[vtkusers] [ParaViewWeb] compile problem with class vtkJPEGWriter and function SetInput

Sebastien Jourdain sebastien.jourdain at kitware.com
Thu Apr 19 09:30:40 EDT 2012 

Try to stop all the services (tomcat + activemq). Remove all the logs
of tomcat and the one that are inside WORK_DIR/logs that you setup in
CMake and that is specified inside the pw-config.propertie.

Once done, start again activemq and tomcat. Test again and if it
fails, you will have to look at all those logs to see if you have any
feedback of the reason of the issue...

Seb

On Thu, Apr 19, 2012 at 4:43 AM, Tuan Ha Tran <tuan-ha.tran at insa-lyon.fr> wrote:
> Seb,
> All theses problems are gone, but now, the latest :
> When I tried to create a new session, now nothing appears, and I have, in my
> "Apache-activemq" shell "INFO | Transport failed: java.io.EOFException"
> If you can help me ..... thank you very much indeed
>
>
>
>
> ----- Original Message -----
> From: Sebastien Jourdain <sebastien.jourdain at kitware.com>
> To: Tuan Ha Tran <tuan-ha.tran at insa-lyon.fr>
> Cc: vtkusers at vtk.org, Frederic Cervenansky
> <frederic.cervenansky at creatis.insa-lyon.fr>
> Sent: Wed, 18 Apr 2012 19:01:48 +0200 (CEST)
> Subject: Re: [vtkusers] [ParaViewWeb] compile problem with class
> vtkJPEGWriter and function SetInput
>
> What do you mean by "my apache-tomcat-7.0.26" ?
> If it's a tgz file that you download with your user, you DO NOT HAVE
> TO read the documentation
> "http://www.paraview.org/Wiki/ParaViewWeb_with_system_tomcat_package"
>
> By system tomcat, I mean: "apt-get install tomcat"
> And with system tomcat, it is trickier to install ParaViewWeb due to
> security reason... (class path, security grant...)
> That's why a custom read me is provided otherwise, you just setup a
> path where you want tomcat to write its data and that's it...
>
> Seb
>
>
> On Wed, Apr 18, 2012 at 12:52 PM, Sebastien Jourdain
> wrote:
>> How did you installed tomcat ?
>>
>> Seb
>>
>> On Wed, Apr 18, 2012 at 11:59 AM, Tuan Ha Tran
>> wrote:
>>> So the result is "No", always the same error.
>>> Yes, another information : I didn't find any file named
>>>              /etc/init.d/tomcat6,
>>>              /var/lib/tomcat6/conf/policy.d/03catalina.policy,
>>>              /var/lib/tomcat6/conf/policy.d/04webapps.policy
>>> so I went to conf folder in my apache-tomcat-7.0.26 and added all in
>>> "catalina.policy"
>>>
>>>
>>>
>>> ----- Original Message -----
>>> From: Tuan Ha Tran
>>> To: Sebastien Jourdain
>>> Cc: vtkusers at vtk.org, Frederic Cervenansky
>>>
>>> Sent: Wed, 18 Apr 2012 17:53:48 +0200 (CEST)
>>> Subject: Re: [vtkusers] [ParaViewWeb] compile problem with class
>>> vtkJPEGWriter and function SetInput
>>>
>>> Thank you for your reponse.
>>> As I said, I followed the tutorial in the
>>> "http://www.paraview.org/Wiki/ParaViewWeb_with_system_tomcat_package"
>>>
>>> cd ..
>>> chown -R tomcat6 paraviewweb-work
>>> chgrp -R tomcat6 paraviewweb-work
>>>
>>>
>>> And, the right is set to tomcat (because there is an error "no user named
>>> tomcat6") (I don't know if we can use root)
>>> However, I will try with root and we'll see.
>>> Thank again Seb
>>>
>>>
>>> ----- Original Message -----
>>> From: Sebastien Jourdain
>>> To: Tuan Ha Tran
>>> Cc: vtkusers at vtk.org, Frederic Cervenansky
>>>
>>> Sent: Wed, 18 Apr 2012 17:31:51 +0200 (CEST)
>>> Subject: Re: [vtkusers] [ParaViewWeb] compile problem with class
>>> vtkJPEGWriter and function SetInput
>>>
>>> Hi Tuan,
>>>
>>> Those your local tomcat that run under your user has the right to
>>> write in that directory ?
>>>
>>> /var/lib/tomcat6/paraviewweb-work/ ?
>>>
>>> Seb
>>>
>>> On Wed, Apr 18, 2012 at 11:10 AM, Tuan Ha Tran
>>> wrote:
>>>> Hi Seb,
>>>>     I have another thing to ask you (I'm sorry if this question is
>>>> already
>>>> asked, but I found my problem different)
>>>>     I use super build to build ParaViewWeb with all the settings by
>>>> default.
>>>> It's done.
>>>>
>>>>     Next :
>>>>     - I downloaded the apache-tomcat-7.0.26
>>>>     - Copied all the *.war generated by the SuperBuild into
>>>> tomcat7.0.26's
>>>> webapps folder
>>>>     - Copied pw-config.properties into apache-tomcat-7.0.26/lib
>>>>
>>>>     To run PWApps,
>>>>     - I started JMS broker d4apache Activemq, the latest version is
>>>> 5.5.1
>>>> (./activemq-admin start)
>>>>     - I started server Tomcat (./catalina.sh start)
>>>>
>>>>     Result: when I tried to open a session in PWApps @
>>>> http://localhost:8080/PWApp/
>>>>     the error appeared : An error occured during the loading.
>>>> org.hibernate.exception.GenericJDBCException: Cannot open connection
>>>>
>>>>
>>>>     It's absolutely a problem with hibernate, the connection with the
>>>> database. But I don't quite understand how to fix this.
>>>>     Do we have to modify pw-config.properties? What do we have to do?
>>>>
>>>>     About the working directory, I followed the tutorial @
>>>> http://www.paraview.org/Wiki/ParaViewWeb_with_system_tomcat_package.
>>>>     Thank you for your help.
>>>>
>>>>
>>>> ********************************************************************
>>>> ***************** pw-config.properties
>>>> **********************************
>>>> ********************************************************************
>>>>
>>>> # Directory used to store application files
>>>> pw.working.directory=/var/lib/tomcat6/paraviewweb-work/
>>>>
>>>> # Logging level that should be used [DEBUG, INFO, WARNING, ERROR,
>>>> CRITICAL]
>>>> pw.logging.level=ERROR
>>>>
>>>> # Do we enable logging [on, off, yes, no]
>>>> paraview.logging=OFF
>>>> pw.logging=ON
>>>>
>>>> # Inactivity timeout for garbage collecting PWServer applications
>>>> # time is given in minute
>>>> pw.garbage.collector.timeout=5
>>>>
>>>> # Administration page user credentials
>>>> pw.admin.login=admin
>>>> pw.admin.password=admin
>>>>
>>>> # Total number of resources available
>>>> pw.max.resources=5
>>>>
>>>> # PWServer executable path settings
>>>>
>>>>
>>>> pw.executable.path.default=/var/lib/tomcat6/paraviewweb-work/bin/PWServer.sh
>>>> #
>>>>
>>>>
>>>> pw.executable.path.parallel=/home/thtran/projects/ParaViewWeb/install-pw/bin/PWServer
>>>> # pw.executable.path.manta=/home/seb/tmp/ParaWeb-work/exec/manta.sh
>>>>
>>>> # pvserver executable path settings
>>>> # pvserver.executable.path.demo=/home/seb/tmp/ParaWeb-work/exec/demo.sh
>>>>
>>>> # Plugin directory settings
>>>> pw.plugins.default=/var/lib/tomcat6/paraviewweb-work/plugins
>>>> # pw.plugins.parallel=/usr/local/PVW/PWSer_WD/plugins
>>>> # pw.plugins.manta=/usr/local/PVW/PWSer_WD/plugins
>>>>
>>>> # Resource consumption definition
>>>> pw.resource.consumption.default=1
>>>> # pw.resource.consumption.parallel=4
>>>> # pw.resource.consumption.manta=2
>>>>
>>>> # Optional thirdpart properties
>>>> pw.gwt-app.data=/var/lib/tomcat6/paraviewweb-work/data
>>>> pw.gwt-app.states=/var/lib/tomcat6/paraviewweb-work/states
>>>> # pw.gwt-app.webgl=/usr/local/PVW/PWSer_WD/webgl
>>>> pw.gwt-app.confs=default
>>>> # Optional PWApp upload properties
>>>> # - size in MegaBytes
>>>> # - timeout in minute
>>>> # - types provides the set of extension allowed
>>>> pw.gwt-app.upload.size=10
>>>> pw.gwt-app.upload.timeout=2
>>>> pw.gwt-app.upload.types=vtp:vtk
>>>>
>>>> # Remote server command line
>>>> #  * Tomcat will call any script in the following directory and will
>>>> execute
>>>> the
>>>> #    following command line where portnumber is an available portnumber:
>>>> #       > fullScriptPath username password
>>>> #  * Documentation on How to start a pvserver
>>>> #    - http://www.cmake.org/Wiki/Setting_up_a_ParaView_Server
>>>> # pw.remote.settings=/usr/local/PVW/PWSer_WD/remote-settings
>>>>
>>>> pw.remote.log.dir=/var/lib/tomcat6/paraviewweb-work/logs
>>>>
>>>> # Optional PWStateApp working directory
>>>>
>>>>
>>>> pw.state.working.directory=/var/lib/tomcat6/paraviewweb-work/states-workdir
>>>>
>>>> ***********************************************************
>>>> ************ end of pw-config.properties*************************
>>>> ***********************************************************
>>>>
>>>>
>>>> ----- Original Message -----
>>>> From: Sebastien Jourdain
>>>> To: Tuan Ha Tran
>>>> Cc: vtkusers at vtk.org
>>>> Sent: Fri, 06 Apr 2012 19:33:40 +0200 (CEST)
>>>> Subject: Re: [vtkusers] [ParaViewWeb] compile problem with class
>>>> vtkJPEGWriter and function SetInput
>>>>
>>>> You should use ParaView 3.14.
>>>>
>>>> I'm sure you are doing something wrong that I'm not aware of, because
>>>> I'm using ParaViewWeb with ParaView 3.14 myself. So if I managed to
>>>> build it, you should too, unless we are doing something different.
>>>>
>>>> What did you do with the SuperBuild ? Did it manage to fetch ParaView
>>>> and ParaViewWeb and start building those as well as their dependency
>>>> like apr ?
>>>>
>>>> Seb
>>>>
>>>> On Fri, Apr 6, 2012 at 11:04 AM, Tuan Ha Tran wrote:
>>>>> Hi,
>>>>>  I tried your solution with SuperBuild but the problem still exist.
>>>>>  I wonder if I should reuse ParaView 3.10.1?
>>>>>
>>>>>  Thank you Seb
>>>>>
>>>>> ----- Original Message -----
>>>>> From: "Sebastien Jourdain"
>>>>> To: "Tuan Ha Tran"
>>>>> Cc: vtkusers at vtk.org
>>>>> Sent: Friday, April 6, 2012 4:53:43 PM
>>>>> Subject: Re: [vtkusers] [ParaViewWeb] compile problem with class
>>>>> vtkJPEGWriter and function SetInput
>>>>>
>>>>> Hi Tuan Ha Tran,
>>>>>
>>>>> The documentation was written when ParaView 3.10 was out and that
>>>>> version was lacking some fixed that were on git/master at that time
>>>>> but I should definitely update the documentation to recommend to use
>>>>> ParaView 3.14 and not git/master.
>>>>> In fact, two weeks ago the latest changes in VTK that breaks its
>>>>> backward compatibility went into ParaView and for which I didn't get
>>>>> the time to update ParaViewWeb.
>>>>>
>>>>> Regarding your ParaView build issue, I'm wondering what you did... But
>>>>> anyway, if you want to ease the build process, you should definitely
>>>>> try to use the SuperBuild package so every third party get
>>>>> automatically compiled for you with the correct arguments and options.
>>>>>
>>>>> http://www.paraview.org/Wiki/ParaViewWeb_SuperBuild
>>>>>
>>>>> Seb
>>>>>
>>>>> On Fri, Apr 6, 2012 at 9:25 AM, Tuan Ha Tran wrote:
>>>>>> Seb,
>>>>>> Thank you for your reply. I just followed the instructions in the
>>>>>> ParaViewWeb site.
>>>>>> - Mkdir ParaViewWeb
>>>>>> - Clone git from it address
>>>>>>
>>>>>> I used the Ccmake command (in build-pw) for the source in the
>>>>>> ParaViewWeb
>>>>>> directory (build-pw is a sub-directory of ParaViewWeb). I compiled and
>>>>>> then
>>>>>> the errors.
>>>>>> I used the latest release (3.14) of ParaView.
>>>>>>
>>>>>> there was a problem with ParaView, it is the problem of share library.
>>>>>> but I resolved this by adding -fPIC in the CFLAGS and CXXFLAGS, I
>>>>>> don't
>>>>>> know
>>>>>> if that is the problem.
>>>>>>
>>>>>> so, the vtkJPEGWriter is in the ParaView folder?
>>>>>>
>>>>>> Thank you once more.
>>>>>>
>>>>>> ----- Original Message -----
>>>>>> From: "Sebastien Jourdain"
>>>>>> To: "Tuan Ha Tran"
>>>>>> Cc: vtkusers at vtk.org
>>>>>> Sent: Friday, April 6, 2012 3:11:17 PM
>>>>>> Subject: Re: [vtkusers] [ParaViewWeb] compile problem with class
>>>>>> vtkJPEGWriter and function SetInput
>>>>>>
>>>>>> Hi Tuan Ha Tran,
>>>>>>
>>>>>> how did you build ParaViewWeb ? Did you do from the super build or
>>>>>> from the main repository ?
>>>>>> ParaViewWeb basically rely on ParaView that embed VTK which embed that
>>>>>> vtkJPEGWriter.cxx
>>>>>> Which version of ParaView did you used ? The latest release (3.14) is
>>>>>> known to work...
>>>>>>
>>>>>> Seb
>>>>>>
>>>>>>
>>>>>> On Fri, Apr 6, 2012 at 5:12 AM, Tuan Ha Tran wrote:
>>>>>>> Hi everybody,
>>>>>>>   I have a problem when trying to compile ParaViewWeb
>>>>>>>   This is the detail of my problem
>>>>>>>
>>>>>>>
>>>>>>> ***********************************************************************
>>>>>>> %] Built target ParaWebPlugin
>>>>>>> Scanning dependencies of target PWServer
>>>>>>> [ 30%] Building CXX object
>>>>>>> ParaViewAdapter/CMakeFiles/PWServer.dir/vtkPWProcessingEngine.cxx.o
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> /home/thtran/projects/ParaViewWeb/ParaViewAdapter/vtkPWProcessingEngine.cxx:
>>>>>>> In member function ‘double
>>>>>>> vtkPWProcessingEngine::ProcessAndSendImage(const
>>>>>>> char*, vtkImageData*)’:
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> /home/thtran/projects/ParaViewWeb/ParaViewAdapter/vtkPWProcessingEngine.cxx:439:19:
>>>>>>> error: ‘class vtkJPEGWriter’ has no member named ‘SetInput’
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> /home/thtran/projects/ParaViewWeb/ParaViewAdapter/vtkPWProcessingEngine.cxx:448:18:
>>>>>>> error: ‘class vtkPNGWriter’ has no member named ‘SetInput’
>>>>>>> make[2]: ***
>>>>>>> [ParaViewAdapter/CMakeFiles/PWServer.dir/vtkPWProcessingEngine.cxx.o]
>>>>>>> Error
>>>>>>> 1
>>>>>>> make[1]: *** [ParaViewAdapter/CMakeFiles/PWServer.dir/all] Error 2
>>>>>>> make: *** [all] Error 2
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> *************************************************************************
>>>>>>>
>>>>>>> When I went to the "wtkPWProcesingEngine.cxx", I found out that
>>>>>>> wtkJPEGWriter is included by #include vtkJPEGWriter.h". But I
>>>>>>> couldn't
>>>>>>> find
>>>>>>> wtkJPEGWriter.h neither vtkJPEGWriter.cxx.
>>>>>>>
>>>>>>> When I tried to look for vtkJPEGWriter.cxx by Google, I found this
>>>>>>> file
>>>>>>> but I couldn't find any function "SetInput".
>>>>>>>
>>>>>>> When I tried to deactivate the line where SetInput is located,
>>>>>>> ParaViewWeb compile, but I think there are some problems with it.
>>>>>>>
>>>>>>> I want to know if someone has the same problem? How to fix that?
>>>>>>> Thank you all.
>>>>>>>
>>>>>>> Ha
>>>>>>>
>>>>>>>
>>>>>>>
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>

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