK] Problems reading .mha with SimpleITK

Bradley Lowekamp blowekamp at mail.nih.gov
Wed May 6 12:00:56 EDT 2015


Hello,

Do you have a link to the data?

Why do you say it is all zeros? Did you run StatisticsImageFilter on it? What is the exact line you are using to read it?

Brad

On May 6, 2015, at 11:46 AM, Lopez Saratxaga, Cristina <Cristina.Lopez at tecnalia.com> wrote:

> Dear all,
>  
> I’m the default image reading method of SimpleITK to read a .mha image of an old MICCAI-BRATS dataset. I don’t receive any error in the Execute function, however the image array is just a zeros matrix. I don’t have this problem when reading other .mha images.
>  
> If I open the file with 3DSlicer or Volview I can see that the file is OK, since I can see and navigate through the volume.
>  
> What could be happening? I got the impression that is a silly questions, but it’s driving me crazy…
>  
> Thanks a lot in advance.
>  
> Kind regards,
>  
> Cristina
>  
> _______________________________________________
> Community mailing list
> Community at itk.org
> http://public.kitware.com/mailman/listinfo/community

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://public.kitware.com/pipermail/community/attachments/20150506/3822d07c/attachment.html>


More information about the Community mailing list