[vtkusers] undefined reference

[Yenan Qu]

Here is the Output:
        libvtkCommon.so.5.0 => /usr/lib64/libvtkCommon.so.5.0 (0x00002aaaaad7b000)
        libvtksys.so.5.0 => /usr/lib64/libvtksys.so.5.0 (0x00002aaaab019000)
        libpthread.so.0 => /lib64/libpthread.so.0 (0x00002aaaab13c000)
        libdl.so.2 => /lib64/libdl.so.2 (0x00002aaaab255000)
        libstdc++.so.6 => /usr/lib64/libstdc++.so.6 (0x00002aaaab359000)
        libm.so.6 => /lib64/libm.so.6 (0x00002aaaab558000)
        libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x00002aaaab6da000)
        libc.so.6 => /lib64/libc.so.6 (0x00002aaaab7e7000)
        /lib64/ld-linux-x86-64.so.2 (0x0000555555554000)
undefined symbol: PyExc_RuntimeError    (./libvtkCommonPythonD.so)
undefined symbol: _Py_NoneStruct        (./libvtkCommonPythonD.so)
undefined symbol: PyString_Type (./libvtkCommonPythonD.so)
undefined symbol: PyExc_KeyboardInterrupt       (./libvtkCommonPythonD.so)
undefined symbol: PyLong_Type   (./libvtkCommonPythonD.so)
undefined symbol: PyExc_ValueError      (./libvtkCommonPythonD.so)
undefined symbol: PyExc_TypeError       (./libvtkCommonPythonD.so)
undefined symbol: PyTuple_Type  (./libvtkCommonPythonD.so)
undefined symbol: PyExc_AttributeError  (./libvtkCommonPythonD.so)
undefined symbol: PyCFunction_Type      (./libvtkCommonPythonD.so)
undefined symbol: PyDict_Type   (./libvtkCommonPythonD.so)
undefined symbol: PyType_Type   (./libvtkCommonPythonD.so)
undefined symbol: PyInt_FromLong        (./libvtkCommonPythonD.so)
undefined symbol: PyEval_GetGlobals     (./libvtkCommonPythonD.so)
undefined symbol: PyDict_DelItemString  (./libvtkCommonPythonD.so)
undefined symbol: PyObject_Free (./libvtkCommonPythonD.so)
undefined symbol: PySequence_GetItem    (./libvtkCommonPythonD.so)
undefined symbol: Py_AtExit     (./libvtkCommonPythonD.so)
undefined symbol: PyErr_ExceptionMatches        (./libvtkCommonPythonD.so)
undefined symbol: _ZN12vtkDirectory15FileIsDirectoryEPKc        (./libvtkCommonPythonD.so)
undefined symbol: PyDict_SetItemString  (./libvtkCommonPythonD.so)
undefined symbol: _ZN9vtkObject18RemoveAllObserversEv   (./libvtkCommonPythonD.so)
undefined symbol: Py_BuildValue (./libvtkCommonPythonD.so)
undefined symbol: PyObject_ClearWeakRefs        (./libvtkCommonPythonD.so)
undefined symbol: PyErr_SetString       (./libvtkCommonPythonD.so)
undefined symbol: PyDict_SetItem        (./libvtkCommonPythonD.so)
undefined symbol: PyLong_FromLong       (./libvtkCommonPythonD.so)
undefined symbol: PySequence_SetItem    (./libvtkCommonPythonD.so)
undefined symbol: Py_InitModule4        (./libvtkCommonPythonD.so)
undefined symbol: _PyObject_New (./libvtkCommonPythonD.so)
undefined symbol: PyArg_ParseTupleAndKeywords   (./libvtkCommonPythonD.so)
undefined symbol: PyGILState_Ensure     (./libvtkCommonPythonD.so)
undefined symbol: _PyString_Resize      (./libvtkCommonPythonD.so)
undefined symbol: PyObject_GetAttrString        (./libvtkCommonPythonD.so)
undefined symbol: PyString_FromStringAndSize    (./libvtkCommonPythonD.so)
undefined symbol: PyGILState_Release    (./libvtkCommonPythonD.so)
undefined symbol: PyCallable_Check      (./libvtkCommonPythonD.so)
undefined symbol: PyList_SetItem        (./libvtkCommonPythonD.so)
undefined symbol: PyDict_DelItem        (./libvtkCommonPythonD.so)
undefined symbol: PyTuple_GetItem       (./libvtkCommonPythonD.so)
undefined symbol: _ZN12vtkDirectory16GetNumberOfFilesEv (./libvtkCommonPythonD.so)
undefined symbol: PyDict_New    (./libvtkCommonPythonD.so)
undefined symbol: PyList_Sort   (./libvtkCommonPythonD.so)
undefined symbol: PyErr_Clear   (./libvtkCommonPythonD.so)
undefined symbol: PyString_AsString     (./libvtkCommonPythonD.so)
undefined symbol: PyString_FromString   (./libvtkCommonPythonD.so)
undefined symbol: PyList_New    (./libvtkCommonPythonD.so)
undefined symbol: PyFloat_AsDouble      (./libvtkCommonPythonD.so)
undefined symbol: PyDict_GetItem        (./libvtkCommonPythonD.so)
undefined symbol: PyModule_GetDict      (./libvtkCommonPythonD.so)
undefined symbol: PyString_InternFromString     (./libvtkCommonPythonD.so)
undefined symbol: PyTuple_Size  (./libvtkCommonPythonD.so)
undefined symbol: Py_FatalError (./libvtkCommonPythonD.so)
undefined symbol: PyType_IsSubtype      (./libvtkCommonPythonD.so)
undefined symbol: PyLong_FromUnsignedLong       (./libvtkCommonPythonD.so)
undefined symbol: PyEval_CallObjectWithKeywords (./libvtkCommonPythonD.so)
undefined symbol: PyLong_AsLongLong     (./libvtkCommonPythonD.so)
undefined symbol: PyInt_AsLong  (./libvtkCommonPythonD.so)
undefined symbol: PyErr_Print   (./libvtkCommonPythonD.so)
undefined symbol: PyArg_VaParse (./libvtkCommonPythonD.so)
undefined symbol: PyCFunction_NewEx     (./libvtkCommonPythonD.so)
undefined symbol: PyDict_GetItemString  (./libvtkCommonPythonD.so)
undefined symbol: PyTuple_GetSlice      (./libvtkCommonPythonD.so)
undefined symbol: Py_Exit       (./libvtkCommonPythonD.so)
undefined symbol: PyFloat_FromDouble    (./libvtkCommonPythonD.so)
undefined symbol: PyArg_ParseTuple      (./libvtkCommonPythonD.so)
undefined symbol: PyMethod_New  (./libvtkCommonPythonD.so)
undefined symbol: PyTuple_New   (./libvtkCommonPythonD.so

----- Original Message -----
From: Burlen Loring <burlen.loring at kitware.com>
Date: Thursday, October 16, 2008 11:48 am
Subject: Re: [vtkusers] undefined reference
To: Yenan Qu <yq07 at fsu.edu>
Cc: vtkusers at vtk.org

> Its clearly a linking issue, what is the output of the command:
> 
> ldd -r /path/to/your/vtk/libs/libvtkCommonPythonD.so
> 
> 
> 
> Yenan Qu wrote:
> > Nobody really had the same problem?
> >
> > ----- Original Message -----
> > From: Yenan Qu <yq07 at fsu.edu>
> > Date: Wednesday, October 15, 2008 12:03 pm
> > Subject: [vtkusers] undefined reference
> > To: vtkusers at vtk.org
> >
> >   
> >> Hi, all,
> >>
> >> I have built the vtk5.0.4  without problem. But, when I compile 
> my 
> >> code with  the new VTK, I got the error below"
> >>
> >> /home/yenanqu/VTK-BUILD/lib/libvtkCommonPythonD.so: undefined 
> >> reference to `vtkDirectory::FileIsDirectory(char const*)'
> >> /home/yenanqu/VTK-BUILD/lib/libvtkCommonPythonD.so: undefined 
> >> reference to `vtkObject::RemoveAllObservers()'
> >>
> >> I have check vtk source code for both .h and . cxx, the methods 
> >> vtkDirectory::FileIsDirectory and tkObject::RemoveAllObservers() 
> >> are well delcared and difined there without differences from 
> >> others. Does any one know  why  it wasn't just builded in to the 
> lib?>> Thank you in advance.
> >>
> >> Yenan
> >>
> >> _______________________________________________
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> >>
> >>     
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> >   
> 
> 
> -- 
> Burlen Loring
> Kitware, Inc.
> R&D Engineer
> 28 Corporate Drive
> Clifton Park, NY 12065-8662
> Phone: 518-371-3971 x137
> 
>