[Ves] HowTo: add third-party data to KiwiViewer 0.02

[Pat Marion]

Thanks!  I've added these instructions to the wiki page and linked to them
from the Developer's Guide page.

   http://www.vtk.org/Wiki/VES/Brain_Atlas_Demo

Pat

On Mon, Jan 23, 2012 at 7:37 PM, Stoner, Richard <rstoner at ucsd.edu> wrote:

>  Hi,
>
>  Thanks to guidance from Pat Marion and the rest of the VES team, I've
> been able to build and use the PNL-SPL brain atlas (
> http://www.spl.harvard.edu/publications/item/view/1265) on iOS 5.0 as
> seen in the youtube video and pictured at
> http://www.vtk.org/Wiki/File:KiwiViewer_BrainAtlas.png
>
>  Below is a basic walk through.
>
>  ==0. Install dependencies==
>
>  I recommend using homebrew to install these packages on OSX. To install,
> follow the instructions at http://mxcl.github.com/homebrew/.  Homebrew is
> a package manager for OSX (similar to apt/aptitude/yum/etc).
>
>  '''Dependencies'''
>
>  * cmake
> :: brew install cmake
>
> * git
> :: brew install git
>
>  * xcode
> :: http://itunes.apple.com/us/app/xcode/id448457090?mt=12
>
>  ==1. Clone the code from the git repository==
>
>  :: git clone git://vtk.org/VES.git
>
>  ==2. Configure iOS superbuild==
>
>  :: cd VES/Apps/iOS/CMakeBuild
>
>  :: cmake -P configure.cmake
>
>  ==3. Build iOS superbuild
>
>  :: cd build
>
>  :: make -j4
>
>  This will take some time. It will download vtkmodular and the Eigen
> mathematics library
>
>  ==4. Adding extra datasets==
>
>  * In the folder VES/src/vtkVES, open the file 'vesKiwiViewerApp.cpp' in
> your favorite editor.
> * Uncomment lines 160-161 and lines 592-602
> * Save the file.
>
>  ==5. Rebuilding with updating code
>
>  * Return to the build directory (should be VES/Apps/iOS/CMakeBuild/build)
> * Rebuild the modular VES for iOS device and simulator
>
>  :: make ves-ios-device
> :: make ves-ios-simulator
>
>  ==6. Copy external data to data folder==
>
>  The external data is hosted on Midas at
> http://midas.kitware.com/item/view/726
>
>  :: [http://midas.kitware.com/bitstream/view/17407kiwiviewer_spl_pnl_brain_atlas.tgz]
> :: [http://midas.kitware.com/bitstream/view/17408 kiwiviewer_can_data.tgz]
>
>  The SPL Brain Atlas is licensed under the following:
>
>  ''Please note that the data is being distributed under the Slicer
> license. By downloading these data, you agree to acknowledge our
> contribution in any of your publications that result form the use of this
> atlas. Please acknowledge the following grants: P41 RR13218, R01 MH050740.''
>
>  * Download and extract the SPL brain atlas and Can simulation to the
> folder VES/Apps/iOS/Kiwi/Kiwi/Data (each vtp file should be the Data
> folder, not a subfolder)
>
>  ==7. Add data to project==
>
>  * Open the Kiwi Xcode project located at VES/Apps/iOS/Kiwi/Kiwi.xcodeproj
>
>  * Drag & drop the new files in the VES/Apps/iOS/Kiwi/Kiwi/Data into the
> 'Data" folder in the Xcode project.
>
>
>  * Tap "Run"
>
>  The KiwiViewer application should launch in the iOS simulator. Tap on
> the folder in the lower right corner to select the SPL Brain or Can
> dataset.
>
>  With the SPL Brain view loaded, a single tap toggles between different
> views. Tap on the clip plane manipulator to rotate the plane. Tap on the
> clip plane and drag to adjust its position.
>
>
>  Let me know if I missed something. Good luck'
>
>
>  Rich Stoner
> Postdoctoral Fellow
> UCSD Autism Center of Excellence
>
> _______________________________________________
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> http://public.kitware.com/cgi-bin/mailman/listinfo/ves
>
>
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