[vtkusers] undefined reference
Burlen Loring
burlen.loring at kitware.com
Thu Oct 16 17:48:06 EDT 2008
I take that back, you'll have to see if the symbols are actually defined
in /usr/lib64/libvtkCommon.so.5.0, if not try to find where they are
defined and include that library in your link line.
Burlen Loring wrote:
> The symbols probably should have been linked in to begin with and in
> the current cvs build they are. The missing symbols are found (at
> least in my build which is from cvs) in the vtkCommon library. You
> should be able work around your missing symbols by include a
> "-lvtkCommon" in the link line for your app.
>
> Yenan Qu wrote:
>> Here is the Output:
>> libvtkCommon.so.5.0 => /usr/lib64/libvtkCommon.so.5.0
>> (0x00002aaaaad7b000)
>> libvtksys.so.5.0 => /usr/lib64/libvtksys.so.5.0
>> (0x00002aaaab019000)
>> libpthread.so.0 => /lib64/libpthread.so.0 (0x00002aaaab13c000)
>> libdl.so.2 => /lib64/libdl.so.2 (0x00002aaaab255000)
>> libstdc++.so.6 => /usr/lib64/libstdc++.so.6 (0x00002aaaab359000)
>> libm.so.6 => /lib64/libm.so.6 (0x00002aaaab558000)
>> libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x00002aaaab6da000)
>> libc.so.6 => /lib64/libc.so.6 (0x00002aaaab7e7000)
>> /lib64/ld-linux-x86-64.so.2 (0x0000555555554000)
>> undefined symbol: PyExc_RuntimeError (./libvtkCommonPythonD.so)
>> undefined symbol: _Py_NoneStruct (./libvtkCommonPythonD.so)
>> undefined symbol: PyString_Type (./libvtkCommonPythonD.so)
>> undefined symbol: PyExc_KeyboardInterrupt
>> (./libvtkCommonPythonD.so)
>> undefined symbol: PyLong_Type (./libvtkCommonPythonD.so)
>> undefined symbol: PyExc_ValueError (./libvtkCommonPythonD.so)
>> undefined symbol: PyExc_TypeError (./libvtkCommonPythonD.so)
>> undefined symbol: PyTuple_Type (./libvtkCommonPythonD.so)
>> undefined symbol: PyExc_AttributeError (./libvtkCommonPythonD.so)
>> undefined symbol: PyCFunction_Type (./libvtkCommonPythonD.so)
>> undefined symbol: PyDict_Type (./libvtkCommonPythonD.so)
>> undefined symbol: PyType_Type (./libvtkCommonPythonD.so)
>> undefined symbol: PyInt_FromLong (./libvtkCommonPythonD.so)
>> undefined symbol: PyEval_GetGlobals (./libvtkCommonPythonD.so)
>> undefined symbol: PyDict_DelItemString (./libvtkCommonPythonD.so)
>> undefined symbol: PyObject_Free (./libvtkCommonPythonD.so)
>> undefined symbol: PySequence_GetItem (./libvtkCommonPythonD.so)
>> undefined symbol: Py_AtExit (./libvtkCommonPythonD.so)
>> undefined symbol: PyErr_ExceptionMatches
>> (./libvtkCommonPythonD.so)
>> undefined symbol: _ZN12vtkDirectory15FileIsDirectoryEPKc
>> (./libvtkCommonPythonD.so)
>> undefined symbol: PyDict_SetItemString (./libvtkCommonPythonD.so)
>> undefined symbol: _ZN9vtkObject18RemoveAllObserversEv
>> (./libvtkCommonPythonD.so)
>> undefined symbol: Py_BuildValue (./libvtkCommonPythonD.so)
>> undefined symbol: PyObject_ClearWeakRefs
>> (./libvtkCommonPythonD.so)
>> undefined symbol: PyErr_SetString (./libvtkCommonPythonD.so)
>> undefined symbol: PyDict_SetItem (./libvtkCommonPythonD.so)
>> undefined symbol: PyLong_FromLong (./libvtkCommonPythonD.so)
>> undefined symbol: PySequence_SetItem (./libvtkCommonPythonD.so)
>> undefined symbol: Py_InitModule4 (./libvtkCommonPythonD.so)
>> undefined symbol: _PyObject_New (./libvtkCommonPythonD.so)
>> undefined symbol: PyArg_ParseTupleAndKeywords
>> (./libvtkCommonPythonD.so)
>> undefined symbol: PyGILState_Ensure (./libvtkCommonPythonD.so)
>> undefined symbol: _PyString_Resize (./libvtkCommonPythonD.so)
>> undefined symbol: PyObject_GetAttrString
>> (./libvtkCommonPythonD.so)
>> undefined symbol: PyString_FromStringAndSize
>> (./libvtkCommonPythonD.so)
>> undefined symbol: PyGILState_Release (./libvtkCommonPythonD.so)
>> undefined symbol: PyCallable_Check (./libvtkCommonPythonD.so)
>> undefined symbol: PyList_SetItem (./libvtkCommonPythonD.so)
>> undefined symbol: PyDict_DelItem (./libvtkCommonPythonD.so)
>> undefined symbol: PyTuple_GetItem (./libvtkCommonPythonD.so)
>> undefined symbol: _ZN12vtkDirectory16GetNumberOfFilesEv
>> (./libvtkCommonPythonD.so)
>> undefined symbol: PyDict_New (./libvtkCommonPythonD.so)
>> undefined symbol: PyList_Sort (./libvtkCommonPythonD.so)
>> undefined symbol: PyErr_Clear (./libvtkCommonPythonD.so)
>> undefined symbol: PyString_AsString (./libvtkCommonPythonD.so)
>> undefined symbol: PyString_FromString (./libvtkCommonPythonD.so)
>> undefined symbol: PyList_New (./libvtkCommonPythonD.so)
>> undefined symbol: PyFloat_AsDouble (./libvtkCommonPythonD.so)
>> undefined symbol: PyDict_GetItem (./libvtkCommonPythonD.so)
>> undefined symbol: PyModule_GetDict (./libvtkCommonPythonD.so)
>> undefined symbol: PyString_InternFromString
>> (./libvtkCommonPythonD.so)
>> undefined symbol: PyTuple_Size (./libvtkCommonPythonD.so)
>> undefined symbol: Py_FatalError (./libvtkCommonPythonD.so)
>> undefined symbol: PyType_IsSubtype (./libvtkCommonPythonD.so)
>> undefined symbol: PyLong_FromUnsignedLong
>> (./libvtkCommonPythonD.so)
>> undefined symbol: PyEval_CallObjectWithKeywords
>> (./libvtkCommonPythonD.so)
>> undefined symbol: PyLong_AsLongLong (./libvtkCommonPythonD.so)
>> undefined symbol: PyInt_AsLong (./libvtkCommonPythonD.so)
>> undefined symbol: PyErr_Print (./libvtkCommonPythonD.so)
>> undefined symbol: PyArg_VaParse (./libvtkCommonPythonD.so)
>> undefined symbol: PyCFunction_NewEx (./libvtkCommonPythonD.so)
>> undefined symbol: PyDict_GetItemString (./libvtkCommonPythonD.so)
>> undefined symbol: PyTuple_GetSlice (./libvtkCommonPythonD.so)
>> undefined symbol: Py_Exit (./libvtkCommonPythonD.so)
>> undefined symbol: PyFloat_FromDouble (./libvtkCommonPythonD.so)
>> undefined symbol: PyArg_ParseTuple (./libvtkCommonPythonD.so)
>> undefined symbol: PyMethod_New (./libvtkCommonPythonD.so)
>> undefined symbol: PyTuple_New (./libvtkCommonPythonD.so
>>
>> ----- Original Message -----
>> From: Burlen Loring <burlen.loring at kitware.com>
>> Date: Thursday, October 16, 2008 11:48 am
>> Subject: Re: [vtkusers] undefined reference
>> To: Yenan Qu <yq07 at fsu.edu>
>> Cc: vtkusers at vtk.org
>>
>>
>>> Its clearly a linking issue, what is the output of the command:
>>>
>>> ldd -r /path/to/your/vtk/libs/libvtkCommonPythonD.so
>>>
>>>
>>>
>>> Yenan Qu wrote:
>>>
>>>> Nobody really had the same problem?
>>>>
>>>> ----- Original Message -----
>>>> From: Yenan Qu <yq07 at fsu.edu>
>>>> Date: Wednesday, October 15, 2008 12:03 pm
>>>> Subject: [vtkusers] undefined reference
>>>> To: vtkusers at vtk.org
>>>>
>>>>
>>>>> Hi, all,
>>>>>
>>>>> I have built the vtk5.0.4 without problem. But, when I compile
>>>>>
>>> my
>>>>> code with the new VTK, I got the error below"
>>>>>
>>>>> /home/yenanqu/VTK-BUILD/lib/libvtkCommonPythonD.so: undefined
>>>>> reference to `vtkDirectory::FileIsDirectory(char const*)'
>>>>> /home/yenanqu/VTK-BUILD/lib/libvtkCommonPythonD.so: undefined
>>>>> reference to `vtkObject::RemoveAllObservers()'
>>>>>
>>>>> I have check vtk source code for both .h and . cxx, the methods
>>>>> vtkDirectory::FileIsDirectory and tkObject::RemoveAllObservers()
>>>>> are well delcared and difined there without differences from
>>>>> others. Does any one know why it wasn't just builded in to the
>>>>>
>>> lib?>> Thank you in advance.
>>>
>>>>> Yenan
>>>>>
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>>>>
>>> --
>>> Burlen Loring
>>> Kitware, Inc.
>>> R&D Engineer
>>> 28 Corporate Drive
>>> Clifton Park, NY 12065-8662
>>> Phone: 518-371-3971 x137
>>>
>>>
>>>
>
>
--
Burlen Loring
Kitware, Inc.
R&D Engineer
28 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-371-3971 x137
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