[vtkusers] Weird java errors
Sebastien Jourdain
sebastien.jourdain at kitware.com
Wed Feb 16 22:22:29 EST 2011
Hi Jonathan,
what is basically calling those methods ? Is it something that has
been triggered by the UI or is it something that come from the main
thread ? To prevent this concurrency issue, those methods should be
called in the EDT (Event Dispatch Thread) which manage the rendering.
To make sure you are launching them in the EDT you can use the methods
of the SwingUtilities invokeLater or invokeAndWait.
Hope this helps,
Seb
On Wed, Feb 16, 2011 at 6:25 PM, Jonathan Morra <jonmorra at gmail.com> wrote:
> I'm using VTK 5.9 wrapped in Java and am seeing two very weird errors that
> aren't reproducible. My application involves moving through planes in CT
> data. While I am doing this I run both marching cubes and marching squares.
> While doing this sometimes (it happens intermittently, but causes the whole
> JRE to crash). I get the following error message for vtkMarchingSquares and
> vtkMarchingCubes. Where for vtkMarchingSquares, this is the contents of the
> method that throws an exception
> private vtkPolyData doMarchingSquares(vtkImageData binaryOrgan, int[]
> extent) {
> vtkMarchingSquares marching = new vtkMarchingSquares();
> marching.SetInput(binaryOrgan);
> marching.SetImageRange(extent);
> marching.SetValue(0, 1);
> marching.Update();
> vtkPolyData marchingOutput = marching.GetOutput();
> return marchingOutput;
> }
> and for vtkMarchingCubes this is the content of the method that throws an
> exception
> private vtkPolyData doMarchingCubes(vtkImageData binaryData) {
> vtkMarchingCubes marching = new vtkMarchingCubes();
> marching.SetInput(binaryData);
> marching.ComputeGradientsOff();
> marching.ComputeNormalsOff();
> marching.ComputeScalarsOff();
> marching.SetValue(0, 0.5);
> marching.Update();
> vtkPolyData marchingOutput = marching.GetOutput();
> return marchingOutput;
> }
> Since it happens intermittently, I think it must be a threading issue, but I
> have not idea how to debug/fix it.
> Here is what Java produces for the vtkMarchingSquares error.
> #
> # A fatal error has been detected by the Java Runtime Environment:
> #
> # EXCEPTION_ACCESS_VIOLATION (0xc0000005) at pc=0x000007feea7a7201,
> pid=5756, tid=3824
> #
> # JRE version: 6.0_18-b07
> # Java VM: Java HotSpot(TM) 64-Bit Server VM (16.0-b13 mixed mode
> windows-amd64 )
> # Problematic frame:
> # C [vtkCommon.dll+0x67201]
> #
> # If you would like to submit a bug report, please visit:
> # http://java.sun.com/webapps/bugreport/crash.jsp
> # The crash happened outside the Java Virtual Machine in native code.
> # See problematic frame for where to report the bug.
> #
> --------------- T H R E A D ---------------
> Current thread (0x000000004cd88800): JavaThread "AWT-EventQueue-0"
> [_thread_in_native, id=3824, stack(0x000000004dfa0000,0x000000004e0a0000)]
> siginfo: ExceptionCode=0xc0000005, reading address 0x0000000000000000
> Registers:
> EAX=0x0000000051a59170, EBX=0x0000000000000000, ECX=0x0000000000000000,
> EDX=0x0000000000000007
> ESP=0x000000004e09e410, EBP=0x0000000000000007, ESI=0x000000006e9861d0,
> EDI=0x000000005a827750
> EIP=0x000007feea7a7201, EFLAGS=0x0000000000010287
> Top of Stack: (sp=0x000000004e09e410)
> 0x000000004e09e410: 0000000091966150 000007feea7a8ef9
> 0x000000004e09e420: 0000000091965e90 0000000000000000
> 0x000000004e09e430: 000000004c94aad0 000007feea7a864b
> 0x000000004e09e440: 000000006ebbf5c0 000000005179a220
> 0x000000004e09e450: 0000000000000000 000000004bb10278
> 0x000000004e09e460: 000000006e9861d0 000000005a827750
> 0x000000004e09e470: 000000005179a220 0000000000000000
> 0x000000004e09e480: fffffffffffffffe 00000000919e7390
> 0x000000004e09e490: 0000000000000000 000007feea5bc9da
> 0x000000004e09e4a0: 000000004c94aad0 00000000ffffffff
> 0x000000004e09e4b0: 0000000091965f90 000000005179a220
> 0x000000004e09e4c0: 0000000091965e90 0000000077c31468
> 0x000000004e09e4d0: 0000000000000000 000007fe00000001
> 0x000000004e09e4e0: 0000000000000000 fffffffffffffffe
> 0x000000004e09e4f0: fffffffffffffffe 0000000091877d50
> 0x000000004e09e500: 0000000000000000 000007feea496061
> Instructions: (pc=0x000007feea7a7201)
> 0x000007feea7a71f1: 48 8b 57 20 48 8b 03 48 8b cb 48 89 04 ea eb 27
> 0x000007feea7a7201: 48 8b 0b 48 85 c9 74 28 0f 1f 80 00 00 00 00 48
>
> Stack: [0x000000004dfa0000,0x000000004e0a0000], sp=0x000000004e09e410,
> free space=3f90000000000000000k
> Native frames: (J=compiled Java code, j=interpreted, Vv=VM code, C=native
> code)
> C [vtkCommon.dll+0x67201]
> Java frames: (J=compiled Java code, j=interpreted, Vv=VM code)
> j vtk.vtkAlgorithm.Update_52()V+0
> j vtk.vtkAlgorithm.Update()V+1
> j
> data.OrthoDataManager.doMarching(Lvtk/vtkImageData;[I)Lvtk/vtkPolyData;+25
> j
> data.OrthoDataManager.getContoursAtSlice(Lvtk/vtkImageData;II)Lvtk/vtkPolyData;+72
> j
> data.OrthoDataManager.getContoursAtSlice(Ljava/lang/String;ILvtk/vtkRenderWindowInteractor;I)Ljava/util/HashSet;+90
> j viewer.OrthoPanel.view(Ljava/lang/String;ZZ)V+113
> j viewer.OrthoFrame.view(Ljava/lang/String;ZZ)V+36
> j viewer.tools.LeftToolPanel.changeView(Ljava/lang/String;ZZ)V+7
> j
> viewer.tools.LeftToolPanel.handleAction(Ljava/awt/event/ActionEvent;)V+317
> j
> viewer.tools.LeftToolPanel.access$000(Lviewer/tools/LeftToolPanel;Ljava/awt/event/ActionEvent;)V+2
> j
> viewer.tools.LeftToolPanel$1.actionPerformed(Ljava/awt/event/ActionEvent;)V+5
> j
> javax.swing.AbstractButton.fireActionPerformed(Ljava/awt/event/ActionEvent;)V+84
> j
> javax.swing.AbstractButton$Handler.actionPerformed(Ljava/awt/event/ActionEvent;)V+5
> j
> javax.swing.DefaultButtonModel.fireActionPerformed(Ljava/awt/event/ActionEvent;)V+35
> j javax.swing.JToggleButton$ToggleButtonModel.setPressed(Z)V+148
> j
> javax.swing.plaf.basic.BasicButtonListener.mouseReleased(Ljava/awt/event/MouseEvent;)V+35
> j java.awt.Component.processMouseEvent(Ljava/awt/event/MouseEvent;)V+64
> j javax.swing.JComponent.processMouseEvent(Ljava/awt/event/MouseEvent;)V+23
> j java.awt.Component.processEvent(Ljava/awt/AWTEvent;)V+81
> j java.awt.Container.processEvent(Ljava/awt/AWTEvent;)V+18
> j java.awt.Component.dispatchEventImpl(Ljava/awt/AWTEvent;)V+566
> j java.awt.Container.dispatchEventImpl(Ljava/awt/AWTEvent;)V+42
> j java.awt.Component.dispatchEvent(Ljava/awt/AWTEvent;)V+2
> j
> java.awt.LightweightDispatcher.retargetMouseEvent(Ljava/awt/Component;ILjava/awt/event/MouseEvent;)V+320
> j
> java.awt.LightweightDispatcher.processMouseEvent(Ljava/awt/event/MouseEvent;)Z+139
> j java.awt.LightweightDispatcher.dispatchEvent(Ljava/awt/AWTEvent;)Z+50
> j java.awt.Container.dispatchEventImpl(Ljava/awt/AWTEvent;)V+12
> j java.awt.Window.dispatchEventImpl(Ljava/awt/AWTEvent;)V+19
> J java.awt.EventDispatchThread.pumpOneEventForFilters(I)Z
> j
> java.awt.EventDispatchThread.pumpEventsForFilter(ILjava/awt/Conditional;Ljava/awt/EventFilter;)V+30
> j
> java.awt.EventDispatchThread.pumpEventsForHierarchy(ILjava/awt/Conditional;Ljava/awt/Component;)V+11
> j java.awt.EventDispatchThread.pumpEvents(ILjava/awt/Conditional;)V+4
> j java.awt.EventDispatchThread.pumpEvents(Ljava/awt/Conditional;)V+3
> j java.awt.EventDispatchThread.run()V+9
> v ~StubRoutines::call_stub
> --------------- P R O C E S S ---------------
> Java Threads: ( => current thread )
> 0x000000004e631800 JavaThread "Thread-27" [_thread_blocked, id=4176,
> stack(0x0000000055650000,0x0000000055750000)]
> 0x000000004e633000 JavaThread "SwingWorker-pool-4-thread-1" daemon
> [_thread_in_native, id=2300, stack(0x000000006fb80000,0x000000006fc80000)]
> 0x000000004e635000 JavaThread "pool-1-thread-1" [_thread_blocked, id=4852,
> stack(0x000000004d690000,0x000000004d790000)]
> 0x000000004e632800 JavaThread "DestroyJavaVM" [_thread_blocked, id=4268,
> stack(0x0000000002610000,0x0000000002710000)]
> 0x000000004e631000 JavaThread "Thread-9" [_thread_blocked, id=3904,
> stack(0x0000000051120000,0x0000000051220000)]
> 0x000000004e62f800 JavaThread "Timer-2" [_thread_blocked, id=4208,
> stack(0x0000000050e20000,0x0000000050f20000)]
> 0x000000004e62e800 JavaThread "ssh-connection 1" daemon [_thread_blocked,
> id=5896, stack(0x00000000509a0000,0x0000000050aa0000)]
> 0x000000004cf67800 JavaThread "Transport protocol 1" daemon
> [_thread_in_native, id=5080, stack(0x000000004f8d0000,0x000000004f9d0000)]
> 0x000000004e1e7000 JavaThread "TimerQueue" daemon [_thread_blocked,
> id=888, stack(0x000000004f3d0000,0x000000004f4d0000)]
> 0x000000004cf56800 JavaThread "Timer-1" [_thread_blocked, id=6000,
> stack(0x000000004e9a0000,0x000000004eaa0000)]
> 0x000000004b026000 JavaThread "Timer-0" [_thread_blocked, id=4200,
> stack(0x000000004e0a0000,0x000000004e1a0000)]
> =>0x000000004cd88800 JavaThread "AWT-EventQueue-0" [_thread_in_native,
> id=3824, stack(0x000000004dfa0000,0x000000004e0a0000)]
> 0x000000004cb8e000 JavaThread "AWT-Windows" daemon [_thread_in_native,
> id=3756, stack(0x000000004d490000,0x000000004d590000)]
> 0x000000004cb8d800 JavaThread "AWT-Shutdown" [_thread_blocked, id=4612,
> stack(0x000000004d390000,0x000000004d490000)]
> 0x000000004b09a000 JavaThread "Java2D Disposer" daemon [_thread_blocked,
> id=5156, stack(0x000000004d290000,0x000000004d390000)]
> 0x000000004af35800 JavaThread "Low Memory Detector" daemon
> [_thread_blocked, id=5460, stack(0x000000004b7d0000,0x000000004b8d0000)]
> 0x000000004af34000 JavaThread "CompilerThread1" daemon [_thread_blocked,
> id=5276, stack(0x000000004b6d0000,0x000000004b7d0000)]
> 0x000000004af30000 JavaThread "CompilerThread0" daemon [_thread_blocked,
> id=6048, stack(0x000000004b5d0000,0x000000004b6d0000)]
> 0x000000004af1b800 JavaThread "JDWP Command Reader" daemon
> [_thread_in_native, id=4868, stack(0x000000004b4d0000,0x000000004b5d0000)]
> 0x000000004af18000 JavaThread "JDWP Event Helper Thread" daemon
> [_thread_blocked, id=4160, stack(0x000000004b3d0000,0x000000004b4d0000)]
> 0x000000004af12000 JavaThread "JDWP Transport Listener: dt_shmem" daemon
> [_thread_blocked, id=3860, stack(0x000000004b2d0000,0x000000004b3d0000)]
> 0x00000000006f1000 JavaThread "Attach Listener" daemon [_thread_blocked,
> id=1972, stack(0x000000004b1d0000,0x000000004b2d0000)]
> 0x00000000006f0000 JavaThread "Signal Dispatcher" daemon [_thread_blocked,
> id=5240, stack(0x000000004b0d0000,0x000000004b1d0000)]
> 0x00000000006d8000 JavaThread "Finalizer" daemon [_thread_blocked, id=324,
> stack(0x000000004add0000,0x000000004aed0000)]
> 0x00000000006d4000 JavaThread "Reference Handler" daemon [_thread_blocked,
> id=5328, stack(0x000000004acd0000,0x000000004add0000)]
> Other Threads:
> 0x00000000006cf800 VMThread [stack: 0x000000004abd0000,0x000000004acd0000]
> [id=4772]
> 0x000000004af3b800 WatcherThread [stack:
> 0x000000004b8d0000,0x000000004b9d0000] [id=1864]
> VM state:not at safepoint (normal execution)
> VM Mutex/Monitor currently owned by a thread: None
> Heap
> PSYoungGen total 34176K, used 32079K [0x0000000035070000,
> 0x00000000376b0000, 0x000000004a310000)
> eden space 31488K, 93% used
> [0x0000000035070000,0x0000000036d246b0,0x0000000036f30000)
> from space 2688K, 99% used
> [0x0000000037030000,0x00000000372cf5b0,0x00000000372d0000)
> to space 3840K, 0% used
> [0x00000000372f0000,0x00000000372f0000,0x00000000376b0000)
> PSOldGen total 43392K, used 11687K [0x000000000ab10000,
> 0x000000000d570000, 0x0000000035070000)
> object space 43392K, 26% used
> [0x000000000ab10000,0x000000000b679dc8,0x000000000d570000)
> PSPermGen total 48576K, used 23611K [0x0000000005710000,
> 0x0000000008680000, 0x000000000ab10000)
> object space 48576K, 48% used
> [0x0000000005710000,0x0000000006e1ed78,0x0000000008680000)
> Dynamic libraries:
> 0x0000000000400000 - 0x000000000042e000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\java.exe
> 0x0000000077be0000 - 0x0000000077d8c000 C:\Windows\SYSTEM32\ntdll.dll
> 0x00000000779c0000 - 0x0000000077adf000 C:\Windows\system32\kernel32.dll
> 0x000007fefd3c0000 - 0x000007fefd42b000 C:\Windows\system32\KERNELBASE.dll
> 0x000007fefd430000 - 0x000007fefd50b000 C:\Windows\system32\ADVAPI32.dll
> 0x000007fefd860000 - 0x000007fefd8ff000 C:\Windows\system32\msvcrt.dll
> 0x000007feff0b0000 - 0x000007feff0cf000 C:\Windows\SYSTEM32\sechost.dll
> 0x000007fefe8e0000 - 0x000007fefea0e000 C:\Windows\system32\RPCRT4.dll
> 0x000007fefcf30000 - 0x000007fefcf87000 C:\Windows\system32\apphelp.dll
> 0x000007feeea00000 - 0x000007feeea51000
> C:\Windows\AppPatch\AppPatch64\AcGenral.DLL
> 0x000007fefcf00000 - 0x000007fefcf25000 C:\Windows\system32\SspiCli.dll
> 0x000007fefd510000 - 0x000007fefd581000 C:\Windows\system32\SHLWAPI.dll
> 0x000007fefd590000 - 0x000007fefd5f7000 C:\Windows\system32\GDI32.dll
> 0x0000000077ae0000 - 0x0000000077bda000 C:\Windows\system32\USER32.dll
> 0x000007fefee20000 - 0x000007fefee2e000 C:\Windows\system32\LPK.dll
> 0x000007fefd900000 - 0x000007fefd9ca000 C:\Windows\system32\USP10.dll
> 0x000007feff0f0000 - 0x000007feff2f2000 C:\Windows\system32\ole32.dll
> 0x000007fefd9d0000 - 0x000007fefe756000 C:\Windows\system32\SHELL32.dll
> 0x0000000073a90000 - 0x0000000073a93000 C:\Windows\system32\sfc.dll
> 0x000007fef84b0000 - 0x000007fef84c0000 C:\Windows\system32\sfc_os.DLL
> 0x000007fefc3a0000 - 0x000007fefc3be000 C:\Windows\system32\USERENV.dll
> 0x000007fefd060000 - 0x000007fefd06f000 C:\Windows\system32\profapi.dll
> 0x000007fefaf20000 - 0x000007fefaf38000 C:\Windows\system32\dwmapi.dll
> 0x000007fef9a50000 - 0x000007fef9a68000 C:\Windows\system32\MPR.dll
> 0x000007fefeb90000 - 0x000007fefebbe000 C:\Windows\system32\IMM32.DLL
> 0x000007feff300000 - 0x000007feff409000 C:\Windows\system32\MSCTF.dll
> 0x000000006d890000 - 0x000000006df35000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\server\jvm.dll
> 0x000007fefa970000 - 0x000007fefa9ab000 C:\Windows\system32\WINMM.dll
> 0x000000006d800000 - 0x000000006d80e000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\verify.dll
> 0x000000006d450000 - 0x000000006d477000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\java.dll
> 0x000000006d3b0000 - 0x000000006d3ba000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\hpi.dll
> 0x0000000077db0000 - 0x0000000077db7000 C:\Windows\system32\PSAPI.DLL
> 0x000000006d4c0000 - 0x000000006d4f4000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\jdwp.dll
> 0x000000006d6d0000 - 0x000000006d6d8000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\npt.dll
> 0x000000006d850000 - 0x000000006d862000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\zip.dll
> 0x000000006d300000 - 0x000000006d30a000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\dt_shmem.dll
> 0x000007feed940000 - 0x000007feed9ab000
> C:\Users\...\dist\64\vtkCommonJava.dll
> 0x000007feea740000 - 0x000007feea9af000 C:\Users\...\dist\64\vtkCommon.dll
> 0x000007feed9d0000 - 0x000007feeda12000 C:\Users\...\dist\64\vtksys.dll
> 0x000007fefd600000 - 0x000007fefd64d000 C:\Windows\system32\WS2_32.dll
> 0x000007fefea10000 - 0x000007fefea18000 C:\Windows\system32\NSI.dll
> 0x0000000071280000 - 0x000000007131d000
> C:\Windows\WinSxS\amd64_microsoft.vc90.crt_1fc8b3b9a1e18e3b_9.0.30729.4926_none_08e1a05ba83fe554\MSVCR90.dll
> 0x000000006fd20000 - 0x000000006fdf3000
> C:\Windows\WinSxS\amd64_microsoft.vc90.crt_1fc8b3b9a1e18e3b_9.0.30729.4926_none_08e1a05ba83fe554\MSVCP90.dll
> 0x000007fef03d0000 - 0x000007fef03d9000 C:\Windows\system32\WSOCK32.dll
> 0x000007feed8a0000 - 0x000007feed93c000
> C:\Users\...\dist\64\vtkFilteringJava.dll
> 0x000007feea420000 - 0x000007feea732000
> C:\Users\...\dist\64\vtkFiltering.dll
> 0x000007fef9cd0000 - 0x000007fef9cdf000
> C:\Users\...\dist\64\vtkGenericFilteringJava.dll
> 0x000007feed450000 - 0x000007feed486000
> C:\Users\...\dist\64\vtkGenericFiltering.dll
> 0x000007fee9e20000 - 0x000007feea416000 C:\Users\...\dist\64\vtkGraphics.dll
> 0x000007feee2a0000 - 0x000007feee2d1000 C:\Users\...\dist\64\vtkverdict.dll
> 0x000007feed310000 - 0x000007feed3a2000
> C:\Users\...\dist\64\vtkGraphicsJava.dll
> 0x000007feed400000 - 0x000007feed44f000
> C:\Users\...\dist\64\vtkHybridJava.dll
> 0x000007fee9b70000 - 0x000007fee9e11000 C:\Users\...\dist\64\vtkHybrid.dll
> 0x000007fee88b0000 - 0x000007fee8d02000
> C:\Users\...\dist\64\vtkRendering.dll
> 0x000007fefd780000 - 0x000007fefd857000 C:\Windows\system32\OLEAUT32.dll
> 0x000007fee92d0000 - 0x000007fee959e000 C:\Users\...\dist\64\vtkImaging.dll
> 0x000007fee8400000 - 0x000007fee88a9000 C:\Users\...\dist\64\vtkIO.dll
> 0x000007feeeac0000 - 0x000007feeeae3000
> C:\Users\...\dist\64\vtkDICOMParser.dll
> 0x000007feed180000 - 0x000007feed230000 C:\Users\...\dist\64\vtkNetCDF.dll
> 0x000007fef8da0000 - 0x000007fef8dbd000
> C:\Users\...\dist\64\vtkNetCDF_cxx.dll
> 0x000007feed0e0000 - 0x000007feed173000 C:\Users\...\dist\64\vtkmetaio.dll
> 0x000007fef06c0000 - 0x000007fef06d5000 C:\Users\...\dist\64\vtkzlib.dll
> 0x000007feee840000 - 0x000007feee863000 C:\Users\...\dist\64\vtkpng.dll
> 0x000007feedce0000 - 0x000007feedd07000 C:\Users\...\dist\64\vtkjpeg.dll
> 0x000007feed2b0000 - 0x000007feed301000 C:\Users\...\dist\64\vtktiff.dll
> 0x000007feed600000 - 0x000007feed623000 C:\Users\...\dist\64\vtkexpat.dll
> 0x000007fef0580000 - 0x000007fef059f000 C:\Windows\system32\AVIFIL32.dll
> 0x000007fef8110000 - 0x000007fef8128000 C:\Windows\system32\MSACM32.dll
> 0x000007feed3d0000 - 0x000007feed3f9000 C:\Windows\system32\MSVFW32.dll
> 0x000007fefb9b0000 - 0x000007fefbba4000
> C:\Windows\WinSxS\amd64_microsoft.windows.common-controls_6595b64144ccf1df_6.0.7600.16661_none_fa62ad231704eab7\COMCTL32.dll
> 0x000007fefb980000 - 0x000007fefb98f000 C:\Users\...\dist\64\vtkftgl.dll
> 0x000007feec0d0000 - 0x000007feec1ed000 C:\Windows\system32\OPENGL32.dll
> 0x000007feed0b0000 - 0x000007feed0dd000 C:\Windows\system32\GLU32.dll
> 0x000007feec5f0000 - 0x000007feec6e1000 C:\Windows\system32\DDRAW.dll
> 0x000007fef9cc0000 - 0x000007fef9cc8000 C:\Windows\system32\DCIMAN32.dll
> 0x000007fefee30000 - 0x000007feff007000 C:\Windows\system32\SETUPAPI.dll
> 0x000007fefd380000 - 0x000007fefd3b6000 C:\Windows\system32\CFGMGR32.dll
> 0x000007fefd1b0000 - 0x000007fefd1ca000 C:\Windows\system32\DEVOBJ.dll
> 0x000007feec570000 - 0x000007feec5e4000 C:\Users\...\dist\64\vtkfreetype.dll
> 0x000007feeaa20000 - 0x000007feeac1f000 C:\Windows\system32\d3d9.dll
> 0x000007fefc1d0000 - 0x000007fefc1dc000 C:\Windows\system32\VERSION.dll
> 0x000007fef97b0000 - 0x000007fef97b7000 C:\Windows\system32\d3d8thk.dll
> 0x000007feec520000 - 0x000007feec565000 C:\Users\...\dist\64\vtkexoIIc.dll
> 0x000007feed9b0000 - 0x000007feed9c7000 C:\Windows\system32\AVICAP32.dll
> 0x000007feec040000 - 0x000007feec0c1000
> C:\Users\...\dist\64\vtkRenderingJava.dll
> 0x000000006d490000 - 0x000000006d497000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\jawt.dll
> 0x000000006d0a0000 - 0x000000006d262000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\awt.dll
> 0x000007fef8f20000 - 0x000007fef8f90000 C:\Windows\system32\WINSPOOL.DRV
> 0x000007feebff0000 - 0x000007feec03e000 C:\Users\...\dist\64\vtkIOJava.dll
> 0x000007feeb2a0000 - 0x000007feeb2e2000
> C:\Users\...\dist\64\vtkImagingJava.dll
> 0x000007feed080000 - 0x000007feed0a3000
> C:\Users\...\dist\64\vtkVolumeRenderingJava.dll
> 0x000007fee7f80000 - 0x000007fee83f8000
> C:\Users\...\dist\64\vtkVolumeRendering.dll
> 0x000007feeb240000 - 0x000007feeb292000
> C:\Users\...\dist\64\vtkWidgetsJava.dll
> 0x000007feeb0b0000 - 0x000007feeb23e000 C:\Users\...\dist\64\vtkWidgets.dll
> 0x000007feea9f0000 - 0x000007feeaa18000 C:\Users\...\dist\64\vtkgdcmJava.dll
> 0x000007fee97f0000 - 0x000007fee98af000 C:\Users\...\dist\64\vtkgdcm.dll
> 0x000007fee9060000 - 0x000007fee916e000 C:\Users\...\dist\64\gdcmMSFF.dll
> 0x000007feebd60000 - 0x000007feebd90000 C:\Users\...\dist\64\gdcmIOD.dll
> 0x000007fee9250000 - 0x000007fee92c5000 C:\Users\...\dist\64\gdcmDSED.dll
> 0x000007feed3b0000 - 0x000007feed3c4000 C:\Users\...\dist\64\gdcmCommon.dll
> 0x000007feec500000 - 0x000007feec516000 C:\Users\...\dist\64\gdcmzlib.dll
> 0x000007feea9c0000 - 0x000007feea9e3000 C:\Users\...\dist\64\gdcmexpat.dll
> 0x000007fee8f00000 - 0x000007fee905b000 C:\Users\...\dist\64\gdcmDICT.dll
> 0x000007fee9b40000 - 0x000007fee9b6b000 C:\Users\...\dist\64\gdcmjpeg8.dll
> 0x000007fee9980000 - 0x000007fee99ab000 C:\Users\...\dist\64\gdcmjpeg12.dll
> 0x000007fee9950000 - 0x000007fee997c000 C:\Users\...\dist\64\gdcmjpeg16.dll
> 0x000007fee97c0000 - 0x000007fee97e7000
> C:\Users\...\dist\64\gdcmopenjpeg.dll
> 0x000007fee8ec0000 - 0x000007fee8ef9000 C:\Users\...\dist\64\gdcmcharls.dll
> 0x000007fefbec0000 - 0x000007fefbf16000 C:\Windows\system32\uxtheme.dll
> 0x000007fefcf90000 - 0x000007fefcf9f000 C:\Windows\system32\CRYPTBASE.dll
> 0x000000006d340000 - 0x000000006d3ab000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\fontmanager.dll
> 0x000000006d6a0000 - 0x000000006d6b7000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\net.dll
> 0x000007fefc8b0000 - 0x000007fefc904000 C:\Windows\system32\mswsock.dll
> 0x000007fefc8a0000 - 0x000007fefc8a7000 C:\Windows\System32\wship6.dll
> 0x000000006d6c0000 - 0x000000006d6cb000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\nio.dll
> 0x000007fee8e50000 - 0x000007fee8ebf000 C:\Users\...\dist\64\gdcmjni.dll
> 0x000007fefc910000 - 0x000007fefc927000 C:\Windows\system32\CRYPTSP.dll
> 0x000007fefc610000 - 0x000007fefc657000 C:\Windows\system32\rsaenh.dll
> 0x000007fefbea0000 - 0x000007fefbeb5000 C:\Windows\system32\NLAapi.dll
> 0x000007fefc730000 - 0x000007fefc78b000 C:\Windows\system32\DNSAPI.dll
> 0x000007fef8e30000 - 0x000007fef8e3b000 C:\Windows\System32\winrnr.dll
> 0x000007fef8e10000 - 0x000007fef8e25000 C:\Windows\system32\napinsp.dll
> 0x000007fef8df0000 - 0x000007fef8e09000 C:\Windows\system32\pnrpnsp.dll
> 0x000007fef8de0000 - 0x000007fef8df0000 C:\Windows\system32\wshbth.dll
> 0x000007fefc2a0000 - 0x000007fefc2a7000 C:\Windows\System32\wshtcpip.dll
> 0x000007fefa640000 - 0x000007fefa667000 C:\Windows\system32\IPHLPAPI.DLL
> 0x000007fefa630000 - 0x000007fefa63b000 C:\Windows\system32\WINNSI.DLL
> 0x000007fef8dd0000 - 0x000007fef8dd8000 C:\Windows\system32\rasadhlp.dll
> VM Arguments:
> jvm_args: -Xdebug -Xrunjdwp:transport=dt_shmem,address=javadebug
> -Dfile.encoding=UTF-8 -Dsun.java2d.ddoffscreen=false
> -Dsun.java2d.gdiblit=false
> java_command: viewer.Application medicalvisionsystems.org 22 yes no
> C:\Users\jmorra\Documents\Mark and Jon
> Company\Whole_body\Prostate\001\dicomFiles jhm jhm
> Launcher Type: SUN_STANDARD
> Environment Variables:
> JAVA_HOME=C:\Program Files\Java\jdk1.6.0_18
> PATH=C:\Program Files (x86)\MiKTeX
> 2.8\miktex\bin;C:\Ruby19\bin;C:\Windows\system32;C:\Windows;C:\Windows\System32\Wbem;C:\Windows\System32\WindowsPowerShell\v1.0\;C:\strawberry\c\bin;C:\strawberry\perl\bin;c:\Program
> Files (x86)\Microsoft SQL Server\90\Tools\binn\;C:\Program Files\MySQL\MySQL
> Server
> 5.1\bin;C:\Users\jmorra\Downloads\dcm4che\dcm4che-2.0.21\bin;C:\Users\...\dist\64;C:\Program
> Files (x86)\SSH Communications Security\SSH Secure Shell
> USERNAME=jmorra
> OS=Windows_NT
> PROCESSOR_IDENTIFIER=Intel64 Family 6 Model 23 Stepping 10, GenuineIntel
>
>
> --------------- S Y S T E M ---------------
> OS: Windows 7 Build 7600
> CPU:total 2 (2 cores per cpu, 1 threads per core) family 6 model 23 stepping
> 10, cmov, cx8, fxsr, mmx, sse, sse2, sse3, ssse3, sse4.1
> Memory: 4k page, physical 4158344k(1403236k free), swap 8314792k(4018404k
> free)
> vm_info: Java HotSpot(TM) 64-Bit Server VM (16.0-b13) for windows-amd64 JRE
> (1.6.0_18-b07), built on Dec 17 2009 13:24:11 by "java_re" with MS VC++ 8.0
> (VS2005)
> time: Wed Feb 16 15:09:18 2011
> elapsed time: 67 seconds
> And I get the following error for vtkMarchingCubes
> #
> # A fatal error has been detected by the Java Runtime Environment:
> #
> # EXCEPTION_ACCESS_VIOLATION (0xc0000005) at pc=0x000007feea7fb776,
> pid=1504, tid=4160
> #
> # JRE version: 6.0_18-b07
> # Java VM: Java HotSpot(TM) 64-Bit Server VM (16.0-b13 mixed mode
> windows-amd64 )
> # Problematic frame:
> # C [vtkCommon.dll+0xbb776]
> #
> # If you would like to submit a bug report, please visit:
> # http://java.sun.com/webapps/bugreport/crash.jsp
> # The crash happened outside the Java Virtual Machine in native code.
> # See problematic frame for where to report the bug.
> #
> --------------- T H R E A D ---------------
> Current thread (0x000000004ce95800): JavaThread
> "SwingWorker-pool-4-thread-1" daemon [_thread_in_native, id=4160,
> stack(0x000000007e680000,0x000000007e780000)]
> siginfo: ExceptionCode=0xc0000005, reading address 0xffffffffffffffff
> Registers:
> EAX=0x000007feea8b0041, EBX=0x000000009fca8690, ECX=0x000000009fca8690,
> EDX=0x0000000000000000
> ESP=0x000000007e77ed98, EBP=0x000000004c8fffb0, ESI=0x0000000000000000,
> EDI=0x000000004c90b610
> EIP=0x000007feea7fb776, EFLAGS=0x0000000000010246
> Top of Stack: (sp=0x000000007e77ed98)
> 0x000000007e77ed98: 000007feea7a8656 000000009fca8690
> 0x000000007e77eda8: 000000004c8fffb0 0000000000000000
> 0x000000007e77edb8: 000007feea5bd859 0000000055837aa0
> 0x000000007e77edc8: 000000004c91e5a0 000000004ca08b50
> 0x000000007e77edd8: 0000000000000000 fffffffffffffffe
> 0x000000007e77ede8: 000000004c8ffcb0 0000000000000000
> 0x000000007e77edf8: 000007feea5d6cb7 000000004c8fffb0
> 0x000000007e77ee08: 000000004c8ffcb0 000000009fcb1a40
> 0x000000007e77ee18: 000000004c97a770 fffffffffffffffe
> 0x000000007e77ee28: 000007feea7aa349 0000000000000000
> 0x000000007e77ee38: 000000004c952360 0000000000000000
> 0x000000007e77ee48: 0000000000000000 0000000000000001
> 0x000000007e77ee58: 000000009fcb1d40 000000009fcb1a40
> 0x000000007e77ee68: 000000004ca08b50 000000009fcb1a40
> 0x000000007e77ee78: 000000004ca08b50 0000000000000000
> 0x000000007e77ee88: 000007feea4a3a2c 000000004ca08b50
> Instructions: (pc=0x000007feea7fb776)
> 0x000007feea7fb766: 48 ff 60 58 cc cc cc cc cc cc 48 8b 01 45 33 c0
> 0x000007feea7fb776: 48 ff 60 60 cc cc cc cc cc cc 40 53 48 83 ec 20
>
> Stack: [0x000000007e680000,0x000000007e780000], sp=0x000000007e77ed98,
> free space=3fb0000000000000000k
> Native frames: (J=compiled Java code, j=interpreted, Vv=VM code, C=native
> code)
> C [vtkCommon.dll+0xbb776]
> Java frames: (J=compiled Java code, j=interpreted, Vv=VM code)
> j vtk.vtkAlgorithm.Update_52()V+0
> j vtk.vtkAlgorithm.Update()V+1
> j
> data.OrthoDataManager.getOrganMesh(Ljava/lang/String;)Lvtk/vtkPolyData;+44
> j viewer.ThreeDPanel$OrganViewer.doInBackground()Lvtk/vtkPolyData;+25
> j viewer.ThreeDPanel$OrganViewer.doInBackground()Ljava/lang/Object;+1
> j javax.swing.SwingWorker$1.call()Ljava/lang/Object;+14
> j java.util.concurrent.FutureTask$Sync.innerRun()V+30
> j java.util.concurrent.FutureTask.run()V+4
> j javax.swing.SwingWorker.run()V+4
> j
> java.util.concurrent.ThreadPoolExecutor$Worker.runTask(Ljava/lang/Runnable;)V+59
> j java.util.concurrent.ThreadPoolExecutor$Worker.run()V+28
> j java.lang.Thread.run()V+11
> v ~StubRoutines::call_stub
> --------------- P R O C E S S ---------------
> Java Threads: ( => current thread )
> 0x000000004ce97000 JavaThread "Thread-26" [_thread_blocked, id=5240,
> stack(0x00000000513f0000,0x00000000514f0000)]
> =>0x000000004ce95800 JavaThread "SwingWorker-pool-4-thread-1" daemon
> [_thread_in_native, id=4160, stack(0x000000007e680000,0x000000007e780000)]
> 0x000000004ce96800 JavaThread "pool-1-thread-1" [_thread_blocked, id=3848,
> stack(0x0000000050b70000,0x0000000050c70000)]
> 0x000000004ce95000 JavaThread "DestroyJavaVM" [_thread_blocked, id=3388,
> stack(0x0000000002610000,0x0000000002710000)]
> 0x000000004ce94800 JavaThread "Thread-9" [_thread_blocked, id=4312,
> stack(0x0000000050870000,0x0000000050970000)]
> 0x000000004ce93000 JavaThread "Timer-2" [_thread_blocked, id=2816,
> stack(0x000000004da20000,0x000000004db20000)]
> 0x000000004ce92000 JavaThread "ssh-connection 1" daemon [_thread_blocked,
> id=496, stack(0x000000004d5a0000,0x000000004d6a0000)]
> 0x000000004cdb9800 JavaThread "Transport protocol 1" daemon
> [_thread_in_native, id=6128, stack(0x000000004d4a0000,0x000000004d5a0000)]
> 0x000000004e06d000 JavaThread "TimerQueue" daemon [_thread_blocked,
> id=4632, stack(0x000000004f310000,0x000000004f410000)]
> 0x000000004cd1e800 JavaThread "Timer-1" [_thread_blocked, id=2772,
> stack(0x000000004e800000,0x000000004e900000)]
> 0x000000004b097000 JavaThread "Timer-0" [_thread_blocked, id=5984,
> stack(0x000000004df00000,0x000000004e000000)]
> 0x000000004cb7f800 JavaThread "AWT-EventQueue-0" [_thread_in_native,
> id=3680, stack(0x000000004de00000,0x000000004df00000)]
> 0x000000004b0c9000 JavaThread "AWT-Windows" daemon [_thread_in_native,
> id=5056, stack(0x000000004d3a0000,0x000000004d4a0000)]
> 0x000000004b043800 JavaThread "AWT-Shutdown" [_thread_blocked, id=2944,
> stack(0x000000004d2a0000,0x000000004d3a0000)]
> 0x000000004b07d800 JavaThread "Java2D Disposer" daemon [_thread_blocked,
> id=5316, stack(0x000000004d1a0000,0x000000004d2a0000)]
> 0x000000004af39800 JavaThread "Low Memory Detector" daemon
> [_thread_blocked, id=2764, stack(0x000000004b7d0000,0x000000004b8d0000)]
> 0x000000004af38800 JavaThread "CompilerThread1" daemon [_thread_blocked,
> id=3672, stack(0x000000004b6d0000,0x000000004b7d0000)]
> 0x000000004af32800 JavaThread "CompilerThread0" daemon [_thread_blocked,
> id=2296, stack(0x000000004b5d0000,0x000000004b6d0000)]
> 0x000000004af1d800 JavaThread "JDWP Command Reader" daemon
> [_thread_in_native, id=6116, stack(0x000000004b4d0000,0x000000004b5d0000)]
> 0x000000004af1a000 JavaThread "JDWP Event Helper Thread" daemon
> [_thread_blocked, id=528, stack(0x000000004b3d0000,0x000000004b4d0000)]
> 0x000000004af12000 JavaThread "JDWP Transport Listener: dt_shmem" daemon
> [_thread_blocked, id=320, stack(0x000000004b2d0000,0x000000004b3d0000)]
> 0x0000000000711000 JavaThread "Attach Listener" daemon [_thread_blocked,
> id=4880, stack(0x000000004b1d0000,0x000000004b2d0000)]
> 0x0000000000710000 JavaThread "Signal Dispatcher" daemon [_thread_blocked,
> id=5972, stack(0x000000004b0d0000,0x000000004b1d0000)]
> 0x00000000006f8000 JavaThread "Finalizer" daemon [_thread_blocked,
> id=3820, stack(0x000000004add0000,0x000000004aed0000)]
> 0x00000000006f4000 JavaThread "Reference Handler" daemon [_thread_blocked,
> id=4300, stack(0x000000004acd0000,0x000000004add0000)]
> Other Threads:
> 0x00000000006ef800 VMThread [stack: 0x000000004abd0000,0x000000004acd0000]
> [id=3888]
> 0x000000004af3f800 WatcherThread [stack:
> 0x000000004b8d0000,0x000000004b9d0000] [id=5924]
> VM state:not at safepoint (normal execution)
> VM Mutex/Monitor currently owned by a thread: None
> Heap
> PSYoungGen total 257088K, used 233554K [0x0000000035070000,
> 0x00000000453e0000, 0x000000004a310000)
> eden space 249280K, 93% used
> [0x0000000035070000,0x0000000043484be0,0x00000000443e0000)
> from space 7808K, 0% used
> [0x0000000044c40000,0x0000000044c40000,0x00000000453e0000)
> to space 8192K, 0% used
> [0x00000000443e0000,0x00000000443e0000,0x0000000044be0000)
> PSOldGen total 43392K, used 10907K [0x000000000ab10000,
> 0x000000000d570000, 0x0000000035070000)
> object space 43392K, 25% used
> [0x000000000ab10000,0x000000000b5b6dc0,0x000000000d570000)
> PSPermGen total 45824K, used 23770K [0x0000000005710000,
> 0x00000000083d0000, 0x000000000ab10000)
> object space 45824K, 51% used
> [0x0000000005710000,0x0000000006e46a98,0x00000000083d0000)
> Dynamic libraries:
> 0x0000000000400000 - 0x000000000042e000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\java.exe
> 0x0000000077be0000 - 0x0000000077d8c000 C:\Windows\SYSTEM32\ntdll.dll
> 0x00000000779c0000 - 0x0000000077adf000 C:\Windows\system32\kernel32.dll
> 0x000007fefd3c0000 - 0x000007fefd42b000 C:\Windows\system32\KERNELBASE.dll
> 0x000007fefd430000 - 0x000007fefd50b000 C:\Windows\system32\ADVAPI32.dll
> 0x000007fefd860000 - 0x000007fefd8ff000 C:\Windows\system32\msvcrt.dll
> 0x000007feff0b0000 - 0x000007feff0cf000 C:\Windows\SYSTEM32\sechost.dll
> 0x000007fefe8e0000 - 0x000007fefea0e000 C:\Windows\system32\RPCRT4.dll
> 0x000007fefcf30000 - 0x000007fefcf87000 C:\Windows\system32\apphelp.dll
> 0x000007feeea00000 - 0x000007feeea51000
> C:\Windows\AppPatch\AppPatch64\AcGenral.DLL
> 0x000007fefcf00000 - 0x000007fefcf25000 C:\Windows\system32\SspiCli.dll
> 0x000007fefd510000 - 0x000007fefd581000 C:\Windows\system32\SHLWAPI.dll
> 0x000007fefd590000 - 0x000007fefd5f7000 C:\Windows\system32\GDI32.dll
> 0x0000000077ae0000 - 0x0000000077bda000 C:\Windows\system32\USER32.dll
> 0x000007fefee20000 - 0x000007fefee2e000 C:\Windows\system32\LPK.dll
> 0x000007fefd900000 - 0x000007fefd9ca000 C:\Windows\system32\USP10.dll
> 0x000007feff0f0000 - 0x000007feff2f2000 C:\Windows\system32\ole32.dll
> 0x000007fefd9d0000 - 0x000007fefe756000 C:\Windows\system32\SHELL32.dll
> 0x0000000073a90000 - 0x0000000073a93000 C:\Windows\system32\sfc.dll
> 0x000007fef84b0000 - 0x000007fef84c0000 C:\Windows\system32\sfc_os.DLL
> 0x000007fefc3a0000 - 0x000007fefc3be000 C:\Windows\system32\USERENV.dll
> 0x000007fefd060000 - 0x000007fefd06f000 C:\Windows\system32\profapi.dll
> 0x000007fefaf20000 - 0x000007fefaf38000 C:\Windows\system32\dwmapi.dll
> 0x000007fef9a50000 - 0x000007fef9a68000 C:\Windows\system32\MPR.dll
> 0x000007fefeb90000 - 0x000007fefebbe000 C:\Windows\system32\IMM32.DLL
> 0x000007feff300000 - 0x000007feff409000 C:\Windows\system32\MSCTF.dll
> 0x000000006d890000 - 0x000000006df35000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\server\jvm.dll
> 0x000007fefa970000 - 0x000007fefa9ab000 C:\Windows\system32\WINMM.dll
> 0x000000006d800000 - 0x000000006d80e000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\verify.dll
> 0x000000006d450000 - 0x000000006d477000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\java.dll
> 0x000000006d3b0000 - 0x000000006d3ba000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\hpi.dll
> 0x0000000077db0000 - 0x0000000077db7000 C:\Windows\system32\PSAPI.DLL
> 0x000000006d4c0000 - 0x000000006d4f4000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\jdwp.dll
> 0x000000006d6d0000 - 0x000000006d6d8000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\npt.dll
> 0x000000006d850000 - 0x000000006d862000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\zip.dll
> 0x000000006d300000 - 0x000000006d30a000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\dt_shmem.dll
> 0x000007fef06f0000 - 0x000007fef075b000
> C:\Users\...\dist\64\vtkCommonJava.dll
> 0x000007feea740000 - 0x000007feea9af000 C:\Users\...\dist\64\vtkCommon.dll
> 0x000007feee190000 - 0x000007feee1d2000 C:\Users\...\dist\64\vtksys.dll
> 0x000007fefd600000 - 0x000007fefd64d000 C:\Windows\system32\WS2_32.dll
> 0x000007fefea10000 - 0x000007fefea18000 C:\Windows\system32\NSI.dll
> 0x0000000071280000 - 0x000000007131d000
> C:\Windows\WinSxS\amd64_microsoft.vc90.crt_1fc8b3b9a1e18e3b_9.0.30729.4926_none_08e1a05ba83fe554\MSVCR90.dll
> 0x000000006fd20000 - 0x000000006fdf3000
> C:\Windows\WinSxS\amd64_microsoft.vc90.crt_1fc8b3b9a1e18e3b_9.0.30729.4926_none_08e1a05ba83fe554\MSVCP90.dll
> 0x000007fef03d0000 - 0x000007fef03d9000 C:\Windows\system32\WSOCK32.dll
> 0x000007feed980000 - 0x000007feeda1c000
> C:\Users\...\dist\64\vtkFilteringJava.dll
> 0x000007feea420000 - 0x000007feea732000
> C:\Users\...\dist\64\vtkFiltering.dll
> 0x000007fefb9a0000 - 0x000007fefb9af000
> C:\Users\...\dist\64\vtkGenericFilteringJava.dll
> 0x000007fef06b0000 - 0x000007fef06e6000
> C:\Users\...\dist\64\vtkGenericFiltering.dll
> 0x000007fee9e20000 - 0x000007feea416000 C:\Users\...\dist\64\vtkGraphics.dll
> 0x000007fef97b0000 - 0x000007fef97e1000 C:\Users\...\dist\64\vtkverdict.dll
> 0x000007feed8e0000 - 0x000007feed972000
> C:\Users\...\dist\64\vtkGraphicsJava.dll
> 0x000007feed890000 - 0x000007feed8df000
> C:\Users\...\dist\64\vtkHybridJava.dll
> 0x000007fee9b70000 - 0x000007fee9e11000 C:\Users\...\dist\64\vtkHybrid.dll
> 0x000007fee88b0000 - 0x000007fee8d02000
> C:\Users\...\dist\64\vtkRendering.dll
> 0x000007fefd780000 - 0x000007fefd857000 C:\Windows\system32\OLEAUT32.dll
> 0x000007fee92d0000 - 0x000007fee959e000 C:\Users\...\dist\64\vtkImaging.dll
> 0x000007fee8400000 - 0x000007fee88a9000 C:\Users\...\dist\64\vtkIO.dll
> 0x000007feeeac0000 - 0x000007feeeae3000
> C:\Users\...\dist\64\vtkDICOMParser.dll
> 0x000007feed790000 - 0x000007feed840000 C:\Users\...\dist\64\vtkNetCDF.dll
> 0x000007fefab80000 - 0x000007fefab9d000
> C:\Users\...\dist\64\vtkNetCDF_cxx.dll
> 0x000007feed6f0000 - 0x000007feed783000 C:\Users\...\dist\64\vtkmetaio.dll
> 0x000007fef9cc0000 - 0x000007fef9cd5000 C:\Users\...\dist\64\vtkzlib.dll
> 0x000007feee840000 - 0x000007feee863000 C:\Users\...\dist\64\vtkpng.dll
> 0x000007feedce0000 - 0x000007feedd07000 C:\Users\...\dist\64\vtkjpeg.dll
> 0x000007feed690000 - 0x000007feed6e1000 C:\Users\...\dist\64\vtktiff.dll
> 0x000007feee2b0000 - 0x000007feee2d3000 C:\Users\...\dist\64\vtkexpat.dll
> 0x000007fef8da0000 - 0x000007fef8dbf000 C:\Windows\system32\AVIFIL32.dll
> 0x000007fef8110000 - 0x000007fef8128000 C:\Windows\system32\MSACM32.dll
> 0x000007feed660000 - 0x000007feed689000 C:\Windows\system32\MSVFW32.dll
> 0x000007fefb9b0000 - 0x000007fefbba4000
> C:\Windows\WinSxS\amd64_microsoft.windows.common-controls_6595b64144ccf1df_6.0.7600.16661_none_fa62ad231704eab7\COMCTL32.dll
> 0x000007fefb980000 - 0x000007fefb98f000 C:\Users\...\dist\64\vtkftgl.dll
> 0x000007feed370000 - 0x000007feed48d000 C:\Windows\system32\OPENGL32.dll
> 0x000007feed630000 - 0x000007feed65d000 C:\Windows\system32\GLU32.dll
> 0x000007feed130000 - 0x000007feed221000 C:\Windows\system32\DDRAW.dll
> 0x000007fef0840000 - 0x000007fef0848000 C:\Windows\system32\DCIMAN32.dll
> 0x000007fefee30000 - 0x000007feff007000 C:\Windows\system32\SETUPAPI.dll
> 0x000007fefd380000 - 0x000007fefd3b6000 C:\Windows\system32\CFGMGR32.dll
> 0x000007fefd1b0000 - 0x000007fefd1ca000 C:\Windows\system32\DEVOBJ.dll
> 0x000007feed2f0000 - 0x000007feed364000 C:\Users\...\dist\64\vtkfreetype.dll
> 0x000007feebdb0000 - 0x000007feebfaf000 C:\Windows\system32\d3d9.dll
> 0x000007fefc1d0000 - 0x000007fefc1dc000 C:\Windows\system32\VERSION.dll
> 0x000007fef05c0000 - 0x000007fef05c7000 C:\Windows\system32\d3d8thk.dll
> 0x000007feed0e0000 - 0x000007feed125000 C:\Users\...\dist\64\vtkexoIIc.dll
> 0x000007fef0580000 - 0x000007fef0597000 C:\Windows\system32\AVICAP32.dll
> 0x000007feec660000 - 0x000007feec6e1000
> C:\Users\...\dist\64\vtkRenderingJava.dll
> 0x000000006d490000 - 0x000000006d497000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\jawt.dll
> 0x000000006d0a0000 - 0x000000006d262000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\awt.dll
> 0x000007fef8f20000 - 0x000007fef8f90000 C:\Windows\system32\WINSPOOL.DRV
> 0x000007feed090000 - 0x000007feed0de000 C:\Users\...\dist\64\vtkIOJava.dll
> 0x000007feec610000 - 0x000007feec652000
> C:\Users\...\dist\64\vtkImagingJava.dll
> 0x000007feed600000 - 0x000007feed623000
> C:\Users\...\dist\64\vtkVolumeRenderingJava.dll
> 0x000007fee7f80000 - 0x000007fee83f8000
> C:\Users\...\dist\64\vtkVolumeRendering.dll
> 0x000007feec5b0000 - 0x000007feec602000
> C:\Users\...\dist\64\vtkWidgetsJava.dll
> 0x000007feec060000 - 0x000007feec1ee000 C:\Users\...\dist\64\vtkWidgets.dll
> 0x000007feed2c0000 - 0x000007feed2e8000 C:\Users\...\dist\64\vtkgdcmJava.dll
> 0x000007feeb170000 - 0x000007feeb22f000 C:\Users\...\dist\64\vtkgdcm.dll
> 0x000007feeab10000 - 0x000007feeac1e000 C:\Users\...\dist\64\gdcmMSFF.dll
> 0x000007feec580000 - 0x000007feec5b0000 C:\Users\...\dist\64\gdcmIOD.dll
> 0x000007feec500000 - 0x000007feec575000 C:\Users\...\dist\64\gdcmDSED.dll
> 0x000007feed070000 - 0x000007feed084000 C:\Users\...\dist\64\gdcmCommon.dll
> 0x000007feec040000 - 0x000007feec056000 C:\Users\...\dist\64\gdcmzlib.dll
> 0x000007feec010000 - 0x000007feec033000 C:\Users\...\dist\64\gdcmexpat.dll
> 0x000007feea9b0000 - 0x000007feeab0b000 C:\Users\...\dist\64\gdcmDICT.dll
> 0x000007feebd60000 - 0x000007feebd8b000 C:\Users\...\dist\64\gdcmjpeg8.dll
> 0x000007feeb2c0000 - 0x000007feeb2eb000 C:\Users\...\dist\64\gdcmjpeg12.dll
> 0x000007feeb290000 - 0x000007feeb2bc000 C:\Users\...\dist\64\gdcmjpeg16.dll
> 0x000007feeb260000 - 0x000007feeb287000
> C:\Users\...\dist\64\gdcmopenjpeg.dll
> 0x000007feeb130000 - 0x000007feeb169000 C:\Users\...\dist\64\gdcmcharls.dll
> 0x000007fefbec0000 - 0x000007fefbf16000 C:\Windows\system32\uxtheme.dll
> 0x000007fefcf90000 - 0x000007fefcf9f000 C:\Windows\system32\CRYPTBASE.dll
> 0x000000006d340000 - 0x000000006d3ab000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\fontmanager.dll
> 0x000000006d6a0000 - 0x000000006d6b7000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\net.dll
> 0x000007fefc8b0000 - 0x000007fefc904000 C:\Windows\system32\mswsock.dll
> 0x000007fefc8a0000 - 0x000007fefc8a7000 C:\Windows\System32\wship6.dll
> 0x000000006d6c0000 - 0x000000006d6cb000 C:\Program
> Files\Java\jdk1.6.0_18\jre\bin\nio.dll
> 0x000007feeb0c0000 - 0x000007feeb12f000 C:\Users\...\dist\64\gdcmjni.dll
> 0x000007fefc910000 - 0x000007fefc927000 C:\Windows\system32\CRYPTSP.dll
> 0x000007fefc610000 - 0x000007fefc657000 C:\Windows\system32\rsaenh.dll
> 0x000007fefbea0000 - 0x000007fefbeb5000 C:\Windows\system32\NLAapi.dll
> 0x000007fefc730000 - 0x000007fefc78b000 C:\Windows\system32\DNSAPI.dll
> 0x000007fef8e30000 - 0x000007fef8e3b000 C:\Windows\System32\winrnr.dll
> 0x000007fef8e10000 - 0x000007fef8e25000 C:\Windows\system32\napinsp.dll
> 0x000007fef8df0000 - 0x000007fef8e09000 C:\Windows\system32\pnrpnsp.dll
> 0x000007fef8de0000 - 0x000007fef8df0000 C:\Windows\system32\wshbth.dll
> 0x000007fefc2a0000 - 0x000007fefc2a7000 C:\Windows\System32\wshtcpip.dll
> 0x000007fefa640000 - 0x000007fefa667000 C:\Windows\system32\IPHLPAPI.DLL
> 0x000007fefa630000 - 0x000007fefa63b000 C:\Windows\system32\WINNSI.DLL
> 0x000007fef8dd0000 - 0x000007fef8dd8000 C:\Windows\system32\rasadhlp.dll
> VM Arguments:
> jvm_args: -Xdebug -Xrunjdwp:transport=dt_shmem,address=javadebug
> -Dfile.encoding=UTF-8 -Dsun.java2d.ddoffscreen=false
> -Dsun.java2d.gdiblit=false
> java_command: viewer.Application medicalvisionsystems.org 22 yes no
> C:\Users\jmorra\Documents\Mark and Jon
> Company\Whole_body\Prostate\001\dicomFiless jhm jhm
> Launcher Type: SUN_STANDARD
> Environment Variables:
> JAVA_HOME=C:\Program Files\Java\jdk1.6.0_18
> PATH=C:\Program Files (x86)\MiKTeX
> 2.8\miktex\bin;C:\Ruby19\bin;C:\Windows\system32;C:\Windows;C:\Windows\System32\Wbem;C:\Windows\System32\WindowsPowerShell\v1.0\;C:\strawberry\c\bin;C:\strawberry\perl\bin;c:\Program
> Files (x86)\Microsoft SQL Server\90\Tools\binn\;C:\Program Files\MySQL\MySQL
> Server
> 5.1\bin;C:\Users\jmorra\Downloads\dcm4che\dcm4che-2.0.21\bin;C:\Users\...\dist\64;C:\Program
> Files (x86)\SSH Communications Security\SSH Secure Shell
> USERNAME=jmorra
> OS=Windows_NT
> PROCESSOR_IDENTIFIER=Intel64 Family 6 Model 23 Stepping 10, GenuineIntel
>
>
> --------------- S Y S T E M ---------------
> OS: Windows 7 Build 7600
> CPU:total 2 (2 cores per cpu, 1 threads per core) family 6 model 23 stepping
> 10, cmov, cx8, fxsr, mmx, sse, sse2, sse3, ssse3, sse4.1
> Memory: 4k page, physical 4158344k(1416708k free), swap 8314792k(4041796k
> free)
> vm_info: Java HotSpot(TM) 64-Bit Server VM (16.0-b13) for windows-amd64 JRE
> (1.6.0_18-b07), built on Dec 17 2009 13:24:11 by "java_re" with MS VC++ 8.0
> (VS2005)
> time: Wed Feb 16 14:47:26 2011
> elapsed time: 54 seconds
> Any help fixing these issues would be greatly appreciated.
> _______________________________________________
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