[Tomviz] Adding a file reader to Tomviz
nathan1hughes at gmail.com
Mon Jan 29 18:56:26 EST 2018
At the end of last year, our paper was published (https://plantmethods.
biomedcentral.com/articles/10.1186/s13007-017-0229-8) and I used Tomviz for
a lot of visual analysis.
I'm currently in the process of moving a lot of my segmentation methods
from MATLAB into Python and I would like to use Tomviz further. However we
use a Scanco MicroCT scanner which produces a proprietary ISQ file format.
I have written a file reader for it, both in Python and MATLAB, I could
also rewrite it in C/C++ if needed and would like to add it to Tomviz as it
would be extremely useful for my Institute to use for a lot of our
projects, I also know others in my field who would appreciate this addition
Would someone be able to advise on how I could go about making this
addition to the Tomviz software? Obviously, I can navigate the code, I just
want to do this correctly and in a way in which I can feed this back to
other users on Github.
Mostly I am unsure of which specific files are needed to be altered in
order to accept another file type and how to point to the function to
As you can see here: https://gist.github.com/SirSharpest/
fd0a039547eb4ca5f00b02de1216917f it's a straightforward process (this is
just a quick example).
Hope I can get some advise on this.
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