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</o:shapelayout></xml><![endif]--></head><body lang=EN-US link=blue vlink=purple><div class=WordSection1><p class=MsoNormal>Typically an .xdmf file is an _<i>additional</i>_ file to the .h5 file and it does not replace the .h5 file. Does the python command generate a .xdmf or .xmf file after it completes?<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><div><p class=MsoNormal><span style='color:black'>--<o:p></o:p></span></p><p class=MsoNormal><span style='color:black'>Michael Jackson | Owner, President<o:p></o:p></span></p><p class=MsoNormal><span style='color:black'> BlueQuartz Software<o:p></o:p></span></p><p class=MsoNormal><span style='color:black'>[e] <a href="mailto:mike.jackson@bluequartz.net"><span style='color:purple'>mike.jackson@bluequartz.net</span></a><o:p></o:p></span></p></div><p class=MsoNormal><span style='color:black'>[w] www.bluequartz.net</span><o:p></o:p></p><div style='border:none;border-top:solid #B5C4DF 1.0pt;padding:3.0pt 0in 0in 0in'><p class=MsoNormal style='margin-left:.5in'><b><span style='font-size:12.0pt;color:black'>From: </span></b><span style='font-size:12.0pt;color:black'>ParaView <paraview-bounces@public.kitware.com> on behalf of Phuripan Jangthongsiri <bung_m105@hotmail.com><br><b>Date: </b>Friday, April 27, 2018 at 7:49 AM<br><b>To: </b>Mathieu Westphal <mathieu.westphal@kitware.com><br><b>Cc: </b>"paraview@public.kitware.com" <paraview@public.kitware.com><br><b>Subject: </b>Re: [Paraview] converting .h5 file<o:p></o:p></span></p></div><div><p class=MsoNormal style='margin-left:.5in'><o:p> </o:p></p></div><div><p class=MsoNormal style='margin-left:.5in;background:white'><a name="_MailOriginalBody"><span style='font-size:12.0pt;color:black'>Hi,<o:p></o:p></span></a></p></div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'><o:p> </o:p></span></span></p></div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'>It's called Salvus. It's a software for Seismology. They have a command that: ! python ./petsc_gen_xdmf.py name_of_your_file.h5<o:p></o:p></span></span></p></div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'><o:p> </o:p></span></span></p></div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'>and it should convert .h5 file to .xdmf but it doesn't work. I was wondering if there are any converters out there or any codes that I could run on python?<o:p></o:p></span></span></p></div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'><o:p> </o:p></span></span></p></div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'>Cheers,<o:p></o:p></span></span></p></div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'>Phuripan<o:p></o:p></span></span></p></div><div class=MsoNormal align=center style='margin-left:.5in;text-align:center'><span style='mso-bookmark:_MailOriginalBody'><hr size=0 width="100%" align=center></span></div><div id=divRplyFwdMsg><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'><b><span style='color:black'>From:</span></b></span><span style='mso-bookmark:_MailOriginalBody'><span style='color:black'> Mathieu Westphal <mathieu.westphal@kitware.com><br><b>Sent:</b> Friday, April 27, 2018 11:37 AM<br><b>To:</b> Phuripan Jangthongsiri<br><b>Cc:</b> paraview@public.kitware.com<br><b>Subject:</b> Re: [Paraview] converting .h5 file</span></span><span style='mso-bookmark:_MailOriginalBody'> <o:p></o:p></span></p><div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'> <o:p></o:p></span></p></div></div><div><div><div><div><p class=MsoNormal style='mso-margin-top-alt:0in;margin-right:0in;margin-bottom:12.0pt;margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'>Hi Phuripan,<o:p></o:p></span></p></div><p class=MsoNormal style='mso-margin-top-alt:0in;margin-right:0in;margin-bottom:12.0pt;margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'>Which software are you using to produce your .h5 files ?<o:p></o:p></span></p></div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'>Best,<o:p></o:p></span></p></div><div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'><br clear=all><o:p></o:p></span></p><div><div><div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'>Mathieu Westphal<o:p></o:p></span></p></div></div></div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'><o:p> </o:p></span></p><div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'>On Fri, Apr 27, 2018 at 12:09 PM, Phuripan Jangthongsiri <</span><a href="mailto:bung_m105@hotmail.com" target="_blank"><span style='mso-bookmark:_MailOriginalBody'>bung_m105@hotmail.com</span><span style='mso-bookmark:_MailOriginalBody'></span></a><span style='mso-bookmark:_MailOriginalBody'>> wrote:<o:p></o:p></span></p><blockquote style='border:none;border-left:solid #CCCCCC 1.0pt;padding:0in 0in 0in 6.0pt;margin-left:4.8pt;margin-right:0in'><div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'>Hi there!<o:p></o:p></span></span></p></div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'><o:p> </o:p></span></span></p></div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'>Thanks for your answers. I've been trying to find a way to convert .h5 file to xdmf file. Do you know the easiest way to do that?<o:p></o:p></span></span></p></div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'><o:p> </o:p></span></span></p></div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'>Sincerely,<o:p></o:p></span></span></p></div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'>Phuripan Jangthongsiri<o:p></o:p></span></span></p></div><div class=MsoNormal align=center style='margin-left:.5in;text-align:center'><span style='mso-bookmark:_MailOriginalBody'><hr size=0 width="100%" align=center></span></div><div id="x_m_2594076658030557938divRplyFwdMsg"><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'><b><span style='color:black'>From:</span></b></span><span style='mso-bookmark:_MailOriginalBody'><span style='color:black'> Mathieu Westphal <</span></span><a href="mailto:mathieu.westphal@kitware.com" target="_blank"><span style='mso-bookmark:_MailOriginalBody'>mathieu.westphal@kitware.com</span><span style='mso-bookmark:_MailOriginalBody'></span></a><span style='mso-bookmark:_MailOriginalBody'><span style='color:black'>><br><b>Sent:</b> Friday, April 27, 2018 9:09 AM<br><b>To:</b> Phuripan Jangthongsiri<br><b>Cc:</b> </span></span><a href="mailto:paraview@public.kitware.com" target="_blank"><span style='mso-bookmark:_MailOriginalBody'>paraview@public.kitware.com</span><span style='mso-bookmark:_MailOriginalBody'></span></a><span style='mso-bookmark:_MailOriginalBody'><span style='color:black'><br><b>Subject:</b> Re: [Paraview] converting .h5 file</span></span><span style='mso-bookmark:_MailOriginalBody'> <o:p></o:p></span></p><div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'> <o:p></o:p></span></p></div></div><div><div><div><div><div><div><p class=MsoNormal style='mso-margin-top-alt:0in;margin-right:0in;margin-bottom:12.0pt;margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'>Dear Phuripan,<o:p></o:p></span></p></div><p class=MsoNormal style='mso-margin-top-alt:0in;margin-right:0in;margin-bottom:12.0pt;margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'>ParaView support some hdf5 based format already, so you may want to try that first, i've included a list a .h5 based format supported by ParaView natively.<br>TRUCHAS dataset<br>PDAL Files<br>Chombo Files<br>GTC Files<br>UNIC Files<br>VizSchema Files<br>H5Nimrod Files<br>Multilevel 3D Plasma Files<br>PFLOTRAN Files<br>Pixie Files<br>Tetrad Files<o:p></o:p></span></p></div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'>Please note that we also support Xdmf, H5Part and Enzo HDF5 format wich are using hdf5 as well.<o:p></o:p></span></p><div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'><o:p> </o:p></span></p></div><div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'>Best regards,<o:p></o:p></span></p></div><div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'><br clear=all><o:p></o:p></span></p><div><div><div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'>Mathieu Westphal<o:p></o:p></span></p></div></div></div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'><o:p> </o:p></span></p><div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'>On Thu, Apr 26, 2018 at 5:02 PM, Phuripan Jangthongsiri <</span><a href="mailto:Bung_m105@hotmail.com" target="_blank"><span style='mso-bookmark:_MailOriginalBody'>Bung_m105@hotmail.com</span><span style='mso-bookmark:_MailOriginalBody'></span></a><span style='mso-bookmark:_MailOriginalBody'>> wrote:<o:p></o:p></span></p><blockquote style='border:none;border-left:solid #CCCCCC 1.0pt;padding:0in 0in 0in 6.0pt;margin-left:4.8pt;margin-right:0in'><div><div><p class=MsoNormal style='margin-left:.5in;background:white'><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:11.5pt;color:#333333'>Dear whom it may concern,</span></span><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:11.5pt;color:black'><br><br></span></span><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:11.5pt;color:#333333'>I'm having .h5 files for my simulations. I'm wondering if there are easy ways to convert those .h5 files to something that Paraview could read and what are types of files that are allowed on Paraview.</span></span><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:11.5pt;color:black'><br><br></span></span><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:11.5pt;color:#333333'>Sincerely,</span></span><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:11.5pt;color:black'><br></span></span><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:11.5pt;color:#333333'>Phuripan</span></span><span style='mso-bookmark:_MailOriginalBody'><span style='font-size:12.0pt;color:black'><o:p></o:p></span></span></p></div></div><p class=MsoNormal style='mso-margin-top-alt:0in;margin-right:0in;margin-bottom:12.0pt;margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'><br>_______________________________________________<br>Powered by </span><a href="http://www.kitware.com" target="_blank"><span style='mso-bookmark:_MailOriginalBody'>www.kitware.com</span><span style='mso-bookmark:_MailOriginalBody'></span></a><span style='mso-bookmark:_MailOriginalBody'><br><br>Visit other Kitware open-source projects at </span><a href="http://www.kitware.com/opensource/opensource.html" target="_blank"><span style='mso-bookmark:_MailOriginalBody'>http://www.kitware.com/opensource/opensource.html</span><span style='mso-bookmark:_MailOriginalBody'></span></a><span style='mso-bookmark:_MailOriginalBody'><br><br>Please keep messages on-topic and check the ParaView Wiki at: </span><a href="http://paraview.org/Wiki/ParaView" target="_blank"><span style='mso-bookmark:_MailOriginalBody'>http://paraview.org/Wiki/ParaView</span><span style='mso-bookmark:_MailOriginalBody'></span></a><span style='mso-bookmark:_MailOriginalBody'><br><br>Search the list archives at: </span><a href="http://markmail.org/search/?q=ParaView" target="_blank"><span style='mso-bookmark:_MailOriginalBody'>http://markmail.org/search/?q=ParaView</span><span style='mso-bookmark:_MailOriginalBody'></span></a><span style='mso-bookmark:_MailOriginalBody'><br><br>Follow this link to subscribe/unsubscribe:<br></span><a href="https://public.kitware.com/mailman/listinfo/paraview" target="_blank"><span style='mso-bookmark:_MailOriginalBody'>https://public.kitware.com/mailman/listinfo/paraview</span><span style='mso-bookmark:_MailOriginalBody'></span></a><span style='mso-bookmark:_MailOriginalBody'><o:p></o:p></span></p></blockquote></div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'><o:p> </o:p></span></p></div></div></div></div></div></div></blockquote></div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'><o:p> </o:p></span></p></div></div><p class=MsoNormal style='margin-left:.5in'><span style='mso-bookmark:_MailOriginalBody'>_______________________________________________ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Search the list archives at: http://markmail.org/search/?q=ParaView Follow this link to subscribe/unsubscribe: https://public.kitware.com/mailman/listinfo/paraview </span><o:p></o:p></p></div></body></html>