[Ves] Activating vtkxdmf in vtk-android build

[Aashish Chaudhary]

Android passwd struct does not have pw_gecos

Look at this patch

https://github.com/nathan-osman/AndroX/blob/ad64b792791e1088e40444037402605e17949865/src/patch/openssh.patch


On Fri, Aug 23, 2013 at 9:54 AM, David E DeMarle
<dave.demarle at kitware.com>wrote:

> You might be the first to compile hdf5 onto android. We cross compile xdmf
> and hdf5  frequently, but only for supercomputer tool chains (cray-gnu and
> bluegene-xlc specifically).
>
> As far as I know there is no easy way to remove the hdf5 dependency from
> xdmf. xdmf's premise is to be a front end for hdf5 and the binary back end
> was added afterward. So it will likely take a bit of hacking to take it
> out. Since the back end is componentized though, it should be possible.
>
>
> David E DeMarle
> Kitware, Inc.
> R&D Engineer
> 21 Corporate Drive
> Clifton Park, NY 12065-8662
> Phone: 518-881-4909
>
>
> On Fri, Aug 23, 2013 at 9:28 AM, Casey Goodlett <
> casey.goodlett at kitware.com> wrote:
>
>> Felipe,
>>
>> I have not tried to enable xdmf support in a cross-compile environment.
>> I added the VTK developers list in case someone on that list has insight on
>> this compilation problem.
>>
>> Thank you
>>
>>
>> On Thu, Aug 22, 2013 at 9:56 AM, Felipe Bordeu Weldt <
>> felipe.bordeu at ec-nantes.fr> wrote:
>>
>>> Hello,
>>>
>>> Thanks Pat for the excellent webinar about VES Android, I'm trying to
>>> build my vtk class (a reader) (using the VTK module, with a symbolic link
>>> to my readers directory).
>>> My reader depends on the vtkxdmf2 that needs hdf5 support.
>>>
>>> first error building h5
>>>
>>> [ 31%] Building C object
>>> ThirdParty/hdf5/vtkhdf5/src/CMakeFiles/H5detect.dir/H5detect.c.o
>>> /work/VES/Apps/Android/CMakeBuild/build/CMakeExternals/Source/vtk/ThirdParty/hdf5/vtkhdf5/src/H5detect.c:
>>> In function 'print_header':
>>> /work/VES/Apps/Android/CMakeBuild/build/CMakeExternals/Source/vtk/ThirdParty/hdf5/vtkhdf5/src/H5detect.c:1204:29:
>>> error: 'struct passwd' has no member named 'pw_gecos'
>>> make[2]: ***
>>> [ThirdParty/hdf5/vtkhdf5/src/CMakeFiles/H5detect.dir/H5detect.c.o] Erreur 1
>>> make[1]: *** [ThirdParty/hdf5/vtkhdf5/src/CMakeFiles/H5detect.dir/all]
>>> Erreur 2
>>> make: *** [all] Erreur 2
>>>
>>> [ 31%] Building C object
>>> ThirdParty/hdf5/vtkhdf5/src/CMakeFiles/H5make_libsettings.dir/H5make_libsettings.c.o
>>> /Big/fbordeu/VES/Apps/Android/CMakeBuild/build/CMakeExternals/Source/vtk/ThirdParty/hdf5/vtkhdf5/src/H5make_libsettings.c:
>>> In function 'print_header':
>>> /Big/fbordeu/VES/Apps/Android/CMakeBuild/build/CMakeExternals/Source/vtk/ThirdParty/hdf5/vtkhdf5/src/H5make_libsettings.c:186:18:
>>> error: 'struct passwd' has no member named 'pw_gecos'
>>> make[2]: ***
>>> [ThirdParty/hdf5/vtkhdf5/src/CMakeFiles/H5make_libsettings.dir/H5make_libsettings.c.o]
>>> Erreur 1
>>> make[1]: ***
>>> [ThirdParty/hdf5/vtkhdf5/src/CMakeFiles/H5make_libsettings.dir/all] Erreur 2
>>> make: *** [all] Erreur 2
>>>
>>> to solve these error I just commented the offending lines (leaving the
>>> code like without H5_HAVE_GETPWUID)
>>>
>>> then the generation of the file
>>> ./VTK/ThirdParty/hdf5/vtkhdf5/H5lib_settings.c failed
>>> so I copied from the vtk-host folder to the vtk-android
>>>
>>> now I have a this error:
>>>
>>> ...
>>> [ 47%] Built target H5make_libsettings
>>> [ 47%] Building C object
>>> ThirdParty/hdf5/vtkhdf5/src/CMakeFiles/vtkhdf5.dir/H5Tconv.c.o
>>> /Big/fbordeu/VES/Apps/Android/CMakeBuild/build/CMakeExternals/Source/vtk/ThirdParty/hdf5/vtkhdf5/src/H5Tconv.c:
>>> In function 'vtk__H5T_conv_llong_int':
>>> /Big/fbordeu/VES/Apps/Android/CMakeBuild/build/CMakeExternals/Source/vtk/ThirdParty/hdf5/vtkhdf5/src/H5Tconv.c:7203:1:
>>> internal compiler error: in get_arm_condition_code, at
>>> config/arm/arm.c:17187
>>> Please submit a full bug report,
>>> with preprocessed source if appropriate.
>>> See <http://gcc.gnu.org/bugs.html> for instructions.
>>> make[2]: ***
>>> [ThirdParty/hdf5/vtkhdf5/src/CMakeFiles/vtkhdf5.dir/H5Tconv.c.o] Erreur 1
>>> make[1]: *** [ThirdParty/hdf5/vtkhdf5/src/CMakeFiles/vtkhdf5.dir/all]
>>> Erreur 2
>>> make: *** [all] Erreur 2
>>>
>>>
>>> I'm not an expert of compiling for android. I'm stuck here.
>>>
>>> Is there any way of building the XMDF library without H5 support, only
>>> ascii and binary support is enough for me ???
>>>
>>> Thanks
>>> Felipe.
>>>
>>> _______________________________________________
>>> Ves mailing list
>>> Ves at public.kitware.com
>>> http://public.kitware.com/cgi-bin/mailman/listinfo/ves
>>>
>>
>>
>>
>> --
>> Casey B. Goodlett, Ph.D.
>> R&D Engineer
>> Kitware, Inc. - North Carolina Office
>> http://www.kitware.com
>> (919) 969-6990 x310
>>
>> _______________________________________________
>> Ves mailing list
>> Ves at public.kitware.com
>> http://public.kitware.com/cgi-bin/mailman/listinfo/ves
>>
>>
>
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> http://public.kitware.com/cgi-bin/mailman/listinfo/ves
>
>


-- 
| Aashish Chaudhary
| R&D Engineer
| Kitware Inc.
| www.kitware.com
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