[vtkusers] Can a VTK file consists of Points only

Hayden Smith s_hayden_28 at yahoo.com
Fri Apr 26 07:38:23 EDT 2013


Hi,
    I have changed to point index instead of: 1            0.00         0.00         0.00 to 1 0. I still get error reading cell data. But it still does not work. Another thing about CELL_TYPES. I need some clarification. If a cell has 4 vertices, I found it is written 9; 3 vertices 5, please clarify a bit about that.
 
I have again attached my modofied vtk file.
 
/**************************/# vtk DataFile Version 1.0
track data of XX well
ASCII
DATASET POLYDATA
POINTS 10 float
0.00         0.00         0.00
0.00         0.00      1400.00
0.00         0.48      1466.00
0.50         2.34      1600.00
2.68         4.17      1800.00
5.53         4.68      2000.00
9.15         4.36      2200.00
12.02         1.95      2400.00
8.68        -0.86      2599.96
-1.14         4.81      2799.95
VERTICES 10 10
0             0.00         0.00         0.00
1              0.00         0.00      1400.00
2             0.00         0.48      1466.00
3             0.50         2.34      1600.00
4             2.68         4.17      1800.00
5             5.53         4.68      2000.00
6              9.15         4.36      2200.00
7             12.02         1.95      2400.00
8    8.68        -0.86      2599.96
9            -1.14         4.81      2799.95
 
CELLS 10 10
1            0
1             1
1            2
1             3
1            4
1             5
1            6
1            7
1            8
1             9
CELL_TYPES 10
 
 
/***************************/

Thanks,
Hayden
 

________________________________
 From: Marco Nawijn <nawijn at gmail.com>
To: Hayden Smith <s_hayden_28 at yahoo.com> 
Cc: Hal Canary <hal at cs.unc.edu>; "vtkusers at vtk.org" <vtkusers at vtk.org> 
Sent: Friday, April 26, 2013 12:18 AM
Subject: Re: [vtkusers] Can a VTK file consists of Points only
  


Hi,

I have not worked with the ASCII  VTK format, but looking at it I suspect that you have to drop the coordinates in the CELLS section and use point indices instead, so instead of: 
1            0.00         0.00         0.00

it should probably read:

1 0

The 1 means that for the definition of the cell you need one cell point. The 0 is the index to the cell point. 

If you have access to Python with the VTK bindings, I highly recommend you to use that. You can easily build an in-memory grid and export it to a VTK file. 

If you need a working example, drop me an e-mail and I will send you one. 

Marco







On Fri, Apr 26, 2013 at 6:12 AM, Hayden Smith <s_hayden_28 at yahoo.com> wrote:

Hello,
>   Thank you very much for the reply. Could you tell me what is the problem with the following vtk file, why it shows error reading cell data? 
> 
>/**************************************************/# vtk DataFile Version 1.0
>track data of XX well
>ASCII
>DATASET POLYDATA
>POINTS 10 float
>0.00         0.00         0.00
>0.00         0.00      1400.00
>0.00         0.48      1466.00
>0.50         2.34      1600.00
>2.68         4.17      1800.00
>5.53         4.68      2000.00
>9.15         4.36      2200.00
>12.02         1.95      2400.00
>8.68        -0.86      2599.96
>-1.14         4.81      2799.95
>VERTICES 10 10
>0   0.00         0.00         0.00
>1   0.00         0.00      1400.00
>2            0.00         0.48      1466.00
>3            0.50         2.34      1600.00
>4            2.68         4.17      1800.00
>5            5.53         4.68      2000.00
>6            9.15         4.36      2200.00
>7  12.02         1.95      2400.00
>8            8.68        -0.86      2599.96
>9            -1.14         4.81      2799.95
> 
>CELLS 10 10
>1            0.00         0.00         0.00
>1            0.00         0.00      1400.00
>1             0.00         0.48      1466.00
>1             0.50         2.34      1600.00
>1             2.68         4.17      1800.00
>1            5.53         4.68      2000.00
>1            9.15         4.36      2200.00
>1            12.02         1.95      2400.00
>1            8.68        -0.86      2599.96
>1    -1.14         4.81      2799.95
>CELL_TYPES 10
> 
> 
> 
>/***************************************************/
>Thanks,
>Hayden
> 
> From: Hal Canary <hal at cs.unc.edu>
>To: vtkusers at vtk.org 
>Sent: Thursday, April 25, 2013 9:21 PM
>Subject: Re: [vtkusers] Can a VTK file consists of Points only
>  
>
>On 04/25/2013 10:08 PM, Hal Canary wrote:
>> On 04/25/2013 10:04 PM, Hayden Smith wrote:
>>>       I have a set of points which I would like to use to make a VTK
>>> file. As there are several formals, which formats will be suitable. I
>>> used Poydata type only with points. But I can't display the points.
>>> Please provide me suggestions.
>> 
>> Add a cell array for the vertices. vtkMaskPoints can do that.
>
>Here's an example:
>
>#!/usr/bin/env python
>import vtk
>fileName = '/tmp/in.csv'
>outFileName = '/tmp/out.vtp'
>with open(fileName,'r') as f:
>    columns = f.readline().strip().split(',')
>reader = vtk.vtkDelimitedTextReader()
>reader.SetFileName(fileName)
>reader.SetFieldDelimiterCharacters(",")
>reader.DetectNumericColumnsOn()
>reader.SetHaveHeaders(True)
>reader.Update()
>numberOfRows =
 reader.GetOutput().GetNumberOfRows()
>tableToPolyData = vtk.vtkTableToPolyData()
>tableToPolyData.SetInputConnection(reader.GetOutputPort())
>tableToPolyData.SetXColumn(columns[0])
>tableToPolyData.SetYColumn(columns[1])
>tableToPolyData.SetZColumn(columns[2])
>try:
>    tableToPolyData.PreserveCoordinateColumnsAsDataArraysOn();
>except:
>    pass # introduced in 5.10?
>maskPoints = vtk.vtkMaskPoints()
>maskPoints.SetInputConnection(tableToPolyData.GetOutputPort())
>maskPoints.SetOnRatio(1)
>maskPoints.RandomModeOff()
>maskPoints.SetMaximumNumberOfPoints(numberOfRows)
>maskPoints.GenerateVerticesOn()
>maskPoints.SingleVertexPerCellOn()
>writer =
 vtk.vtkXMLPolyDataWriter()
>writer.SetInputConnection(maskPoints.GetOutputPort())
>writer.SetFileName(outFileName)
>writer.Write()
>###############
>x,y,z,v
>0,0,0,2
>0,0,1,3
>0,1,0,4
>0,1,1,5
>1,0,0,6
>1,0,1,7
>1,1,0,8
>1,1,1,9
>
>
>
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