[vtk-developers] ParaView HDF5 migration to VTK

David Partyka david.partyka at kitware.com
Wed Mar 9 12:29:00 EST 2011


Yes that is my intention. The first step was to get it into VTK.

On Wed, Mar 9, 2011 at 11:55 AM, David Gobbi <david.gobbi at gmail.com> wrote:

> I also have a question about hdf5... is VTK's netcdf going to be modified
> so that it builds against hdf5?  A major feature of netcdf is that it can
> use
> hdf5 as its storage layer, but this feature is missing from VTK's netcdf.
>
>  - David
>
>
> On Wed, Mar 9, 2011 at 9:32 AM, David Partyka <david.partyka at kitware.com>
> wrote:
> > Sorry, I had forgotten about this. Do you mind reporting a bug and
> assigning
> > it to me. I'll try and get it done in the next few days. We have a macro
> > that does this kind of testing in CMake\vtkCheckCXXAcceptsFlags.cmake
> that I
> > can either call in the vtkhdf5 code or adapt it slightly to make the
> changes
> > to vtkhdf5 minimal.
> > Thanks!
> >
> > On Wed, Mar 9, 2011 at 11:19 AM, Sean McBride <sean at rogue-research.com>
> > wrote:
> >>
> >> David,
> >>
> >> Any news on no longer blindly adding the -std=c99 flag?
> >>
> >> Sean
> >>
> >>
> >> On Wed, 2 Feb 2011 18:38:22 -0500, David Partyka said:
> >>
> >> >Though the comment is exactly rigth, those should be compiler checks
> and
> >> > not
> >> >just near blindly appended to CMAKE_C_FLAGS.
> >> >
> >> >On Wed, Feb 2, 2011 at 6:33 PM, David Partyka
> >> ><david.partyka at kitware.com>wrote:
> >> >
> >> >> I will fix the install rule. Is there a good CMake way to detect
> clang?
> >> >> Id
> >> >> prefer to make any fix as invasive as possible to minimize deviating
> >> >> from
> >> >> upstream.
> >> >>
> >> >>
> >> >> On Wed, Feb 2, 2011 at 6:27 PM, Sean McBride <sean at rogue-
> >> research.com>wrote:
> >> >>
> >> >>> On Mon, 20 Dec 2010 15:54:50 -0500, Dave Partyka said:
> >> >>>
> >> >>> >I have just merged commits to VTK and ParaView that move ParaView's
> >> >>> > HDF5
> >> >>> >into VTK. This migration makes it possible for VTK developers to
> >> >>> > begin
> >> >>> using
> >> >>> >HDF5 storage in their own VTK classes and will also allow us to
> >> >>> > enable
> >> >>> HDF5
> >> >>> >functionality in other Utilities (such as HDF5 enabled NetCDF).
> HDF5
> >> >>> > is
> >> >>> >located under Utilities/vtkhdf5. This version of HDF5 is the same
> >> >>> > that
> >> >>> was
> >> >>> >in ParaView (1.8.5) but now is also mangled with vtk as a prefix.
> >> >>> >
> >> >>> >I strongly recommend that ParaView developers do a clean build
> after
> >> >>> pulling
> >> >>> >these changes to reduce the likelihood of build failures. We will
> be
> >> >>> >watching the dashboard carefully for the next few days. If anyone
> >> >>> >experiences any issues please feel free to let us know and/or
> report
> >> >>> > a
> >> >>> bug.
> >> >>>
> >> >>> Dave,
> >> >>>
> >> >>> 1) when installing vtk (master) most all .h files go into /include/
> >> >>> vtk-5.9, except a bunch of H5*.h files go directly into /include.
>  Is
> >> >>> that a bug?
> >> >>>
> >> >>> 2) Building vtk with clang reports:
> >> >>>
> >> >>> clang: warning: argument unused during compilation: '-std=c99'
> >> >>>
> >> >>> This appears to come from Utilities/vtkhdf5/CMakeLists.txt
> >> >>>
> >> >>>
> >> >>> #---------------------------------
> >> >--------------------------------------------
> >> >>> # Compiler specific flags : Shouldn't there be compiler tests for
> >> >>> these
> >> >>>
> >> >>> #---------------------------------
> >> >--------------------------------------------
> >> >>> IF (NOT WIN32)
> >> >>>  SET (CMAKE_C_FLAGS "${CMAKE_ANSI_CFLAGS} ${CMAKE_C_FLAGS} -std=c99
> -
> >> >>> fomit-frame-pointer -finline-functions -fno-common")
> >> >>> ENDIF (NOT WIN32)
> >> >>>
> >> >>> I believe the comment is correct. :)
> >> >>>
> >> >>> --
> >> >>> ____________________________________________________________
> >> >>> Sean McBride, B. Eng                 sean at rogue-research.com
> >> >>> Rogue Research                        www.rogue-research.com
> >> >>> Mac Software Developer              Montréal, Québec, Canada
> >>
> >>
> >
> >
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