[vtkusers] Ideas on how to debug a cross compiled program that used VTK
Paul Douglas Hahn
pdhahn at compintensehpc.com
Sat Jun 2 07:46:00 EDT 2018
Speaking generally, stack frames 7 + 6 are nonsense indicating that
there is a link issue or a memory trasher involved (my guess).
On 06/02/2018 02:52 AM, Guillaume Jacquenot wrote:
> Hello VTK developpers and users,
>
> I am doing cross compilation with docker dockcross for a fortran
> program using VTK. Target is a static windows 64 bit program, which is
> about 43 MB.
>
> - Without cross compilation, program works fine.
> - With cross compilation, program works fine when launched with wine
> in a debian
> - With cross compilation, program seems works fine on Windows, but
> throws error messages on error output: Program received signal
> SIGSEGV, Segmentation fault. This error is thrown even if the program
> just prints help and does nothing (no use of VTK code).
>
> If I disable the VTK part of my program, error goes away. (VTK part =
> VTK library+ my wrapping Fortran code to call VTK with pointer storage
> to keep track of vtkSmartPointer). I use other libraries that work fine.
>
>
> I don't know if it is related to VTK, but when I use gdb on Windows ,
> I get some VTK stuff appearing (See below).
>
> If anyone has a clue on how I can track this down? From the log, can
> we say it that error is mine or comes from cross compilation? Maybe I
> should use valgrind to see if everything really works fine with.
>
> I have tried with the static VTK 6.3 version provided by mxe, and a
> personal static compilation of VTK 8.1.1.
>
> Thanks for reading till this point and here comes the interesting thing:
>
> build_windows>gdb testing.exe
> GNU gdb (GDB) 7.8.1
> Copyright (C) 2014 Free Software Foundation, Inc.
> License GPLv3+: GNU GPL version 3 or later
> <http://gnu.org/licenses/gpl.html>
> This is free software: you are free to change and redistribute it.
> There is NO WARRANTY, to the extent permitted by law. Type "show
> copying"
> and "show warranty" for details.
> This GDB was configured as "x86_64-w64-mingw32".
> Type "show configuration" for configuration details.
> For bug reporting instructions, please see:
> <http://www.gnu.org/software/gdb/bugs/>.
> Find the GDB manual and other documentation resources online at:
> <http://www.gnu.org/software/gdb/documentation/>.
> For help, type "help".
> Type "apropos word" to search for commands related to "word"...
> Reading symbols from testing.exe...done.
> (gdb) r
> Starting program: testing.exe
> [New Thread 11212.0x362c]
> warning: Could not load shared library symbols for
> C:\windows\system32\kernel64.dll.
> Do you need "set solib-search-path" or "set sysroot"?
>
> Test module initialized
>
> . : successful assert, F : failed assert
>
> ..........................................
> Program received signal SIGSEGV, Segmentation fault.
> 0x0000000077adcff6 in ntdll!RtlEnterCriticalSection () from
> C:\windows\SYSTEM32\ntdll.dll
> (gdb) bt
> #0 0x0000000077adcff6 in ntdll!RtlEnterCriticalSection () from
> C:\windows\SYSTEM32\ntdll.dll
> #1 0x0000000000b95bb6 in
> detail::AtomicOps<8ull>::PreIncrement(detail::AtomicOps<8ull>::atomic_type*)
> ()
> #2 0x0000000000b81b0d in vtkTimeStamp::Modified() ()
> #3 0x0000000000b3a0b1 in vtkObject::Modified() ()
> #4 0x0000000000acdb18 in vtkCollection::~vtkCollection() ()
> #5 0x0000000001417817 in
> vtkObjectFactoryCollection::~vtkObjectFactoryCollection() ()
> #6 0x0000000000b3aa85 in
> vtkObjectFactory::UnRegisterAllFactories() ()
> #7 0x000007feff57908f in wcscspn () from
> C:\windows\system32\msvcrt.dll
> #8 0x00000000021f8348 in ?? ()
> Backtrace stopped: previous frame inner to this frame (corrupt stack?)
> (gdb) bt
>
>
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--
Paul D. Hahn
CompIntense HPC, LLC
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