<html xmlns:v="urn:schemas-microsoft-com:vml" xmlns:o="urn:schemas-microsoft-com:office:office" xmlns:w="urn:schemas-microsoft-com:office:word" xmlns:m="http://schemas.microsoft.com/office/2004/12/omml" xmlns="http://www.w3.org/TR/REC-html40"><head><meta http-equiv=Content-Type content="text/html; charset=utf-8"><meta name=Generator content="Microsoft Word 15 (filtered medium)"><style><!--
/* Font Definitions */
@font-face
{font-family:"Cambria Math";
panose-1:2 4 5 3 5 4 6 3 2 4;}
@font-face
{font-family:Calibri;
panose-1:2 15 5 2 2 2 4 3 2 4;}
/* Style Definitions */
p.MsoNormal, li.MsoNormal, div.MsoNormal
{margin:0cm;
margin-bottom:.0001pt;
font-size:11.0pt;
font-family:"Calibri",sans-serif;}
a:link, span.MsoHyperlink
{mso-style-priority:99;
color:blue;
text-decoration:underline;}
a:visited, span.MsoHyperlinkFollowed
{mso-style-priority:99;
color:purple;
text-decoration:underline;}
p.msonormal0, li.msonormal0, div.msonormal0
{mso-style-name:msonormal;
mso-margin-top-alt:auto;
margin-right:0cm;
mso-margin-bottom-alt:auto;
margin-left:0cm;
font-size:11.0pt;
font-family:"Calibri",sans-serif;}
span.StileMessaggioDiPostaElettronica18
{mso-style-type:personal-reply;
font-family:"Calibri",sans-serif;
color:windowtext;}
.MsoChpDefault
{mso-style-type:export-only;
font-family:"Calibri",sans-serif;
mso-fareast-language:EN-US;}
@page WordSection1
{size:612.0pt 792.0pt;
margin:70.85pt 2.0cm 2.0cm 2.0cm;}
div.WordSection1
{page:WordSection1;}
--></style><!--[if gte mso 9]><xml>
<o:shapedefaults v:ext="edit" spidmax="1026" />
</xml><![endif]--><!--[if gte mso 9]><xml>
<o:shapelayout v:ext="edit">
<o:idmap v:ext="edit" data="1" />
</o:shapelayout></xml><![endif]--></head><body lang=IT link=blue vlink=purple><div class=WordSection1><p class=MsoNormal><span lang=EN-GB style='mso-fareast-language:EN-US'>Dear Simon,<br><br>I have forked RTK and pushed a <a href="https://github.com/GabrieleBelotti/RTK/commit/cd8ef6dc31a987925949da01f4340810f3b85710">commit</a> which took all major changes from this </span><a href="https://github.com/SimonRit/RTK/commit/dc987fca11ae283b07547af19efcd26ad377a4da" target="_blank"><span lang=EN-GB>commit</span></a> <span lang=EN-GB>and I hope I correctly added a RTK_USE_BUNZIP2 preprocessor option in rtkConfiguration.h, and in the HncImageIO files.<br>I hope this is fine, I can’t test it with my current ITK build, but if there’s something I missed or got wrong please let me know (I’m just a newbie).<br><br>Gabriele</span><span lang=EN-GB style='mso-fareast-language:EN-US'><o:p></o:p></span></p><p class=MsoNormal><span lang=EN-GB style='mso-fareast-language:EN-US'><o:p> </o:p></span></p><p class=MsoNormal style='margin-left:35.4pt'><b>Da:</b> Simon Rit <simon.rit@creatis.insa-lyon.fr> <br><b>Inviato:</b> mercoledì 20 novembre 2019 11.37<br><b>A:</b> gabriele.belotti.bergamo@gmail.com<br><b>Cc:</b> rtk-users <rtk-users@public.kitware.com><br><b>Oggetto:</b> Re: [Rtk-users] HNC reader<o:p></o:p></p><p class=MsoNormal style='margin-left:35.4pt'><o:p> </o:p></p><div><div><p class=MsoNormal style='margin-left:35.4pt'>I think I would first check if there is some code to bunzip on ITK's side (it's not very clear from a quick search in the repo).<o:p></o:p></p></div><div><p class=MsoNormal style='margin-left:35.4pt'>If not, then I'll indeed create a cmake option (e.g., RTK_USE_BUNZIP2) and include the code when activated. You can avoid compiling the cxx files from cmake but you'll probably need a preprocessor option in <a href="https://github.com/SimonRit/RTK/blob/master/rtkConfiguration.h.in">rtkConfiguration.h</a> (as e.g. RTK_USE_CUDA). <o:p></o:p></p></div><div><p class=MsoNormal style='margin-left:35.4pt'>Don't hesitate to submit a work in progress as a PR if you need some help.<o:p></o:p></p></div><div><p class=MsoNormal style='margin-left:35.4pt'>Thanks!<o:p></o:p></p></div><div><p class=MsoNormal style='margin-left:35.4pt'>Simon<o:p></o:p></p></div></div><p class=MsoNormal style='margin-left:35.4pt'><o:p> </o:p></p><div><div><p class=MsoNormal style='margin-left:35.4pt'>On Wed, Nov 20, 2019 at 11:26 AM <<a href="mailto:gabriele.belotti.bergamo@gmail.com">gabriele.belotti.bergamo@gmail.com</a>> wrote:<o:p></o:p></p></div><blockquote style='border:none;border-left:solid #CCCCCC 1.0pt;padding:0cm 0cm 0cm 6.0pt;margin-left:4.8pt;margin-right:0cm'><div><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'>Thanks Simon!<br><span lang=EN-GB>I’m able to retrieve those codes for a start and that’s good! Currently I’m using 1.4.0 so I don’t have to fiddle around too much.<br>How would you go for making the bzip2 dependency optional? Maybe creating an option flag in CMake and editing the reader accordingly?<br>Gabriele </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'><span lang=EN-GB> </span><o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'><b>Da:</b> Simon Rit <<a href="mailto:simon.rit@creatis.insa-lyon.fr" target="_blank">simon.rit@creatis.insa-lyon.fr</a>> <br><b>Inviato:</b> mercoledì 20 novembre 2019 10.49<br><b>A:</b> <a href="mailto:gabriele.belotti.bergamo@gmail.com" target="_blank">gabriele.belotti.bergamo@gmail.com</a><br><b>Cc:</b> rtk-users <<a href="mailto:rtk-users@public.kitware.com" target="_blank">rtk-users@public.kitware.com</a>><br><b>Oggetto:</b> Re: [Rtk-users] HNC reader<o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'> <o:p></o:p></p><div><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'><span lang=EN-GB>Hi,</span><o:p></o:p></p></div><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'><span lang=EN-GB>I think there's been a confusion on my side when writing the release notes of RTK 1.4. I merged a pull request from Andreas Gravgaard who implemented the Xim reader based on the Hnc reader. There is a </span><a href="https://github.com/SimonRit/RTK/commit/dc987fca11ae283b07547af19efcd26ad377a4da" target="_blank"><span lang=EN-GB>commit</span></a><span lang=EN-GB> which includes Hnc but this other </span><a href="https://github.com/SimonRit/RTK/commit/9a1754f6e9f7d0257702fc9b48be724c74750990" target="_blank"><span lang=EN-GB>commit</span></a><span lang=EN-GB> deleted it before merging.</span><o:p></o:p></p></div><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'><span lang=EN-GB>See the related </span><a href="https://github.com/SimonRit/RTK/pull/72" target="_blank"><span lang=EN-GB>PR</span></a><span lang=EN-GB> and </span><a href="https://public.kitware.com/pipermail/rtk-users/2016-September/010334.html" target="_blank"><span lang=EN-GB>mailing list conversation</span></a><span lang=EN-GB>.</span><o:p></o:p></p></div><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'><span lang=EN-GB>We can probably include the reader in RTK if we can make the bzip2 dependency optional using Geoff's code.</span><o:p></o:p></p></div><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'><span lang=EN-GB>Sorry for the mess,</span><o:p></o:p></p></div><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'><span lang=EN-GB>Simon</span><o:p></o:p></p></div></div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'><span lang=EN-GB> </span><o:p></o:p></p><div><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'><span lang=EN-GB>On Wed, Nov 20, 2019 at 10:11 AM <</span><a href="mailto:gabriele.belotti.bergamo@gmail.com" target="_blank"><span lang=EN-GB>gabriele.belotti.bergamo@gmail.com</span></a><span lang=EN-GB>> wrote:</span><o:p></o:p></p></div><blockquote style='border:none;border-left:solid windowtext 1.0pt;padding:0cm 0cm 0cm 6.0pt;margin-left:4.8pt;margin-top:5.0pt;margin-right:0cm;margin-bottom:5.0pt;border-color:currentcolor currentcolor currentcolor rgb(204,204,204)'><div><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'><span lang=EN-GB>Dear RTK users,<br><br>There is mentions of a .hnc reader in the 1.4.0 release (</span><a href="https://www.openrtk.org/RTK/news/201802_release1.4.php" target="_blank"><span lang=EN-GB>https://www.openrtk.org/RTK/news/201802_release1.4.php</span></a><span lang=EN-GB>) but I can’t find it linked in any version I tried (1.4.0 and 2.0.0/1).<br>I think this may be a mistake so I wanted to raise the issue.<br><br>I hope this is useful for anyone other than me!<br><br>Gabriele</span><o:p></o:p></p></div></div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:35.4pt'><span lang=EN-GB>_______________________________________________<br>Rtk-users mailing list<br></span><a href="mailto:Rtk-users@public.kitware.com" target="_blank"><span lang=EN-GB>Rtk-users@public.kitware.com</span></a><span lang=EN-GB><br></span><a href="https://public.kitware.com/mailman/listinfo/rtk-users" target="_blank"><span lang=EN-GB>https://public.kitware.com/mailman/listinfo/rtk-users</span></a><o:p></o:p></p></blockquote></div></div></div></blockquote></div></div></body></html>