[vtkusers] confused with vtkProbeFilter
Martin Genet
martin.genet at polytechnique.edu
Fri May 13 19:45:07 EDT 2016
Thanks for your help, Sujin.
What do you mean exactly by "your code works for me"? I sat the arrays
names but am still getting the same behavior: the code runs fine, but I
can't find the interpolated data. Do you know where it is? Thanks again.
Martin
On 13/05/2016 18:53, Sujin Philip wrote:
> Hi Martin,
>
> You need to set names for the point and cell data arrays.
> farray.SetName("pointdata") and farray.SetName("celldata")
>
> after doing that your code works for me.
>
> -Sujin
>
>
> On Fri, May 13, 2016 at 12:16 PM, Martin Genet
> <martin.genet at polytechnique.edu
> <mailto:martin.genet at polytechnique.edu>> wrote:
>
> Dear everyone:
>
> Sorry for the triviality, but I'm getting confused with
> vtkProbeFilter: trying to probe an image with a mesh (not the
> opposite: I need the mesh data interpolated onto the image
> points), but can't get it to work.
>
> Consider the following code:
>
> import numpy
> import vtk
>
> image = vtk.vtkImageData()
> image.SetDimensions([3, 3, 1])
> image.SetSpacing(1./numpy.array(image.GetDimensions()))
> image.SetOrigin(numpy.array(image.GetSpacing())/2)
>
> points = vtk.vtkPoints()
> points.InsertNextPoint([1./4, 1./4, 2./4])
> points.InsertNextPoint([3./4, 1./4, 2./4])
> points.InsertNextPoint([3./4, 3./4, 2./4])
> points.InsertNextPoint([1./4, 3./4, 2./4])
>
> cell = vtk.vtkQuad()
> cell.GetPointIds().SetId(0, 0)
> cell.GetPointIds().SetId(1, 1)
> cell.GetPointIds().SetId(2, 2)
> cell.GetPointIds().SetId(3, 3)
>
> cell_array = vtk.vtkCellArray()
> cell_array.InsertNextCell(cell)
>
> ugrid = vtk.vtkUnstructuredGrid()
> ugrid.SetPoints(points)
> ugrid.SetCells(vtk.VTK_QUAD, cell_array)
>
> farray = vtk.vtkFloatArray()
> farray.SetNumberOfComponents(1)
> farray.SetNumberOfTuples(1)
> farray.SetTuple1(0, 2.)
> ugrid.GetCellData().AddArray(farray)
>
> farray = vtk.vtkFloatArray()
> farray.SetNumberOfComponents(1)
> farray.SetNumberOfTuples(4)
> farray.SetTuple1(0, 2.)
> farray.SetTuple1(2, 2.)
> farray.SetTuple1(3, 2.)
> farray.SetTuple1(4, 2.)
> ugrid.GetPointData().AddArray(farray)
>
> probe = vtk.vtkProbeFilter()
> if (vtk.vtkVersion.GetVTKMajorVersion() >= 6):
> probe.SetInputData(image)
> probe.SetSourceData(ugrid)
> else:
> probe.SetInput(image)
> probe.SetSource(ugrid)
> probe.Update()
> probed_image = probe.GetOutput()
>
>
> Problem is: probed_image contains only one array, called
> vtkValidPointMask, but no interpolated data.
>
> If I do:
>
> probed_scalars =
> probed_image.GetPointData().GetArray("vtkValidPointMask")
> for k_voxels in xrange(probed_scalars.GetNumberOfTuples()):
> print probed_scalars.GetTuple1(k_voxels)
>
> I'm getting:
>
> 0.0
> 0.0
> 0.0
> 0.0
> 1.0
> 0.0
> 0.0
> 0.0
> 0.0
>
> So I'm guessing the filter is able to figure out which image point
> lies within the mesh and which does not, but I can't find the
> interpolated data? Any help would be super appreciated. Thanks!
>
> Martin
>
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