[Paraview] Can I use paraview to visualize molecule dataset?

Utkarsh Ayachit utkarsh.ayachit at kitware.com
Wed Jul 26 08:57:13 EDT 2017


And here's a related blog post:
https://blog.kitware.com/new-features-paraview-chemistry-pettt/

Utkarsh

On Wed, Jul 26, 2017 at 7:25 AM, Cory Quammen <cory.quammen at kitware.com>
wrote:

> Zhang,
>
> Yes, you can visualize molecules in ball-and-stick representation in
> ParaView (see attached). This representation is used whenever you load
> a vtkMolecule data type. If you have a PDB file, for example, it will
> be read in as a vtkMolecule data type and displayed with
> ball-and-stick representation by default. You can also change the
> Molecule "Render Mode" property to "Space Filling" or "Liquorice"
> representation.
>
> HTH,
> Cory
>
>
>
> On Wed, Jul 26, 2017 at 3:57 AM, 张驭洲 <yzhzhang at ipe.ac.cn> wrote:
> >
> >
> > Hello,
> >
> >       I want to know if I can use paraview to visualize molecule dataset,
> > i.e., using ball-and-stick model to represent molecules? Currently I can
> > only using point gaussian to represent the "ball", but I don't know how
> to
> > visualize the "stick". I know another visualization tool VMD is designed
> to
> > do works of this kind, but I've not found similar founctions in ParaView.
> >
> > -Zhang
> >
> >
> >
> >
> >
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>
>
> --
> Cory Quammen
> Staff R&D Engineer
> Kitware, Inc.
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/
> opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
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