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<p class="MsoNormal">The NetCDF Generic/CF reader has an option named “Output Type” that you can use to force the output to a vtkImageData. Then Cory’s original programmable filter will work, and you won’t have to deal with the coordinates.<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">-Ken<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal" style="margin-left:.5in"><b><span style="font-size:12.0pt;color:black">From:
</span></b><span style="font-size:12.0pt;color:black">ParaView <paraview-bounces@public.kitware.com> on behalf of Cory Quammen <cory.quammen@kitware.com><br>
<b>Date: </b>Wednesday, May 2, 2018 at 11:19 AM<br>
<b>To: </b>"j.vanengelen1@uu.nl" <j.vanengelen1@uu.nl><br>
<b>Cc: </b>"paraview@public.kitware.com" <paraview@public.kitware.com><br>
<b>Subject: </b>[EXTERNAL] Re: [Paraview] generic NetCDFreader support for CellData<o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:.5in"><o:p> </o:p></p>
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<p class="MsoNormal" style="margin-left:.5in"><a name="_MailOriginalBody">On Wed, May 2, 2018 at 11:37 AM Engelen, J. van (Joeri) <</a><a href="mailto:j.vanengelen1@uu.nl"><span style="mso-bookmark:_MailOriginalBody">j.vanengelen1@uu.nl</span><span style="mso-bookmark:_MailOriginalBody"></span></a><span style="mso-bookmark:_MailOriginalBody">>
wrote:<o:p></o:p></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif;color:#1F497D">Thank you Cory,</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif;color:#1F497D"> </span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif;color:#1F497D">I sense this solution might work. However, the type of my data is “Rectilinear Grid”, not sure if that increases the complexity (dx = 1000,
dy = 1000, dz = 1).</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<p class="MsoNormal" style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody">Ah. From the documentation: "</span><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.5pt;font-family:"Arial",sans-serif;color:black;background:white">To
define a </span></span><span style="mso-bookmark:_MailOriginalBody"></span><a href="https://www.vtk.org/doc/nightly/html/classvtkRectilinearGrid.html" title="a dataset that is topologically regular with variable spacing in the three coordinate directions ..."><span style="mso-bookmark:_MailOriginalBody"><b><span style="font-size:10.5pt;font-family:"Arial",sans-serif;color:#4665A2;background:white;text-decoration:none">vtkRectilinearGrid</span></b></span><span style="mso-bookmark:_MailOriginalBody"></span></a><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.5pt;font-family:"Arial",sans-serif;color:black;background:white">,
you must specify the dimensions of the data and provide three arrays of values specifying the coordinates along the x-y-z axes". It should be a similar script, but you'd have to add an additional X, Y, and Z position at the end of those coordinate arrays.
So your script would look more like:</span></span><span style="mso-bookmark:_MailOriginalBody"><o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.5pt;font-family:Monaco;color:black">dims
</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.5pt;font-family:Monaco;color:#666666">=</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.5pt;font-family:Monaco;color:black"> inputs[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.5pt;font-family:Monaco;color:#666666">0</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.5pt;font-family:Monaco;color:black">]</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.5pt;font-family:Monaco;color:#666666">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.5pt;font-family:Monaco;color:black">GetDimensions()</span></span><span style="mso-bookmark:_MailOriginalBody"><o:p></o:p></span></p>
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<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">ext </span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">=</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white"> inputs[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">0</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">]</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">GetExtent()</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">output.SetDimensions(dims[0]+1, dims[1]+1, dims[2]+1)</span><span style="background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">output</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">SetExtent(ext[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">0</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">], ext[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">1</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">]</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">+1</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">, ext[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">2</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">], ext[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">3</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">]</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">+1</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">, ext[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">4</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">], ext[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">5</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">]</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">+1</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">)</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">inputPd </span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">=</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white"> inputs[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">0</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">]</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">GetPointData()</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">outputCd </span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">=</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white"> output</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">GetCellData()</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">outputCd</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">SetScalars(inputPd</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">GetScalars())</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white"><o:p> </o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><i><span style="font-family:Monaco;color:#408080;background:white"># Set coordinates</span></i><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">xCoords </span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">=</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white"> inputs[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">0</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">]</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">GetXCoordinates()</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">NewInstance()</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">xCoords</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">DeepCopy(inputs[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">0</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">]</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">GetXCoordinates())</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">xCoords</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">InsertNextValue(</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">1.0</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">) # Should a reasonable x value for your dataset larger than previous max x</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">output</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">SetXCoordinates(xCoords)</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white"><o:p> </o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">yCoords </span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">=</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white"> inputs[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">0</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">]</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">GetYCoordinates()</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">NewInstance()</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">yCoords</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">DeepCopy(inputs[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">0</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">]</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">GetYCoordinates())</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">yCoords</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">InsertNextValue(</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">1.5</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">) </span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;background:white"># Should be a reasonable like the x coordinate</span><span style="background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="color:black;background:white">output</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">SetYCoordinates(yCoords)</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white"><o:p> </o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">zCoords </span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">=</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white"> inputs[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">0</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">]</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">GetZCoordinates()</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">NewInstance()</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">zCoords</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">DeepCopy(inputs[</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">0</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">]</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">GetZCoordinates())</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">zCoords</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">InsertNextValue(</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">1.0</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">) </span><span style="color:black;background:white"># Should be a reasonable like the z coordinate<o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">output</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:#666666;background:white">.</span></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white">SetZCoordinates(zCoords)</span><span style="color:black;background:white"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-family:Monaco;color:black;background:white"><o:p> </o:p></span></span></pre>
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<p class="MsoNormal" style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.5pt;font-family:"Arial",sans-serif;color:black;background:white">Some extent information also needs to be supplied, but I'm not entirely clear
on how to do that correctly.</span></span><span style="mso-bookmark:_MailOriginalBody"><o:p></o:p></span></p>
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</span></span><span style="mso-bookmark:_MailOriginalBody"><o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.5pt;font-family:"Arial",sans-serif;color:black">A better solution would be to add an option to the reader to take care of this for you if that
is reasonable for your data.</span></span><span style="mso-bookmark:_MailOriginalBody"><o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.5pt;font-family:"Arial",sans-serif;color:black">Best,</span></span><span style="mso-bookmark:_MailOriginalBody"><o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.5pt;font-family:"Arial",sans-serif;color:black">Cory</span></span><span style="mso-bookmark:_MailOriginalBody"><o:p></o:p></span></p>
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</span></span><span style="mso-bookmark:_MailOriginalBody"><o:p></o:p></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif;color:#1F497D">Regardless, the script you provided does not give me output and it also does not throw an error, so I’m left a bit in the dark here.</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif;color:#1F497D"> </span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><b><span style="font-size:10.0pt;font-family:"Tahoma",sans-serif">From:</span></b></span><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.0pt;font-family:"Tahoma",sans-serif"> Cory Quammen [mailto:</span></span><a href="mailto:cory.quammen@kitware.com" target="_blank"><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.0pt;font-family:"Tahoma",sans-serif">cory.quammen@kitware.com</span></span><span style="mso-bookmark:_MailOriginalBody"></span></a><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.0pt;font-family:"Tahoma",sans-serif">]
<br>
<b>Sent:</b> Wednesday, May 02, 2018 5:01 PM<br>
<b>To:</b> Engelen, J. van (Joeri)<br>
<b>Cc:</b> </span></span><a href="mailto:paraview@public.kitware.com" target="_blank"><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.0pt;font-family:"Tahoma",sans-serif">paraview@public.kitware.com</span></span><span style="mso-bookmark:_MailOriginalBody"></span></a><span style="mso-bookmark:_MailOriginalBody"><span style="font-size:10.0pt;font-family:"Tahoma",sans-serif"><br>
<b>Subject:</b> Re: [Paraview] generic NetCDFreader support for CellData</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"> <o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB">Joeri,<o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"> <o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB">You can try the "Point Data to Cell Data" filter, but that averages the point data and places the results in the cell data. You may wind up with some incorrect values using that approach.<o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"> <o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB">Better would be to use a "Progammable Filter" to resize the cartesian grid read by the NetCDF reader and treat the point data as cell data. That is a bit involved, but not terrible. Set the Script
to<o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"> <o:p></o:p></span></span></p>
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<pre style="mso-margin-top-alt:9.0pt;margin-right:0in;margin-bottom:0in;margin-left:.5in;margin-bottom:.0001pt"><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:Monaco">dims <span style="color:#666666">=</span> inputs[<span style="color:#666666">0</span>]<span style="color:#666666">.</span>GetDimensions()</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:Monaco">ext <span style="color:#666666">=</span> inputs[<span style="color:#666666">0</span>]<span style="color:#666666">.</span>GetExtent()</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:Monaco">output<span style="color:#666666">.</span>SetDimensions(dims[<span style="color:#666666">0</span>]<span style="color:#666666">+1</span>, dims[<span style="color:#666666">1</span>]<span style="color:#666666">+1</span>, dims[<span style="color:#666666">2</span>]<span style="color:#666666">+1</span>)</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:Monaco">output<span style="color:#666666">.</span>SetExtent(ext[<span style="color:#666666">0</span>], ext[<span style="color:#666666">1</span>]<span style="color:#666666">+1</span>, ext[<span style="color:#666666">2</span>], ext[<span style="color:#666666">3</span>]<span style="color:#666666">+1</span>, ext[<span style="color:#666666">4</span>], ext[<span style="color:#666666">5</span>]<span style="color:#666666">+1</span>)</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:Monaco">inputPd <span style="color:#666666">=</span> inputs[<span style="color:#666666">0</span>]<span style="color:#666666">.</span>GetPointData()</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:Monaco">outputCd <span style="color:#666666">=</span> output<span style="color:#666666">.</span>GetCellData()</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:Monaco">outputCd<span style="color:#666666">.</span>SetScalars(inputPd<span style="color:#666666">.</span>GetScalars())</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></pre>
<pre style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:Monaco"> </span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></pre>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB">This assumes that the NetCDF reader is producing a vtkImageData (you can check under the Information panel) which would report the Type: of the data set as "Image (Uniform Rectilinear Grid).<o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"> <o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB">HTH,<o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB">Cory<o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"> <o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB">On Wed, May 2, 2018 at 10:17 AM Engelen, J. van (Joeri) <</span></span><a href="mailto:j.vanengelen1@uu.nl" target="_blank"><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB">j.vanengelen1@uu.nl</span></span><span style="mso-bookmark:_MailOriginalBody"></span></a><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB">>
wrote:<o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">Hi,</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:.5in">
<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif"> </span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">I was wondering whether it is possible to read NetCDF files as CellData.</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:.5in">
<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif"> </span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:.5in">
<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">I have categorial data on Cartesian coordinates that I want to visualize. To be more specific, the data represents lithologies of the subsurface. So 1 = sand,
3 = clay, 5 = rock.</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">The problem is that my file is automatically interpreted as PointData. To render this PointData, Paraview than consequently interpolates to achieve cell values.
</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">With most variables that is not such a problem, but here it is. If I have sand (1) overlying rock (5), Paraview shows me clay (3).
</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif"> </span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">Also, the information available to me was ambiguous,</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:.5in">
<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">-this source says it is probably not possible:</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"></span><a href="https://public.kitware.com/pipermail/paraview/2017-September/040984.html" target="_blank"><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">https://public.kitware.com/pipermail/paraview/2017-September/040984.html</span></span><span style="mso-bookmark:_MailOriginalBody"></span></a><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:.5in">
<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">-this states it is possible return Cell Data information:</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"></span><a href="https://www.paraview.org/ParaView/Doc/Nightly/www/py-doc/paraview.simple.NetCDFReader.html" target="_blank"><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">https://www.paraview.org/ParaView/Doc/Nightly/www/py-doc/paraview.simple.NetCDFReader.html</span></span><span style="mso-bookmark:_MailOriginalBody"></span></a><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif"> </span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">I tried converting my data from NetCDF to a .vtr file in Python, but this resulted in more problems than solutions. (Just gave me very glitched rendering).</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:.5in">
<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif"> </span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:.5in">
<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">So I have two questions:</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:.5in">
<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">-Is this possible?</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;margin-left:.5in">
<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">-Are there any workarounds you can think of to get my data as CellData in Paraview?</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif"> </span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">I’m using Paraview v5.4.1 on Windows 7.
</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif"> </span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB" style="font-family:"Arial",sans-serif">Kind regards,<br>
Joeri</span></span><span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"><o:p></o:p></span></span></p>
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<o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB"> <o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB">-- <o:p></o:p></span></span></p>
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<span style="mso-bookmark:_MailOriginalBody"><span lang="EN-GB">Cory Quammen<br>
Staff R&D Engineer<br>
Kitware, Inc.<o:p></o:p></span></span></p>
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<o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody"><o:p> </o:p></span></p>
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<o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:.5in"><span style="mso-bookmark:_MailOriginalBody">Cory Quammen<br>
Staff R&D Engineer<br>
Kitware, Inc.<o:p></o:p></span></p>
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