[Paraview] Parallel read of ExodusII side sets not a union of the parts

Jozsef Bakosi jbakosi at lanl.gov
Mon Aug 6 13:25:52 EDT 2018


Hi folks,

When I use the ExodusII reader to read a data set (mesh + side sets +
field data) from partitioned files, I don't get a correct union of the
side sets. Perhaps I'm not using this correctly and someone can help me
out.

Example: An ExodusII mesh file has 6 side sets each with its own 16
triangle faces (relevant output obtained using ncdump):

 num_side_ss1 = 16 ;
 num_side_ss2 = 16 ;
 num_side_ss3 = 16 ;
 num_side_ss4 = 16 ;
 num_side_ss5 = 16 ;
 num_side_ss6 = 16 ;
 ss_prop1 = 1, 2, 3, 4, 5, 6 ;

If this is saved in two ExodusII files (after running on 2 PEs and
having the mesh partitioned into two parts), out.0 and out.1 may contain
partial side set information:

out.0:
 num_side_ss1 = 16 ;
 num_side_ss2 = 7 ;
 num_side_ss3 = 7 ;
 num_side_ss4 = 7 ;
 num_side_ss5 = 8 ;
 ss_prop1 = 2, 3, 4, 5, 6 ;

out.1:
 num_side_ss1 = 16 ;
 num_side_ss2 = 9 ;
 num_side_ss3 = 9 ;
 num_side_ss4 = 9 ;
 num_side_ss5 = 8 ;
 ss_prop1 = 1, 3, 4, 5, 6 ;

I.e., side set 1 is only in out.1, side set 2 is only in out.0, while
the rest of the side sets have a partial list of faces in each file.
Note that the number of faces in each correctly sum to 16 on each side
set, thus the union is what I'd like to see in Paraview. However,
Paraview's Exodus reader fails to correctly load the union of all side
sets when stitching the two files together, and only lists side sets
1,3,4,5,6. (In which all faces show up but some are assigned to
incorrect side set ids, e.g., faces that were in 1 and 2 in the original
mesh now are all in set 1.)

For reproduction, I attach the input mesh (unitcube_135ss.exo) and the
mesh partitioned into to two files (out.0 and out.1).

I tried this with Paraview 5.4.1 and 5.5.2 and both behaves the same.

Thanks for the help in advance,
Jozsef
-------------- next part --------------
A non-text attachment was scrubbed...
Name: unitcube_135ss.exo
Type: application/octet-stream
Size: 43382 bytes
Desc: not available
URL: <https://public.kitware.com/pipermail/paraview/attachments/20180806/915656c3/attachment.obj>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: out.0
Type: application/octet-stream
Size: 23172 bytes
Desc: not available
URL: <https://public.kitware.com/pipermail/paraview/attachments/20180806/915656c3/attachment-0001.obj>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: out.1
Type: application/octet-stream
Size: 22684 bytes
Desc: not available
URL: <https://public.kitware.com/pipermail/paraview/attachments/20180806/915656c3/attachment-0002.obj>


More information about the ParaView mailing list