[vtkusers] creating 3d model from set of images
Amy Squillacote
amy.squillacote at kitware.com
Wed Oct 18 14:31:51 EDT 2006
Here's the link for the on-line documentation about the DICOM reader in
VTK: http://www.vtk.org/doc/release/5.0/html/a01328.html.
- Amy
Dominik Szczerba wrote:
> OK I dont know exactly how to use the DICOM reader, but heard many
> times on the list that others use it. Did you check the mailing list
> archives? And remember to Update() your reader once set up.
> bye
> Dominik
>
> Bartlomiej Wilkowski wrote:
>> Thanks Dominik for answer,
>>
>> do you know how to use this DICOM reader in VTK? I don't need ImageJ
>> if there is easier way. I am creating the model with the code from
>> the example:
>>
>> /vtkVolume16Reader v16 = new vtkVolume16Reader();
>> v16.SetDataDimensions(512, 512);
>> v16.SetDataByteOrderToLittleEndian();
>> *v16.SetFilePrefix(VtkUtil.getVtkDataRoot() +
>> "/bwImages/bw");
>> * v16.SetImageRange(1, 91);
>> v16.SetDataSpacing(0.782*25.4, 0.782*25.4, 1.0);/
>>
>> //
>> Can I specify in SetFilePrefix exactly the folder with the DICOM
>> images or should I use some function to convert them before using?
>>
>>
>> thanks in advance
>>
>>
>> Bartek
>>
>> ---- Wiadomość Oryginalna ----
>> Od: Dominik Szczerba
>> Do: Bartlomiej Wilkowski
>> Kopia do: vtkusers at vtk.org
>> Data: Wed, 18 Oct 2006 15:46:11 +0200
>> Temat: Re: [vtkusers] creating 3d model from set of images
>>
>> > There is a dedicated DICOM reader in VTK.
>> > If you want to convert using ImageJ pay attention to endianness.
>> > The whole story works for sure.
>> > bye
>> > Dominik
>> >
>> > Bartlomiej Wilkowski wrote:
>> > > Hello everybody.
>> > >
>> > > I am making a 3d editor for images of the magnetic resonanse. I
>> have a set of 93 images (DICOM) lateral view (cuts) through the
>> patient's corp and I wanted to use vtk to create the interactive 3d
>> model of them.
>> > >
>> > > I saw the examples (Medical1 - Medical3) and tried to change in
>> the code only the path to mine images , data spacing and dimensions.
>> I can't see unfortunately any model then.
>> > >
>> > > As I am working in Java, I used ImageJ to convert the images to
>> other formats: RAW, JPEG, bitmaps but it is not working. Do anybody
>> of you has any idea what can be wrong? Maybe I should change sth
>> more in the code. I am a total begginer in vtk that's why I am
>> asking,
>> > >
>> > > thanks!
>> > >
>> > > Bartek
>> > >
>> > > _______________________________________________
>> > > This is the private VTK discussion list.
>> > > Please keep messages on-topic. Check the FAQ at:
>> http://www.vtk.org/Wiki/VTK_FAQ
>> > > Follow this link to subscribe/unsubscribe:
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>> >
>> > --
>> > Dominik Szczerba, Ph.D.
>> > Computer Vision Lab, ETH
>> > http://www.vision.ee.ethz.ch/~domi
>> >
>>
>>
>>
>> ------------------------------------------------------------------------
>>
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