[vtkusers] vtkpcaanalysisfilter giving points of nans

gregthom gregthom99 at yahoo.com
Mon Dec 7 10:01:13 EST 2009


Greetings 

I am working on pca analysis filter and have built everything to
specifications. 

However when I write out a result from the pca analysisfilter I get all
polydata with all nans for the points

# vtk DataFile Version 3.0
vtk output
ASCII
DATASET POLYDATA
POINTS 544 float
nan nan nan nan nan nan nan nan nan 
nan nan nan nan nan nan nan nan nan 
nan nan nan nan nan nan nan nan nan 
nan nan nan nan nan nan nan nan nan 
nan nan nan nan nan nan nan nan nan 




My Code looks like: 


meshSnew = pcaanalysisfilter(meshS1,meshS2,meshS3,meshS4,[-3 0.0 0.0 0]);

where

for (unsigned int j = 0;j<nrhs-1;j++)
   {
     MeshType::Pointer mymesh0  =  meshSstructToItkMesh(prhs[j]);
     vtkPolyData* polydatainput = ITKMeshToVtkPolyData(mymesh0);
     PCA->SetInput(j,polydatainput); 
   }

   // update pca analysis filter
   PCA->Update(); 
   
   // debug     
   vtkIndent indent ; 
   ofstream ofile("pcaanalysislog.txt");
   PCA -> PrintSelf(ofile,indent);


   vtkFloatArray *params = vtkFloatArray::New();
   params -> SetNumberOfComponents(1); // 1 per tuple
   params -> SetNumberOfTuples(numparams); // 1 instance 


   // float val[1]; val[0] = variance_fact; params -> SetTuple(0, val);
   for (unsigned int i = 0; i < numparams; i++) 
   {     
       params -> SetTuple1(i, paramsptr[i]);
       double * res = params->GetTuple(i);
       mexPrintf(">> params = %f\n", res[0] );     
   }



   vtkPolyData *meshtmp       = vtkPolyData::New();   
   MeshType::Pointer mymesh0  =  meshSstructToItkMesh(prhs[0]);
   meshtmp                    = ITKMeshToVtkPolyData(mymesh0);

   PCA -> GetParameterisedShape(params, meshtmp);


   vtkPolyDataWriter* pwriter = vtkPolyDataWriter::New();
   pwriter->SetInput(meshtmp);
   pwriter->SetFileName( "shapemode.vtk" );
   pwriter->Update();


   
   
   meshtmp->Delete();
   pwriter->Delete();
   PCA->Delete();
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