From apeczak at ara.co.uk  Mon Feb  1 06:31:50 2016
From: apeczak at ara.co.uk (Andrzej Peczak)
Date: Mon, 1 Feb 2016 11:31:50 +0000
Subject: [Paraview] DoubleVectorProperty widget
In-Reply-To: <CAB5Fpx78jhN-UfrKNNR8MphaGaWYoA=akjLi_JA34wnpjWbz7Q@mail.gmail.com>
References: <5DF928D22AC3AC4B964903E98F2E54515A3F706B@sooty3.win.ara> 
 <CAB5Fpx78jhN-UfrKNNR8MphaGaWYoA=akjLi_JA34wnpjWbz7Q@mail.gmail.com>
Message-ID: <5DF928D22AC3AC4B964903E98F2E54515A3F7193@sooty3.win.ara>

Thanks Cory, I did not realise that I can do it this way. I have another question regarding representation of properties.
Is there a way to substitute a default property widget with my own widget if I was to create one, say in the plugin xml configuration file ?

Andrzej


From: Cory Quammen [mailto:cory.quammen at kitware.com]
Sent: 29 January 2016 20:03
To: Andrzej Peczak
Cc: paraview at paraview.org
Subject: Re: [Paraview] DoubleVectorProperty widget

Andrzej,

Once you have the property, can't you call

vtkSMDoubleVectorProperty::SetNumberOfElements(0);

?

Thanks,
Cory

On Fri, Jan 29, 2016 at 11:35 AM, Andrzej Peczak <apeczak at ara.co.uk<mailto:apeczak at ara.co.uk>> wrote:
Hi

I want to modify a state of the DoubleVectorProperty object or its widget representation. I know that I can modify its content through vtkSMDoubleVectorProperty object retrieved with pqActiveObjects::instance().activeSource()->getSourceProxy()->GetProperty(...) method but I cannot find a method which would allow me to clear the entire content of it. I figured out that an alternative way to do that would be to retrieve the widget representation of that property which would be pqScalarValueListPropertyWidget and then call setScalars() but I do not know where I can get the object from.

Andrzej


**********************************************************************
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If you are not the intended recipient please delete it and notify us immediately by e-mailing the sender.
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Manton Lane, Bedford MK41 7PF England VAT No GB 196351245

**********************************************************************
_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>

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--
Cory Quammen
R&D Engineer
Kitware, Inc.

**********************************************************************
Please consider the environment. Only print this email if absolutely necessary.

This email contains information that is private and confidential and is intended only for the addressee.
If you are not the intended recipient please delete it and notify us immediately by e-mailing the sender.
Note: All email sent to or from this address may be accessed by someone other than the recipient, for
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Manton Lane, Bedford MK41 7PF England VAT No GB 196351245

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From cory.quammen at kitware.com  Mon Feb  1 09:38:39 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Mon, 1 Feb 2016 09:38:39 -0500
Subject: [Paraview] DoubleVectorProperty widget
In-Reply-To: <5DF928D22AC3AC4B964903E98F2E54515A3F7193@sooty3.win.ara>
References: <5DF928D22AC3AC4B964903E98F2E54515A3F706B@sooty3.win.ara>
 <CAB5Fpx78jhN-UfrKNNR8MphaGaWYoA=akjLi_JA34wnpjWbz7Q@mail.gmail.com>
 <5DF928D22AC3AC4B964903E98F2E54515A3F7193@sooty3.win.ara>
Message-ID: <CAB5Fpx6D1PjtLmdnHaNoC-GZLOr_kNxw-+1viPEzSARnuVKzzA@mail.gmail.com>

Sure. Details on how to do that are available here:

http://www.paraview.org/Wiki/ParaView/Plugin_HowTo#Adding_Customizations_for_Properties_Panel

- Cory

On Mon, Feb 1, 2016 at 6:31 AM, Andrzej Peczak <apeczak at ara.co.uk> wrote:

> Thanks Cory, I did not realise that I can do it this way. I have another
> question regarding representation of properties.
>
> Is there a way to substitute a default property widget with my own widget
> if I was to create one, say in the plugin xml configuration file ?
>
>
>
> Andrzej
>
>
>
>
>
> *From:* Cory Quammen [mailto:cory.quammen at kitware.com]
> *Sent:* 29 January 2016 20:03
> *To:* Andrzej Peczak
> *Cc:* paraview at paraview.org
> *Subject:* Re: [Paraview] DoubleVectorProperty widget
>
>
>
> Andrzej,
>
>
>
> Once you have the property, can't you call
>
>
>
> vtkSMDoubleVectorProperty::SetNumberOfElements(0);
>
>
>
> ?
>
>
>
> Thanks,
>
> Cory
>
>
>
> On Fri, Jan 29, 2016 at 11:35 AM, Andrzej Peczak <apeczak at ara.co.uk>
> wrote:
>
> Hi
>
> I want to modify a state of the DoubleVectorProperty object or its widget
> representation. I know that I can modify its content through
> vtkSMDoubleVectorProperty object retrieved with
> pqActiveObjects::instance().activeSource()->getSourceProxy()->GetProperty(...)
> method but I cannot find a method which would allow me to clear the entire
> content of it. I figured out that an alternative way to do that would be to
> retrieve the widget representation of that property which would be
> pqScalarValueListPropertyWidget and then call setScalars() but I do not
> know where I can get the object from.
>
> Andrzej
>
>
> **********************************************************************
> Please consider the environment. Only print this email if absolutely
> necessary.
>
> This email contains information that is private and confidential and is
> intended only for the addressee.
> If you are not the intended recipient please delete it and notify us
> immediately by e-mailing the sender.
> Note: All email sent to or from this address may be accessed by someone
> other than the recipient, for
> system management and security reasons.
> Aircraft Research Association Ltd.  Registered in England, Registration No
> 503668 Registered Office:
> Manton Lane, Bedford MK41 7PF England VAT No GB 196351245
>
> **********************************************************************
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
>
>
>
> --
>
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
>
> **********************************************************************
>
> Please consider the environment. Only print this email if absolutely
> necessary.
>
> This email contains information that is private and confidential and is
> intended only for the addressee.
> If you are not the intended recipient please delete it and notify us
> immediately by e-mailing the sender.
> Note: All email sent to or from this address may be accessed by someone
> other than the recipient, for
> system management and security reasons.
> Aircraft Research Association Ltd.  Registered in England, Registration No
> 503668 Registered Office:
> Manton Lane, Bedford MK41 7PF England VAT No GB 196351245
>
> **********************************************************************
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.
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From utkarsh.ayachit at kitware.com  Mon Feb  1 10:35:04 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Mon, 1 Feb 2016 10:35:04 -0500
Subject: [Paraview] Changing values of property panel
In-Reply-To: <5DF928D22AC3AC4B964903E98F2E54515A3F7034@sooty3.win.ara>
References: <5DF928D22AC3AC4B964903E98F2E54515A3F4DDD@sooty3.win.ara>
 <CAKkFzud2BzzeQMH+6SzY3RvK+8FK69mMZbOW3F0OUnX9smKHDQ@mail.gmail.com>
 <5DF928D22AC3AC4B964903E98F2E54515A3F6F0E@sooty3.win.ara>
 <CAKkFzuepG0HOy-sqyisNCUO9ELHtHgPFcw=ZG=byu-3O6qicgw@mail.gmail.com>
 <5DF928D22AC3AC4B964903E98F2E54515A3F7034@sooty3.win.ara>
Message-ID: <CADHSJjCiL=g-T+mwzYnLjDynSpB-LGuA3P2ASDKH=Vc4JFUbKA@mail.gmail.com>

> Now I am trying to wrap up my algorithm into a filter class and thought that
> either RequestData() or RequestUpdateExtent() may be a good place to do it.
> Unfortunately the pipeline representation object is not available when I
> create the filter for the first time and press Apply. I also figured out
> that once the filter has  been created, modified and the Apply button was
> pressed again the filter already knows that the representation is there. Is
> there a way around it to get this to work all the time or do I have to
> register a button which would need to be used after the filter has been
> created in the pipeline browser in order to update its properties for the
> first time ?

For reasons I won't go into details here, a filter is not the right
place for such actions that put together representation properties. A
filter does only 1 thing: take input data and process it to produce an
output data. Since that's not what you're doing here, the code doesn't
fit inside a filter.

Utkarsh

From mersadkhan at yahoo.com  Mon Feb  1 10:40:25 2016
From: mersadkhan at yahoo.com (mersad mostaghimi)
Date: Mon, 1 Feb 2016 15:40:25 +0000 (UTC)
Subject: [Paraview] compiling mdf error
References: <1710680011.3227912.1454341225448.JavaMail.yahoo.ref@mail.yahoo.com>
Message-ID: <1710680011.3227912.1454341225448.JavaMail.yahoo@mail.yahoo.com>

Dear usersI finished the cmake configuration without any error in version 5 of paraview. but in make i have an error of md5 

CMake Error at /home/mersadkhan/softs/installations/ParaView-v5.0.0-source/CMake/ExternalData.cmake:749 (message):
? Object MD5=605faba2c1abb703e0584dd43ad5faf5 not found at:

??? http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=605faba2c1abb703e0584dd43ad5faf5&algorithm=MD5 ("Unsupported protocol")
??? http://www.paraview.org/files/ExternalData/MD5/605faba2c1abb703e0584dd43ad5faf5 ("HTTP response code said error")
Call Stack (most recent call first):
? /home/mersadkhan/softs/installations/ParaView-v5.0.0-source/CMake/ExternalData.cmake:771 (_ExternalData_download_object)
? 


make[2]: *** [ExternalData/Testing/Data/Baseline/FindDataDialog12.png.md5-stamp] Error 1
make[1]: *** [CMakeFiles/ParaViewData.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....

i checked this web page and i found out there is no access to it. it is fake! 
what should i do?
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From cory.quammen at kitware.com  Mon Feb  1 10:43:12 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Mon, 1 Feb 2016 10:43:12 -0500
Subject: [Paraview] compiling mdf error
In-Reply-To: <1710680011.3227912.1454341225448.JavaMail.yahoo@mail.yahoo.com>
References: <1710680011.3227912.1454341225448.JavaMail.yahoo.ref@mail.yahoo.com>
 <1710680011.3227912.1454341225448.JavaMail.yahoo@mail.yahoo.com>
Message-ID: <CAB5Fpx5eHa=t=meCZ12Nkfrz7hSoJAmXf0tSUwaNaEZfqrVVCg@mail.gmail.com>

Please try to compile again. A change was made this morning that should
resolve this error.

Thanks,
Cory

On Mon, Feb 1, 2016 at 10:40 AM, mersad mostaghimi via ParaView <
paraview at paraview.org> wrote:

> Dear users
> I finished the cmake configuration without any error in version 5 of
> paraview. but in make i have an error of md5
>
> CMake Error at
> /home/mersadkhan/softs/installations/ParaView-v5.0.0-source/CMake/ExternalData.cmake:749
> (message):
>   Object MD5=605faba2c1abb703e0584dd43ad5faf5 not found at:
>
>
> http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=605faba2c1abb703e0584dd43ad5faf5&algorithm=MD5
> ("Unsupported protocol")
>
> http://www.paraview.org/files/ExternalData/MD5/605faba2c1abb703e0584dd43ad5faf5
> ("HTTP response code said error")
> Call Stack (most recent call first):
>
> /home/mersadkhan/softs/installations/ParaView-v5.0.0-source/CMake/ExternalData.cmake:771
> (_ExternalData_download_object)
>
>
>
> make[2]: ***
> [ExternalData/Testing/Data/Baseline/FindDataDialog12.png.md5-stamp] Error 1
> make[1]: *** [CMakeFiles/ParaViewData.dir/all] Error 2
> make[1]: *** Waiting for unfinished jobs....
>
>
> i checked this web page and i found out there is no access to it. it is
> fake!
> what should i do?
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>


-- 
Cory Quammen
R&D Engineer
Kitware, Inc.
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From cory.quammen at kitware.com  Mon Feb  1 10:46:55 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Mon, 1 Feb 2016 10:46:55 -0500
Subject: [Paraview] compiling mdf error
In-Reply-To: <CAB5Fpx5eHa=t=meCZ12Nkfrz7hSoJAmXf0tSUwaNaEZfqrVVCg@mail.gmail.com>
References: <1710680011.3227912.1454341225448.JavaMail.yahoo.ref@mail.yahoo.com>
 <1710680011.3227912.1454341225448.JavaMail.yahoo@mail.yahoo.com>
 <CAB5Fpx5eHa=t=meCZ12Nkfrz7hSoJAmXf0tSUwaNaEZfqrVVCg@mail.gmail.com>
Message-ID: <CAB5Fpx4kev4oODqn2Kfk7=zx15VPZb-Mx7YEJ-=pM4i-6AyYuQ@mail.gmail.com>

In addition, you may want to build or obtain CMake with SSL support. This
will enable downloading of data files over https and should avoid this kind
of problem in the future.

Cory

On Mon, Feb 1, 2016 at 10:43 AM, Cory Quammen <cory.quammen at kitware.com>
wrote:

> Please try to compile again. A change was made this morning that should
> resolve this error.
>
> Thanks,
> Cory
>
> On Mon, Feb 1, 2016 at 10:40 AM, mersad mostaghimi via ParaView <
> paraview at paraview.org> wrote:
>
>> Dear users
>> I finished the cmake configuration without any error in version 5 of
>> paraview. but in make i have an error of md5
>>
>> CMake Error at
>> /home/mersadkhan/softs/installations/ParaView-v5.0.0-source/CMake/ExternalData.cmake:749
>> (message):
>>   Object MD5=605faba2c1abb703e0584dd43ad5faf5 not found at:
>>
>>
>> http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=605faba2c1abb703e0584dd43ad5faf5&algorithm=MD5
>> ("Unsupported protocol")
>>
>> http://www.paraview.org/files/ExternalData/MD5/605faba2c1abb703e0584dd43ad5faf5
>> ("HTTP response code said error")
>> Call Stack (most recent call first):
>>
>> /home/mersadkhan/softs/installations/ParaView-v5.0.0-source/CMake/ExternalData.cmake:771
>> (_ExternalData_download_object)
>>
>>
>>
>> make[2]: ***
>> [ExternalData/Testing/Data/Baseline/FindDataDialog12.png.md5-stamp] Error 1
>> make[1]: *** [CMakeFiles/ParaViewData.dir/all] Error 2
>> make[1]: *** Waiting for unfinished jobs....
>>
>>
>> i checked this web page and i found out there is no access to it. it is
>> fake!
>> what should i do?
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.
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From wascott at sandia.gov  Mon Feb  1 15:17:58 2016
From: wascott at sandia.gov (Scott, W Alan)
Date: Mon, 1 Feb 2016 20:17:58 +0000
Subject: [Paraview] Erode and Dilate filters
Message-ID: <7e15a17eaf114976af395ac1380b5f6c@ES01AMSNLNT.srn.sandia.gov>

Does anyone know the python (programmable filter, I suppose) needed to expose the Erode and Dilate filters?

Thanks,

Alan

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From mersadkhan at yahoo.com  Tue Feb  2 05:06:25 2016
From: mersadkhan at yahoo.com (mersad mostaghimi)
Date: Tue, 2 Feb 2016 10:06:25 +0000 (UTC)
Subject: [Paraview] compiling mdf error
In-Reply-To: <CAB5Fpx4kev4oODqn2Kfk7=zx15VPZb-Mx7YEJ-=pM4i-6AyYuQ@mail.gmail.com>
References: <CAB5Fpx4kev4oODqn2Kfk7=zx15VPZb-Mx7YEJ-=pM4i-6AyYuQ@mail.gmail.com>
Message-ID: <2018308886.296550.1454407585835.JavaMail.yahoo@mail.yahoo.com>

Dear Cory Quammenthe first problem is solved but there is an other problem? which is again an MD5 problem. this time is in VTK installation during installing Paraview from source files.
- Downloaded object: "/home/mersadkhan/softs/installations/ParaView-v5.0.0-source/build-dir/ExternalData/Objects/MD5/6b936be2675c919e589bfb34593fa3c1"-- Fetching "http://www.vtk.org/files/ExternalData/MD5/76d5fb83f8f34bc7fca74632d8198a08"
-- [download 12% complete]
-- [download 33% complete]
-- [download 40% complete]
-- [download 60% complete]
-- [download 67% complete]
-- [download 80% complete]
-- [download 100% complete]
-- Downloaded object: "/home/mersadkhan/softs/installations/ParaView-v5.0.0-source/build-dir/ExternalData/Objects/MD5/76d5fb83f8f34bc7fca74632d8198a08"
make[1]: *** [VTK/CMakeFiles/VTKData.dir/all] Error 2
make: *** [all] Error 2
?thanks for your response 
Best regards
 

    On Monday, February 1, 2016 7:16 PM, Cory Quammen <cory.quammen at kitware.com> wrote:
 

 In addition, you may want to build or obtain CMake with SSL support. This will enable downloading of data files over https and should avoid this kind of problem in the future.
Cory
On Mon, Feb 1, 2016 at 10:43 AM, Cory Quammen <cory.quammen at kitware.com> wrote:

Please try to compile again. A change was made this morning that should resolve this error.
Thanks,Cory
On Mon, Feb 1, 2016 at 10:40 AM, mersad mostaghimi via ParaView <paraview at paraview.org> wrote:

Dear usersI finished the cmake configuration without any error in version 5 of paraview. but in make i have an error of md5 

CMake Error at /home/mersadkhan/softs/installations/ParaView-v5.0.0-source/CMake/ExternalData.cmake:749 (message):
? Object MD5=605faba2c1abb703e0584dd43ad5faf5 not found at:

??? http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=605faba2c1abb703e0584dd43ad5faf5&algorithm=MD5 ("Unsupported protocol")
??? http://www.paraview.org/files/ExternalData/MD5/605faba2c1abb703e0584dd43ad5faf5 ("HTTP response code said error")
Call Stack (most recent call first):
? /home/mersadkhan/softs/installations/ParaView-v5.0.0-source/CMake/ExternalData.cmake:771 (_ExternalData_download_object)
? 


make[2]: *** [ExternalData/Testing/Data/Baseline/FindDataDialog12.png.md5-stamp] Error 1
make[1]: *** [CMakeFiles/ParaViewData.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....

i checked this web page and i found out there is no access to it. it is fake! 
what should i do?

_______________________________________________
Powered by www.kitware.com

Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html

Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView

Search the list archives at: http://markmail.org/search/?q=ParaView

Follow this link to subscribe/unsubscribe:
http://public.kitware.com/mailman/listinfo/paraview





-- 
Cory Quammen
R&D Engineer
Kitware, Inc.



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.

  
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From grothausmann.roman at mh-hannover.de  Tue Feb  2 05:10:28 2016
From: grothausmann.roman at mh-hannover.de (Grothausmann, Roman Dr.)
Date: Tue, 02 Feb 2016 11:10:28 +0100
Subject: [Paraview] Paraview Programmable Source 3D Text
In-Reply-To: <593AFCE559F11049B8F268BE84170A0DC11DA4@EXCHMBX03.fed.cclrc.ac.uk>
References: <593AFCE559F11049B8F268BE84170A0DC11DA4@EXCHMBX03.fed.cclrc.ac.uk>
Message-ID: <56B08094.9000607@mh-hannover.de>

Hi Anton,


I just stumbled over Your post, which I had not noticed till now. Sorry, for that.
I got a plugin working that draws 3D labels:
https://github.com/romangrothausmann/TextGlyphs3D_PVp

Tries (WIP) to make the labels face the cam are in:
https://github.com/romangrothausmann/TextGlyphs3D_PVp/tree/follow_cam

HTH, let me know if You have any improvements.
Best,
Roman

On 10/02/15 14:46, anton.piccardo-selg at stfc.ac.uk wrote:
> Hi Roman,
>
> Did you succeed to implement  a 3D Text annotation in the data set? I am
> currently also looking into adding this to our ParaView customization but I
> am a bit at a loss how this can be achieved programmatically in ParaView. If
> you have any hints or ideas how to tackle this, I would be very grateful to
> know.
>
> Many thanks and best regards,
>
> Anton
>

-- 
Dr. Roman Grothausmann

Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis

Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover

Tel. +49 511 532-2900

From mersadkhan at yahoo.com  Tue Feb  2 05:17:03 2016
From: mersadkhan at yahoo.com (mersad mostaghimi)
Date: Tue, 2 Feb 2016 10:17:03 +0000 (UTC)
Subject: [Paraview] VTK compilation problem
References: <1830977709.286983.1454408223879.JavaMail.yahoo.ref@mail.yahoo.com>
Message-ID: <1830977709.286983.1454408223879.JavaMail.yahoo@mail.yahoo.com>

when i want cmake? Paraview i face to this error:?CMake Error at /home/mersadkhan/softs/installations/cmake-3.4.2/build-dir/share/cmake-3.4/Modules/GetPrerequisites.cmake:238 (message):
?? /usr/bin/file failed: 1

?Call Stack (most recent call first):
?? VTK/CMake/FindMPI.cmake:563 (is_file_executable)
?? VTK/CMake/vtkMPI.cmake:3 (find_package)
?? VTK/Parallel/MPI/CMakeLists.txt:1 (include)
?i check that the cmake module? GetPrerequisites.cmake is in the folder and i found it .what is the problem?
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From cory.quammen at kitware.com  Tue Feb  2 09:41:08 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Tue, 2 Feb 2016 09:41:08 -0500
Subject: [Paraview] compiling mdf error
In-Reply-To: <2018308886.296550.1454407585835.JavaMail.yahoo@mail.yahoo.com>
References: <CAB5Fpx4kev4oODqn2Kfk7=zx15VPZb-Mx7YEJ-=pM4i-6AyYuQ@mail.gmail.com>
 <2018308886.296550.1454407585835.JavaMail.yahoo@mail.yahoo.com>
Message-ID: <CAB5Fpx6POP4b4n=xJQ=jNB_Rg4CnFyvj-n3-kt-6zxzJn=-L8g@mail.gmail.com>

Hi,

I don't see the error message here. Is there more you can post?

Thanks,
Cory

On Tue, Feb 2, 2016 at 5:06 AM, mersad mostaghimi <mersadkhan at yahoo.com> wrote:
> Dear Cory Quammen
> the first problem is solved but there is an other problem  which is again an
> MD5 problem. this time is in VTK installation during installing Paraview
> from source files.
>
> - Downloaded object:
> "/home/mersadkhan/softs/installations/ParaView-v5.0.0-source/build-dir/ExternalData/Objects/MD5/6b936be2675c919e589bfb34593fa3c1"
> -- Fetching
> "http://www.vtk.org/files/ExternalData/MD5/76d5fb83f8f34bc7fca74632d8198a08"
> -- [download 12% complete]
> -- [download 33% complete]
> -- [download 40% complete]
> -- [download 60% complete]
> -- [download 67% complete]
> -- [download 80% complete]
> -- [download 100% complete]
> -- Downloaded object:
> "/home/mersadkhan/softs/installations/ParaView-v5.0.0-source/build-dir/ExternalData/Objects/MD5/76d5fb83f8f34bc7fca74632d8198a08"
> make[1]: *** [VTK/CMakeFiles/VTKData.dir/all] Error 2
> make: *** [all] Error 2
>
> thanks for your response
> Best regards
>
>
> On Monday, February 1, 2016 7:16 PM, Cory Quammen <cory.quammen at kitware.com>
> wrote:
>
>
> In addition, you may want to build or obtain CMake with SSL support. This
> will enable downloading of data files over https and should avoid this kind
> of problem in the future.
>
> Cory
>
> On Mon, Feb 1, 2016 at 10:43 AM, Cory Quammen <cory.quammen at kitware.com>
> wrote:
>
> Please try to compile again. A change was made this morning that should
> resolve this error.
>
> Thanks,
> Cory
>
> On Mon, Feb 1, 2016 at 10:40 AM, mersad mostaghimi via ParaView
> <paraview at paraview.org> wrote:
>
> Dear users
> I finished the cmake configuration without any error in version 5 of
> paraview. but in make i have an error of md5
>
> CMake Error at
> /home/mersadkhan/softs/installations/ParaView-v5.0.0-source/CMake/ExternalData.cmake:749
> (message):
>   Object MD5=605faba2c1abb703e0584dd43ad5faf5 not found at:
>
>
> http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=605faba2c1abb703e0584dd43ad5faf5&algorithm=MD5
> ("Unsupported protocol")
>
> http://www.paraview.org/files/ExternalData/MD5/605faba2c1abb703e0584dd43ad5faf5
> ("HTTP response code said error")
> Call Stack (most recent call first):
>
> /home/mersadkhan/softs/installations/ParaView-v5.0.0-source/CMake/ExternalData.cmake:771
> (_ExternalData_download_object)
>
>
>
> make[2]: ***
> [ExternalData/Testing/Data/Baseline/FindDataDialog12.png.md5-stamp] Error 1
> make[1]: *** [CMakeFiles/ParaViewData.dir/all] Error 2
> make[1]: *** Waiting for unfinished jobs....
>
>
> i checked this web page and i found out there is no access to it. it is
> fake!
> what should i do?
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
>
>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
>
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.

From cory.quammen at kitware.com  Tue Feb  2 10:30:25 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Tue, 2 Feb 2016 10:30:25 -0500
Subject: [Paraview] superbuild fails on OS X [solved]
In-Reply-To: <CAB5Fpx7y6cGDHRaVSfAKWOd18CqufBpsx6u+jEe7ATfX_aKXvQ@mail.gmail.com>
References: <4EE24F9F-01ED-460B-8F54-A762B23639E1@fau.de>
 <C55AC88E-2278-4570-9A72-9B2F670A3A12@fau.de>
 <CAB5Fpx7y6cGDHRaVSfAKWOd18CqufBpsx6u+jEe7ATfX_aKXvQ@mail.gmail.com>
Message-ID: <CAB5Fpx4KBGRMe9ZBcUjO9_X1i_PXo2sDa_Mwb6g2jaJ8XpHh3A@mail.gmail.com>

Fabian,

This patch has been merged into master.

- Cory

On Mon, Jan 18, 2016 at 2:04 PM, Cory Quammen <cory.quammen at kitware.com> wrote:
>> While I understand that there is no gui without qt and that it makes sense to build paraview without gui, I suggest to make it
>> a little clearer:
>>
>> The help for ENABLE_qt* is just ?Request to build project qt*?. Maybe an ?Qt is necessary for the gui? could be added. Also the error message from make install could be enriched with a check for Qt and a message.
>
> Hi Fabian,
>
> Per your suggestion, I made a patch for improved documentation for the
> Qt external projects (4 and 5) to the ParaView superbuild. You can
> find it here:
>
> https://gitlab.kitware.com/paraview/paraview-superbuild/merge_requests/86
>
> Thanks,
> Cory
>
>>
>> /Users/fwein/code/ParaViewSuperbuild/build/qt4/src/qt4/src/gui/painting/qpaintengine_mac.cpp:345:19: error: use of undeclared identifier 'CMGetProfileByAVID'
>>     CMError err = CMGetProfileByAVID((CMDisplayIDType)displayID, &displayProfile);
>>                   ^
>> /Users/fwein/code/ParaViewSuperbuild/build/qt4/src/qt4/src/gui/painting/qpaintengine_mac.cpp:348:9: error: use of undeclared identifier 'CMCloseProfile'
>>         CMCloseProfile(displayProfile);
>>         ^
>> In file included from /Users/fwein/code/ParaViewSuperbuild/build/qt4/src/qt4/src/gui/painting/qpaintengine_mac.cpp:44:
>> In file included from ../../include/QtGui/private/qpaintengine_mac_p.h:1:
>> ../../include/QtGui/private/../../../../qt4/src/gui/painting/qpaintengine_mac_p.h:252:9: warning: private field 'mBytesPerLine' is not used [-Wunused-private-field]
>>     int mBytesPerLine;
>>         ^
>> 3 warnings and 2 errors generated.
>> make[5]: *** [.obj/release-shared/qpaintengine_mac.o] Error 1
>> make[4]: *** [release-install] Error 2
>> make[3]: *** [sub-gui-install_subtargets-ordered] Error 2
>> CMake Error at /Users/fwein/code/ParaViewSuperbuild/build/pv-qt4-build.cmake:33 (message):
>>   Failed with exit code 2
>>
>>
>>
>>> Am 18.01.2016 um 10:25 schrieb Fabian Wein <fabian.wein at fau.de>:
>>>
>>> I have the latest OS X and qt4 and qt5 installed by brew.
>>>
>>> I use the current superbuild, which covers PV 4.4 (why not 5.0?) but build fails.
>>>
>>> I use the default setting in my build and just set
>>> CMAKE_INSTALL_PREFIX and ENABLE_paraview
>>>
>>> make
>>> ?
>>> [100%] Built target paraview
>>>
>>> make install
>>> ?.
>>> [100%] Built target paraview
>>> Install the project...
>>> -- Install configuration: ""
>>> CMake Error at cmake_install.cmake:39 (file):
>>>  file INSTALL cannot find
>>>  "/Users/fwein/code/ParaViewSuperbuild/build/install/Applications/paraview.app".
>>> make: *** [install] Error 1
>>>
>>> Any suggestion or hint where to look in the log files is appreciated.
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.

From Amit.Goel at ucf.edu  Tue Feb  2 10:31:39 2016
From: Amit.Goel at ucf.edu (Amit Goel)
Date: Tue, 2 Feb 2016 15:31:39 +0000
Subject: [Paraview] ParaViewWeb issues
References: <mailman.2142.1454426856.8420.paraview@paraview.org>
Message-ID: <2B55F63C-1A66-4B0D-9A2E-D834F6E481C7@ucf.edu>

Hi

When I try to run ParaViewWeb, I get error:

pvpython /usr/lib64/paraview/site-packages/paraview/web/pv_web_visualizer.py --content /usr/share/paraview/www/ --data-dir ~/as/build/output --port 8080

Traceback (most recent call last):
 File "/usr/lib64/paraview/site-packages/paraview/web/pv_web_visualizer.py", line 85, in <module>
   from paraview.web import wamp      as pv_wamp
 File "/usr/lib64/paraview/site-packages/paraview/web/wamp.py", line 5, in <module>
   from vtk.web import wamp
 File "/usr/lib64/paraview/site-packages/vtk/web/wamp.py", line 22, in <module>
   from autobahn.twisted.wamp import ApplicationSession, RouterSession
ImportError: cannot import name RouterSession


Here is my platform info:

paraview.x86_64                    4.4.0-2.el7                         @epel    
paraview-data.noarch               4.4.0-2.el7                         @epel    
paraview-openmpi.x86_64            4.4.0-2.el7                         @epel    
python.x86_64                      2.7.5-34.el7                        @base    
python-twisted.noarch              12.1.0-2.el7.nux                    @nux-dextop
python-twisted-conch.x86_64        12.1.0-2.el7.nux                    @nux-dextop
python-twisted-core.x86_64         12.2.0-4.el7                        @base    
python-twisted-lore.x86_64         12.1.0-2.el7.nux                    @nux-dextop
python-twisted-mail.x86_64         12.1.0-2.el7.nux                    @nux-dextop
python-twisted-names.x86_64        12.1.0-2.el7.nux                    @nux-dextop
python-twisted-news.x86_64         12.1.0-2.el7.nux                    @nux-dextop
python-twisted-runner.x86_64       12.1.0-2.el7.nux                    @nux-dextop
python-twisted-web.x86_64          12.1.0-4.el7                        @base    
python-twisted-words.x86_64        12.2.0-4.el7                        @base    

CentOS Linux release 7.1.1503 (Core) 


Please share any ideas on how to resolve this situation ? - apart from building my own from code checkout.

Regards

A









From sebastien.jourdain at kitware.com  Tue Feb  2 11:35:51 2016
From: sebastien.jourdain at kitware.com (Sebastien Jourdain)
Date: Tue, 2 Feb 2016 09:35:51 -0700
Subject: [Paraview] ParaViewWeb issues
In-Reply-To: <2B55F63C-1A66-4B0D-9A2E-D834F6E481C7@ucf.edu>
References: <mailman.2142.1454426856.8420.paraview@paraview.org>
 <2B55F63C-1A66-4B0D-9A2E-D834F6E481C7@ucf.edu>
Message-ID: <CABObKxc_0FXkjPM3Fzuw_UPL4xHBEBQpxjPVvmG+XEF2yPi4Xw@mail.gmail.com>

Hi Amit,

I'm not familiar with the system package of ParaView on your OS, but
usually the Python dependencies are managed within ParaView.

So either you have a conflict between your system python library and the
one embedded inside ParaView,
or if that package is properly managed by the system, that mean you are
missing some python library.

For the later use case, I've attached what are required by ParaViewWeb to
work.

Seb

On Tue, Feb 2, 2016 at 8:31 AM, Amit Goel <Amit.Goel at ucf.edu> wrote:

> Hi
>
> When I try to run ParaViewWeb, I get error:
>
> pvpython
> /usr/lib64/paraview/site-packages/paraview/web/pv_web_visualizer.py
> --content /usr/share/paraview/www/ --data-dir ~/as/build/output --port 8080
>
> Traceback (most recent call last):
>  File
> "/usr/lib64/paraview/site-packages/paraview/web/pv_web_visualizer.py", line
> 85, in <module>
>    from paraview.web import wamp      as pv_wamp
>  File "/usr/lib64/paraview/site-packages/paraview/web/wamp.py", line 5, in
> <module>
>    from vtk.web import wamp
>  File "/usr/lib64/paraview/site-packages/vtk/web/wamp.py", line 22, in
> <module>
>    from autobahn.twisted.wamp import ApplicationSession, RouterSession
> ImportError: cannot import name RouterSession
>
>
> Here is my platform info:
>
> paraview.x86_64                    4.4.0-2.el7
>  @epel
> paraview-data.noarch               4.4.0-2.el7
>  @epel
> paraview-openmpi.x86_64            4.4.0-2.el7
>  @epel
> python.x86_64                      2.7.5-34.el7
> @base
> python-twisted.noarch              12.1.0-2.el7.nux
> @nux-dextop
> python-twisted-conch.x86_64        12.1.0-2.el7.nux
> @nux-dextop
> python-twisted-core.x86_64         12.2.0-4.el7
> @base
> python-twisted-lore.x86_64         12.1.0-2.el7.nux
> @nux-dextop
> python-twisted-mail.x86_64         12.1.0-2.el7.nux
> @nux-dextop
> python-twisted-names.x86_64        12.1.0-2.el7.nux
> @nux-dextop
> python-twisted-news.x86_64         12.1.0-2.el7.nux
> @nux-dextop
> python-twisted-runner.x86_64       12.1.0-2.el7.nux
> @nux-dextop
> python-twisted-web.x86_64          12.1.0-4.el7
> @base
> python-twisted-words.x86_64        12.2.0-4.el7
> @base
>
> CentOS Linux release 7.1.1503 (Core)
>
>
> Please share any ideas on how to resolve this situation ? - apart from
> building my own from code checkout.
>
> Regards
>
> A
>
>
>
>
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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autobahn==0.8.13
zope.interface==4.1.1
twisted==14.0.0

From Amit.Goel at ucf.edu  Tue Feb  2 11:56:46 2016
From: Amit.Goel at ucf.edu (Amit Goel)
Date: Tue, 2 Feb 2016 16:56:46 +0000
Subject: [Paraview] ParaViewWeb issues
In-Reply-To: <CABObKxc_0FXkjPM3Fzuw_UPL4xHBEBQpxjPVvmG+XEF2yPi4Xw@mail.gmail.com>
References: <mailman.2142.1454426856.8420.paraview@paraview.org>
 <2B55F63C-1A66-4B0D-9A2E-D834F6E481C7@ucf.edu>
 <CABObKxc_0FXkjPM3Fzuw_UPL4xHBEBQpxjPVvmG+XEF2yPi4Xw@mail.gmail.com>
Message-ID: <A12D049A-C166-4704-AEAA-BFC680C2982B@ucf.edu>

Thanks Sebastien

I was using autobahn 0.12.1 that was automatically installed using pip. I guess they removed RouterSession to somewhere else. Installation of autobahn==0.8.13 started the webserver and I was able to see pvweb home page at local:8080

Thanks once again.

Regards

Amit



On Feb 2, 2016, at 11:35 AM, Sebastien Jourdain <sebastien.jourdain at kitware.com<mailto:sebastien.jourdain at kitware.com>> wrote:

Hi Amit,

I'm not familiar with the system package of ParaView on your OS, but usually the Python dependencies are managed within ParaView.

So either you have a conflict between your system python library and the one embedded inside ParaView,
or if that package is properly managed by the system, that mean you are missing some python library.

For the later use case, I've attached what are required by ParaViewWeb to work.

Seb

On Tue, Feb 2, 2016 at 8:31 AM, Amit Goel <Amit.Goel at ucf.edu<mailto:Amit.Goel at ucf.edu>> wrote:
Hi

When I try to run ParaViewWeb, I get error:

pvpython /usr/lib64/paraview/site-packages/paraview/web/pv_web_visualizer.py --content /usr/share/paraview/www/ --data-dir ~/as/build/output --port 8080

Traceback (most recent call last):
 File "/usr/lib64/paraview/site-packages/paraview/web/pv_web_visualizer.py", line 85, in <module>
   from paraview.web import wamp      as pv_wamp
 File "/usr/lib64/paraview/site-packages/paraview/web/wamp.py", line 5, in <module>
   from vtk.web import wamp
 File "/usr/lib64/paraview/site-packages/vtk/web/wamp.py", line 22, in <module>
   from autobahn.twisted.wamp import ApplicationSession, RouterSession
ImportError: cannot import name RouterSession


Here is my platform info:

paraview.x86_64                    4.4.0-2.el7                         @epel
paraview-data.noarch               4.4.0-2.el7                         @epel
paraview-openmpi.x86_64            4.4.0-2.el7                         @epel
python.x86_64                      2.7.5-34.el7                        @base
python-twisted.noarch              12.1.0-2.el7.nux                    @nux-dextop
python-twisted-conch.x86_64        12.1.0-2.el7.nux                    @nux-dextop
python-twisted-core.x86_64         12.2.0-4.el7                        @base
python-twisted-lore.x86_64         12.1.0-2.el7.nux                    @nux-dextop
python-twisted-mail.x86_64         12.1.0-2.el7.nux                    @nux-dextop
python-twisted-names.x86_64        12.1.0-2.el7.nux                    @nux-dextop
python-twisted-news.x86_64         12.1.0-2.el7.nux                    @nux-dextop
python-twisted-runner.x86_64       12.1.0-2.el7.nux                    @nux-dextop
python-twisted-web.x86_64          12.1.0-4.el7                        @base
python-twisted-words.x86_64        12.2.0-4.el7                        @base

CentOS Linux release 7.1.1503 (Core)


Please share any ideas on how to resolve this situation ? - apart from building my own from code checkout.

Regards

A








_______________________________________________
Powered by www.kitware.com<http://www.kitware.com/>

Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html

Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView

Search the list archives at: http://markmail.org/search/?q=ParaView

Follow this link to subscribe/unsubscribe:
http://public.kitware.com/mailman/listinfo/paraview

<requirements.txt>

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From sebastien.jourdain at kitware.com  Tue Feb  2 12:34:24 2016
From: sebastien.jourdain at kitware.com (Sebastien Jourdain)
Date: Tue, 2 Feb 2016 10:34:24 -0700
Subject: [Paraview] ParaViewWeb issues
In-Reply-To: <A12D049A-C166-4704-AEAA-BFC680C2982B@ucf.edu>
References: <mailman.2142.1454426856.8420.paraview@paraview.org>
 <2B55F63C-1A66-4B0D-9A2E-D834F6E481C7@ucf.edu>
 <CABObKxc_0FXkjPM3Fzuw_UPL4xHBEBQpxjPVvmG+XEF2yPi4Xw@mail.gmail.com>
 <A12D049A-C166-4704-AEAA-BFC680C2982B@ucf.edu>
Message-ID: <CABObKxcEu6wgNuK4Jr87aJ0sLdWGbQp75Xiq_BPyvYZHAQATtg@mail.gmail.com>

Cool glad that worked...

Autobahn evolved to use crossbar.io, but we are not ready yet for moving to
crossbar.io on the server side hence the 'old' version.

Seb

On Tue, Feb 2, 2016 at 9:56 AM, Amit Goel <Amit.Goel at ucf.edu> wrote:

> Thanks Sebastien
>
> I was using autobahn 0.12.1 that was automatically installed using pip. I
> guess they removed RouterSession to somewhere else. Installation
> of autobahn==0.8.13 started the webserver and I was able to see pvweb home
> page at local:8080
>
> Thanks once again.
>
> Regards
>
> Amit
>
>
>
> On Feb 2, 2016, at 11:35 AM, Sebastien Jourdain <
> sebastien.jourdain at kitware.com> wrote:
>
> Hi Amit,
>
> I'm not familiar with the system package of ParaView on your OS, but
> usually the Python dependencies are managed within ParaView.
>
> So either you have a conflict between your system python library and the
> one embedded inside ParaView,
> or if that package is properly managed by the system, that mean you are
> missing some python library.
>
> For the later use case, I've attached what are required by ParaViewWeb to
> work.
>
> Seb
>
> On Tue, Feb 2, 2016 at 8:31 AM, Amit Goel <Amit.Goel at ucf.edu> wrote:
>
>> Hi
>>
>> When I try to run ParaViewWeb, I get error:
>>
>> pvpython
>> /usr/lib64/paraview/site-packages/paraview/web/pv_web_visualizer.py
>> --content /usr/share/paraview/www/ --data-dir ~/as/build/output --port 8080
>>
>> Traceback (most recent call last):
>>  File
>> "/usr/lib64/paraview/site-packages/paraview/web/pv_web_visualizer.py", line
>> 85, in <module>
>>    from paraview.web import wamp      as pv_wamp
>>  File "/usr/lib64/paraview/site-packages/paraview/web/wamp.py", line 5,
>> in <module>
>>    from vtk.web import wamp
>>  File "/usr/lib64/paraview/site-packages/vtk/web/wamp.py", line 22, in
>> <module>
>>    from autobahn.twisted.wamp import ApplicationSession, RouterSession
>> ImportError: cannot import name RouterSession
>>
>>
>> Here is my platform info:
>>
>> paraview.x86_64                    4.4.0-2.el7
>>  @epel
>> paraview-data.noarch               4.4.0-2.el7
>>  @epel
>> paraview-openmpi.x86_64            4.4.0-2.el7
>>  @epel
>> python.x86_64                      2.7.5-34.el7
>> @base
>> python-twisted.noarch              12.1.0-2.el7.nux
>> @nux-dextop
>> python-twisted-conch.x86_64        12.1.0-2.el7.nux
>> @nux-dextop
>> python-twisted-core.x86_64         12.2.0-4.el7
>> @base
>> python-twisted-lore.x86_64         12.1.0-2.el7.nux
>> @nux-dextop
>> python-twisted-mail.x86_64         12.1.0-2.el7.nux
>> @nux-dextop
>> python-twisted-names.x86_64        12.1.0-2.el7.nux
>> @nux-dextop
>> python-twisted-news.x86_64         12.1.0-2.el7.nux
>> @nux-dextop
>> python-twisted-runner.x86_64       12.1.0-2.el7.nux
>> @nux-dextop
>> python-twisted-web.x86_64          12.1.0-4.el7
>> @base
>> python-twisted-words.x86_64        12.2.0-4.el7
>> @base
>>
>> CentOS Linux release 7.1.1503 (Core)
>>
>>
>> Please share any ideas on how to resolve this situation ? - apart from
>> building my own from code checkout.
>>
>> Regards
>>
>> A
>>
>>
>>
>>
>>
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>
> <requirements.txt>
>
>
>
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From cyndyb at email.arizona.edu  Tue Feb  2 12:26:51 2016
From: cyndyb at email.arizona.edu (Hart, Cynthia Joyce - (cyndyb))
Date: Tue, 2 Feb 2016 17:26:51 +0000
Subject: [Paraview] Using Paraview for modeling orbital motion of many
 objects/database connectivity?
Message-ID: <B35AD61F-BF9C-494B-A366-7CD2304D6DBF@email.arizona.edu>

Hi folks -

Forgive me if this question is entirely out of scope of Paraview?s capabilities, but I?m new to the software, and still learning what it can and cannot do.  I have a rather large scale project that I have been asked to look into the feasibility of.  It involves a simulation of the display of a multitude of satellite ?and other? objects orbiting the Earth, with the correct orbital motions, and in an animated display, no less.  Due to the number of objects, I have the idea in mind that a database of some sort is the best way to store the information of the objects, and have whatever is driving the simulation call on that database.  I have no idea if Paraview could be - or has been - used with a database.  Is this at all do-able with Paraview?  And if not, what do you think I ought to be considering, for something of this scope?

Thanks much,

Cynthia


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From david.thompson at kitware.com  Tue Feb  2 12:46:48 2016
From: david.thompson at kitware.com (David Thompson)
Date: Tue, 2 Feb 2016 12:46:48 -0500
Subject: [Paraview] Using Paraview for modeling orbital motion of many
	objects/database connectivity?
In-Reply-To: <B35AD61F-BF9C-494B-A366-7CD2304D6DBF@email.arizona.edu>
References: <B35AD61F-BF9C-494B-A366-7CD2304D6DBF@email.arizona.edu>
Message-ID: <1B264AD5-D195-4526-81F6-290BCAE0FBA2@kitware.com>

Hi Cynthia,

It's not something ParaView supports without any modifications, but it is not impossible. VTK, the toolkit ParaView is built upon, provides ways to populate tables from SQL database queries and also ways to turn those tables into polygonal datasets that can be rendered. It would take a small amount of programming to connect those two together into a ParaView pipeline object.

Depending on what's in the database, it would probably also require some filters to turn the satellite ephemera into a time-series of point coordinates for animations. I'm less certain about how much work that would be; I'm not familiar enough with orbital mechanics to know how much work that is.

	Hope that helps,
	David

> On Feb 2, 2016, at 12:26 PM, Hart, Cynthia Joyce - (cyndyb) <cyndyb at email.arizona.edu> wrote:
> 
> Hi folks -
> 
> Forgive me if this question is entirely out of scope of Paraview?s capabilities, but I?m new to the software, and still learning what it can and cannot do.  I have a rather large scale project that I have been asked to look into the feasibility of.  It involves a simulation of the display of a multitude of satellite ?and other? objects orbiting the Earth, with the correct orbital motions, and in an animated display, no less.  Due to the number of objects, I have the idea in mind that a database of some sort is the best way to store the information of the objects, and have whatever is driving the simulation call on that database.  I have no idea if Paraview could be - or has been - used with a database.  Is this at all do-able with Paraview?  And if not, what do you think I ought to be considering, for something of this scope?  
> 
> Thanks much,
> 
> Cynthia
> 
> 
> _______________________________________________
> Powered by www.kitware.com
> 
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
> 
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
> 
> Search the list archives at: http://markmail.org/search/?q=ParaView
> 
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview


From tim.gallagher at gatech.edu  Tue Feb  2 13:26:02 2016
From: tim.gallagher at gatech.edu (Tim Gallagher)
Date: Tue, 2 Feb 2016 13:26:02 -0500 (EST)
Subject: [Paraview] Using Paraview for modeling orbital motion of
	many	objects/database connectivity?
In-Reply-To: <1B264AD5-D195-4526-81F6-290BCAE0FBA2@kitware.com>
Message-ID: <691926310.26088431.1454437562045.JavaMail.root@mail.gatech.edu>

I've also pulled data from a database using a ProgrammableSource and connecting to the database with Python and then building the needed VTK structures from there to pass through the pipeline. I don't know about the built-in ways to use data from SQL, I just did it a brute-force way and got my data from the DB into numpy arrays and then used the numpy->VTK tools to go from there.

Tim

----- Original Message -----
From: "David Thompson" <david.thompson at kitware.com>
To: "Cynthia Joyce Hart - (cyndyb)" <cyndyb at email.arizona.edu>
Cc: paraview at paraview.org
Sent: Tuesday, February 2, 2016 12:46:48 PM
Subject: Re: [Paraview] Using Paraview for modeling orbital motion of many	objects/database connectivity?

Hi Cynthia,

It's not something ParaView supports without any modifications, but it is not impossible. VTK, the toolkit ParaView is built upon, provides ways to populate tables from SQL database queries and also ways to turn those tables into polygonal datasets that can be rendered. It would take a small amount of programming to connect those two together into a ParaView pipeline object.

Depending on what's in the database, it would probably also require some filters to turn the satellite ephemera into a time-series of point coordinates for animations. I'm less certain about how much work that would be; I'm not familiar enough with orbital mechanics to know how much work that is.

	Hope that helps,
	David

> On Feb 2, 2016, at 12:26 PM, Hart, Cynthia Joyce - (cyndyb) <cyndyb at email.arizona.edu> wrote:
> 
> Hi folks -
> 
> Forgive me if this question is entirely out of scope of Paraview?s capabilities, but I?m new to the software, and still learning what it can and cannot do.  I have a rather large scale project that I have been asked to look into the feasibility of.  It involves a simulation of the display of a multitude of satellite ?and other? objects orbiting the Earth, with the correct orbital motions, and in an animated display, no less.  Due to the number of objects, I have the idea in mind that a database of some sort is the best way to store the information of the objects, and have whatever is driving the simulation call on that database.  I have no idea if Paraview could be - or has been - used with a database.  Is this at all do-able with Paraview?  And if not, what do you think I ought to be considering, for something of this scope?  
> 
> Thanks much,
> 
> Cynthia
> 
> 
> _______________________________________________
> Powered by www.kitware.com
> 
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
> 
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
> 
> Search the list archives at: http://markmail.org/search/?q=ParaView
> 
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview

_______________________________________________
Powered by www.kitware.com

Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html

Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView

Search the list archives at: http://markmail.org/search/?q=ParaView

Follow this link to subscribe/unsubscribe:
http://public.kitware.com/mailman/listinfo/paraview

From samuelkey at bresnan.net  Tue Feb  2 13:46:27 2016
From: samuelkey at bresnan.net (Samuel Key)
Date: Tue, 2 Feb 2016 11:46:27 -0700
Subject: [Paraview] Using Paraview for modeling orbital motion of many
 objects/database connectivity?
In-Reply-To: <1B264AD5-D195-4526-81F6-290BCAE0FBA2@kitware.com>
References: <B35AD61F-BF9C-494B-A366-7CD2304D6DBF@email.arizona.edu>
 <1B264AD5-D195-4526-81F6-290BCAE0FBA2@kitware.com>
Message-ID: <56B0F983.2060004@bresnan.net>

Cynthia--

If I may backup from David's comments --

If by "database" you mean a simulation results file format that ParaView 
can read and that stores such things satellite position, velocity, size, 
type, nominal orbit altitudes, .... as a function of time, the answer is 
"Yes."

Personally, I use the EnSight format for such data (large deformations 
of 3-D solids, shells, beams,...).  It is well documented format and was 
originated for large datum sets. I can tell you more about it, if you like.

On the other hand, if you already have a database that contains the 
satellite info of interest, David's comments is the place to start.

--Sam




On 2/2/2016 10:46 AM, David Thompson wrote:
> Hi Cynthia,
>
> It's not something ParaView supports without any modifications, but it is not impossible. VTK, the toolkit ParaView is built upon, provides ways to populate tables from SQL database queries and also ways to turn those tables into polygonal datasets that can be rendered. It would take a small amount of programming to connect those two together into a ParaView pipeline object.
>
> Depending on what's in the database, it would probably also require some filters to turn the satellite ephemera into a time-series of point coordinates for animations. I'm less certain about how much work that would be; I'm not familiar enough with orbital mechanics to know how much work that is.
>
> 	Hope that helps,
> 	David
>
>> On Feb 2, 2016, at 12:26 PM, Hart, Cynthia Joyce - (cyndyb)<cyndyb at email.arizona.edu>  wrote:
>>
>> Hi folks -
>>
>> Forgive me if this question is entirely out of scope of Paraview?s capabilities, but I?m new to the software, and still learning what it can and cannot do.  I have a rather large scale project that I have been asked to look into the feasibility of.  It involves a simulation of the display of a multitude of satellite ?and other? objects orbiting the Earth, with the correct orbital motions, and in an animated display, no less.  Due to the number of objects, I have the idea in mind that a database of some sort is the best way to store the information of the objects, and have whatever is driving the simulation call on that database.  I have no idea if Paraview could be - or has been - used with a database.  Is this at all do-able with Paraview?  And if not, what do you think I ought to be considering, for something of this scope?
>>
>> Thanks much,
>>
>> Cynthia
>>
>>
>> _______________________________________________
>> Powered bywww.kitware.com
>>
>> Visit other Kitware open-source projects athttp://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at:http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
> _______________________________________________
> Powered bywww.kitware.com
>
> Visit other Kitware open-source projects athttp://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:http://paraview.org/Wiki/ParaView
>
> Search the list archives at:http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview


From utkarsh.ayachit at kitware.com  Tue Feb  2 14:51:07 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Tue, 2 Feb 2016 14:51:07 -0500
Subject: [Paraview] Erode and Dilate filters
In-Reply-To: <7e15a17eaf114976af395ac1380b5f6c@ES01AMSNLNT.srn.sandia.gov>
References: <7e15a17eaf114976af395ac1380b5f6c@ES01AMSNLNT.srn.sandia.gov>
Message-ID: <CADHSJjC4NGid5N48N5NKadTCLUFs8aaoW9=EH0mO9w-eb-duGg@mail.gmail.com>

Attached XML should do the trick. Load this as a plugin and then two
filters will be available ContinuousDilate3D and ContinuousErode3D.

On Mon, Feb 1, 2016 at 3:17 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> Does anyone know the python (programmable filter, I suppose) needed to
> expose the Erode and Dilate filters?
>
>
>
> Thanks,
>
>
>
> Alan
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From wascott at sandia.gov  Tue Feb  2 14:53:30 2016
From: wascott at sandia.gov (Scott, W Alan)
Date: Tue, 2 Feb 2016 19:53:30 +0000
Subject: [Paraview] [EXTERNAL] Re:  Erode and Dilate filters
In-Reply-To: <CADHSJjC4NGid5N48N5NKadTCLUFs8aaoW9=EH0mO9w-eb-duGg@mail.gmail.com>
References: <7e15a17eaf114976af395ac1380b5f6c@ES01AMSNLNT.srn.sandia.gov>
 <CADHSJjC4NGid5N48N5NKadTCLUFs8aaoW9=EH0mO9w-eb-duGg@mail.gmail.com>
Message-ID: <D2D6573F.7316%wascott@sandia.gov>

Excellent, thanks.

Alan

On 2/2/16, 12:51 PM, "Utkarsh Ayachit" <utkarsh.ayachit at kitware.com> wrote:

>Attached XML should do the trick. Load this as a plugin and then two
>filters will be available ContinuousDilate3D and ContinuousErode3D.
>
>On Mon, Feb 1, 2016 at 3:17 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>> Does anyone know the python (programmable filter, I suppose) needed to
>> expose the Erode and Dilate filters?
>>
>>
>>
>> Thanks,
>>
>>
>>
>> Alan
>>
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>


From mirzadeh at gmail.com  Tue Feb  2 22:36:49 2016
From: mirzadeh at gmail.com (Mohammad Mirzadeh)
Date: Tue, 2 Feb 2016 22:36:49 -0500
Subject: [Paraview] pvtu loading error with PV 5
Message-ID: <CAKsPKw=tievgOYv8fN0gzGKE2op_3y0L8ZexbuFf4tmTez1EWQ@mail.gmail.com>

Hi,

I have a pvtu file that I can open in 4.4 but not the latest release, i.e.
5. Here's the error I get from PV:

ERROR: In
/Users/kitware/buildbot-slave/paraview-bigmac-osx-shared-release_opengl2_osx10_7_qt4_superbuild/source-paraview/VTK/IO/XMLParser/vtkXMLParser.cxx,
line 397

vtkXMLDataParser (0x7fbb56511d50): Error parsing XML in stream at line 15,
column 72, byte index 707: not well-formed (invalid token)



ERROR: In
/Users/kitware/buildbot-slave/paraview-bigmac-osx-shared-release_opengl2_osx10_7_qt4_superbuild/source-paraview/VTK/IO/XML/vtkXMLReader.cxx,
line 456

vtkXMLPUnstructuredGridReader (0x7fbb579d9c00): Error parsing input file.
ReadXMLInformation aborting.



ERROR: In
/Users/kitware/buildbot-slave/paraview-bigmac-osx-shared-release_opengl2_osx10_7_qt4_superbuild/source-paraview/VTK/Common/ExecutionModel/vtkExecutive.cxx,
line 784

vtkPVCompositeDataPipeline (0x7fbb565261b0): Algorithm
vtkXMLPUnstructuredGridReader(0x7fbb579d9c00) returned failure for request:
vtkInformation (0x7fbb5718bf20)

Debug: Off

Modified Time: 2617827

Reference Count: 1

Registered Events: (none)

Request: REQUEST_INFORMATION

FORWARD_DIRECTION: 0

ALGORITHM_AFTER_FORWARD: 1


This is on OSX 10.11.3. Has there been any changes to the pvtu format with
the new release? The vtu file itself opens both in 4.4 and 5.


Thanks,
Mohammad
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From mirzadeh at gmail.com  Tue Feb  2 23:01:53 2016
From: mirzadeh at gmail.com (Mohammad Mirzadeh)
Date: Tue, 2 Feb 2016 23:01:53 -0500
Subject: [Paraview] pvtu loading error with PV 5
In-Reply-To: <CAKsPKw=tievgOYv8fN0gzGKE2op_3y0L8ZexbuFf4tmTez1EWQ@mail.gmail.com>
References: <CAKsPKw=tievgOYv8fN0gzGKE2op_3y0L8ZexbuFf4tmTez1EWQ@mail.gmail.com>
Message-ID: <CAKsPKw=ki2LqEBV3gFuT6WnFxm=DOM4hXhV3PsRG3jHsOsUw-Q@mail.gmail.com>

Alright. Found the culprit! There was an '&' in the filename which
apparently XML does not like.
http://stackoverflow.com/questions/1328538/how-do-i-escape-ampersands-in-xml

FYI, if for whatever reason you have '&' in your filename, you can replace
it with *"**&#038;" ... *or simply dont use '&' ... Also the same problem
exists in 4.4. I was opening another file by mistake.

Mohammad

On Tue, Feb 2, 2016 at 10:36 PM, Mohammad Mirzadeh <mirzadeh at gmail.com>
wrote:

> Hi,
>
> I have a pvtu file that I can open in 4.4 but not the latest release, i.e.
> 5. Here's the error I get from PV:
>
> ERROR: In
> /Users/kitware/buildbot-slave/paraview-bigmac-osx-shared-release_opengl2_osx10_7_qt4_superbuild/source-paraview/VTK/IO/XMLParser/vtkXMLParser.cxx,
> line 397
>
> vtkXMLDataParser (0x7fbb56511d50): Error parsing XML in stream at line 15,
> column 72, byte index 707: not well-formed (invalid token)
>
>
>
> ERROR: In
> /Users/kitware/buildbot-slave/paraview-bigmac-osx-shared-release_opengl2_osx10_7_qt4_superbuild/source-paraview/VTK/IO/XML/vtkXMLReader.cxx,
> line 456
>
> vtkXMLPUnstructuredGridReader (0x7fbb579d9c00): Error parsing input file.
> ReadXMLInformation aborting.
>
>
>
> ERROR: In
> /Users/kitware/buildbot-slave/paraview-bigmac-osx-shared-release_opengl2_osx10_7_qt4_superbuild/source-paraview/VTK/Common/ExecutionModel/vtkExecutive.cxx,
> line 784
>
> vtkPVCompositeDataPipeline (0x7fbb565261b0): Algorithm
> vtkXMLPUnstructuredGridReader(0x7fbb579d9c00) returned failure for request:
> vtkInformation (0x7fbb5718bf20)
>
> Debug: Off
>
> Modified Time: 2617827
>
> Reference Count: 1
>
> Registered Events: (none)
>
> Request: REQUEST_INFORMATION
>
> FORWARD_DIRECTION: 0
>
> ALGORITHM_AFTER_FORWARD: 1
>
>
> This is on OSX 10.11.3. Has there been any changes to the pvtu format with
> the new release? The vtu file itself opens both in 4.4 and 5.
>
>
> Thanks,
> Mohammad
>
>
>
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From ben.boeckel at kitware.com  Wed Feb  3 09:59:44 2016
From: ben.boeckel at kitware.com (Ben Boeckel)
Date: Wed, 3 Feb 2016 09:59:44 -0500
Subject: [Paraview] compiling mdf error
In-Reply-To: <2018308886.296550.1454407585835.JavaMail.yahoo@mail.yahoo.com>
References: <CAB5Fpx4kev4oODqn2Kfk7=zx15VPZb-Mx7YEJ-=pM4i-6AyYuQ@mail.gmail.com>
 <2018308886.296550.1454407585835.JavaMail.yahoo@mail.yahoo.com>
Message-ID: <20160203145944.GC1749@megas.kitware.com>

On Tue, Feb 02, 2016 at 10:06:25 +0000, mersad mostaghimi via ParaView wrote:
> Dear Cory Quammenthe first problem is solved but there is an other
> problem? which is again an MD5 problem. this time is in VTK
> installation during installing Paraview from source files.

If you don't need testing data, you can disable it with:

    -DBUILD_TESTING:BOOL=OFF

or toggling it in either ccmake or cmake-gui.

--Ben

From andy.bauer at kitware.com  Wed Feb  3 11:09:30 2016
From: andy.bauer at kitware.com (Andy Bauer)
Date: Wed, 3 Feb 2016 11:09:30 -0500
Subject: [Paraview] Tuple ordering of 2nd order tensors and changes to
	vtkCellDerivatives
Message-ID: <CAMaOp+ECpiitiMFLtXjB8Cap+0MFOY0FeRugHHQQHbCPmjNHdQ@mail.gmail.com>

Hi,

I wanted to inform everyone that there is some inconsistencies in the way
2nd order tensors are represented in VTK data arrays. The vtkGradientFilter
outputs in C/row-major ordering while the vtkCellDerivatives filter outputs
in Fortran/column-major ordering. There are other inconsistencies to this
as well. Officially, VTK uses C/row-major ordering for tuples. An example
of this is the vtkCell::Derivatives() method (
http://www.vtk.org/doc/nightly/html/classvtkCell.html#aff3d8332e9d7d556a9d2e9f91173d068).


Martin Genet has brought this inconsistency to light with his work on
vtkCellDerivatives in changing this to row-major ordering output. 40e05b6a
is his commit that fixed this issue for the filter, its documentation and
how vector_gradient and strain are computed in the VTK numpy interface. He
additionally removed the vtkTensor which was only used by
vtkCellDerivatives to transpose the 2nd order tensor's output.

There may be other 2nd order tensor ordering inconsistencies in VTK that
should be cleaned up as well and we hope to address those ASAP. The most
difficult of these will likely be in the readers that bring in 2nd order
tensors. I would encourage those that are familiar with specific readers to
spend a couple of minutes verifying the correct ordering from them.

I'll be adding in notes about this fix to
Documentation/Doxygen/ChangesVTK-7-1.md shortly.

Best regards,
Andy

ps. A big thanks to Martin for his fixes and his patience on getting this
through! This is his second and third commit to VTK.
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From dennis.schridde at uni-heidelberg.de  Wed Feb  3 12:19:21 2016
From: dennis.schridde at uni-heidelberg.de (Dennis Schridde)
Date: Wed, 03 Feb 2016 18:19:21 +0100
Subject: [Paraview] ParaView 5.0.0 with Mesa 11.2-git OSMesa /
	off-screen-rendering
Message-ID: <b7c9bcc8-d006-4c10-b1e7-56894f48d7a3@uni-heidelberg.de>

Hello!

I built [1] ParaView 5.0.0 against OSMesa 11.2 from Git 
(11.2.0-0.devel.8.24ea81a.fc24 from Fedora Rawhide [2]), but I am running 
into following problem:

ERROR: In 
/ParaView-v5.0.0-source/VTK/Rendering/OpenGL2/vtkOpenGLRenderWindow.cxx, 
line 587
vtkOSOpenGLRenderWindow (0x10dfcb0): GL version 2.1 with the gpu_shader4 
extension is not supported by your graphics driver but is required for the 
new OpenGL rendering backend. Please update your OpenGL driver. If you are 
using Mesa please make sure you have version 10.6.
5 or later and make sure your driver in Mesa supports OpenGL 3.2.

This error message does not seem to make sense, because ParaView seems to 
be taking the OSMesaCreateContextAttribs codepath and thus should get a 
context that satisfies both OpenGL version requirements mentioned in the 
error message, judging from a KitWare blog post [3], an earlier post on 
this mailinglist [4] and the corresponding commit to Mesa [5].

Steps to reproduce:

1. Download skull.raw from [6] and place it in $HOME/paraview-samples/
2. Run: git clone --branch 5.0.0-osmesa 
https://github.com/urzds/paraview-docker.git
3. Run: docker build --tag paraview:5.0.0-osmesa paraview-docker
4. Run: docker run -i -p 11111:11111 -v $HOME/paraview-samples/:/mnt/ 
paraview:5.0.0-osmesa
5. Download ParaView 5.0.0 (Linux 64-bit) from [7] and extract it
6. Start the binary ParaView 5.0.0 client you just downloaded
7. Connect to localhost:11111
8. Verify that the connection works: Press left-mouse and drag -> observe 
movement of the coordinate system in the lower left corner
9. Open /mnt/skull.raw
10. In "Properties", set "Data Scalar Type = unsigned char" and "Data 
Extend x,y,z = 0..255", press "Apply"
11. Verify that the file loaded correctly: See a white wireframe box 
appear, press left-mouse and drag -> observe movement of the box
12. Press the "Contour" button
13. In "Properties", press "Apply"
14. Verify that the contour displays properly: See parts of the jaw appear 
in white colour, press left-mouse and drag -> observe movement of the 
displayed contour
15. In "Properties", change the "Value Range" to "50"
16. See the dialogue box: "The server side has disconnected"
17. Have a look at the server output:
```
Waiting for client...
Connection URL: cs://c0dbd3b1f304:11111
Accepting connection(s): c0dbd3b1f304:11111
Client connected.
GL_Version: 2.1 Mesa 11.2.0-devel (git-24ea81a)
ERROR: In 
/ParaView-v5.0.0-source/VTK/Rendering/OpenGL2/vtkOpenGLRenderWindow.cxx, 
line 587
vtkOSOpenGLRenderWindow (0x2dc9c60): GL version 2.1 with the gpu_shader4 
extension is not supported by your graphics driver but is required for the 
new OpenGL rendering backend. Please update your OpenGL driver. If you are 
using Mesa please make sure you have version 10.6$
5 or later and make sure your driver in Mesa supports OpenGL 3.2.

ERROR: In 
/ParaView-v5.0.0-source/VTK/Rendering/OpenGL2/vtkShaderProgram.cxx, line 
369
[...]
10:   Module:    vtkPolyDataFS.glsl
[...]
ERROR: In 
/ParaView-v5.0.0-source/VTK/Rendering/OpenGL2/vtkShaderProgram.cxx, line 
370
vtkShaderProgram (0x46ef030): 0:2(12): error: extension 
`GL_EXT_gpu_shader4' unsupported in fragment shader
```

It appears that ParaView indeed takes the OSMesaCreateContextAttribs 
codepath, but is unable to get a context from it. Attached patch, that 
you'll also find in the 5.0.0-osmesa-debug branch of abovementioned GitHub 
repository, makes ParaView output the following:
URZDS: Using OSMesa 11.2
URZDS: OSMesaCreateContextAttribs available
URZDS: Context: (nil)

It would be great if someone could help me debug this and possibly find a 
solution.

Best regards,
Dennis

[1]: https://github.com/urzds/paraview-docker/blob/5.0.0-osmesa/Dockerfile
[2]: https://apps.fedoraproject.org/packages/mesa
[3]: http://www.kitware.com/blog/home/post/999
[4]: http://public.kitware.com/pipermail/paraview/2015-December/035804.html
[5]: 
http://cgit.freedesktop.org/mesa/mesa/commit/?id=a34e7612dcde891121e355e78c058f138a34c31c
[6]: 
http://www.gris.uni-tuebingen.de/edu/areas/scivis/volren/datasets/datasets.html
[7]: http://www.paraview.org/download/
-- 
Universit?t Heidelberg, Universit?tsrechenzentrum (URZ)
Servicebereich Future IT - Research & Education (FIRE)

Tel. +49 6221 54-4519, Fax +49 6221 54-5581
dennis.schridde at uni-heidelberg.de

http://www.urz.uni-heidelberg.de/

Ruprecht-Karls-Universit?t Heidelberg
Universit?tsrechenzentrum
Im Neuenheimer Feld 293, 69120 Heidelberg
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From utkarsh.ayachit at kitware.com  Wed Feb  3 13:43:05 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Wed, 3 Feb 2016 13:43:05 -0500
Subject: [Paraview] ParaView 5.0.0 with Mesa 11.2-git OSMesa /
	off-screen-rendering
In-Reply-To: <b7c9bcc8-d006-4c10-b1e7-56894f48d7a3@uni-heidelberg.de>
References: <b7c9bcc8-d006-4c10-b1e7-56894f48d7a3@uni-heidelberg.de>
Message-ID: <CADHSJjDSXvMwbNeLxXkmA4x9WZSrT2e=OrPG+uK4sSeK83ge_A@mail.gmail.com>

I suspect OSMesa is not built with gallium/llvm driver and hence it's
failing to give a 3.2 context. I am a little rusty on where to find
info about Fedora packages. Can you check how the osmesa library is
being configured?

On Wed, Feb 3, 2016 at 12:19 PM, Dennis Schridde
<dennis.schridde at uni-heidelberg.de> wrote:
> Hello!
>
> I built [1] ParaView 5.0.0 against OSMesa 11.2 from Git
> (11.2.0-0.devel.8.24ea81a.fc24 from Fedora Rawhide [2]), but I am running
> into following problem:
>
> ERROR: In
> /ParaView-v5.0.0-source/VTK/Rendering/OpenGL2/vtkOpenGLRenderWindow.cxx,
> line 587
> vtkOSOpenGLRenderWindow (0x10dfcb0): GL version 2.1 with the gpu_shader4
> extension is not supported by your graphics driver but is required for the
> new OpenGL rendering backend. Please update your OpenGL driver. If you are
> using Mesa please make sure you have version 10.6.
> 5 or later and make sure your driver in Mesa supports OpenGL 3.2.
>
> This error message does not seem to make sense, because ParaView seems to be
> taking the OSMesaCreateContextAttribs codepath and thus should get a context
> that satisfies both OpenGL version requirements mentioned in the error
> message, judging from a KitWare blog post [3], an earlier post on this
> mailinglist [4] and the corresponding commit to Mesa [5].
>
> Steps to reproduce:
>
> 1. Download skull.raw from [6] and place it in $HOME/paraview-samples/
> 2. Run: git clone --branch 5.0.0-osmesa
> https://github.com/urzds/paraview-docker.git
> 3. Run: docker build --tag paraview:5.0.0-osmesa paraview-docker
> 4. Run: docker run -i -p 11111:11111 -v $HOME/paraview-samples/:/mnt/
> paraview:5.0.0-osmesa
> 5. Download ParaView 5.0.0 (Linux 64-bit) from [7] and extract it
> 6. Start the binary ParaView 5.0.0 client you just downloaded
> 7. Connect to localhost:11111
> 8. Verify that the connection works: Press left-mouse and drag -> observe
> movement of the coordinate system in the lower left corner
> 9. Open /mnt/skull.raw
> 10. In "Properties", set "Data Scalar Type = unsigned char" and "Data Extend
> x,y,z = 0..255", press "Apply"
> 11. Verify that the file loaded correctly: See a white wireframe box appear,
> press left-mouse and drag -> observe movement of the box
> 12. Press the "Contour" button
> 13. In "Properties", press "Apply"
> 14. Verify that the contour displays properly: See parts of the jaw appear
> in white colour, press left-mouse and drag -> observe movement of the
> displayed contour
> 15. In "Properties", change the "Value Range" to "50"
> 16. See the dialogue box: "The server side has disconnected"
> 17. Have a look at the server output:
> ```
> Waiting for client...
> Connection URL: cs://c0dbd3b1f304:11111
> Accepting connection(s): c0dbd3b1f304:11111
> Client connected.
> GL_Version: 2.1 Mesa 11.2.0-devel (git-24ea81a)
> ERROR: In
> /ParaView-v5.0.0-source/VTK/Rendering/OpenGL2/vtkOpenGLRenderWindow.cxx,
> line 587
> vtkOSOpenGLRenderWindow (0x2dc9c60): GL version 2.1 with the gpu_shader4
> extension is not supported by your graphics driver but is required for the
> new OpenGL rendering backend. Please update your OpenGL driver. If you are
> using Mesa please make sure you have version 10.6$
> 5 or later and make sure your driver in Mesa supports OpenGL 3.2.
>
> ERROR: In
> /ParaView-v5.0.0-source/VTK/Rendering/OpenGL2/vtkShaderProgram.cxx, line 369
> [...]
> 10:   Module:    vtkPolyDataFS.glsl
> [...]
> ERROR: In
> /ParaView-v5.0.0-source/VTK/Rendering/OpenGL2/vtkShaderProgram.cxx, line 370
> vtkShaderProgram (0x46ef030): 0:2(12): error: extension `GL_EXT_gpu_shader4'
> unsupported in fragment shader
> ```
>
> It appears that ParaView indeed takes the OSMesaCreateContextAttribs
> codepath, but is unable to get a context from it. Attached patch, that
> you'll also find in the 5.0.0-osmesa-debug branch of abovementioned GitHub
> repository, makes ParaView output the following:
> URZDS: Using OSMesa 11.2
> URZDS: OSMesaCreateContextAttribs available
> URZDS: Context: (nil)
>
> It would be great if someone could help me debug this and possibly find a
> solution.
>
> Best regards,
> Dennis
>
> [1]: https://github.com/urzds/paraview-docker/blob/5.0.0-osmesa/Dockerfile
> [2]: https://apps.fedoraproject.org/packages/mesa
> [3]: http://www.kitware.com/blog/home/post/999
> [4]: http://public.kitware.com/pipermail/paraview/2015-December/035804.html
> [5]:
> http://cgit.freedesktop.org/mesa/mesa/commit/?id=a34e7612dcde891121e355e78c058f138a34c31c
> [6]:
> http://www.gris.uni-tuebingen.de/edu/areas/scivis/volren/datasets/datasets.html
> [7]: http://www.paraview.org/download/
> --
> Universit?t Heidelberg, Universit?tsrechenzentrum (URZ)
> Servicebereich Future IT - Research & Education (FIRE)
>
> Tel. +49 6221 54-4519, Fax +49 6221 54-5581
> dennis.schridde at uni-heidelberg.de
>
> http://www.urz.uni-heidelberg.de/
>
> Ruprecht-Karls-Universit?t Heidelberg
> Universit?tsrechenzentrum
> Im Neuenheimer Feld 293, 69120 Heidelberg
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>

From jonas.lantz at liu.se  Thu Feb  4 03:54:14 2016
From: jonas.lantz at liu.se (Jonas Lantz)
Date: Thu, 4 Feb 2016 08:54:14 +0000
Subject: [Paraview] Save data in ensight format using pvpython fails
Message-ID: <1C6B1AE477F51D42B1B0D5ABA31C187D224FD4D6@MB1-2010.ad.liu.se>

Hi,
I have trouble saving data in ensight format using python on windows 7 and Paraview 4.3.1 and 5.0.0 64-bit. This is a simplified version of what I am doing:  start a trace in the Paraview GUI, load ensight file, merge blocks, file > save data as ensight, stop trace.  When doing this in the GUI it works as intended, and data is saved in ensight format. However, when I try to use pvpython and the python file from the trace, I get "No BlockId was found" a couple of thousand times in the output when it is trying to save. The files are created but the file size is zero bytes. My input data is a multi-block dataset on an unstructured grid.

So the strange thing is that everything works when saving through the GUI, but not when using pvpython and the trace from the GUI... Any idea on how to proceed?.

A simplified version of my trace is as follows:
from paraview.simple import *
paraview.simple._DisableFirstRenderCameraReset()
# create a new 'EnSight Reader'
casefilecase = EnSightReader(CaseFileName='path to ensight case file')
casefilecase.PointArrays = ['Velocity']
# create a new 'Merge Blocks'
mergeBlocks1 = MergeBlocks(Input=casefilecase)
# save data
SaveData('path to save ensight file', proxy=mergeBlocks1)



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From tim.gallagher at gatech.edu  Thu Feb  4 08:24:45 2016
From: tim.gallagher at gatech.edu (Tim Gallagher)
Date: Thu, 4 Feb 2016 08:24:45 -0500 (EST)
Subject: [Paraview] Building on Cray systems
In-Reply-To: <1541092.26391154.1454591963051.JavaMail.root@mail.gatech.edu>
Message-ID: <1108975880.26391625.1454592285639.JavaMail.root@mail.gatech.edu>

Hi everybody,

I'm about to endeavor on the always fun process of building Paraview on Cray systems, specifically Copper (ERDC), Garnet (ERDC) and Excalibur (ARL). Little is ever easy on these systems and I've never succeeded at building paraview on them in the past. However, we want to run with co-processing on the compute nodes and so it's time to try again. 

I saw there are some build scripts in the ParaviewSuperbuild for Cray systems. Does anybody know of any documentation or examples on how to use them? What dependencies do I need to build using the superbuild and what can I use that is already on the system? For example -- python, HDF5, zlib, etc are all available, but do I need to build my own versions? 

Is it possible to build just Paraview (not using the superbuild) using the system-installed modules? Does the FREEZE_PYTHON option work or help eliminate the issues of running on the compute nodes? 

If anybody has any advice on the best way to go, I would greatly appreciate it. We need to have python, co-processing, and off-screen rendering enabled; otherwise, it's just the standard build options.

Thanks!

Tim

From thomas.fastl at kcl.ac.uk  Thu Feb  4 08:31:24 2016
From: thomas.fastl at kcl.ac.uk (Fastl, Thomas)
Date: Thu, 4 Feb 2016 13:31:24 +0000
Subject: [Paraview] Warning about Version while Reading File
Message-ID: <HE1PR03MB1083CDDCA5DC82E2675ADF09CCD10@HE1PR03MB1083.eurprd03.prod.outlook.com>

Hello Community,


I just installed ParaView 5.0.0 and loaded a vtk-file which worked under ParaView 4.2.0! Doing so I receive the warning 'Reading file version: 4.2 with older reader version 4.0', suggesting that an outdated vtk version is used to read the file. I should mention that changing the header line in the vtk-file from '# vtk DataFile Version 4.2' to '# vtk DataFile Version 4.2' does the trick, however, I don't understand why ParaView complains? I read that ParaView uses it's own vtk version which seems to be 7.1.0 (see below), so why this warning? Is there anything else I can can do to fix that or is this a bug in ParaView? Thanks!


from __future__import print_function

import vtk

print(vtk.vtkVersion.GetVTKSourceVersion())


Best wishes, Thomas

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From richard.c.angelini.civ at mail.mil  Thu Feb  4 08:54:08 2016
From: richard.c.angelini.civ at mail.mil (Angelini, Richard C (Rick) CIV USARMY RDECOM ARL (US))
Date: Thu, 4 Feb 2016 13:54:08 +0000
Subject: [Paraview] [Non-DoD Source]  Building on Cray systems
In-Reply-To: <1108975880.26391625.1454592285639.JavaMail.root@mail.gatech.edu>
References: <1541092.26391154.1454591963051.JavaMail.root@mail.gatech.edu>
 <1108975880.26391625.1454592285639.JavaMail.root@mail.gatech.edu>
Message-ID: <345817C8A61EA841AAE0120EC1514D95ACD59117@umechpao0.easf.csd.disa.mil>

Tim - I've already built ParaView on all of these systems - there are
modules available to load various version of Paraview.    If you need to do
your own builds to support specific functionality - I can provide you the
build scripts we use on those systems.




-----Original Message-----
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Tim
Gallagher
Sent: Thursday, February 04, 2016 8:25 AM
To: paraview <paraview at paraview.org>
Subject: [Non-DoD Source] [Paraview] Building on Cray systems

All active links contained in this email were disabled.  Please verify the
identity of the sender, and confirm the authenticity of all links contained
within the message prior to copying and pasting the address to a Web
browser.  




----

Hi everybody,

I'm about to endeavor on the always fun process of building Paraview on Cray
systems, specifically Copper (ERDC), Garnet (ERDC) and Excalibur (ARL).
Little is ever easy on these systems and I've never succeeded at building
paraview on them in the past. However, we want to run with co-processing on
the compute nodes and so it's time to try again. 

I saw there are some build scripts in the ParaviewSuperbuild for Cray
systems. Does anybody know of any documentation or examples on how to use
them? What dependencies do I need to build using the superbuild and what can
I use that is already on the system? For example -- python, HDF5, zlib, etc
are all available, but do I need to build my own versions? 

Is it possible to build just Paraview (not using the superbuild) using the
system-installed modules? Does the FREEZE_PYTHON option work or help
eliminate the issues of running on the compute nodes? 

If anybody has any advice on the best way to go, I would greatly appreciate
it. We need to have python, co-processing, and off-screen rendering enabled;
otherwise, it's just the standard build options.

Thanks!

Tim
_______________________________________________
Powered by Caution-www.kitware.com

Visit other Kitware open-source projects at
Caution-http://www.kitware.com/opensource/opensource.html

Please keep messages on-topic and check the ParaView Wiki at:
Caution-http://paraview.org/Wiki/ParaView

Search the list archives at: Caution-http://markmail.org/search/?q=ParaView

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From tim.gallagher at gatech.edu  Thu Feb  4 09:10:42 2016
From: tim.gallagher at gatech.edu (Tim Gallagher)
Date: Thu, 4 Feb 2016 09:10:42 -0500 (EST)
Subject: [Paraview] [Non-DoD Source]  Building on Cray systems
In-Reply-To: <345817C8A61EA841AAE0120EC1514D95ACD59117@umechpao0.easf.csd.disa.mil>
Message-ID: <1409573035.26395615.1454595042788.JavaMail.root@mail.gatech.edu>

Thank you, that would be incredible helpful! Do you have a list of what options your builds support? 

It looks like it doesn't have the co-processing or the development files installed during the build that are needed to link our code to paraview. Those are likely the only two additional options we need.

If you don't mind sending me the build scripts, I can get my version with those options built and tested. If it works fine for me, I can send you back the changes needed and you guys can decide if you want to update your build scripts to turn them on by default in the future. The impact of the two options should be minimal -- if it isn't used by somebody, they wouldn't know it was there. 

I don't know what the best way to share the scripts is for you. If they are already buried on the machines somewhere, I can copy them directly.

Thanks again,

Tim

----- Original Message -----
From: "Richard C Angelini (Rick) CIV USARMY RDECOM ARL (US)" <richard.c.angelini.civ at mail.mil>
To: "tim gallagher" <tim.gallagher at gatech.edu>, "paraview" <paraview at paraview.org>
Sent: Thursday, February 4, 2016 8:54:08 AM
Subject: RE: [Non-DoD Source] [Paraview] Building on Cray systems

Tim - I've already built ParaView on all of these systems - there are
modules available to load various version of Paraview.    If you need to do
your own builds to support specific functionality - I can provide you the
build scripts we use on those systems.




-----Original Message-----
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Tim
Gallagher
Sent: Thursday, February 04, 2016 8:25 AM
To: paraview <paraview at paraview.org>
Subject: [Non-DoD Source] [Paraview] Building on Cray systems

All active links contained in this email were disabled.  Please verify the
identity of the sender, and confirm the authenticity of all links contained
within the message prior to copying and pasting the address to a Web
browser.  




----

Hi everybody,

I'm about to endeavor on the always fun process of building Paraview on Cray
systems, specifically Copper (ERDC), Garnet (ERDC) and Excalibur (ARL).
Little is ever easy on these systems and I've never succeeded at building
paraview on them in the past. However, we want to run with co-processing on
the compute nodes and so it's time to try again. 

I saw there are some build scripts in the ParaviewSuperbuild for Cray
systems. Does anybody know of any documentation or examples on how to use
them? What dependencies do I need to build using the superbuild and what can
I use that is already on the system? For example -- python, HDF5, zlib, etc
are all available, but do I need to build my own versions? 

Is it possible to build just Paraview (not using the superbuild) using the
system-installed modules? Does the FREEZE_PYTHON option work or help
eliminate the issues of running on the compute nodes? 

If anybody has any advice on the best way to go, I would greatly appreciate
it. We need to have python, co-processing, and off-screen rendering enabled;
otherwise, it's just the standard build options.

Thanks!

Tim
_______________________________________________
Powered by Caution-www.kitware.com

Visit other Kitware open-source projects at
Caution-http://www.kitware.com/opensource/opensource.html

Please keep messages on-topic and check the ParaView Wiki at:
Caution-http://paraview.org/Wiki/ParaView

Search the list archives at: Caution-http://markmail.org/search/?q=ParaView

Follow this link to subscribe/unsubscribe:
Caution-http://public.kitware.com/mailman/listinfo/paraview

From andy.bauer at kitware.com  Thu Feb  4 09:15:03 2016
From: andy.bauer at kitware.com (Andy Bauer)
Date: Thu, 4 Feb 2016 09:15:03 -0500
Subject: [Paraview] [Non-DoD Source] Building on Cray systems
In-Reply-To: <345817C8A61EA841AAE0120EC1514D95ACD59117@umechpao0.easf.csd.disa.mil>
References: <1541092.26391154.1454591963051.JavaMail.root@mail.gatech.edu>
 <1108975880.26391625.1454592285639.JavaMail.root@mail.gatech.edu>
 <345817C8A61EA841AAE0120EC1514D95ACD59117@umechpao0.easf.csd.disa.mil>
Message-ID: <CAMaOp+Hef3vt7L7ZiPARYn9kpf=3w54MUOHcH0A51mOffjighA@mail.gmail.com>

Hi Rick,

Did you build ParaView with PARAVIEW_INSTALL_DEVELOPMENT_FILES enabled? Tim
will need that for using Catalyst if he's going to be using your builds but
not if he's going to do his own.

Tim, some questions on what you need:

   - Do you have a specific compiler and version you want/need to use? Same
   thing for MPI implementation.
   - Do you have a specific version of ParaView that you want to use?

I would recommend using the superbuild tools, to build statically with
Python and Mesa. The other libraries can be built with the superbuild
(definitely use system MPI though) for convenience even though for
Catalyst  you probably won't need many of them. The FREEZE_PYTHON option is
to statically linking the other Python modules into the executable. This is
definitely useful for when running with a high number of MPI ranks since
when loading a module (e.g. paraview.simple) in parallel it can really kill
the file system if thousands of processes are simultaneously trying to load
a bunch of Python modules. Note though that this isn't needed for a
Catalyst Python script since that is done specially where process 0 reads
the file and broadcasts it to all of the other processes.

Cheers,

Andy

On Thu, Feb 4, 2016 at 8:54 AM, Angelini, Richard C (Rick) CIV USARMY
RDECOM ARL (US) <richard.c.angelini.civ at mail.mil> wrote:

> Tim - I've already built ParaView on all of these systems - there are
> modules available to load various version of Paraview.    If you need to do
> your own builds to support specific functionality - I can provide you the
> build scripts we use on those systems.
>
>
>
>
> -----Original Message-----
> From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Tim
> Gallagher
> Sent: Thursday, February 04, 2016 8:25 AM
> To: paraview <paraview at paraview.org>
> Subject: [Non-DoD Source] [Paraview] Building on Cray systems
>
> All active links contained in this email were disabled.  Please verify the
> identity of the sender, and confirm the authenticity of all links contained
> within the message prior to copying and pasting the address to a Web
> browser.
>
>
>
>
> ----
>
> Hi everybody,
>
> I'm about to endeavor on the always fun process of building Paraview on
> Cray
> systems, specifically Copper (ERDC), Garnet (ERDC) and Excalibur (ARL).
> Little is ever easy on these systems and I've never succeeded at building
> paraview on them in the past. However, we want to run with co-processing on
> the compute nodes and so it's time to try again.
>
> I saw there are some build scripts in the ParaviewSuperbuild for Cray
> systems. Does anybody know of any documentation or examples on how to use
> them? What dependencies do I need to build using the superbuild and what
> can
> I use that is already on the system? For example -- python, HDF5, zlib, etc
> are all available, but do I need to build my own versions?
>
> Is it possible to build just Paraview (not using the superbuild) using the
> system-installed modules? Does the FREEZE_PYTHON option work or help
> eliminate the issues of running on the compute nodes?
>
> If anybody has any advice on the best way to go, I would greatly appreciate
> it. We need to have python, co-processing, and off-screen rendering
> enabled;
> otherwise, it's just the standard build options.
>
> Thanks!
>
> Tim
> _______________________________________________
> Powered by Caution-www.kitware.com
>
> Visit other Kitware open-source projects at
> Caution-http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> Caution-http://paraview.org/Wiki/ParaView
>
> Search the list archives at: Caution-
> http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> Caution-http://public.kitware.com/mailman/listinfo/paraview
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From tim.gallagher at gatech.edu  Thu Feb  4 09:24:08 2016
From: tim.gallagher at gatech.edu (Tim Gallagher)
Date: Thu, 4 Feb 2016 09:24:08 -0500 (EST)
Subject: [Paraview] [Non-DoD Source] Building on Cray systems
In-Reply-To: <CAMaOp+Hef3vt7L7ZiPARYn9kpf=3w54MUOHcH0A51mOffjighA@mail.gmail.com>
Message-ID: <61036632.26397747.1454595848888.JavaMail.root@mail.gatech.edu>

Andy, 

We don't really care about the compiler or MPI used for paraview. Our code only supports Intel and GNU, but for simplicity I usually build paraview with GNU so everybody can use it. We usually use the default MPI for a system also, which on copper is cray-mpich/7.1.0 currently. 

When we build our code, we have to specify the Catamount toolchain so everything is statically linked because we haven't really figured out how to update everything to use shared libraries on the compute nodes. When we first set up our build environment, shared libraries wasn't an option. If we go that route, will I need the FREEZE_PYTHON option since shared linking won't be available? 

I suppose the proper answer is that we should update our build environment for shared linking rather than static. It's been on my to-do list to figure out for awhile now, but I haven't been able to write the proper toolchain file for it. 

It appears that on copper at least (haven't checked the others), the system install has the libvtkPVPythonCatalyst* libraries (I misspoke in my previous email) but it does not have the development files from the PARAVIEW_INSTALL_DEVELOPMENT_FILES option. That and PARAVIEW_ENABLE_COPROCESSING are the only options in addition to the standard set of build options we need. 

Tim 

----- Original Message -----

From: "Andy Bauer" <andy.bauer at kitware.com> 
To: "Richard C Angelini (Rick) CIV USARMY RDECOM ARL (US)" <richard.c.angelini.civ at mail.mil> 
Cc: "tim gallagher" <tim.gallagher at gatech.edu>, "paraview" <paraview at paraview.org> 
Sent: Thursday, February 4, 2016 9:15:03 AM 
Subject: Re: [Paraview] [Non-DoD Source] Building on Cray systems 




Hi Rick, 

Did you build ParaView with PARAVIEW_INSTALL_DEVELOPMENT_FILES enabled? Tim will need that for using Catalyst if he's going to be using your builds but not if he's going to do his own. 

Tim, some questions on what you need: 

    * Do you have a specific compiler and version you want/need to use? Same thing for MPI implementation. 
    * Do you have a specific version of ParaView that you want to use? 


I would recommend using the superbuild tools, to build statically with Python and Mesa. The other libraries can be built with the superbuild (definitely use system MPI though) for convenience even though for Catalyst you probably won't need many of them. The FREEZE_PYTHON option is to statically linking the other Python modules into the executable. This is definitely useful for when running with a high number of MPI ranks since when loading a module (e.g. paraview.simple) in parallel it can really kill the file system if thousands of processes are simultaneously trying to load a bunch of Python modules. Note though that this isn't needed for a Catalyst Python script since that is done specially where process 0 reads the file and broadcasts it to all of the other processes. 
Cheers, 
Andy 



On Thu, Feb 4, 2016 at 8:54 AM, Angelini, Richard C (Rick) CIV USARMY RDECOM ARL (US) < richard.c.angelini.civ at mail.mil > wrote: 


Tim - I've already built ParaView on all of these systems - there are 
modules available to load various version of Paraview. If you need to do 
your own builds to support specific functionality - I can provide you the 
build scripts we use on those systems. 




-----Original Message----- 
From: ParaView [mailto: paraview-bounces at paraview.org ] On Behalf Of Tim 
Gallagher 
Sent: Thursday, February 04, 2016 8:25 AM 
To: paraview < paraview at paraview.org > 
Subject: [Non-DoD Source] [Paraview] Building on Cray systems 

All active links contained in this email were disabled. Please verify the 
identity of the sender, and confirm the authenticity of all links contained 
within the message prior to copying and pasting the address to a Web 
browser. 




---- 

Hi everybody, 

I'm about to endeavor on the always fun process of building Paraview on Cray 
systems, specifically Copper (ERDC), Garnet (ERDC) and Excalibur (ARL). 
Little is ever easy on these systems and I've never succeeded at building 
paraview on them in the past. However, we want to run with co-processing on 
the compute nodes and so it's time to try again. 

I saw there are some build scripts in the ParaviewSuperbuild for Cray 
systems. Does anybody know of any documentation or examples on how to use 
them? What dependencies do I need to build using the superbuild and what can 
I use that is already on the system? For example -- python, HDF5, zlib, etc 
are all available, but do I need to build my own versions? 

Is it possible to build just Paraview (not using the superbuild) using the 
system-installed modules? Does the FREEZE_PYTHON option work or help 
eliminate the issues of running on the compute nodes? 

If anybody has any advice on the best way to go, I would greatly appreciate 
it. We need to have python, co-processing, and off-screen rendering enabled; 
otherwise, it's just the standard build options. 

Thanks! 

Tim 
_______________________________________________ 
Powered by Caution-www.kitware.com 

Visit other Kitware open-source projects at 
Caution- http://www.kitware.com/opensource/opensource.html 

Please keep messages on-topic and check the ParaView Wiki at: 
Caution- http://paraview.org/Wiki/ParaView 

Search the list archives at: Caution- http://markmail.org/search/?q=ParaView 

Follow this link to subscribe/unsubscribe: 
Caution- http://public.kitware.com/mailman/listinfo/paraview 

_______________________________________________ 
Powered by www.kitware.com 

Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html 

Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView 

Search the list archives at: http://markmail.org/search/?q=ParaView 

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From richard.c.angelini.civ at mail.mil  Thu Feb  4 09:28:56 2016
From: richard.c.angelini.civ at mail.mil (Angelini, Richard C (Rick) CIV USARMY RDECOM ARL (US))
Date: Thu, 4 Feb 2016 14:28:56 +0000
Subject: [Paraview] [Non-DoD Source] Building on Cray systems
In-Reply-To: <CAMaOp+Hef3vt7L7ZiPARYn9kpf=3w54MUOHcH0A51mOffjighA@mail.gmail.com>
References: <1541092.26391154.1454591963051.JavaMail.root@mail.gatech.edu>
 <1108975880.26391625.1454592285639.JavaMail.root@mail.gatech.edu>
 <345817C8A61EA841AAE0120EC1514D95ACD59117@umechpao0.easf.csd.disa.mil>
 <CAMaOp+Hef3vt7L7ZiPARYn9kpf=3w54MUOHcH0A51mOffjighA@mail.gmail.com>
Message-ID: <D2D8C9E5.28F24%Richard.C.Angelini.CIV@mail.mil>

OK ? I didn?t realize that this was for Catalyst development work.   We do no currently install the development files ? but I would think that the best chance for success for inclusion of Catalyst would be a customized build using the same exact compilers/mpi as the linking computational code.   I?ll send Tim build examples directly ?.

________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone:  410-278-6266

From: Andy Bauer <andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>>
Date: Thursday, February 4, 2016 at 9:15 AM
To: Rick Angelini <Richard.C.Angelini.CIV at mail.mil<mailto:Richard.C.Angelini.CIV at mail.mil>>
Cc: "tim.gallagher at gatech.edu<mailto:tim.gallagher at gatech.edu>" <tim.gallagher at gatech.edu<mailto:tim.gallagher at gatech.edu>>, paraview <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: Re: [Paraview] [Non-DoD Source] Building on Cray systems

All active links contained in this email were disabled. Please verify the identity of the sender, and confirm the authenticity of all links contained within the message prior to copying and pasting the address to a Web browser.

________________________________


Hi Rick,

Did you build ParaView with PARAVIEW_INSTALL_DEVELOPMENT_FILES enabled? Tim will need that for using Catalyst if he's going to be using your builds but not if he's going to do his own.

Tim, some questions on what you need:

  *   Do you have a specific compiler and version you want/need to use? Same thing for MPI implementation.
  *   Do you have a specific version of ParaView that you want to use?

I would recommend using the superbuild tools, to build statically with Python and Mesa. The other libraries can be built with the superbuild (definitely use system MPI though) for convenience even though for Catalyst  you probably won't need many of them. The FREEZE_PYTHON option is to statically linking the other Python modules into the executable. This is definitely useful for when running with a high number of MPI ranks since when loading a module (e.g. paraview.simple) in parallel it can really kill the file system if thousands of processes are simultaneously trying to load a bunch of Python modules. Note though that this isn't needed for a Catalyst Python script since that is done specially where process 0 reads the file and broadcasts it to all of the other processes.

Cheers,

Andy

On Thu, Feb 4, 2016 at 8:54 AM, Angelini, Richard C (Rick) CIV USARMY RDECOM ARL (US) <richard.c.angelini.civ at mail.mil<mailto:richard.c.angelini.civ at mail.mil> < Caution-mailto:richard.c.angelini.civ at mail.mil > > wrote:
Tim - I've already built ParaView on all of these systems - there are
modules available to load various version of Paraview.    If you need to do
your own builds to support specific functionality - I can provide you the
build scripts we use on those systems.




-----Original Message-----
From: ParaView [Caution-mailto:paraview-bounces at paraview.org < Caution-mailto:paraview-bounces at paraview.org > ] On Behalf Of Tim
Gallagher
Sent: Thursday, February 04, 2016 8:25 AM
To: paraview <paraview at paraview.org<mailto:paraview at paraview.org> < Caution-mailto:paraview at paraview.org > >
Subject: [Non-DoD Source] [Paraview] Building on Cray systems

All active links contained in this email were disabled.  Please verify the
identity of the sender, and confirm the authenticity of all links contained
within the message prior to copying and pasting the address to a Web
browser.




----

Hi everybody,

I'm about to endeavor on the always fun process of building Paraview on Cray
systems, specifically Copper (ERDC), Garnet (ERDC) and Excalibur (ARL).
Little is ever easy on these systems and I've never succeeded at building
paraview on them in the past. However, we want to run with co-processing on
the compute nodes and so it's time to try again.

I saw there are some build scripts in the ParaviewSuperbuild for Cray
systems. Does anybody know of any documentation or examples on how to use
them? What dependencies do I need to build using the superbuild and what can
I use that is already on the system? For example -- python, HDF5, zlib, etc
are all available, but do I need to build my own versions?

Is it possible to build just Paraview (not using the superbuild) using the
system-installed modules? Does the FREEZE_PYTHON option work or help
eliminate the issues of running on the compute nodes?

If anybody has any advice on the best way to go, I would greatly appreciate
it. We need to have python, co-processing, and off-screen rendering enabled;
otherwise, it's just the standard build options.

Thanks!

Tim
_______________________________________________
Powered by Caution-Caution-www.kitware.com < Caution-http://Caution-Caution-www.kitware.com >

Visit other Kitware open-source projects at
Caution-Caution-http://www.kitware.com/opensource/opensource.html < Caution-http://www.kitware.com/opensource/opensource.html >

Please keep messages on-topic and check the ParaView Wiki at:
Caution-Caution-http://paraview.org/Wiki/ParaView < Caution-http://paraview.org/Wiki/ParaView >

Search the list archives at: Caution-Caution-http://markmail.org/search/?q=ParaView < Caution-http://markmail.org/search/?q=ParaView >

Follow this link to subscribe/unsubscribe:
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_______________________________________________
Powered by Caution-www.kitware.com < Caution-http://www.kitware.com >

Visit other Kitware open-source projects at Caution-http://www.kitware.com/opensource/opensource.html < Caution-http://www.kitware.com/opensource/opensource.html >

Please keep messages on-topic and check the ParaView Wiki at: Caution-http://paraview.org/Wiki/ParaView < Caution-http://paraview.org/Wiki/ParaView >

Search the list archives at: Caution-http://markmail.org/search/?q=ParaView < Caution-http://markmail.org/search/?q=ParaView >

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From neilsrini at gmail.com  Thu Feb  4 09:30:44 2016
From: neilsrini at gmail.com (Neil Srinivasan)
Date: Thu, 4 Feb 2016 14:30:44 +0000
Subject: [Paraview] how to draw a mesh in preview
Message-ID: <40FD5381-BF59-4EB8-B5DC-2127DA9997B5@gmail.com>

Hi I am new to Paraview

Can you help

I have data in a CSV spreadsheet. 


It contains the xyz point coordinates of a 3D shape (20,000+ nodes). 

The file also contains the triangulation coordinates in 3 separate columns for these nodes (40000 + triangulations). These create the faces of the mesh

I can work out how to plot the points, using 

Filter?Table to points. 


How do I plot the faces?
Do the 3 columns need to be turned into an array?


And how do I colour the faces or contour them by another value (called "bi" in the spreadsheet)



here is an example of the spreadsheet

nn = node number

the 3d coordinates of the points are x, y, z

and the faces of the mesh are specified by (XYZ)

I WISH TO PLOT Points (x, y, x) , draw faces (XYZ) colour by ?bi"



in matlab

it would be


trisurf(Tri,X,Y,Z,C) 


where Tri = array(XYX)

X,Y,Z = (x, y, z)

c= "bi"





nn	x	y	z	X	Y	Z	uni	bi
0	39.527	28.202	160.219	3435	19658	2764	3.86942	0.74871
1	70.804	-2.966	157.578	3161	17204	9466	6.64361	0.78373
2	48.982	-25.674	109.022	18424	17467	16955	5.02491	1.0451
3	83.514	-9.096	120.988	13600	19721	2669	4.47977	0.9348
4	-16.04	-39.749	188.467	1564	10099	10091	1.90873	0.73286
5	74.526	-3.096	174.347	21598	19018	21205	8.4263	0.70594
6	54.93	-56.347	151.496	21283	11341	18399	7.53334	2.17128
7	56.936	-20.131	186.177	1171	2723	20833	7.16118	1.44875
8	-14.627	-47.1	162.185	51	15729	15865	2.13939	0.70887
9	38.207	-59.201	147.993	9331	5851	9106	5.83457	4.32971
10	50.645	-32.04	110.418	310	3513	9121	5.3741	1.14543





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From andy.bauer at kitware.com  Thu Feb  4 09:37:11 2016
From: andy.bauer at kitware.com (Andy Bauer)
Date: Thu, 4 Feb 2016 09:37:11 -0500
Subject: [Paraview] [Non-DoD Source] Building on Cray systems
In-Reply-To: <61036632.26397747.1454595848888.JavaMail.root@mail.gatech.edu>
References: <CAMaOp+Hef3vt7L7ZiPARYn9kpf=3w54MUOHcH0A51mOffjighA@mail.gmail.com>
 <61036632.26397747.1454595848888.JavaMail.root@mail.gatech.edu>
Message-ID: <CAMaOp+H1HdgBJmcHr-GWn=O9JgSDd=ubYioEwFgokZdUvOzfpg@mail.gmail.com>

Hi Tim,

I would recommend the ParaView superbuild script at
Scripts/Sites/Cray-PrgEnv-cross-compile.sh for building PV 5.0.

The options you want to give it are the following:
Cray-PrgEnv-cross-compile.sh <comp> </path/to/cmake>
</temp/download/directory> </install/directory>

Here, comp needs to be the string used to load the program environment,
e.g. "PrgEnv-[gnu/gcc/Gnu] on those machines.

I used this to build a PV 5.0 pre-release version on Cori at NERSC and it
worked just fine. It doesn't have an option to freeze python but after
running that script you can go into the newly created
cross/paraview/src/paraview-build subdirectory and switch it to that.

Another thing is if you're using the Intel compilers you may need to do a
"module load gcc" when building and running your code. Intel's C++11
compilers rely on the GCC header files and libraries for some stuff and
without gcc loaded it will give errors like "missing GLIBC".

Good luck and let us know how it goes!

Best,
Andy



On Thu, Feb 4, 2016 at 9:24 AM, Tim Gallagher <tim.gallagher at gatech.edu>
wrote:

> Andy,
>
> We don't really care about the compiler or MPI used for paraview. Our code
> only supports Intel and GNU, but for simplicity I usually build paraview
> with GNU so everybody can use it. We usually use the default MPI for a
> system also, which on copper is cray-mpich/7.1.0 currently.
>
> When we build our code, we have to specify the Catamount toolchain so
> everything is statically linked because we haven't really figured out how
> to update everything to use shared libraries on the compute nodes. When we
> first set up our build environment, shared libraries wasn't an option. If
> we go that route, will I need the FREEZE_PYTHON option since shared linking
> won't be available?
>
> I suppose the proper answer is that we should update our build environment
> for shared linking rather than static. It's been on my to-do list to figure
> out for awhile now, but I haven't been able to write the proper toolchain
> file for it.
>
> It appears that on copper at least (haven't checked the others), the
> system install has the libvtkPVPythonCatalyst* libraries (I misspoke in my
> previous email) but it does not have the development files from the
> PARAVIEW_INSTALL_DEVELOPMENT_FILES option. That and
> PARAVIEW_ENABLE_COPROCESSING are the only options in addition to the
> standard set of build options we need.
>
> Tim
>
> ------------------------------
> *From: *"Andy Bauer" <andy.bauer at kitware.com>
> *To: *"Richard C Angelini (Rick) CIV USARMY RDECOM ARL (US)" <
> richard.c.angelini.civ at mail.mil>
> *Cc: *"tim gallagher" <tim.gallagher at gatech.edu>, "paraview" <
> paraview at paraview.org>
> *Sent: *Thursday, February 4, 2016 9:15:03 AM
> *Subject: *Re: [Paraview] [Non-DoD Source] Building on Cray systems
>
> Hi Rick,
>
> Did you build ParaView with PARAVIEW_INSTALL_DEVELOPMENT_FILES enabled?
> Tim will need that for using Catalyst if he's going to be using your builds
> but not if he's going to do his own.
>
> Tim, some questions on what you need:
>
>    - Do you have a specific compiler and version you want/need to use?
>    Same thing for MPI implementation.
>    - Do you have a specific version of ParaView that you want to use?
>
> I would recommend using the superbuild tools, to build statically with
> Python and Mesa. The other libraries can be built with the superbuild
> (definitely use system MPI though) for convenience even though for
> Catalyst  you probably won't need many of them. The FREEZE_PYTHON option is
> to statically linking the other Python modules into the executable. This is
> definitely useful for when running with a high number of MPI ranks since
> when loading a module (e.g. paraview.simple) in parallel it can really kill
> the file system if thousands of processes are simultaneously trying to load
> a bunch of Python modules. Note though that this isn't needed for a
> Catalyst Python script since that is done specially where process 0 reads
> the file and broadcasts it to all of the other processes.
>
> Cheers,
>
> Andy
>
> On Thu, Feb 4, 2016 at 8:54 AM, Angelini, Richard C (Rick) CIV USARMY
> RDECOM ARL (US) <richard.c.angelini.civ at mail.mil> wrote:
>
>> Tim - I've already built ParaView on all of these systems - there are
>> modules available to load various version of Paraview.    If you need to
>> do
>> your own builds to support specific functionality - I can provide you the
>> build scripts we use on those systems.
>>
>>
>>
>>
>> -----Original Message-----
>> From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Tim
>> Gallagher
>> Sent: Thursday, February 04, 2016 8:25 AM
>> To: paraview <paraview at paraview.org>
>> Subject: [Non-DoD Source] [Paraview] Building on Cray systems
>>
>> All active links contained in this email were disabled.  Please verify the
>> identity of the sender, and confirm the authenticity of all links
>> contained
>> within the message prior to copying and pasting the address to a Web
>> browser.
>>
>>
>>
>>
>> ----
>>
>> Hi everybody,
>>
>> I'm about to endeavor on the always fun process of building Paraview on
>> Cray
>> systems, specifically Copper (ERDC), Garnet (ERDC) and Excalibur (ARL).
>> Little is ever easy on these systems and I've never succeeded at building
>> paraview on them in the past. However, we want to run with co-processing
>> on
>> the compute nodes and so it's time to try again.
>>
>> I saw there are some build scripts in the ParaviewSuperbuild for Cray
>> systems. Does anybody know of any documentation or examples on how to use
>> them? What dependencies do I need to build using the superbuild and what
>> can
>> I use that is already on the system? For example -- python, HDF5, zlib,
>> etc
>> are all available, but do I need to build my own versions?
>>
>> Is it possible to build just Paraview (not using the superbuild) using the
>> system-installed modules? Does the FREEZE_PYTHON option work or help
>> eliminate the issues of running on the compute nodes?
>>
>> If anybody has any advice on the best way to go, I would greatly
>> appreciate
>> it. We need to have python, co-processing, and off-screen rendering
>> enabled;
>> otherwise, it's just the standard build options.
>>
>> Thanks!
>>
>> Tim
>> _______________________________________________
>> Powered by Caution-www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> Caution-http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> Caution-http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: Caution-
>> http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> Caution-http://public.kitware.com/mailman/listinfo/paraview
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>
>
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From cory.quammen at kitware.com  Thu Feb  4 11:00:27 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Thu, 4 Feb 2016 11:00:27 -0500
Subject: [Paraview] Warning about Version while Reading File
In-Reply-To: <HE1PR03MB1083CDDCA5DC82E2675ADF09CCD10@HE1PR03MB1083.eurprd03.prod.outlook.com>
References: <HE1PR03MB1083CDDCA5DC82E2675ADF09CCD10@HE1PR03MB1083.eurprd03.prod.outlook.com>
Message-ID: <CAB5Fpx53zNWh2KzpscVO7WfR5nrN-7Z-KdGDuhu3+F1dewEekg@mail.gmail.com>

Thomas,

I'm surprised your file didn't cause a complaint in ParaView 4.2. The
legacy VTK file reader in VTK hasn't changed in quite some years. What
software writes your VTK file? If it were written with VTK (perhaps by
way of ParaView), the file version number should be 4.2.

By the way, this shouldn't be a problem other than annoying you with
the warning message.

Cory

On Thu, Feb 4, 2016 at 8:31 AM, Fastl, Thomas <thomas.fastl at kcl.ac.uk> wrote:
> Hello Community,
>
>
> I just installed ParaView 5.0.0 and loaded a vtk-file which worked under
> ParaView 4.2.0! Doing so I receive the warning 'Reading file version: 4.2
> with older reader version 4.0', suggesting that an outdated vtk version is
> used to read the file. I should mention that changing the header line in the
> vtk-file from '# vtk DataFile Version 4.2' to '# vtk DataFile Version 4.2'
> does the trick, however, I don't understand why ParaView complains? I read
> that ParaView uses it's own vtk version which seems to be 7.1.0 (see below),
> so why this warning? Is there anything else I can can do to fix that or is
> this a bug in ParaView? Thanks!
>
>
> from __future__import print_function
>
> import vtk
>
> print(vtk.vtkVersion.GetVTKSourceVersion())
>
>
> Best wishes, Thomas
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.

From berk.geveci at kitware.com  Thu Feb  4 11:20:06 2016
From: berk.geveci at kitware.com (Berk Geveci)
Date: Thu, 4 Feb 2016 11:20:06 -0500
Subject: [Paraview] Warning about Version while Reading File
In-Reply-To: <CAB5Fpx53zNWh2KzpscVO7WfR5nrN-7Z-KdGDuhu3+F1dewEekg@mail.gmail.com>
References: <HE1PR03MB1083CDDCA5DC82E2675ADF09CCD10@HE1PR03MB1083.eurprd03.prod.outlook.com>
 <CAB5Fpx53zNWh2KzpscVO7WfR5nrN-7Z-KdGDuhu3+F1dewEekg@mail.gmail.com>
Message-ID: <CAE32kpWHK1VcRvEJXbSy8ND=CaQrfFqWBOOhV_5yq2JG+LC0vA@mail.gmail.com>

Actually, we changed how the ghost levels are handled and had to update the
format accordingly. It may be related to that. Dan would know more.

Best,
-berk

On Thu, Feb 4, 2016 at 11:00 AM, Cory Quammen <cory.quammen at kitware.com>
wrote:

> Thomas,
>
> I'm surprised your file didn't cause a complaint in ParaView 4.2. The
> legacy VTK file reader in VTK hasn't changed in quite some years. What
> software writes your VTK file? If it were written with VTK (perhaps by
> way of ParaView), the file version number should be 4.2.
>
> By the way, this shouldn't be a problem other than annoying you with
> the warning message.
>
> Cory
>
> On Thu, Feb 4, 2016 at 8:31 AM, Fastl, Thomas <thomas.fastl at kcl.ac.uk>
> wrote:
> > Hello Community,
> >
> >
> > I just installed ParaView 5.0.0 and loaded a vtk-file which worked under
> > ParaView 4.2.0! Doing so I receive the warning 'Reading file version: 4.2
> > with older reader version 4.0', suggesting that an outdated vtk version
> is
> > used to read the file. I should mention that changing the header line in
> the
> > vtk-file from '# vtk DataFile Version 4.2' to '# vtk DataFile Version
> 4.2'
> > does the trick, however, I don't understand why ParaView complains? I
> read
> > that ParaView uses it's own vtk version which seems to be 7.1.0 (see
> below),
> > so why this warning? Is there anything else I can can do to fix that or
> is
> > this a bug in ParaView? Thanks!
> >
> >
> > from __future__import print_function
> >
> > import vtk
> >
> > print(vtk.vtkVersion.GetVTKSourceVersion())
> >
> >
> > Best wishes, Thomas
> >
> >
> >
> > _______________________________________________
> > Powered by www.kitware.com
> >
> > Visit other Kitware open-source projects at
> > http://www.kitware.com/opensource/opensource.html
> >
> > Please keep messages on-topic and check the ParaView Wiki at:
> > http://paraview.org/Wiki/ParaView
> >
> > Search the list archives at: http://markmail.org/search/?q=ParaView
> >
> > Follow this link to subscribe/unsubscribe:
> > http://public.kitware.com/mailman/listinfo/paraview
> >
>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From dan.lipsa at kitware.com  Thu Feb  4 11:43:31 2016
From: dan.lipsa at kitware.com (Dan Lipsa)
Date: Thu, 4 Feb 2016 11:43:31 -0500
Subject: [Paraview] Warning about Version while Reading File
In-Reply-To: <CAE32kpWHK1VcRvEJXbSy8ND=CaQrfFqWBOOhV_5yq2JG+LC0vA@mail.gmail.com>
References: <HE1PR03MB1083CDDCA5DC82E2675ADF09CCD10@HE1PR03MB1083.eurprd03.prod.outlook.com>
 <CAB5Fpx53zNWh2KzpscVO7WfR5nrN-7Z-KdGDuhu3+F1dewEekg@mail.gmail.com>
 <CAE32kpWHK1VcRvEJXbSy8ND=CaQrfFqWBOOhV_5yq2JG+LC0vA@mail.gmail.com>
Message-ID: <CADwGrVq6c2Cj_4fkT0xNe=mYAqEtMvdyOJUc_GA99F4eA+pRZw@mail.gmail.com>

Hi Thomas,
I am surprised that version 4.2 gets in the file. In our last upgrade to
the file format we increased the version from 3.0 to 4.0.
So format 4.2 is not out yet. I wonder if Paraview writes that.

How did you generate the file?

Thanks,
Dan


On Thu, Feb 4, 2016 at 11:20 AM, Berk Geveci <berk.geveci at kitware.com>
wrote:

> Actually, we changed how the ghost levels are handled and had to update
> the format accordingly. It may be related to that. Dan would know more.
>
> Best,
> -berk
>
> On Thu, Feb 4, 2016 at 11:00 AM, Cory Quammen <cory.quammen at kitware.com>
> wrote:
>
>> Thomas,
>>
>> I'm surprised your file didn't cause a complaint in ParaView 4.2. The
>> legacy VTK file reader in VTK hasn't changed in quite some years. What
>> software writes your VTK file? If it were written with VTK (perhaps by
>> way of ParaView), the file version number should be 4.2.
>>
>> By the way, this shouldn't be a problem other than annoying you with
>> the warning message.
>>
>> Cory
>>
>> On Thu, Feb 4, 2016 at 8:31 AM, Fastl, Thomas <thomas.fastl at kcl.ac.uk>
>> wrote:
>> > Hello Community,
>> >
>> >
>> > I just installed ParaView 5.0.0 and loaded a vtk-file which worked under
>> > ParaView 4.2.0! Doing so I receive the warning 'Reading file version:
>> 4.2
>> > with older reader version 4.0', suggesting that an outdated vtk version
>> is
>> > used to read the file. I should mention that changing the header line
>> in the
>> > vtk-file from '# vtk DataFile Version 4.2' to '# vtk DataFile Version
>> 4.2'
>> > does the trick, however, I don't understand why ParaView complains? I
>> read
>> > that ParaView uses it's own vtk version which seems to be 7.1.0 (see
>> below),
>> > so why this warning? Is there anything else I can can do to fix that or
>> is
>> > this a bug in ParaView? Thanks!
>> >
>> >
>> > from __future__import print_function
>> >
>> > import vtk
>> >
>> > print(vtk.vtkVersion.GetVTKSourceVersion())
>> >
>> >
>> > Best wishes, Thomas
>> >
>> >
>> >
>> > _______________________________________________
>> > Powered by www.kitware.com
>> >
>> > Visit other Kitware open-source projects at
>> > http://www.kitware.com/opensource/opensource.html
>> >
>> > Please keep messages on-topic and check the ParaView Wiki at:
>> > http://paraview.org/Wiki/ParaView
>> >
>> > Search the list archives at: http://markmail.org/search/?q=ParaView
>> >
>> > Follow this link to subscribe/unsubscribe:
>> > http://public.kitware.com/mailman/listinfo/paraview
>> >
>>
>>
>>
>> --
>> Cory Quammen
>> R&D Engineer
>> Kitware, Inc.
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>
>
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From thomas.fastl at kcl.ac.uk  Thu Feb  4 12:58:07 2016
From: thomas.fastl at kcl.ac.uk (Fastl, Thomas)
Date: Thu, 4 Feb 2016 17:58:07 +0000
Subject: [Paraview] Warning about Version while Reading File
In-Reply-To: <CADwGrVq6c2Cj_4fkT0xNe=mYAqEtMvdyOJUc_GA99F4eA+pRZw@mail.gmail.com>
References: <HE1PR03MB1083CDDCA5DC82E2675ADF09CCD10@HE1PR03MB1083.eurprd03.prod.outlook.com>
 <CAB5Fpx53zNWh2KzpscVO7WfR5nrN-7Z-KdGDuhu3+F1dewEekg@mail.gmail.com>
 <CAE32kpWHK1VcRvEJXbSy8ND=CaQrfFqWBOOhV_5yq2JG+LC0vA@mail.gmail.com>,
 <CADwGrVq6c2Cj_4fkT0xNe=mYAqEtMvdyOJUc_GA99F4eA+pRZw@mail.gmail.com>
Message-ID: <HE1PR03MB1083F54970C84CBD05A86023CCD10@HE1PR03MB1083.eurprd03.prod.outlook.com>

Hello,


I'm really sorry for the confusion: When writing a file using ParaView I obtain 4.0 in the header, but I had a script to generate file from Matlab and for some reason I wrote 4.2 in the header of all my files. This didn't cause any problems with an older version of ParaView 4.2.0, but throws a warning in ParaView 5.0.0. Problem solved and sorry again, that was unnecessary....!


Best, Thomas

________________________________
From: Dan Lipsa <dan.lipsa at kitware.com>
Sent: Thursday, February 4, 2016 4:43 PM
To: Berk Geveci
Cc: Cory Quammen; Fastl, Thomas; paraview at paraview.org
Subject: Re: [Paraview] Warning about Version while Reading File

Hi Thomas,
I am surprised that version 4.2 gets in the file. In our last upgrade to the file format we increased the version from 3.0 to 4.0.
So format 4.2 is not out yet. I wonder if Paraview writes that.

How did you generate the file?

Thanks,
Dan


On Thu, Feb 4, 2016 at 11:20 AM, Berk Geveci <berk.geveci at kitware.com<mailto:berk.geveci at kitware.com>> wrote:
Actually, we changed how the ghost levels are handled and had to update the format accordingly. It may be related to that. Dan would know more.

Best,
-berk

On Thu, Feb 4, 2016 at 11:00 AM, Cory Quammen <cory.quammen at kitware.com<mailto:cory.quammen at kitware.com>> wrote:
Thomas,

I'm surprised your file didn't cause a complaint in ParaView 4.2. The
legacy VTK file reader in VTK hasn't changed in quite some years. What
software writes your VTK file? If it were written with VTK (perhaps by
way of ParaView), the file version number should be 4.2.

By the way, this shouldn't be a problem other than annoying you with
the warning message.

Cory

On Thu, Feb 4, 2016 at 8:31 AM, Fastl, Thomas <thomas.fastl at kcl.ac.uk<mailto:thomas.fastl at kcl.ac.uk>> wrote:
> Hello Community,
>
>
> I just installed ParaView 5.0.0 and loaded a vtk-file which worked under
> ParaView 4.2.0! Doing so I receive the warning 'Reading file version: 4.2
> with older reader version 4.0', suggesting that an outdated vtk version is
> used to read the file. I should mention that changing the header line in the
> vtk-file from '# vtk DataFile Version 4.2' to '# vtk DataFile Version 4.2'
> does the trick, however, I don't understand why ParaView complains? I read
> that ParaView uses it's own vtk version which seems to be 7.1.0 (see below),
> so why this warning? Is there anything else I can can do to fix that or is
> this a bug in ParaView? Thanks!
>
>
> from __future__import print_function
>
> import vtk
>
> print(vtk.vtkVersion.GetVTKSourceVersion())
>
>
> Best wishes, Thomas
>
>
>
> _______________________________________________
> Powered by www.kitware.com<http://www.kitware.com>
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>



--
Cory Quammen
R&D Engineer
Kitware, Inc.
_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>

Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html

Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView

Search the list archives at: http://markmail.org/search/?q=ParaView

Follow this link to subscribe/unsubscribe:
http://public.kitware.com/mailman/listinfo/paraview


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From dan.lipsa at kitware.com  Thu Feb  4 13:20:48 2016
From: dan.lipsa at kitware.com (Dan Lipsa)
Date: Thu, 4 Feb 2016 13:20:48 -0500
Subject: [Paraview] Warning about Version while Reading File
In-Reply-To: <HE1PR03MB1083F54970C84CBD05A86023CCD10@HE1PR03MB1083.eurprd03.prod.outlook.com>
References: <HE1PR03MB1083CDDCA5DC82E2675ADF09CCD10@HE1PR03MB1083.eurprd03.prod.outlook.com>
 <CAB5Fpx53zNWh2KzpscVO7WfR5nrN-7Z-KdGDuhu3+F1dewEekg@mail.gmail.com>
 <CAE32kpWHK1VcRvEJXbSy8ND=CaQrfFqWBOOhV_5yq2JG+LC0vA@mail.gmail.com>
 <CADwGrVq6c2Cj_4fkT0xNe=mYAqEtMvdyOJUc_GA99F4eA+pRZw@mail.gmail.com>
 <HE1PR03MB1083F54970C84CBD05A86023CCD10@HE1PR03MB1083.eurprd03.prod.outlook.com>
Message-ID: <CADwGrVpp4OqLsxDmnfU1Yzp27RO3m8O-cy0vsU3OKBWmJi28fg@mail.gmail.com>

Great that you figure it out.

Indeed the older readers did not care about the version. With the newer
readers we had to check the version to deal properly with ghosts.

Dan


On Thu, Feb 4, 2016 at 12:58 PM, Fastl, Thomas <thomas.fastl at kcl.ac.uk>
wrote:

> Hello,
>
>
> I'm really sorry for the confusion: When writing a file using ParaView I
> obtain 4.0 in the header, but I had a script to generate file from Matlab
> and for some reason I wrote 4.2 in the header of all my files. This didn't
> cause any problems with an older version of ParaView 4.2.0, but throws a
> warning in ParaView 5.0.0. Problem solved and sorry again, that was
> unnecessary....!
>
>
> Best, Thomas
>
> ------------------------------
> *From:* Dan Lipsa <dan.lipsa at kitware.com>
> *Sent:* Thursday, February 4, 2016 4:43 PM
> *To:* Berk Geveci
> *Cc:* Cory Quammen; Fastl, Thomas; paraview at paraview.org
> *Subject:* Re: [Paraview] Warning about Version while Reading File
>
> Hi Thomas,
> I am surprised that version 4.2 gets in the file. In our last upgrade to
> the file format we increased the version from 3.0 to 4.0.
> So format 4.2 is not out yet. I wonder if Paraview writes that.
>
> How did you generate the file?
>
> Thanks,
> Dan
>
>
> On Thu, Feb 4, 2016 at 11:20 AM, Berk Geveci <berk.geveci at kitware.com>
> wrote:
>
>> Actually, we changed how the ghost levels are handled and had to update
>> the format accordingly. It may be related to that. Dan would know more.
>>
>> Best,
>> -berk
>>
>> On Thu, Feb 4, 2016 at 11:00 AM, Cory Quammen <cory.quammen at kitware.com>
>> wrote:
>>
>>> Thomas,
>>>
>>> I'm surprised your file didn't cause a complaint in ParaView 4.2. The
>>> legacy VTK file reader in VTK hasn't changed in quite some years. What
>>> software writes your VTK file? If it were written with VTK (perhaps by
>>> way of ParaView), the file version number should be 4.2.
>>>
>>> By the way, this shouldn't be a problem other than annoying you with
>>> the warning message.
>>>
>>> Cory
>>>
>>> On Thu, Feb 4, 2016 at 8:31 AM, Fastl, Thomas <thomas.fastl at kcl.ac.uk>
>>> wrote:
>>> > Hello Community,
>>> >
>>> >
>>> > I just installed ParaView 5.0.0 and loaded a vtk-file which worked
>>> under
>>> > ParaView 4.2.0! Doing so I receive the warning 'Reading file version:
>>> 4.2
>>> > with older reader version 4.0', suggesting that an outdated vtk
>>> version is
>>> > used to read the file. I should mention that changing the header line
>>> in the
>>> > vtk-file from '# vtk DataFile Version 4.2' to '# vtk DataFile Version
>>> 4.2'
>>> > does the trick, however, I don't understand why ParaView complains? I
>>> read
>>> > that ParaView uses it's own vtk version which seems to be 7.1.0 (see
>>> below),
>>> > so why this warning? Is there anything else I can can do to fix that
>>> or is
>>> > this a bug in ParaView? Thanks!
>>> >
>>> >
>>> > from __future__import print_function
>>> >
>>> > import vtk
>>> >
>>> > print(vtk.vtkVersion.GetVTKSourceVersion())
>>> >
>>> >
>>> > Best wishes, Thomas
>>> >
>>> >
>>> >
>>> > _______________________________________________
>>> > Powered by www.kitware.com
>>> >
>>> > Visit other Kitware open-source projects at
>>> > http://www.kitware.com/opensource/opensource.html
>>> >
>>> > Please keep messages on-topic and check the ParaView Wiki at:
>>> > http://paraview.org/Wiki/ParaView
>>> >
>>> > Search the list archives at: http://markmail.org/search/?q=ParaView
>>> >
>>> > Follow this link to subscribe/unsubscribe:
>>> > http://public.kitware.com/mailman/listinfo/paraview
>>> >
>>>
>>>
>>>
>>> --
>>> Cory Quammen
>>> R&D Engineer
>>> Kitware, Inc.
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>
>>
>
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From dinu.patirniche at gmail.com  Thu Feb  4 14:47:14 2016
From: dinu.patirniche at gmail.com (Dinu Patirniche)
Date: Thu, 4 Feb 2016 20:47:14 +0100
Subject: [Paraview] Change the coordinates of a 3D Point
Message-ID: <CAGGY7DrXL16as3vKWh0xhcX+uD4pNBBkph2kP6pjDRNHqpn4dw@mail.gmail.com>

Hi there,

I'm trying to change the coordinates of a 3D Point, and then visualize
it. I managed to change the coordinates of the point via:

import vtk.numpy_interface.dataset_adapter as dsa
pointSource1.UpdatePipeline()
rawData = servermanager.Fetch(pointSource1)
data = dsa.WrapDataObject(data)
data.Points[0][0] = 10


This sets the X-coordinate of the first point in the list to 10. Now,
if I open a spreadsheet view, upon updating  the pipeline, I can see
the manually set value in the table. But in the render-view, the point
stays in the same place. This changes, when I try select the point,
which immediately goes to the right place. Once I cancel the
selection, everything goes back to the original configuration. Also in
the information panel, the span along the X-axes doesn't change during
this whole process at all.

Does anyone know what I have to call, in order to make that change effective?

Thanks,
Dinu

From dinu.patirniche at gmail.com  Thu Feb  4 14:50:28 2016
From: dinu.patirniche at gmail.com (Dinu Patirniche)
Date: Thu, 4 Feb 2016 20:50:28 +0100
Subject: [Paraview] Change the coordinates of a 3D Point
Message-ID: <CAGGY7Dp8Z+18wYMobKyb9nYDAKmjsUs07a4m=vg0V+k-Fei0NA@mail.gmail.com>

Hi there,

I'm trying to change the coordinates of a 3D Point, and then visualize
it. I managed to change the coordinates of the point via:

import vtk.numpy_interface.dataset_adapter as dsa
pointSource1.UpdatePipeline()
rawData = servermanager.Fetch(pointSource1)
data = dsa.WrapDataObject(data)
data.Points[0][0] = 10


This sets the X-coordinate of the first point in the list to 10. Now,
if I open a spreadsheet view, upon updating  the pipeline, I can see
the manually set value in the table. But in the render-view, the point
stays in the same place. This changes, when I try select the point,
which immediately goes to the right place. Once I cancel the
selection, everything goes back to the original configuration. Also in
the information panel, the span along the X-axes doesn't change during
this whole process at all.

Does anyone know what I have to call, in order to make that change effective?

Thanks,
Dinu

From dave.demarle at kitware.com  Thu Feb  4 16:43:19 2016
From: dave.demarle at kitware.com (David E DeMarle)
Date: Thu, 4 Feb 2016 16:43:19 -0500
Subject: [Paraview] Change the coordinates of a 3D Point
In-Reply-To: <CAGGY7Dp8Z+18wYMobKyb9nYDAKmjsUs07a4m=vg0V+k-Fei0NA@mail.gmail.com>
References: <CAGGY7Dp8Z+18wYMobKyb9nYDAKmjsUs07a4m=vg0V+k-Fei0NA@mail.gmail.com>
Message-ID: <CANjZAi9fDcowiZ-tTCP7TvEaHdt5P5aJ0=szyLjWc1CwPq7eSQ@mail.gmail.com>

Think of fetch and the python shell in general as working on copies of the
data in the client. Changes to the copy won't persist. The way it showed up
in the spreadsheet view is kind of fluke.

Try the python programmable filter which works on the data where it lives
on the server. The output of that filter will reflect the changes.


David E DeMarle
Kitware, Inc.
R&D Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909

On Thu, Feb 4, 2016 at 2:50 PM, Dinu Patirniche <dinu.patirniche at gmail.com>
wrote:

> Hi there,
>
> I'm trying to change the coordinates of a 3D Point, and then visualize
> it. I managed to change the coordinates of the point via:
>
> import vtk.numpy_interface.dataset_adapter as dsa
> pointSource1.UpdatePipeline()
> rawData = servermanager.Fetch(pointSource1)
> data = dsa.WrapDataObject(data)
> data.Points[0][0] = 10
>
>
> This sets the X-coordinate of the first point in the list to 10. Now,
> if I open a spreadsheet view, upon updating  the pipeline, I can see
> the manually set value in the table. But in the render-view, the point
> stays in the same place. This changes, when I try select the point,
> which immediately goes to the right place. Once I cancel the
> selection, everything goes back to the original configuration. Also in
> the information panel, the span along the X-axes doesn't change during
> this whole process at all.
>
> Does anyone know what I have to call, in order to make that change
> effective?
>
> Thanks,
> Dinu
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From tim.gallagher at gatech.edu  Fri Feb  5 05:36:39 2016
From: tim.gallagher at gatech.edu (Tim Gallagher)
Date: Fri, 5 Feb 2016 05:36:39 -0500 (EST)
Subject: [Paraview] [Non-DoD Source] Building on Cray systems
In-Reply-To: <CAMaOp+H1HdgBJmcHr-GWn=O9JgSDd=ubYioEwFgokZdUvOzfpg@mail.gmail.com>
Message-ID: <1381337291.26567619.1454668599040.JavaMail.root@mail.gatech.edu>

Sorry if you get this multiple times -- the original was blocked from the PV list because the output log was too big. I can send the log I referred to off-list to anybody who is interested. 

-------------------------------------------------- 

Good morning! 

Thanks Andy and Richard for the advice. 

After banging my head on my keyboard for most of the day yesterday , neither approach worked on Copper. 

For Andy's suggestion of building pv5.0 with the Cray cross compiling script, I got a bunch of errors towards the end. It looks like many things did build, but then those errors about an unknown system kicked in and it seemed to all fall apart. I attached the output log as cray_build_pv5.0.txt 

Richard, I tried your setup as well. I initially was trying to avoid the building CMake step but eventually something in the ParaviewSuperbuild failed because it said it needed CMake 2.8.11 and Copper only has 2.8.10. So, I took a step back and tried to build CMake. When I just do what is in your script -- configure and then make -- the build fails quickly because it says it cannot statically link shared libraries. So I tried to build CMake using the Catamount.cmake toolchain that we use for our application code as well. The initial configuration took over an hour, it sits at 95% for a long time going through the portion where it looks for various headers/features. But eventually it finishes and I tried to build but that failed. I get: 

tgallagh at copper01:~/cmake/build> make 
[ 3%] Built target cmsys 
[ 4%] Built target cmsys_c 
[ 6%] Built target cmzlib 
[ 6%] Building C object Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o 
/u/tgallagh/cmake/cmake/Utilities/cmcurl/lib/strerror.c:32:6: error: #error "strerror_r MUST be either POSIX, glibc or vxworks-style" 
# error "strerror_r MUST be either POSIX, glibc or vxworks-style" 
^ 
make[2]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o] Error 1 
make[1]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/all] Error 2 

So taking a big step backwards here to look at the big picture -- am I (and our lab) just using Cray systems in a fundamentally incorrect way? We've always struggled to get things to build when we never have had issues with SGI/Intel, BlueGene, or IBM machines (even when they were using PowerPC). We used to have all these same issues with our CFD code on Cray as well and the only solution we found was to build all of our codes' libraries statically and drop support for shared libraries. 

I appreciate the help with the scripts. If there's any follow-up advice on what I'm doing wrong in both/either approach, that would be great. 

Thanks, 

Tim 
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From dennis.schridde at uni-heidelberg.de  Fri Feb  5 08:09:26 2016
From: dennis.schridde at uni-heidelberg.de (Dennis Schridde)
Date: Fri, 05 Feb 2016 14:09:26 +0100
Subject: [Paraview]
	=?iso-8859-1?q?ParaView_5=2E0=2E0_with_Mesa_11=2E2-git?=
	=?iso-8859-1?q?_OSMesa_/_off-screen-rendering?=
In-Reply-To: <CADHSJjDSXvMwbNeLxXkmA4x9WZSrT2e=OrPG+uK4sSeK83ge_A@mail.gmail.com>
References: <b7c9bcc8-d006-4c10-b1e7-56894f48d7a3@uni-heidelberg.de>
 <CADHSJjDSXvMwbNeLxXkmA4x9WZSrT2e=OrPG+uK4sSeK83ge_A@mail.gmail.com>
Message-ID: <b1dedf0a-3deb-477e-a75c-f08eea1a2dd8@uni-heidelberg.de>

Hello!

Thanks for that hint. I compared the Fedora specs [1] with the KitWare 
recommendations [2]. The main difference (leaving --enable-{glx,dri,egl} 
and related switches aside) seems to be that Fedora builds with 
--enable-osmesa, while KitWare recommends --enable-gallium-osmesa. Both set 
--with-gallium-drivers=swrast and --enable-gallium-llvm, though.

--Dennis

[1]: https://apps.fedoraproject.org/packages/mesa/sources/spec/
[2]: http://www.kitware.com/blog/home/post/999

On Wednesday, 3 February 2016 19:43:05 CET, Utkarsh Ayachit wrote:
> I suspect OSMesa is not built with gallium/llvm driver and hence it's
> failing to give a 3.2 context. I am a little rusty on where to find
> info about Fedora packages. Can you check how the osmesa library is
> being configured?
>
> On Wed, Feb 3, 2016 at 12:19 PM, Dennis Schridde
> <dennis.schridde at uni-heidelberg.de> wrote:
>> Hello!
>> 
>> I built [1] ParaView 5.0.0 against OSMesa 11.2 from Git
>> (11.2.0-0.devel.8.24ea81a.fc24 from Fedora Rawhide [2]), but I am running
>> into following problem:
>> 
>> ERROR: In ...
>
>

-- 
Universit?t Heidelberg, Universit?tsrechenzentrum (URZ)
Servicebereich Future IT - Research & Education (FIRE)

Tel. +49 6221 54-4519, Fax +49 6221 54-5581
dennis.schridde at uni-heidelberg.de

http://www.urz.uni-heidelberg.de/

Ruprecht-Karls-Universit?t Heidelberg
Universit?tsrechenzentrum
Im Neuenheimer Feld 293, 69120 Heidelberg

From dennis_conklin at goodyear.com  Fri Feb  5 08:53:40 2016
From: dennis_conklin at goodyear.com (Dennis Conklin)
Date: Fri, 5 Feb 2016 13:53:40 +0000
Subject: [Paraview] Simple questions on Points in Unstructured Grid
Message-ID: <SN1PR0701MB2029BDB2C3AC73D0E6B4B8069FD20@SN1PR0701MB2029.namprd07.prod.outlook.com>

All,

I need to write a routine to find voids in a mesh but I don't understand some simple stuff about points.

I want to take a section of points in a given box - say a range of Theta and range of Y to select the points in the box - I used Find Data but Trace didn't seem to give me the full set of parameters for that

Then I want to sort that subset in order of radius so that I can assign to each node the difference in radius between itself and the next outboard node in the set - the last node gets zero.  Any large values for this variable would identify the voids in the mesh.

The simple things that I don't understand are

1.      How to get that subset - I don't understand the few examples of programmatic selection that I have seen and a further complication is I need this subset to include nodes from all blocks in my MultiBlockDataset

2.      From this subset, how do I find the correct index into the original Points array for each point in my subset, so that I can assign this new variable to the correct nodes.   I'm sure there's something simple like a GlobalNodeID or something but I don't know how to do that.

Anyone got a good example?

Thanks

Dennis
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From utkarsh.ayachit at kitware.com  Fri Feb  5 09:59:58 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Fri, 5 Feb 2016 09:59:58 -0500
Subject: [Paraview] ANN: ParaView 5.0.1 coming soon
Message-ID: <CADHSJjAyd-_aqQ_jC2wJjH7M0fVg2VOFMNahm=2s0nfNPX7S=w@mail.gmail.com>

Folks,

Just wanted to let everyone know that we're working on a small patch
release of ParaView. For list of bug fixed/targeted for this patch release
is:

http://www.paraview.org/Bug/view_all_bug_page.php?filter=107037

The release should happen in month of Feb.

Utkarsh
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From garcfd at gmail.com  Fri Feb  5 12:41:38 2016
From: garcfd at gmail.com (Richardson CFD)
Date: Fri, 5 Feb 2016 17:41:38 +0000
Subject: [Paraview] mapping scalars onto surface geometry
Message-ID: <CA+Y385yfwRPiqFJuM=u9mJV+GQXni=b-Zjvr4pvMG+hYWpJsKA@mail.gmail.com>

How do you map a scalar field onto a surface geometry (STL file) please?

I have a structured 3d array of values such as velocity, density,
temperature etc...
and I want to map that onto a surface geometry, such as a motorbike for
example.

I have tried the "Resample with Dataset" method,  (input=scalar field,
source=surface geometry) but I'm just getting a null field (zeros) for
whichever scalar I then select to display on the surface.

Thanks UFO-CFD
<https://www.avast.com/sig-email> This email has been sent from a
virus-free computer protected by Avast.
www.avast.com <https://www.avast.com/sig-email>
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From kmorel at sandia.gov  Fri Feb  5 12:48:04 2016
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Fri, 5 Feb 2016 17:48:04 +0000
Subject: [Paraview] [EXTERNAL]  mapping scalars onto surface geometry
In-Reply-To: <CA+Y385yfwRPiqFJuM=u9mJV+GQXni=b-Zjvr4pvMG+hYWpJsKA@mail.gmail.com>
References: <CA+Y385yfwRPiqFJuM=u9mJV+GQXni=b-Zjvr4pvMG+hYWpJsKA@mail.gmail.com>
Message-ID: <D2DA2DDC.2C846%kmorel@sandia.gov>

That should work. Is it possible that the physical space of the two geometries do not overlap? Go to the information panel and look at the Bounds for the scalar field and the surface geometry. The bounds should overlap. If they do not, then you can use the Transform filter to move/scale one or both so that they are arranged in the same space.

-Ken


From: ParaView <paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>> on behalf of Richardson CFD <garcfd at gmail.com<mailto:garcfd at gmail.com>>
Date: Friday, February 5, 2016 at 10:41 AM
To: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] [Paraview] mapping scalars onto surface geometry

How do you map a scalar field onto a surface geometry (STL file) please?

I have a structured 3d array of values such as velocity, density, temperature etc...
and I want to map that onto a surface geometry, such as a motorbike for example.

I have tried the "Resample with Dataset" method,  (input=scalar field,  source=surface geometry) but I'm just getting a null field (zeros) for whichever scalar I then select to display on the surface.

Thanks UFO-CFD
[https://ipmcdn.avast.com/images/logo-avast-v1.png]<https://www.avast.com/sig-email>    This email has been sent from a virus-free computer protected by Avast.
www.avast.com<https://www.avast.com/sig-email>
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From rao at lanl.gov  Fri Feb  5 12:33:19 2016
From: rao at lanl.gov (Rao Garimella)
Date: Fri, 5 Feb 2016 10:33:19 -0700
Subject: [Paraview] Coloring parallel Exodus II meshes by file/Processor ID
Message-ID: <56B4DCDF.2000103@lanl.gov>

Hi

I tried looking for this in the archives but did not find anything relevant.

After importing a distributed mesh from the Exodus II/Nemesis I format
into paraview, how can I ask it to color the elements based on the
file/processor ID that they were read in from?

Thanks
Rao

From andy.bauer at kitware.com  Fri Feb  5 14:27:44 2016
From: andy.bauer at kitware.com (Andy Bauer)
Date: Fri, 5 Feb 2016 14:27:44 -0500
Subject: [Paraview] Coloring parallel Exodus II meshes by file/Processor
	ID
In-Reply-To: <56B4DCDF.2000103@lanl.gov>
References: <56B4DCDF.2000103@lanl.gov>
Message-ID: <CAMaOp+EPryWvGdeBPnBCXj9dLsbVgA_BGn8eNu-zdzr5H_UCKw@mail.gmail.com>

HI Rao,

The Process Id Scalars creates a field that shows the current partitioning
of the grid for pvserver. That may be what you're looking for. If you're
looking for the grid partitioning that was used for the simulation, this
information would need to be communicated in the ExodusII file itself.
Depending on how things are written out, there should be a block ID
available though that you give you this information for certain simulation
outputs.

Please let me know if this isn't what you're looking for and we can try and
see how to get it.

Best,
Andy

On Fri, Feb 5, 2016 at 12:33 PM, Rao Garimella <rao at lanl.gov> wrote:

> Hi
>
> I tried looking for this in the archives but did not find anything
> relevant.
>
> After importing a distributed mesh from the Exodus II/Nemesis I format
> into paraview, how can I ask it to color the elements based on the
> file/processor ID that they were read in from?
>
> Thanks
> Rao
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From martin.huartee at gmail.com  Fri Feb  5 14:28:23 2016
From: martin.huartee at gmail.com (Martin Huarte Espinosa)
Date: Fri, 5 Feb 2016 13:28:23 -0600
Subject: [Paraview] Able/unable to read chombo files at
	localhost/over-a-forward-ssh-tunnel
Message-ID: <CABY5g+scOzDuOTAFf7muwwq_PjF_6TRrad99awbPUtvh=fSowQ@mail.gmail.com>

Dear Paraview enthusiasts: good day. Using paraview 4.3.1 over a parallel,
forward, shh, tunnel connection, I am unable to use the Chombo reader.
However, over a conventional, local, single processor session I am able to
do so. Is this because a chombo reader has not been installed at the
remotehost? If not, any hints will be appreciated.

Thank you.

My best, Mart?n


*Mart?n Huarte-Espinosa, Ph.D.*
*Physicist  -  Expert Numerical Modeler and Code Developer - High
Performance Computing Research Specialist*
* <http://linkedin.com/pub/martin-huarte-espinosa/59/6b7/13a>
<https://twitter.com/mhuartee>*
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From kmorel at sandia.gov  Fri Feb  5 14:52:00 2016
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Fri, 5 Feb 2016 19:52:00 +0000
Subject: [Paraview] [EXTERNAL]  mapping scalars onto surface geometry
In-Reply-To: <CA+Y385wi80CBPmWN2AZ_eyJ4gnk5B3MA_YTL36Fdu_2qaoUZHA@mail.gmail.com>
References: <CA+Y385yfwRPiqFJuM=u9mJV+GQXni=b-Zjvr4pvMG+hYWpJsKA@mail.gmail.com>
 <D2DA2DDC.2C846%kmorel@sandia.gov>
 <CA+Y385wi80CBPmWN2AZ_eyJ4gnk5B3MA_YTL36Fdu_2qaoUZHA@mail.gmail.com>
Message-ID: <D2DA4996.2C85C%kmorel@sandia.gov>

(Responding back to the group.)

Well, that's strange. That should work.

I notice that you originally said your scalars are in a structured grid, but the top of your data file says it is an unstructured grid. An unstructured grid can represent anything, so is there a possibility it does not represent the solid geometry you think it does? If you put a slice plane through it, does the slice and the fields on the slice look correct? Does it help if you run the "Clean to Grid" filter on the scalars?

I'm really just guessing at potential problems here. It would help if you could send some example data that exemplifies the problem.

-Ken


From: Richardson CFD <garcfd at gmail.com<mailto:garcfd at gmail.com>>
Date: Friday, February 5, 2016 at 11:29 AM
To: Kenneth Moreland <kmorel at sandia.gov<mailto:kmorel at sandia.gov>>
Subject: Re: [EXTERNAL] [Paraview] mapping scalars onto surface geometry


Thanks - yes the data-sets definitely overlap.  The STL surface (blue) is well within the scalar flow field (red).  The scalars (in the flow field) are just imported as a vtk file:
ASCII
DATASET UNSTRUCTURED_GRID

[Inline image 1]

On Fri, Feb 5, 2016 at 5:48 PM, Moreland, Kenneth <kmorel at sandia.gov<mailto:kmorel at sandia.gov>> wrote:
That should work. Is it possible that the physical space of the two geometries do not overlap? Go to the information panel and look at the Bounds for the scalar field and the surface geometry. The bounds should overlap. If they do not, then you can use the Transform filter to move/scale one or both so that they are arranged in the same space.

-Ken


From: ParaView <paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>> on behalf of Richardson CFD <garcfd at gmail.com<mailto:garcfd at gmail.com>>
Date: Friday, February 5, 2016 at 10:41 AM
To: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] [Paraview] mapping scalars onto surface geometry

How do you map a scalar field onto a surface geometry (STL file) please?

I have a structured 3d array of values such as velocity, density, temperature etc...
and I want to map that onto a surface geometry, such as a motorbike for example.

I have tried the "Resample with Dataset" method,  (input=scalar field,  source=surface geometry) but I'm just getting a null field (zeros) for whichever scalar I then select to display on the surface.

Thanks UFO-CFD
[https://ipmcdn.avast.com/images/logo-avast-v1.png]<https://www.avast.com/sig-email>    This email has been sent from a virus-free computer protected by Avast.
www.avast.com<https://www.avast.com/sig-email>

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From rao at lanl.gov  Fri Feb  5 14:55:55 2016
From: rao at lanl.gov (Rao Garimella)
Date: Fri, 5 Feb 2016 12:55:55 -0700
Subject: [Paraview] Coloring parallel Exodus II meshes by file/Processor
 ID
In-Reply-To: <CAMaOp+EPryWvGdeBPnBCXj9dLsbVgA_BGn8eNu-zdzr5H_UCKw@mail.gmail.com>
References: <56B4DCDF.2000103@lanl.gov>
 <CAMaOp+EPryWvGdeBPnBCXj9dLsbVgA_BGn8eNu-zdzr5H_UCKw@mail.gmail.com>
Message-ID: <56B4FE4B.7040607@lanl.gov>

I did not find the Process ID field but coloring by Pedigree Element ID
seems to have the same effect

Rao

On 02/05/16 12:27, Andy Bauer wrote:
> HI Rao,
>
> The Process Id Scalars creates a field that shows the current
> partitioning of the grid for pvserver. That may be what you're looking
> for. If you're looking for the grid partitioning that was used for the
> simulation, this information would need to be communicated in the
> ExodusII file itself. Depending on how things are written out, there
> should be a block ID available though that you give you this
> information for certain simulation outputs.
>
> Please let me know if this isn't what you're looking for and we can
> try and see how to get it.
>
> Best,
> Andy
>
> On Fri, Feb 5, 2016 at 12:33 PM, Rao Garimella <rao at lanl.gov
> <mailto:rao at lanl.gov>> wrote:
>
>     Hi
>
>     I tried looking for this in the archives but did not find anything
>     relevant.
>
>     After importing a distributed mesh from the Exodus II/Nemesis I format
>     into paraview, how can I ask it to color the elements based on the
>     file/processor ID that they were read in from?
>
>     Thanks
>     Rao
>     _______________________________________________
>     Powered by www.kitware.com <http://www.kitware.com>
>
>     Visit other Kitware open-source projects at
>     http://www.kitware.com/opensource/opensource.html
>
>     Please keep messages on-topic and check the ParaView Wiki at:
>     http://paraview.org/Wiki/ParaView
>
>     Search the list archives at: http://markmail.org/search/?q=ParaView
>
>     Follow this link to subscribe/unsubscribe:
>     http://public.kitware.com/mailman/listinfo/paraview
>
>

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From kmorel at sandia.gov  Fri Feb  5 14:56:47 2016
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Fri, 5 Feb 2016 19:56:47 +0000
Subject: [Paraview] Coloring parallel Exodus II meshes by file/Processor
 ID
Message-ID: <D2DA4BD7.2C86F%kmorel@sandia.gov>

Rao,

I think you were asking how to get the file ID representing the processor holding the piece in the simulation whereas Andy's instructions tell you the process ID that the parts got loaded into the visualization.

To get the file ID, go to the properties panel for the Exodus reader and find the property labeled "Generate File Id Array." (The easiest way to find it is to type "generate" in the search bar at the top of the properties panel.) Turn on that checkbox and ParaView will generate a field named "FileId". Just color by that field and you are good to go.

-Ken

From: ParaView <paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>> on behalf of Andy Bauer <andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>>
Date: Friday, February 5, 2016 at 12:27 PM
To: "Garimella, Rao Veerabhadra (LANL)" <rao at lanl.gov<mailto:rao at lanl.gov>>
Cc: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] Re: [Paraview] Coloring parallel Exodus II meshes by file/Processor ID

HI Rao,

The Process Id Scalars creates a field that shows the current partitioning of the grid for pvserver. That may be what you're looking for. If you're looking for the grid partitioning that was used for the simulation, this information would need to be communicated in the ExodusII file itself. Depending on how things are written out, there should be a block ID available though that you give you this information for certain simulation outputs.

Please let me know if this isn't what you're looking for and we can try and see how to get it.

Best,
Andy

On Fri, Feb 5, 2016 at 12:33 PM, Rao Garimella <rao at lanl.gov<mailto:rao at lanl.gov>> wrote:
Hi

I tried looking for this in the archives but did not find anything relevant.

After importing a distributed mesh from the Exodus II/Nemesis I format
into paraview, how can I ask it to color the elements based on the
file/processor ID that they were read in from?

Thanks
Rao
_______________________________________________
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Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html

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From andy.bauer at kitware.com  Fri Feb  5 15:01:33 2016
From: andy.bauer at kitware.com (Andy Bauer)
Date: Fri, 5 Feb 2016 15:01:33 -0500
Subject: [Paraview] Coloring parallel Exodus II meshes by file/Processor
	ID
In-Reply-To: <D2DA4BD7.2C86F%kmorel@sandia.gov>
References: <D2DA4BD7.2C86F%kmorel@sandia.gov>
Message-ID: <CAMaOp+H3VV8p4_Kx3iGvpyDTSAgyE2Uuv_=efgz3A33z1vMqMw@mail.gmail.com>

Yes, I did indeed interpret the question wrong and Ken probably gave you a
proper answer.

To finish off my question, the Process ID Scalars filter should only be
shown in the GUI if you're running the ParaView server (pvserver) in
parallel. Otherwise it's a very boring filter that just wastes compute
cycles and memory.

On Fri, Feb 5, 2016 at 2:56 PM, Moreland, Kenneth <kmorel at sandia.gov> wrote:

> Rao,
>
> I think you were asking how to get the file ID representing the processor
> holding the piece in the simulation whereas Andy's instructions tell you
> the process ID that the parts got loaded into the visualization.
>
> To get the file ID, go to the properties panel for the Exodus reader and
> find the property labeled "Generate File Id Array." (The easiest way to
> find it is to type "generate" in the search bar at the top of the
> properties panel.) Turn on that checkbox and ParaView will generate a field
> named "FileId". Just color by that field and you are good to go.
>
> -Ken
>
> From: ParaView <paraview-bounces at paraview.org> on behalf of Andy Bauer <
> andy.bauer at kitware.com>
> Date: Friday, February 5, 2016 at 12:27 PM
> To: "Garimella, Rao Veerabhadra (LANL)" <rao at lanl.gov>
> Cc: "paraview at paraview.org" <paraview at paraview.org>
> Subject: [EXTERNAL] Re: [Paraview] Coloring parallel Exodus II meshes by
> file/Processor ID
>
> HI Rao,
>
> The Process Id Scalars creates a field that shows the current partitioning
> of the grid for pvserver. That may be what you're looking for. If you're
> looking for the grid partitioning that was used for the simulation, this
> information would need to be communicated in the ExodusII file itself.
> Depending on how things are written out, there should be a block ID
> available though that you give you this information for certain simulation
> outputs.
>
> Please let me know if this isn't what you're looking for and we can try
> and see how to get it.
>
> Best,
> Andy
>
> On Fri, Feb 5, 2016 at 12:33 PM, Rao Garimella <rao at lanl.gov> wrote:
>
>> Hi
>>
>> I tried looking for this in the archives but did not find anything
>> relevant.
>>
>> After importing a distributed mesh from the Exodus II/Nemesis I format
>> into paraview, how can I ask it to color the elements based on the
>> file/processor ID that they were read in from?
>>
>> Thanks
>> Rao
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>
>
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From rao at lanl.gov  Fri Feb  5 15:03:48 2016
From: rao at lanl.gov (Rao Garimella)
Date: Fri, 5 Feb 2016 13:03:48 -0700
Subject: [Paraview] Coloring parallel Exodus II meshes by file/Processor
 ID
In-Reply-To: <D2DA4BD7.2C86F%kmorel@sandia.gov>
References: <D2DA4BD7.2C86F%kmorel@sandia.gov>
Message-ID: <56B50024.6050908@lanl.gov>

Hmm. I cannot find that property either by searching or by visual
inspection. Perhaps its only in a newer version of Paraview? I am using
4.3.1

Rao

On 02/05/16 12:56, Moreland, Kenneth wrote:
> Rao,
>
> I think you were asking how to get the file ID representing the
> processor holding the piece in the simulation whereas Andy's
> instructions tell you the process ID that the parts got loaded into
> the visualization.
>
> To get the file ID, go to the properties panel for the Exodus reader
> and find the property labeled "Generate File Id Array." (The easiest
> way to find it is to type "generate" in the search bar at the top of
> the properties panel.) Turn on that checkbox and ParaView will
> generate a field named "FileId". Just color by that field and you are
> good to go.
>
> -Ken
>
> From: ParaView <paraview-bounces at paraview.org
> <mailto:paraview-bounces at paraview.org>> on behalf of Andy Bauer
> <andy.bauer at kitware.com <mailto:andy.bauer at kitware.com>>
> Date: Friday, February 5, 2016 at 12:27 PM
> To: "Garimella, Rao Veerabhadra (LANL)" <rao at lanl.gov
> <mailto:rao at lanl.gov>>
> Cc: "paraview at paraview.org <mailto:paraview at paraview.org>"
> <paraview at paraview.org <mailto:paraview at paraview.org>>
> Subject: [EXTERNAL] Re: [Paraview] Coloring parallel Exodus II meshes
> by file/Processor ID
>
> HI Rao,
>
> The Process Id Scalars creates a field that shows the current
> partitioning of the grid for pvserver. That may be what you're looking
> for. If you're looking for the grid partitioning that was used for the
> simulation, this information would need to be communicated in the
> ExodusII file itself. Depending on how things are written out, there
> should be a block ID available though that you give you this
> information for certain simulation outputs.
>
> Please let me know if this isn't what you're looking for and we can
> try and see how to get it.
>
> Best,
> Andy
>
> On Fri, Feb 5, 2016 at 12:33 PM, Rao Garimella <rao at lanl.gov
> <mailto:rao at lanl.gov>> wrote:
>
>     Hi
>
>     I tried looking for this in the archives but did not find anything
>     relevant.
>
>     After importing a distributed mesh from the Exodus II/Nemesis I format
>     into paraview, how can I ask it to color the elements based on the
>     file/processor ID that they were read in from?
>
>     Thanks
>     Rao
>     _______________________________________________
>     Powered by www.kitware.com <http://www.kitware.com>
>
>     Visit other Kitware open-source projects at
>     http://www.kitware.com/opensource/opensource.html
>     <http://www.kitware.com/opensource/opensource.html>
>
>     Please keep messages on-topic and check the ParaView Wiki at:
>     http://paraview.org/Wiki/ParaView <http://paraview.org/Wiki/ParaView>
>
>     Search the list archives at:
>     http://markmail.org/search/?q=ParaView
>     <http://markmail.org/search/?q=ParaView>
>
>     Follow this link to subscribe/unsubscribe:
>     http://public.kitware.com/mailman/listinfo/paraview
>
>

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From kmorel at sandia.gov  Fri Feb  5 15:07:46 2016
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Fri, 5 Feb 2016 20:07:46 +0000
Subject: [Paraview] Coloring parallel Exodus II meshes by file/Processor
 ID
Message-ID: <D2DA4ED1.2C87F%kmorel@sandia.gov>

It looks like this feature was introduced in ParaView 4.4. I don't see it in 4.3.

-Ken

From: Rao Garimella <rao at lanl.gov<mailto:rao at lanl.gov>>
Date: Friday, February 5, 2016 at 1:03 PM
To: Kenneth Moreland <kmorel at sandia.gov<mailto:kmorel at sandia.gov>>, Andy Bauer <andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>>
Cc: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] Re: [Paraview] Coloring parallel Exodus II meshes by file/Processor ID

Hmm. I cannot find that property either by searching or by visual inspection. Perhaps its only in a newer version of Paraview? I am using 4.3.1

Rao

On 02/05/16 12:56, Moreland, Kenneth wrote:
Rao,

I think you were asking how to get the file ID representing the processor holding the piece in the simulation whereas Andy's instructions tell you the process ID that the parts got loaded into the visualization.

To get the file ID, go to the properties panel for the Exodus reader and find the property labeled "Generate File Id Array." (The easiest way to find it is to type "generate" in the search bar at the top of the properties panel.) Turn on that checkbox and ParaView will generate a field named "FileId". Just color by that field and you are good to go.

-Ken

From: ParaView <<mailto:paraview-bounces at paraview.org>paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>> on behalf of Andy Bauer <andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>>
Date: Friday, February 5, 2016 at 12:27 PM
To: "Garimella, Rao Veerabhadra (LANL)" <rao at lanl.gov<mailto:rao at lanl.gov>>
Cc: "<mailto:paraview at paraview.org>paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] Re: [Paraview] Coloring parallel Exodus II meshes by file/Processor ID

HI Rao,

The Process Id Scalars creates a field that shows the current partitioning of the grid for pvserver. That may be what you're looking for. If you're looking for the grid partitioning that was used for the simulation, this information would need to be communicated in the ExodusII file itself. Depending on how things are written out, there should be a block ID available though that you give you this information for certain simulation outputs.

Please let me know if this isn't what you're looking for and we can try and see how to get it.

Best,
Andy

On Fri, Feb 5, 2016 at 12:33 PM, Rao Garimella <rao at lanl.gov<mailto:rao at lanl.gov>> wrote:
Hi

I tried looking for this in the archives but did not find anything relevant.

After importing a distributed mesh from the Exodus II/Nemesis I format
into paraview, how can I ask it to color the elements based on the
file/processor ID that they were read in from?

Thanks
Rao
_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>

Visit other Kitware open-source projects at <http://www.kitware.com/opensource/opensource.html> http://www.kitware.com/opensource/opensource.html

Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView

Search the list archives at: <http://markmail.org/search/?q=ParaView> http://markmail.org/search/?q=ParaView

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From rao at lanl.gov  Fri Feb  5 15:08:34 2016
From: rao at lanl.gov (Rao Garimella)
Date: Fri, 5 Feb 2016 13:08:34 -0700
Subject: [Paraview] Coloring parallel Exodus II meshes by file/Processor
 ID
In-Reply-To: <D2DA4ED1.2C87F%kmorel@sandia.gov>
References: <D2DA4ED1.2C87F%kmorel@sandia.gov>
Message-ID: <56B50142.7010604@lanl.gov>

OK. Thanks. I will try to get the latest one. Appreciate your help!

On 02/05/16 13:07, Moreland, Kenneth wrote:
> It looks like this feature was introduced in ParaView 4.4. I don't see
> it in 4.3.
>
> -Ken
>
> From: Rao Garimella <rao at lanl.gov <mailto:rao at lanl.gov>>
> Date: Friday, February 5, 2016 at 1:03 PM
> To: Kenneth Moreland <kmorel at sandia.gov <mailto:kmorel at sandia.gov>>,
> Andy Bauer <andy.bauer at kitware.com <mailto:andy.bauer at kitware.com>>
> Cc: "paraview at paraview.org <mailto:paraview at paraview.org>"
> <paraview at paraview.org <mailto:paraview at paraview.org>>
> Subject: [EXTERNAL] Re: [Paraview] Coloring parallel Exodus II meshes
> by file/Processor ID
>
> Hmm. I cannot find that property either by searching or by visual
> inspection. Perhaps its only in a newer version of Paraview? I am
> using 4.3.1
>
> Rao
>
> On 02/05/16 12:56, Moreland, Kenneth wrote:
>> Rao,
>>
>> I think you were asking how to get the file ID representing the
>> processor holding the piece in the simulation whereas Andy's
>> instructions tell you the process ID that the parts got loaded into
>> the visualization.
>>
>> To get the file ID, go to the properties panel for the Exodus reader
>> and find the property labeled "Generate File Id Array." (The easiest
>> way to find it is to type "generate" in the search bar at the top of
>> the properties panel.) Turn on that checkbox and ParaView will
>> generate a field named "FileId". Just color by that field and you are
>> good to go.
>>
>> -Ken
>>
>> From: ParaView <paraview-bounces at paraview.org> on behalf of Andy
>> Bauer <andy.bauer at kitware.com <mailto:andy.bauer at kitware.com>>
>> Date: Friday, February 5, 2016 at 12:27 PM
>> To: "Garimella, Rao Veerabhadra (LANL)" <rao at lanl.gov
>> <mailto:rao at lanl.gov>>
>> Cc: "paraview at paraview.org" <paraview at paraview.org
>> <mailto:paraview at paraview.org>>
>> Subject: [EXTERNAL] Re: [Paraview] Coloring parallel Exodus II meshes
>> by file/Processor ID
>>
>> HI Rao,
>>
>> The Process Id Scalars creates a field that shows the current
>> partitioning of the grid for pvserver. That may be what you're
>> looking for. If you're looking for the grid partitioning that was
>> used for the simulation, this information would need to be
>> communicated in the ExodusII file itself. Depending on how things are
>> written out, there should be a block ID available though that you
>> give you this information for certain simulation outputs.
>>
>> Please let me know if this isn't what you're looking for and we can
>> try and see how to get it.
>>
>> Best,
>> Andy
>>
>> On Fri, Feb 5, 2016 at 12:33 PM, Rao Garimella <rao at lanl.gov
>> <mailto:rao at lanl.gov>> wrote:
>>
>>     Hi
>>
>>     I tried looking for this in the archives but did not find
>>     anything relevant.
>>
>>     After importing a distributed mesh from the Exodus II/Nemesis I
>>     format
>>     into paraview, how can I ask it to color the elements based on the
>>     file/processor ID that they were read in from?
>>
>>     Thanks
>>     Rao
>>     _______________________________________________
>>     Powered by www.kitware.com <http://www.kitware.com>
>>
>>     Visit other Kitware open-source projects at
>>     <http://www.kitware.com/opensource/opensource.html>http://www.kitware.com/opensource/opensource.html
>>
>>     Please keep messages on-topic and check the ParaView Wiki at:
>>     http://paraview.org/Wiki/ParaView <http://paraview.org/Wiki/ParaView>
>>
>>     Search the list archives at:
>>     <http://markmail.org/search/?q=ParaView>http://markmail.org/search/?q=ParaView
>>
>>     Follow this link to subscribe/unsubscribe:
>>     http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>

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From praveen.gagrai12 at gmail.com  Sat Feb  6 02:28:53 2016
From: praveen.gagrai12 at gmail.com (praveen gagrai)
Date: Sat, 6 Feb 2016 12:58:53 +0530
Subject: [Paraview] to see a deform microstructure
Message-ID: <CAL1c=f5ga63RbFHJQOxxiw74NqLVpAw-7qrNOPM-t3xbt9Q==Q@mail.gmail.com>

I have deformed the workpiece in abaqus and I want to visualize  deformed
structure in paraview.......so how I will export a data from abaqus to
paraview.
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From garcfd at gmail.com  Sat Feb  6 07:54:28 2016
From: garcfd at gmail.com (Richardson CFD)
Date: Sat, 6 Feb 2016 12:54:28 +0000
Subject: [Paraview] mapping scalars onto surface geometry
Message-ID: <CA+Y385xsmUtXyDNDd1+gcoCE_EEURycQX=3i6isa_VG=dMLk4g@mail.gmail.com>

Kenneth,

I have made two files here available for download (sphere.stl and
scalars.vtk).

https://drive.google.com/file/d/0B4bNbYR3XwvQVlBZNlVBX0RXSkU/view?usp=sharing

https://drive.google.com/file/d/0B4bNbYR3XwvQTkJxRDhLb0MxZGc/view?usp=sharing

I hope you can give these a try using "Resample with Dataset" to see what
the problem is.

Regards Giles.
<https://www.avast.com/sig-email> This email has been sent from a
virus-free computer protected by Avast.
www.avast.com <https://www.avast.com/sig-email>
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From samuelkey at bresnan.net  Sat Feb  6 18:41:46 2016
From: samuelkey at bresnan.net (Samuel Key)
Date: Sat, 6 Feb 2016 16:41:46 -0700
Subject: [Paraview] [EXTERNAL] mapping scalars onto surface geometry
In-Reply-To: <D2DA4996.2C85C%kmorel@sandia.gov>
References: <CA+Y385yfwRPiqFJuM=u9mJV+GQXni=b-Zjvr4pvMG+hYWpJsKA@mail.gmail.com>
 <D2DA2DDC.2C846%kmorel@sandia.gov>
 <CA+Y385wi80CBPmWN2AZ_eyJ4gnk5B3MA_YTL36Fdu_2qaoUZHA@mail.gmail.com>
 <D2DA4996.2C85C%kmorel@sandia.gov>
Message-ID: <56B684BA.1040705@bresnan.net>

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From kmorel at sandia.gov  Sun Feb  7 01:31:19 2016
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Sun, 7 Feb 2016 06:31:19 +0000
Subject: [Paraview] mapping scalars onto surface geometry
Message-ID: <D2DC2D73.24E2E%kmorel@sandia.gov>

Giles,

I think I've figured out your problem. The scalars data you sent me is an unstructured grid with "voxel"-type cells. One of my least favorite features of VTK is that there is a distinction between a box in an unstructured grid (called a hexahedra) and a box in a data set with structured grid (called a voxel). These two cells are essentially the same shape, but the order of the points is different.

The reason why I dislike this feature is that it is technically allowable to put voxel cells in an unstructured grid. However, this fouls up lots of filters that don't check for this corner case. Apparently the probe filter, which is the underlying filter for resample with dataset, is one of the filters broken for voxels. (Unless there is something else about this dataset that I am missing.) I submitted a bug about this (http://www.paraview.org/Bug/view.php?id=15982).

The most expedient way around this problem is to run the tetrahedralize filter on the scalars. That will convert the voxels to tetrahedra correctly, and the probe filter has no problem on that data type. The interpolation will be slightly different but close. Overall a better solution is to save your data as image data rather than convert it to an unstructured grid. The file will be smaller and the interpolation should happen correctly.

-Ken

From: Richardson CFD <garcfd at gmail.com<mailto:garcfd at gmail.com>>
Date: Saturday, February 6, 2016 at 5:54 AM
To: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>, Kenneth Moreland <kmorel at sandia.gov<mailto:kmorel at sandia.gov>>
Subject: [EXTERNAL] mapping scalars onto surface geometry

Kenneth,

I have made two files here available for download (sphere.stl and scalars.vtk).

https://drive.google.com/file/d/0B4bNbYR3XwvQVlBZNlVBX0RXSkU/view?usp=sharing

https://drive.google.com/file/d/0B4bNbYR3XwvQTkJxRDhLb0MxZGc/view?usp=sharing

I hope you can give these a try using "Resample with Dataset" to see what the problem is.

Regards Giles.
[https://ipmcdn.avast.com/images/logo-avast-v1.png]<https://www.avast.com/sig-email>    This email has been sent from a virus-free computer protected by Avast.
www.avast.com<https://www.avast.com/sig-email>
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From garcfd at gmail.com  Sun Feb  7 05:15:11 2016
From: garcfd at gmail.com (Richardson CFD)
Date: Sun, 7 Feb 2016 10:15:11 +0000
Subject: [Paraview] mapping scalars onto surface geometry
In-Reply-To: <D2DC2D73.24E2E%kmorel@sandia.gov>
References: <D2DC2D73.24E2E%kmorel@sandia.gov>
Message-ID: <CA+Y385yNXbK1b5xCtCVBH0XFJ0EG2vBhQCZNxjqV3P7S54AsLw@mail.gmail.com>

Kenneth, wonderful - that's done the trick (see attached).
A quick and simple solution!

Whats the difference between an image file (and the unstructured data file
that I have created)?

Thanks very much, Giles.

On Sun, Feb 7, 2016 at 6:31 AM, Moreland, Kenneth <kmorel at sandia.gov> wrote:

> Giles,
>
> I think I've figured out your problem. The scalars data you sent me is an
> unstructured grid with "voxel"-type cells. One of my least favorite
> features of VTK is that there is a distinction between a box in an
> unstructured grid (called a hexahedra) and a box in a data set with
> structured grid (called a voxel). These two cells are essentially the same
> shape, but the order of the points is different.
>
> The reason why I dislike this feature is that it is technically allowable
> to put voxel cells in an unstructured grid. However, this fouls up lots of
> filters that don't check for this corner case. Apparently the probe filter,
> which is the underlying filter for resample with dataset, is one of the
> filters broken for voxels. (Unless there is something else about this
> dataset that I am missing.) I submitted a bug about this (
> http://www.paraview.org/Bug/view.php?id=15982).
>
> The most expedient way around this problem is to run the tetrahedralize
> filter on the scalars. That will convert the voxels to tetrahedra
> correctly, and the probe filter has no problem on that data type. The
> interpolation will be slightly different but close. Overall a better
> solution is to save your data as image data rather than convert it to an
> unstructured grid. The file will be smaller and the interpolation should
> happen correctly.
>
> -Ken
>
> From: Richardson CFD <garcfd at gmail.com>
> Date: Saturday, February 6, 2016 at 5:54 AM
> To: "paraview at paraview.org" <paraview at paraview.org>, Kenneth Moreland <
> kmorel at sandia.gov>
> Subject: [EXTERNAL] mapping scalars onto surface geometry
>
> Kenneth,
>
> I have made two files here available for download (sphere.stl and
> scalars.vtk).
>
>
> https://drive.google.com/file/d/0B4bNbYR3XwvQVlBZNlVBX0RXSkU/view?usp=sharing
>
>
> https://drive.google.com/file/d/0B4bNbYR3XwvQTkJxRDhLb0MxZGc/view?usp=sharing
>
> I hope you can give these a try using "Resample with Dataset" to see what
> the problem is.
>
> Regards Giles.
> <https://www.avast.com/sig-email> This email has been sent from a
> virus-free computer protected by Avast.
> www.avast.com <https://www.avast.com/sig-email>
> <#760742403_DDB4FAA8-2DD7-40BB-A1B8-4E2AA1F9FDF2>
>
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From neilsrini at gmail.com  Sun Feb  7 08:43:54 2016
From: neilsrini at gmail.com (Neil Srinivasan)
Date: Sun, 7 Feb 2016 13:43:54 +0000
Subject: [Paraview] mapping scalars onto surface geometry
In-Reply-To: <CA+Y385yNXbK1b5xCtCVBH0XFJ0EG2vBhQCZNxjqV3P7S54AsLw@mail.gmail.com>
References: <D2DC2D73.24E2E%kmorel@sandia.gov>
 <CA+Y385yNXbK1b5xCtCVBH0XFJ0EG2vBhQCZNxjqV3P7S54AsLw@mail.gmail.com>
Message-ID: <4F51084C-77B5-404D-8620-06804EFD1A5B@gmail.com>

Hi I am new to Paraview

Can you help

I have data in a CSV spreadsheet. 


It contains the xyz point coordinates of a 3D shape (20,000+ nodes). 

The file also contains the triangulation coordinates in 3 separate columns for these nodes (40000 + triangulations). These create the faces of the mesh

I can work out how to plot the points, using 

Filter?Table to points. 


How do I plot the faces?
Do the 3 columns need to be turned into an array?


And how do I colour the faces or contour them by another value (called "bi" in the spreadsheet)



here is an example of the spreadsheet

nn = node number

the 3d coordinates of the points are x, y, z

and the faces of the mesh are specified by (XYZ)

I WISH TO PLOT Points (x, y, x) , draw faces (XYZ) colour by ?bi"



in matlab

it would be


trisurf(Tri,X,Y,Z,C) 


where Tri = array(XYX)

X,Y,Z = (x, y, z)

c= "bi"





nn	x	y	z	X	Y	Z	uni	bi
0	39.527	28.202	160.219	3435	19658	2764	3.86942	0.74871
1	70.804	-2.966	157.578	3161	17204	9466	6.64361	0.78373
2	48.982	-25.674	109.022	18424	17467	16955	5.02491	1.0451
3	83.514	-9.096	120.988	13600	19721	2669	4.47977	0.9348
4	-16.04	-39.749	188.467	1564	10099	10091	1.90873	0.73286
5	74.526	-3.096	174.347	21598	19018	21205	8.4263	0.70594
6	54.93	-56.347	151.496	21283	11341	18399	7.53334	2.17128
7	56.936	-20.131	186.177	1171	2723	20833	7.16118	1.44875
8	-14.627	-47.1	162.185	51	15729	15865	2.13939	0.70887
9	38.207	-59.201	147.993	9331	5851	9106	5.83457	4.32971
10	50.645	-32.04	110.418	310	3513	9121	5.3741	1.14543

Neil Srinivasan
iPhone 

> On 7 Feb 2016, at 10:15 a.m., Richardson CFD <garcfd at gmail.com> wrote:
> 
> Kenneth, wonderful - that's done the trick (see attached).
> A quick and simple solution! 
> 
> Whats the difference between an image file (and the unstructured data file that I have created)?
> 
> Thanks very much, Giles.
> 
>> On Sun, Feb 7, 2016 at 6:31 AM, Moreland, Kenneth <kmorel at sandia.gov> wrote:
>> Giles,
>> 
>> I think I've figured out your problem. The scalars data you sent me is an unstructured grid with "voxel"-type cells. One of my least favorite features of VTK is that there is a distinction between a box in an unstructured grid (called a hexahedra) and a box in a data set with structured grid (called a voxel). These two cells are essentially the same shape, but the order of the points is different.
>> 
>> The reason why I dislike this feature is that it is technically allowable to put voxel cells in an unstructured grid. However, this fouls up lots of filters that don't check for this corner case. Apparently the probe filter, which is the underlying filter for resample with dataset, is one of the filters broken for voxels. (Unless there is something else about this dataset that I am missing.) I submitted a bug about this (http://www.paraview.org/Bug/view.php?id=15982).
>> 
>> The most expedient way around this problem is to run the tetrahedralize filter on the scalars. That will convert the voxels to tetrahedra correctly, and the probe filter has no problem on that data type. The interpolation will be slightly different but close. Overall a better solution is to save your data as image data rather than convert it to an unstructured grid. The file will be smaller and the interpolation should happen correctly.
>> 
>> -Ken
>> 
>> From: Richardson CFD <garcfd at gmail.com>
>> Date: Saturday, February 6, 2016 at 5:54 AM
>> To: "paraview at paraview.org" <paraview at paraview.org>, Kenneth Moreland <kmorel at sandia.gov>
>> Subject: [EXTERNAL] mapping scalars onto surface geometry
>> 
>> Kenneth,
>> 
>> I have made two files here available for download (sphere.stl and scalars.vtk).
>> 
>> https://drive.google.com/file/d/0B4bNbYR3XwvQVlBZNlVBX0RXSkU/view?usp=sharing
>> 
>> https://drive.google.com/file/d/0B4bNbYR3XwvQTkJxRDhLb0MxZGc/view?usp=sharing
>> 
>> I hope you can give these a try using "Resample with Dataset" to see what the problem is.
>> 
>> Regards Giles.
>>  	This email has been sent from a virus-free computer protected by Avast. 
>> www.avast.com
> 
> <Capture2.PNG>
> _______________________________________________
> Powered by www.kitware.com
> 
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
> 
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
> 
> Search the list archives at: http://markmail.org/search/?q=ParaView
> 
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
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From alessandro at ipgp.fr  Mon Feb  8 08:58:09 2016
From: alessandro at ipgp.fr (alessandro)
Date: Mon, 08 Feb 2016 14:58:09 +0100
Subject: [Paraview] =?utf-8?q?plate=5Fboundary_file_to_vtk_in_2d?=
Message-ID: <82747059c7ab0a845baaa90f9e755fb5@imap.ipgp.fr>


Good morning,

Hi would like to ask how obtain a vtk file from xy input file like 
plate_boundary.gmt, example below, but to plot just a 2d plate lines.

plate_boundary.gmt:

AF-AN                      Mueller et al. [1987]
  -4.37900E-01,-5.48518E+01
  -3.88257E-02,-5.46772E+01
  +4.43182E-01,-5.44512E+01
  +9.64534E-01,-5.48322E+01
  +1.69481E+00,-5.43990E+01
  +2.35975E+00,-5.40374E+01
  +3.02542E+00,-5.36507E+01
  +3.36894E+00,-5.38341E+01
  +3.95638E+00,-5.41267E+01
  +4.41458E+00,-5.44303E+01
  +4.82661E+00,-5.41616E+01
  +5.08372E+00,-5.43093E+01
  +5.49469E+00,-5.45429E+01
  +6.18373E+00,-5.41145E+01
  +6.62540E+00,-5.38142E+01
  +7.23729E+00,-5.41012E+01
  +7.77235E+00,-5.43960E+01
*** end of line segment ***
AF-AN                      by Peter Bird, October 2001
  +7.77235E+00,-5.43960E+01
  +8.28834E+00,-5.40326E+01
  +8.79876E+00,-5.36680E+01
  +9.42869E+00,-5.32326E+01
  +9.99306E+00,-5.27923E+01
  +1.05424E+01,-5.30655E+01
  +1.09748E+01,-5.33320E+01
  +1.17084E+01,-5.27829E+01
  +1.22989E+01,-5.23750E+01
  +1.28951E+01,-5.19629E+01
  +1.32042E+01,-5.21410E+01
  +1.37876E+01,-5.24769E+01
  +1.44633E+01,-5.19971E+01
  +1.51124E+01,-5.23075E+01
  +1.54280E+01,-5.20836E+01
  +1.58223E+01,-5.17870E+01
  +1.69072E+01,-5.21693E+01
  +1.78063E+01,-5.24669E+01
  +1.85374E+01,-5.27343E+01
  +1.87125E+01,-5.25529E+01
  +1.99938E+01,-5.28167E+01
  +2.12504E+01,-5.29088E+01
  +2.25042E+01,-5.30512E+01
  +2.30753E+01,-5.30977E+01
  +2.30214E+01,-5.32004E+01
  +2.38862E+01,-5.33086E+01
  +2.46851E+01,-5.34215E+01
  +2.48726E+01,-5.33453E+01
*** end of line segment ***

From grothausmann.roman at mh-hannover.de  Mon Feb  8 10:31:53 2016
From: grothausmann.roman at mh-hannover.de (Grothausmann, Roman Dr.)
Date: Mon, 08 Feb 2016 16:31:53 +0100
Subject: [Paraview] Paraview Programmable Source 3D Text
In-Reply-To: <D2DA719F.1A3B%Mark.Stock@nrel.gov>
References: <593AFCE559F11049B8F268BE84170A0DC11DA4@EXCHMBX03.fed.cclrc.ac.uk>
 <56B08094.9000607@mh-hannover.de> <D2DA719F.1A3B%Mark.Stock@nrel.gov>
Message-ID: <56B8B4E9.7070701@mh-hannover.de>

Hi Mark,


Take a look at test/hkl.lst.fdatss.csv, load it in PV, apply TableToPoints and 
it will create point data of type string for hkl-label and hkl-latex. I guess a 
general way to create string arrays of other array types would be the PV python 
interface.
Best would be to have a drop-down field in the plug-in that allows selecting the 
point data to use and convert it to strings if necessary, however I have not 
found the time to implement that.

HTH
Roman

On 08/02/16 16:01, Stock, Mark wrote:
> Dr. Grothausmann,
>
> Thank you for informing the list of your 3D glyph plugin. I built ParaView
> 4.4.0 on RHEL6 with the plugin, but I don?t know what to enter in the
> ?Your String Variable? field. I?ve never seen string variables in ParaView
> before and don?t know how to create them. I?m assuming I need one to get
> any 3D annotations.
>
> Mark
>
> On 2016-02-02, 3:10 AM, "ParaView on behalf of Grothausmann, Roman Dr."
> <paraview-bounces at paraview.org on behalf of
> grothausmann.roman at mh-hannover.de> wrote:
>
>> Hi Anton,
>>
>>
>> I just stumbled over Your post, which I had not noticed till now. Sorry,
>> for that.
>> I got a plugin working that draws 3D labels:
>> https://github.com/romangrothausmann/TextGlyphs3D_PVp
>>
>> Tries (WIP) to make the labels face the cam are in:
>> https://github.com/romangrothausmann/TextGlyphs3D_PVp/tree/follow_cam
>>
>> HTH, let me know if You have any improvements.
>> Best,
>> Roman
>>
>> On 10/02/15 14:46, anton.piccardo-selg at stfc.ac.uk wrote:
>>> Hi Roman,
>>>
>>> Did you succeed to implement  a 3D Text annotation in the data set? I am
>>> currently also looking into adding this to our ParaView customization
>>> but I
>>> am a bit at a loss how this can be achieved programmatically in
>>> ParaView. If
>>> you have any hints or ideas how to tackle this, I would be very
>>> grateful to
>>> know.
>>>
>>> Many thanks and best regards,
>>>
>>> Anton
>>>
>>
>> --
>> Dr. Roman Grothausmann
>>
>> Tomographie und Digitale Bildverarbeitung
>> Tomography and Digital Image Analysis
>>
>> Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
>> Medizinische Hochschule Hannover
>> Carl-Neuberg-Str. 1
>> D-30625 Hannover
>>
>> Tel. +49 511 532-2900
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>

-- 
Dr. Roman Grothausmann

Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis

Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover

Tel. +49 511 532-2900

From dennis.schridde at uni-heidelberg.de  Mon Feb  8 11:18:02 2016
From: dennis.schridde at uni-heidelberg.de (Dennis Schridde)
Date: Mon, 08 Feb 2016 17:18:02 +0100
Subject: [Paraview]
	=?iso-8859-1?q?ParaView_5=2E0=2E0_with_Mesa_11=2E2-git?=
	=?iso-8859-1?q?_OSMesa_/_off-screen-rendering?=
In-Reply-To: <b1dedf0a-3deb-477e-a75c-f08eea1a2dd8@uni-heidelberg.de>
References: <b7c9bcc8-d006-4c10-b1e7-56894f48d7a3@uni-heidelberg.de>
 <CADHSJjDSXvMwbNeLxXkmA4x9WZSrT2e=OrPG+uK4sSeK83ge_A@mail.gmail.com>
 <b1dedf0a-3deb-477e-a75c-f08eea1a2dd8@uni-heidelberg.de>
Message-ID: <24ed5e0c-1546-4284-b015-c7c5e16e32ea@uni-heidelberg.de>

Hello again!

I just wanted to report success: I built Mesa 11.2.0-devel-24ea81a myself, 
following the example of the Fedora specfile, but using 
--enable-gallium-osmesa instead of --enable-osmesa [1]. The resulting 
library can run ParaView 5.0.0 in off-screen mode.

I reported the issue to the Fedora maintainers [2] and also to the Gentoo 
maintainers [3], as that package was suffering from the same issue.

Best regards,
Dennis

[1]: https://github.com/urzds/mesa-docker/blob/master/Dockerfile
[2]: https://bugzilla.redhat.com/show_bug.cgi?id=1305588
[3]: https://bugs.gentoo.org/show_bug.cgi?id=574070
-- 
Universit?t Heidelberg, Universit?tsrechenzentrum (URZ)
Servicebereich Future IT - Research & Education (FIRE)

Tel. +49 6221 54-4519, Fax +49 6221 54-5581
dennis.schridde at uni-heidelberg.de

http://www.urz.uni-heidelberg.de/

Ruprecht-Karls-Universit?t Heidelberg
Universit?tsrechenzentrum
Im Neuenheimer Feld 293, 69120 Heidelberg

From utkarsh.ayachit at kitware.com  Mon Feb  8 11:57:42 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Mon, 8 Feb 2016 11:57:42 -0500
Subject: [Paraview] ParaView 5.0.0 with Mesa 11.2-git OSMesa /
	off-screen-rendering
In-Reply-To: <24ed5e0c-1546-4284-b015-c7c5e16e32ea@uni-heidelberg.de>
References: <b7c9bcc8-d006-4c10-b1e7-56894f48d7a3@uni-heidelberg.de>
 <CADHSJjDSXvMwbNeLxXkmA4x9WZSrT2e=OrPG+uK4sSeK83ge_A@mail.gmail.com>
 <b1dedf0a-3deb-477e-a75c-f08eea1a2dd8@uni-heidelberg.de>
 <24ed5e0c-1546-4284-b015-c7c5e16e32ea@uni-heidelberg.de>
Message-ID: <CADHSJjBFsgs_CHx2RvVMehHVO4SCOahLqRiBc6k+b3Wrf+hCRA@mail.gmail.com>

Awesome! Thanks for reporting back.

Utkarsh

On Mon, Feb 8, 2016 at 11:18 AM, Dennis Schridde <
dennis.schridde at uni-heidelberg.de> wrote:

> Hello again!
>
> I just wanted to report success: I built Mesa 11.2.0-devel-24ea81a myself,
> following the example of the Fedora specfile, but using
> --enable-gallium-osmesa instead of --enable-osmesa [1]. The resulting
> library can run ParaView 5.0.0 in off-screen mode.
>
> I reported the issue to the Fedora maintainers [2] and also to the Gentoo
> maintainers [3], as that package was suffering from the same issue.
>
> Best regards,
> Dennis
>
> [1]: https://github.com/urzds/mesa-docker/blob/master/Dockerfile
> [2]: https://bugzilla.redhat.com/show_bug.cgi?id=1305588
> [3]: https://bugs.gentoo.org/show_bug.cgi?id=574070
> --
> Universit?t Heidelberg, Universit?tsrechenzentrum (URZ)
> Servicebereich Future IT - Research & Education (FIRE)
>
> Tel. +49 6221 54-4519, Fax +49 6221 54-5581
> dennis.schridde at uni-heidelberg.de
>
> http://www.urz.uni-heidelberg.de/
>
> Ruprecht-Karls-Universit?t Heidelberg
> Universit?tsrechenzentrum
> Im Neuenheimer Feld 293, 69120 Heidelberg
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From chuck.atkins at kitware.com  Mon Feb  8 14:51:15 2016
From: chuck.atkins at kitware.com (Chuck Atkins)
Date: Mon, 8 Feb 2016 14:51:15 -0500
Subject: [Paraview] [Non-DoD Source] Building on Cray systems
In-Reply-To: <1381337291.26567619.1454668599040.JavaMail.root@mail.gatech.edu>
References: <CAMaOp+H1HdgBJmcHr-GWn=O9JgSDd=ubYioEwFgokZdUvOzfpg@mail.gmail.com>
 <1381337291.26567619.1454668599040.JavaMail.root@mail.gatech.edu>
Message-ID: <CAOXZzG7YoP=3TvmteZm6y82iMAiNqOFhWnWQrJV+pwa3do4vsA@mail.gmail.com>

Hi Tim,

When building CMake on a Cray, you'll want to build using the host system
compilers, i.e. /usr/bin/gcc and /usr/bin/g++, not with the cray compiler
wrappers.  Usually I just do:

module purge
CC=/usr/bin/gcc CXX=/usr/bin/g++ /path/to/cmake_source/bootstrap
--prefix=/path/to/cmake/install --parallel=8
make -j8 install

The resulting CMake binary can then run on either the login nodes or
compute nodes and target anything that CMake supports.  I would also
suggest building CMake from either the latest git master branch or the
current 3.5 release candidate.  I've added a new platform file for the Cray
Linux Environment that knows how to introspect the compiler wrappers,
correctly deal with static / shared, etc, not currently available in the
3.4 release.  You can use it by loading your appropriate PrgEnv module
setting CMAKE_SYSTEM_NAME=CrayLinuxEnvironment or using a toolchain file
like this:

# The name of the target operating system
set(CMAKE_SYSTEM_NAME CrayLinuxEnvironment) # This handles all the oddball
Cray stuff

if(DEFINED ENV{ASYNCPE_DIR})    # Older Cray programming environment
  set(COMP_DIR $ENV{ASYNCPE_DIR})
elseif(DEFINED ENV{CRAYPE_DIR}) # Newer Cray programming environment
  set(COMP_DIR $ENV{CRAYPE_DIR})
else()
  message(FATAL_ERROR "Unable to determine compiler dir")
endif()

# Set the compilers
set(CMAKE_C_COMPILER       ${COMP_DIR}/bin/cc)
set(CMAKE_CXX_COMPILER     ${COMP_DIR}/bin/CC)
set(CMAKE_Fortran_COMPILER ${COMP_DIR}/bin/ftn)


- Chuck

On Fri, Feb 5, 2016 at 5:36 AM, Tim Gallagher <tim.gallagher at gatech.edu>
wrote:

> Sorry if you get this multiple times -- the original was blocked from the
> PV list because the output log was too big. I can send the log I referred
> to off-list to anybody who is interested.
>
> --------------------------------------------------
>
> Good morning!
>
> Thanks Andy and Richard for the advice.
>
> After banging my head on my keyboard for most of the day yesterday,
> neither approach worked on Copper.
>
> For Andy's suggestion of building pv5.0 with the Cray cross compiling
> script, I got a bunch of errors towards the end. It looks like many things
> did build, but then those errors about an unknown system kicked in and it
> seemed to all fall apart. I attached the output log as cray_build_pv5.0.txt
>
> Richard, I tried your setup as well. I initially was trying to avoid the
> building CMake step but eventually something in the ParaviewSuperbuild
> failed because it said it needed CMake 2.8.11 and Copper only has 2.8.10.
> So, I took a step back and tried to build CMake. When I just do what is in
> your script -- configure and then make -- the build fails quickly because
> it says it cannot statically link shared libraries. So I tried to build
> CMake using the Catamount.cmake toolchain that we use for our application
> code as well. The initial configuration took over an hour, it sits at 95%
> for a long time going through the portion where it looks for various
> headers/features. But eventually it finishes and I tried to build but that
> failed. I get:
>
> tgallagh at copper01:~/cmake/build> make
> [  3%] Built target cmsys
> [  4%] Built target cmsys_c
> [  6%] Built target cmzlib
> [  6%] Building C object
> Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o
> /u/tgallagh/cmake/cmake/Utilities/cmcurl/lib/strerror.c:32:6: error:
> #error "strerror_r MUST be either POSIX, glibc or vxworks-style"
>  #    error "strerror_r MUST be either POSIX, glibc or vxworks-style"
>       ^
> make[2]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o]
> Error 1
> make[1]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/all] Error 2
>
> So taking a big step backwards here to look at the big picture -- am I
> (and our lab) just using Cray systems in a fundamentally incorrect way?
> We've always struggled to get things to build when we never have had issues
> with SGI/Intel, BlueGene, or IBM machines (even when they were using
> PowerPC). We used to have all these same issues with our CFD code on Cray
> as well and the only solution we found was to build all of our codes'
> libraries statically and drop support for shared libraries.
>
> I appreciate the help with the scripts. If there's any follow-up advice on
> what I'm doing wrong in both/either approach, that would be great.
>
> Thanks,
>
> Tim
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From djortley at gmail.com  Mon Feb  8 15:14:39 2016
From: djortley at gmail.com (David Ortley)
Date: Mon, 8 Feb 2016 13:14:39 -0700
Subject: [Paraview] Parallel unfriendly filters?
Message-ID: <CAOmyp+T1xbwga1uuVC9uWnWADAxh9hjbUJC0mV0_UQ5-V-YU9w@mail.gmail.com>

I'm running Paraview in client/server mode with the server running on an
HPC platform across multiple nodes.

My input is a multi-block silo file that contains ghost zone information.
The way I do a seamless contour when visualizing on my workstation is to do
the following:

Load the silo file
    -> Threshold out the ghost zones (threshold filter)
        -> Merge the blocks
            -> Cell data to point data
                -> Contour

This works well enough when on a single machine.  But when visualizing
client/server with the server running across multiple nodes, there appear
seams on the contours.

Is this an expected behavior given my setup?  Are any of the filters that I
listed above (Threshold, Merge Blocks, Cell data to point data, and
Contour) not fully implemented in parallel yet?

nb - I've not spent a lot of time trying to debug the problem, so I don't
know if the problem exists when a server is running on a single node only.
It looks like something that is happening at node boundaries, but I could
be wrong and it could be a per/processor thing.

Thanks.

-David Ortley
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From dan.lipsa at kitware.com  Mon Feb  8 15:34:05 2016
From: dan.lipsa at kitware.com (Dan Lipsa)
Date: Mon, 8 Feb 2016 15:34:05 -0500
Subject: [Paraview] Parallel unfriendly filters?
In-Reply-To: <CAOmyp+T1xbwga1uuVC9uWnWADAxh9hjbUJC0mV0_UQ5-V-YU9w@mail.gmail.com>
References: <CAOmyp+T1xbwga1uuVC9uWnWADAxh9hjbUJC0mV0_UQ5-V-YU9w@mail.gmail.com>
Message-ID: <CADwGrVq54Zv9FkEFvHQ7fO6L1HoPrske-CWPfi7_kiVdkUVBRQ@mail.gmail.com>

David,
Why do you need to do 'cell data to point data'? Can you try without that
step?

On Mon, Feb 8, 2016 at 3:14 PM, David Ortley <djortley at gmail.com> wrote:

> I'm running Paraview in client/server mode with the server running on an
> HPC platform across multiple nodes.
>
> My input is a multi-block silo file that contains ghost zone information.
> The way I do a seamless contour when visualizing on my workstation is to do
> the following:
>
> Load the silo file
>     -> Threshold out the ghost zones (threshold filter)
>         -> Merge the blocks
>             -> Cell data to point data
>                 -> Contour
>
> This works well enough when on a single machine.  But when visualizing
> client/server with the server running across multiple nodes, there appear
> seams on the contours.
>
> Is this an expected behavior given my setup?  Are any of the filters that
> I listed above (Threshold, Merge Blocks, Cell data to point data, and
> Contour) not fully implemented in parallel yet?
>
> nb - I've not spent a lot of time trying to debug the problem, so I don't
> know if the problem exists when a server is running on a single node only.
> It looks like something that is happening at node boundaries, but I could
> be wrong and it could be a per/processor thing.
>
> Thanks.
>
> -David Ortley
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
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>
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From kmorel at sandia.gov  Mon Feb  8 15:35:38 2016
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Mon, 8 Feb 2016 20:35:38 +0000
Subject: [Paraview] Parallel unfriendly filters?
Message-ID: <D2DE49C2.2C9C1%kmorel@sandia.gov>

Have you tried doing the threshold last (after the contour) rather than first? Generally, ParaView relies on ghost zones (cells) to avoid artifacts across process boundaries.

-Ken


From: ParaView <paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>> on behalf of David Ortley <djortley at gmail.com<mailto:djortley at gmail.com>>
Date: Monday, February 8, 2016 at 1:14 PM
To: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] [Paraview] Parallel unfriendly filters?

I'm running Paraview in client/server mode with the server running on an HPC platform across multiple nodes.

My input is a multi-block silo file that contains ghost zone information.  The way I do a seamless contour when visualizing on my workstation is to do the following:

Load the silo file
    -> Threshold out the ghost zones (threshold filter)
        -> Merge the blocks
            -> Cell data to point data
                -> Contour

This works well enough when on a single machine.  But when visualizing client/server with the server running across multiple nodes, there appear seams on the contours.

Is this an expected behavior given my setup?  Are any of the filters that I listed above (Threshold, Merge Blocks, Cell data to point data, and Contour) not fully implemented in parallel yet?

nb - I've not spent a lot of time trying to debug the problem, so I don't know if the problem exists when a server is running on a single node only.  It looks like something that is happening at node boundaries, but I could be wrong and it could be a per/processor thing.

Thanks.

-David Ortley
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From djortley at gmail.com  Mon Feb  8 15:56:33 2016
From: djortley at gmail.com (David Ortley)
Date: Mon, 8 Feb 2016 13:56:33 -0700
Subject: [Paraview] Parallel unfriendly filters?
In-Reply-To: <D2DE49C2.2C9C1%kmorel@sandia.gov>
References: <D2DE49C2.2C9C1%kmorel@sandia.gov>
Message-ID: <CAOmyp+Sj-jn6sstfCCtuq=g8vFjcSkv+y2xtPw7AWcXOzkmHag@mail.gmail.com>

Kenneth:

The ghost zones are the contents of the ghost zones stored from the
calculation. They overlap into the hydro from neighboring processors (the
silo library stores a block per processor the way we're using it in our
code.)  If I leave them in there, I get artifacts.  I'm actually
thresholding out a variable called 'avtGhostZones', which the silo
libraries call the stored ghost zone values.


Dan:

Cell Data to Point Data is the only way I know of to activate the contour
filter for silo files.  The results are stored in cell arrays, which
apparently don't activate the contour filter.  I stumbled upon using Cell
Data to Point Data by accident, so if there's a better way to do this, I'm
open to it.


Thanks.

-David Ortley

On Mon, Feb 8, 2016 at 1:35 PM, Moreland, Kenneth <kmorel at sandia.gov> wrote:

> Have you tried doing the threshold last (after the contour) rather than
> first? Generally, ParaView relies on ghost zones (cells) to avoid artifacts
> across process boundaries.
>
> -Ken
>
>
> From: ParaView <paraview-bounces at paraview.org> on behalf of David Ortley <
> djortley at gmail.com>
> Date: Monday, February 8, 2016 at 1:14 PM
> To: "paraview at paraview.org" <paraview at paraview.org>
> Subject: [EXTERNAL] [Paraview] Parallel unfriendly filters?
>
> I'm running Paraview in client/server mode with the server running on an
> HPC platform across multiple nodes.
>
> My input is a multi-block silo file that contains ghost zone information.
> The way I do a seamless contour when visualizing on my workstation is to do
> the following:
>
> Load the silo file
>     -> Threshold out the ghost zones (threshold filter)
>         -> Merge the blocks
>             -> Cell data to point data
>                 -> Contour
>
> This works well enough when on a single machine.  But when visualizing
> client/server with the server running across multiple nodes, there appear
> seams on the contours.
>
> Is this an expected behavior given my setup?  Are any of the filters that
> I listed above (Threshold, Merge Blocks, Cell data to point data, and
> Contour) not fully implemented in parallel yet?
>
> nb - I've not spent a lot of time trying to debug the problem, so I don't
> know if the problem exists when a server is running on a single node only.
> It looks like something that is happening at node boundaries, but I could
> be wrong and it could be a per/processor thing.
>
> Thanks.
>
> -David Ortley
>
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From kmorel at sandia.gov  Mon Feb  8 16:08:20 2016
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Mon, 8 Feb 2016 21:08:20 +0000
Subject: [Paraview] Parallel unfriendly filters?
Message-ID: <D2DE4FFA.2C9FD%kmorel@sandia.gov>

David,

Yes, I figured that's what you meant by ghost zones. My point is that you can leave these in for the contour operation. Because you have overlapping cells, the processors on each side of the boundary will compute the same data at the boundary.

The trick is to carry avtGhostZones all the way through the calculations. If done correctly, then the surface computed by Contour will have avtGhostZones cell data, and you can strip out the ghost zones in the contour. The only caveat is to be careful with the Cell Data to Point Data filter because the avtGhostZones array will be invalid if converted from cells to points. You can tell the Cell Data to Point Data filter to just pass the cell data.

-Ken

From: ParaView <paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>> on behalf of David Ortley <djortley at gmail.com<mailto:djortley at gmail.com>>
Date: Monday, February 8, 2016 at 1:56 PM
Cc: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] Re: [Paraview] Parallel unfriendly filters?

Kenneth:

The ghost zones are the contents of the ghost zones stored from the calculation. They overlap into the hydro from neighboring processors (the silo library stores a block per processor the way we're using it in our code.)  If I leave them in there, I get artifacts.  I'm actually thresholding out a variable called 'avtGhostZones', which the silo libraries call the stored ghost zone values.


Dan:

Cell Data to Point Data is the only way I know of to activate the contour filter for silo files.  The results are stored in cell arrays, which apparently don't activate the contour filter.  I stumbled upon using Cell Data to Point Data by accident, so if there's a better way to do this, I'm open to it.


Thanks.

-David Ortley

On Mon, Feb 8, 2016 at 1:35 PM, Moreland, Kenneth <kmorel at sandia.gov<mailto:kmorel at sandia.gov>> wrote:
Have you tried doing the threshold last (after the contour) rather than first? Generally, ParaView relies on ghost zones (cells) to avoid artifacts across process boundaries.

-Ken


From: ParaView <paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>> on behalf of David Ortley <djortley at gmail.com<mailto:djortley at gmail.com>>
Date: Monday, February 8, 2016 at 1:14 PM
To: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] [Paraview] Parallel unfriendly filters?

I'm running Paraview in client/server mode with the server running on an HPC platform across multiple nodes.

My input is a multi-block silo file that contains ghost zone information.  The way I do a seamless contour when visualizing on my workstation is to do the following:

Load the silo file
    -> Threshold out the ghost zones (threshold filter)
        -> Merge the blocks
            -> Cell data to point data
                -> Contour

This works well enough when on a single machine.  But when visualizing client/server with the server running across multiple nodes, there appear seams on the contours.

Is this an expected behavior given my setup?  Are any of the filters that I listed above (Threshold, Merge Blocks, Cell data to point data, and Contour) not fully implemented in parallel yet?

nb - I've not spent a lot of time trying to debug the problem, so I don't know if the problem exists when a server is running on a single node only.  It looks like something that is happening at node boundaries, but I could be wrong and it could be a per/processor thing.

Thanks.

-David Ortley

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From wascott at sandia.gov  Mon Feb  8 20:12:40 2016
From: wascott at sandia.gov (Scott, W Alan)
Date: Tue, 9 Feb 2016 01:12:40 +0000
Subject: [Paraview] [EXTERNAL] [Paraview-developers] ANN: ParaView 5.0.1
	coming soon
In-Reply-To: <CADHSJjAyd-_aqQ_jC2wJjH7M0fVg2VOFMNahm=2s0nfNPX7S=w@mail.gmail.com>
References: <CADHSJjAyd-_aqQ_jC2wJjH7M0fVg2VOFMNahm=2s0nfNPX7S=w@mail.gmail.com>
Message-ID: <0424f299c74c4aa6a6f2bf887511cf81@ES01AMSNLNT.srn.sandia.gov>

Utkarsh,
Thanks for the heads up.

All,
The link below didn?t work for me.  It just shows a huge number of bugs.  However, if you select ?Target Version? 5.0.1, then Apply Filter, you will see the upcoming changes for the small patch release.  The main one of interest for folks that build and use remote server is 15960.

Alan

From: Paraview-developers [mailto:paraview-developers-bounces at paraview.org] On Behalf Of Utkarsh Ayachit
Sent: Friday, February 05, 2016 8:00 AM
To: ParaView; ParaView Developers
Subject: [EXTERNAL] [Paraview-developers] ANN: ParaView 5.0.1 coming soon

Folks,

Just wanted to let everyone know that we're working on a small patch release of ParaView. For list of bug fixed/targeted for this patch release is:

http://www.paraview.org/Bug/view_all_bug_page.php?filter=107037

The release should happen in month of Feb.

Utkarsh




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From dan.lipsa at kitware.com  Tue Feb  9 09:04:41 2016
From: dan.lipsa at kitware.com (Dan Lipsa)
Date: Tue, 9 Feb 2016 09:04:41 -0500
Subject: [Paraview] Parallel unfriendly filters?
In-Reply-To: <CAOmyp+Sj-jn6sstfCCtuq=g8vFjcSkv+y2xtPw7AWcXOzkmHag@mail.gmail.com>
References: <D2DE49C2.2C9C1%kmorel@sandia.gov>
 <CAOmyp+Sj-jn6sstfCCtuq=g8vFjcSkv+y2xtPw7AWcXOzkmHag@mail.gmail.com>
Message-ID: <CADwGrVri+y+htcxGTBTssLEkH+efEzxFKmZuBpwNTg1mipVzhA@mail.gmail.com>

>
>
>
> Cell Data to Point Data is the only way I know of to activate the contour
> filter for silo files.  The results are stored in cell arrays, which
> apparently don't activate the contour filter.  I stumbled upon using Cell
> Data to Point Data by accident, so if there's a better way to do this, I'm
> open to it.
>

I see. I would go with Ken's suggestions, then.  I would also create a new
array called  'vtkGhostType' from 'avtGhostZones'. You could do that
instead of thresholding out the ghost zones. VTK knows about vtkGhostType
name. I think you could leave those in as they should not be rendered.

You can create the new array from avtGhostZone using the Calculator filter.

Dan
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From raynaud at turboscience.de  Tue Feb  9 09:31:57 2016
From: raynaud at turboscience.de (Felix Raynaud)
Date: Tue, 09 Feb 2016 15:31:57 +0100
Subject: [Paraview] Cylinder axis for slices spatially limited within
	bounding box
Message-ID: <2210566.AvhWnFNAtH@baguette>

Hi there, 
I've just tried the new slice type "cylinder" and can observe a strange 
behaviour (bug?).
I'm post-processing a one-sector jet engine turbine and the engine axis is 
"far away" from the visible geometry and thus outside its bounding box. I'd 
like to make a cylinder-slice whose axis is the engine axis and radius 
something between turbine hub and shroud radius. And it's impossible... The 
resulting cylinder axis stays fixed on one face of the bounding box!
Does somebody observe the same behaviour ? Is there a workaround?
Tanks for your help!
Felix


From njenkins360 at gmail.com  Tue Feb  9 10:40:07 2016
From: njenkins360 at gmail.com (Nicholas Jenkins)
Date: Tue, 9 Feb 2016 07:40:07 -0800
Subject: [Paraview] Antivirus Quarantining paraview.exe
Message-ID: <CABcpf4ZeQ8PtPFhRYWrmsQ-WXOH6ZKO1LtQ1My_bF8nN8pYNbg@mail.gmail.com>

Has anybody experienced this issue? My Panda Antivirus keeps quarantining
paraview.exe as soon as I install it.

I'm not sure if they are using a script sequence that is picked up as
malicious, or it's actually infected?

I'm on Windows 7 64-bit, and installing the latest stable version.

Thanks.

Nick Jenkins
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From remy.mercenier at geo.uzh.ch  Tue Feb  9 11:12:26 2016
From: remy.mercenier at geo.uzh.ch (=?iso-8859-1?B?UulteSBNZXJjZW5pZXI=?=)
Date: 9 Feb 2016 17:12:26 +0100
Subject: [Paraview] Building a stress tensor to compute eigenvalues and
	eigenvectors
Message-ID: <DUB124-W2874ECF0B26D1BE229413FD2D60@phx.gbl>

Hello, 

I would like to compute the eigenvalues/eigenvectors of a stress tensor using either the python calculator or the tensor glyph filter. However, as far as i understand, i need to have 3D matrices to use these filters but when reading my exodusII file in paraview, i get each stress component as a single variable. Would there be a way to group these variables into a 3D tensor within paraview?

Also, i renamed the stress components to have sxx, sxy, sxz, syx, syy, syz, szx, szy, szz notations but this gave me 3 vectors sx, sy and sz when i opened the exodusII file in paraview instead of one vector s containing all the stress components.   

Thank you for your help,
R?my Mercenier
PhD student
 		 	   		  
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From tomislav.maric at gmx.com  Tue Feb  9 11:59:44 2016
From: tomislav.maric at gmx.com (Tomislav Maric)
Date: Tue, 9 Feb 2016 17:59:44 +0100
Subject: [Paraview] ParaView Binary Installer 5.0 - Linux 64 bit - Scene
 Export : SVG, EPS and PDF formats missing
Message-ID: <56BA1B00.9080708@gmx.com>

Hello everyone,

I am using ParaView 5.0 from the 64 bit binary installer on on Arch
Linux. When I click on File->Export Scene, I can't find the SVG, EPS and
PDF formats.

Is the pre-built binary not linked against gl2ps
(http://www.paraview.org/Wiki/ParaView/Vector_Graphics_Export) ?

Do I need to define an environmental variable apart from extending PATH
to the location of the ParaView binary?

Thank you!

Tomislav

From burlen.loring at gmail.com  Tue Feb  9 12:22:45 2016
From: burlen.loring at gmail.com (Burlen Loring)
Date: Tue, 9 Feb 2016 09:22:45 -0800
Subject: [Paraview] paraview crashes during startup
Message-ID: <56BA2065.50108@gmail.com>

A fresh clone as of midday yesterday PV client fails to launch with the 
below error. I enabled mpi and python, everything else is default value.

libGL error: No matching fbConfigs or visuals found
libGL error: failed to load driver: swrast
X Error: BadValue (integer parameter out of range for operation) 2
   Extension:    153 (Uknown extension)
   Minor opcode: 3 (Unknown request)
   Resource id:  0x0

apparently ParaView's attempting to load swrast,  a mesa renderer, 
although I have nvidia gpu and drivers. I also tried the OpenGL2 backend 
and encountered the same error. To work around this I manually located 
the nvidia headers and opengl library and forced cmake to use those.

I'm not sure if you want to call this a bug in ParaView or the CMake 
find opengl module. But ParaView should probably correctly detect and 
use nvidia drivers, and ignore mesa drivers, which are likely present on 
every system no matter if third party gpu/driver is installed or not.

Burlen



From salazardetro1 at llnl.gov  Tue Feb  9 12:20:26 2016
From: salazardetro1 at llnl.gov (Salazar De Troya, Miguel)
Date: Tue, 9 Feb 2016 17:20:26 +0000
Subject: [Paraview] Combining files in an animation
Message-ID: <D2DF5FDA.10ED%salazardetro1@llnl.gov>

Hello

Newbie here, hopefully my question is not too obvious. I have two .e files from two consecutive optimization iterations. I want to show how the results evolve from one iteration to the next with an animation. What I did was to add the two files in the animation and modify the field Opacity from 1 to 0 for the first iteration and from 0 to 1 for the second one during the same time span from 0 to 1. Both with a Ramp interpolation. I would like to see that transition combined. Instead of having a value of 0.5 for both files at time 0.5, I would like to have an overall result of 1. Is it possible to add the Opacities and have that represented in the Animation?

Thanks
Miguel
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From Mark.Stock at nrel.gov  Tue Feb  9 13:02:45 2016
From: Mark.Stock at nrel.gov (Stock, Mark)
Date: Tue, 9 Feb 2016 18:02:45 +0000
Subject: [Paraview] How to give Python access to a Plugin
Message-ID: <1455040965146.48677@nrel.gov>

Hello,

I don't seem to be able to access properties in the VRPlugin from a Python source or filter. I can see other Plugins in the Python Shell (if I load the plugin before opening the shell for the first time), but only filter or source plugins. Is this related to the .xml file in some plugin source directories?

I ultimately want to allow a VR CAVE user to select points in 3D space with a tracked device, much like the "Interactive Select Points On" feature in the GUI in 4.4.0 and later. If anybody has suggestions for how to do this, I would be appreciative.

Mark

From utkarsh.ayachit at kitware.com  Tue Feb  9 13:46:14 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Tue, 9 Feb 2016 13:46:14 -0500
Subject: [Paraview] How to give Python access to a Plugin
In-Reply-To: <1455040965146.48677@nrel.gov>
References: <1455040965146.48677@nrel.gov>
Message-ID: <CADHSJjD8L9zs+3DakLVXYZyOqTEzVZPpQGwkVP=NT3X1prbOgQ@mail.gmail.com>

> I don't seem to be able to access properties in the VRPlugin from a Python source or filter. I can see other Plugins in the Python Shell (if I load the plugin before opening the shell for the first time), but only filter or source plugins. Is this related to the .xml file in some plugin source directories?

ParaView doesn't provide access all the classes for access in Python
only filters/sources etc. The VR plugin doesn't have any of these are
is primarily implemented using GUI level code and hence you don't have
access to anything from the VR plugin in Python.


> I ultimately want to allow a VR CAVE user to select points in 3D space with a tracked device, much like the "Interactive Select Points On" feature in the GUI in 4.4.0 and later. If anybody has suggestions for how to do this, I would be appreciative.

A good approach would be to create a new interactor style (by
subclassing  vtkVRInteractorStyle  similar to
vtkVRControlSliceOrientationStyle, vtkVRGrabWorldStyle etc.) to handle
the tracker event to then do the work for picking and showing pick
information.

Utkarsh

From david.lonie at kitware.com  Tue Feb  9 13:51:36 2016
From: david.lonie at kitware.com (David Lonie)
Date: Tue, 9 Feb 2016 13:51:36 -0500
Subject: [Paraview] ParaView Binary Installer 5.0 - Linux 64 bit - Scene
 Export : SVG, EPS and PDF formats missing
In-Reply-To: <56BA1B00.9080708@gmx.com>
References: <56BA1B00.9080708@gmx.com>
Message-ID: <CA+=e1otnbG4VLMHnt8-Ni_wT+T6BVOhJsSC0MbM_KPzeNM0C6w@mail.gmail.com>

On Tue, Feb 9, 2016 at 11:59 AM, Tomislav Maric <tomislav.maric at gmx.com> wrote:
> I am using ParaView 5.0 from the 64 bit binary installer on on Arch
> Linux. When I click on File->Export Scene, I can't find the SVG, EPS and
> PDF formats.

Due to differences in the OpenGL features available to the VTK OpenGL2
backend (in particular, the deprecation of the feedback render mode),
the GL2PS exporter was not compatible with builds of ParaView that
used the new backend, such as the 5.0 release.

I've recently made some changes to gl2ps and our exporter that allow
vector export to work again, although with reduced functionality. The
new (OpenGL2) GL2PS exporter will only export the following as vector
graphics:
- Charts, etc (anything drawn via the vtkContext2D interface)
- 2D Text (as native text objects or generic path objects; see
vtkGL2PSExporter::TextAsPath)
- 2D MathText (always as path objects)
- 3D Text (always as path objects)

All other rendered objects (including polygonal data previously
exported as vectors by the old backend) will be rasterized to the
image's background.

This should be available in the next paraview release. In the
meantime, builds of ParaView that use the OpenGL VTK backend will
still have the old implementation of the exporter available.

Hope this helps,
Dave

From wascott at sandia.gov  Tue Feb  9 15:48:26 2016
From: wascott at sandia.gov (Scott, W Alan)
Date: Tue, 9 Feb 2016 20:48:26 +0000
Subject: [Paraview] [EXTERNAL] Cylinder axis for slices spatially
 limited within	bounding box
In-Reply-To: <2210566.AvhWnFNAtH@baguette>
References: <2210566.AvhWnFNAtH@baguette>
Message-ID: <c4c3a46ef8ca4e9cacc1c3334491f826@ES01AMSNLNT.srn.sandia.gov>

Felix,
Complicated answer to a simple question.  Here goes.

The cylinder slice and clip were added in 4.4.0.  The error you ask about below is in ParaView 4.4.0.  It was fixed for PV 5.0.0.  You may want to upgrade to ParaView 5.0.0.  However, in researching this issue, I did find a few annoying issues, and wrote up bugs.  They are here:  http://www.paraview.org/Bug/view.php?id=15985 and  http://www.paraview.org/Bug/view.php?id=15984.  Fixes are scheduled for next summer.

Alan

-----Original Message-----
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Felix Raynaud
Sent: Tuesday, February 09, 2016 7:32 AM
To: paraview at paraview.org
Subject: [EXTERNAL] [Paraview] Cylinder axis for slices spatially limited within bounding box

Hi there,
I've just tried the new slice type "cylinder" and can observe a strange behaviour (bug?).
I'm post-processing a one-sector jet engine turbine and the engine axis is "far away" from the visible geometry and thus outside its bounding box. I'd like to make a cylinder-slice whose axis is the engine axis and radius something between turbine hub and shroud radius. And it's impossible... The resulting cylinder axis stays fixed on one face of the bounding box!
Does somebody observe the same behaviour ? Is there a workaround?
Tanks for your help!
Felix

_______________________________________________
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Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html

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Search the list archives at: http://markmail.org/search/?q=ParaView

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From tim.gallagher at gatech.edu  Tue Feb  9 17:34:09 2016
From: tim.gallagher at gatech.edu (Tim Gallagher)
Date: Tue, 9 Feb 2016 17:34:09 -0500 (EST)
Subject: [Paraview] Periodicity aware streamline?
Message-ID: <1604714683.27218617.1455057249248.JavaMail.root@mail.gatech.edu>

Hi,

I have a simulation that is periodic in 2 of the 3 directions and I would like to plot some streamlines coming from specific points in the domain. Some of these points are close to one of the periodic edges. 

Is there a way to tell Paraview that the domain is periodic and that streamline integration can continue from the opposite face? 

Thanks,

Tim

From maititia at egr.msu.edu  Tue Feb  9 19:08:27 2016
From: maititia at egr.msu.edu (Tias Maiti)
Date: Tue, 9 Feb 2016 19:08:27 -0500
Subject: [Paraview] How to uncheck Map Scalars using ParaView Python console
Message-ID: <6956E39F-8078-4889-B463-FFD710E1A231@egr.msu.edu>

Hi,

I am trying to set RGB color based on a data with 3 components. Unchecking "Map Scalars" checkbox under Scalar coloring does the trick in GUI mode. Is there a way to do it using pvpython (scripts) ?

How do I set up the lookup table to do the same thing ?

Thanks,
Tias

???????????????
Tias Maiti
Research Assistant
Computational Material Mechanics
Michigan State University

From cory.quammen at kitware.com  Tue Feb  9 23:01:56 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Tue, 9 Feb 2016 23:01:56 -0500
Subject: [Paraview] How to uncheck Map Scalars using ParaView Python
	console
In-Reply-To: <6956E39F-8078-4889-B463-FFD710E1A231@egr.msu.edu>
References: <6956E39F-8078-4889-B463-FFD710E1A231@egr.msu.edu>
Message-ID: <CAB5Fpx5JF=hZBf7RPXkBSraWxRZAQLs=cfWCk+t9ts_0iN2cDA@mail.gmail.com>

Tias,

Sure, there is, and it's easy to find out how. Under the Tools menu,
choose, Start Trace. In the dialog box that appears, click OK. Now
uncheck the Map Scalars checkbox in your pipeline object. Stop the
trace by selecting Stop Trace in the Tools menu.

Doing this for a simple sphere source, the trace gives:

# get active source.
sphere1 = GetActiveSource()

# get active view
renderView1 = GetActiveViewOrCreate('RenderView')
# uncomment following to set a specific view size
# renderView1.ViewSize = [684, 597]

# get display properties
sphere1Display = GetDisplayProperties(sphere1, view=renderView1)

# Properties modified on sphere1Display
sphere1Display.MapScalars = 0

This last line gets you what you want.

HTH,
Cory

On Tue, Feb 9, 2016 at 7:08 PM, Tias Maiti <maititia at egr.msu.edu> wrote:
> Hi,
>
> I am trying to set RGB color based on a data with 3 components. Unchecking "Map Scalars" checkbox under Scalar coloring does the trick in GUI mode. Is there a way to do it using pvpython (scripts) ?
>
> How do I set up the lookup table to do the same thing ?
>
> Thanks,
> Tias
>
> ???????????????
> Tias Maiti
> Research Assistant
> Computational Material Mechanics
> Michigan State University
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.

From david.larsson at sth.kth.se  Wed Feb 10 03:46:44 2016
From: david.larsson at sth.kth.se (David Larsson)
Date: Wed, 10 Feb 2016 08:46:44 +0000
Subject: [Paraview] Cut plane average velocity over time
Message-ID: <f478ba8b5ddb4d199952c52bf31c2415@exdb01.ug.kth.se>

Dear all,

I am working with 3D velocity fields over time. I would like to extract average velocity values at given cut planes. Preferably, I would like to be able to plot the average velocity of this plane over time.

For a single point on the plane I can choose "Select Points On" and then "PlotSelectionOverTime", but I would like to get an average over an entire cut plane (over time).

Does anyone know how to do that?

Thanks for the help,

/David

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From christophe.bourcier.pv at gmail.com  Wed Feb 10 06:00:51 2016
From: christophe.bourcier.pv at gmail.com (Christophe Bourcier)
Date: Wed, 10 Feb 2016 12:00:51 +0100
Subject: [Paraview] Plot on sorted lines with Cell Array
Message-ID: <CAKtnqfkUDKaifw1PuFU41Yq9gmEi2bSawqO2EQtEeSkUiVYOdA@mail.gmail.com>

Dear Paraview users,

I want to plot a field on cells with the same discretization as my
mesh. So I don't use Plot over line, but Plot on sorted lines with 2
slices to get the polyline to plot data on.

It works well with a field on nodes, but I can't get a result with a
field on cell. Of course if I use Cell data point data, I get a plot,
but with mean values on the nodes.

In Plot on sorted lines properties, if I choose Attribute type Cell
data, I can't see my field on cells in the list of available fields.

To reproduce the issue:
- download the dataset (802K) : http://bourcier.eu/secteur.tgz
- open it
- display the field U2
- apply a slice in Z normal
- apply a slice in Y normal
- apply Plot on sorted lines
- change Attribute type to Cell data: the field U2 is not available.
- apply the filter Cell data to point data (with Pass Cell Data
ticked) before Plot on sorted lines
- in Point Data, U2 is available, but the resulting plot has mean
values on nodes between cells that have not the same value on the left
and on the right. Zoom at the right end of the line to see it.
- in Cell Data, U2 is now also available, but nothing is displayed. I
would have expected to see a stairstep graph.

Have you an idea on how to get this?

Thank you.

Christophe

From dennis_conklin at goodyear.com  Wed Feb 10 07:51:31 2016
From: dennis_conklin at goodyear.com (Dennis Conklin)
Date: Wed, 10 Feb 2016 12:51:31 +0000
Subject: [Paraview] Building a stress tensor to compute eigenvalues and
	engenvectors
Message-ID: <SN1PR0701MB202928C023B373CF4F312F8F9FD70@SN1PR0701MB2029.namprd07.prod.outlook.com>

Remy,

Attached is a programmable filter I wrote to do just this.   It should be fairly obvious, but ask questions if it isn't.

Dennis
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From andy.bauer at kitware.com  Wed Feb 10 09:16:17 2016
From: andy.bauer at kitware.com (Andy Bauer)
Date: Wed, 10 Feb 2016 09:16:17 -0500
Subject: [Paraview] Periodicity aware streamline?
In-Reply-To: <1604714683.27218617.1455057249248.JavaMail.root@mail.gatech.edu>
References: <1604714683.27218617.1455057249248.JavaMail.root@mail.gatech.edu>
Message-ID: <CAMaOp+HEg5HtHAd3cmdk_e9CWYcuA2XVeDL+oH7K2va-c8zUxw@mail.gmail.com>

Hi Tim,

There isn't any such functionality that exists directly in PV like this. A
long way of doing this may be:

   - StreamTracer for first set of streamlines
   - Use threshold or cut filter to get last points before they exit the
   domain
   - Use the Transform filter to move these points to the entrance of the
   domain on the other periodic side
   - StreamTracer with Custom source using Transform filter as source to
   continue the streamlines
   - Calculator filter to adjust IntegrationTime and other field values (if
   this is important you'll probably need to do this one streamline at a time).

This may get a bit sloppy and unwieldy but that's the best way I can think
about doing what you want.

If you do this and find a better way, please let us know!

Cheers,

Andy




On Tue, Feb 9, 2016 at 5:34 PM, Tim Gallagher <tim.gallagher at gatech.edu>
wrote:

> Hi,
>
> I have a simulation that is periodic in 2 of the 3 directions and I would
> like to plot some streamlines coming from specific points in the domain.
> Some of these points are close to one of the periodic edges.
>
> Is there a way to tell Paraview that the domain is periodic and that
> streamline integration can continue from the opposite face?
>
> Thanks,
>
> Tim
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From berk.geveci at kitware.com  Wed Feb 10 09:31:17 2016
From: berk.geveci at kitware.com (Berk Geveci)
Date: Wed, 10 Feb 2016 09:31:17 -0500
Subject: [Paraview] Periodicity aware streamline?
In-Reply-To: <CAMaOp+HEg5HtHAd3cmdk_e9CWYcuA2XVeDL+oH7K2va-c8zUxw@mail.gmail.com>
References: <1604714683.27218617.1455057249248.JavaMail.root@mail.gatech.edu>
 <CAMaOp+HEg5HtHAd3cmdk_e9CWYcuA2XVeDL+oH7K2va-c8zUxw@mail.gmail.com>
Message-ID: <CAE32kpUnK6qZZzjKEJ1eZz0WqUf1RJX903oiZEgRHDrmCDaG4w@mail.gmail.com>

There is a better way. Build a multi-block structure that creates enough
copies with the appropriate transforms to advance the streamlines as many
periods as you need. Make sure to shallow copy all heavy data structures
such as data arrays. If you are using vtkImageData or vtkRectilinearGrid,
this is easy. If you are using vtkStructuredGrids or vtkUnstructuredGrids,
take a look at vtkPeriodicDataArray and its subclass
vtkAngularPeriodicDataArray. If you need other type of periodicity, you may
need to create a new subclass of vktPeriodicDataArray. Also take a look at
vtkPeriodicFilter that can create such a multi-block dataset.

Best,
-berk

On Wed, Feb 10, 2016 at 9:16 AM, Andy Bauer <andy.bauer at kitware.com> wrote:

> Hi Tim,
>
> There isn't any such functionality that exists directly in PV like this. A
> long way of doing this may be:
>
>    - StreamTracer for first set of streamlines
>    - Use threshold or cut filter to get last points before they exit the
>    domain
>    - Use the Transform filter to move these points to the entrance of the
>    domain on the other periodic side
>    - StreamTracer with Custom source using Transform filter as source to
>    continue the streamlines
>    - Calculator filter to adjust IntegrationTime and other field values
>    (if this is important you'll probably need to do this one streamline at a
>    time).
>
> This may get a bit sloppy and unwieldy but that's the best way I can think
> about doing what you want.
>
> If you do this and find a better way, please let us know!
>
> Cheers,
>
> Andy
>
>
>
>
> On Tue, Feb 9, 2016 at 5:34 PM, Tim Gallagher <tim.gallagher at gatech.edu>
> wrote:
>
>> Hi,
>>
>> I have a simulation that is periodic in 2 of the 3 directions and I would
>> like to plot some streamlines coming from specific points in the domain.
>> Some of these points are close to one of the periodic edges.
>>
>> Is there a way to tell Paraview that the domain is periodic and that
>> streamline integration can continue from the opposite face?
>>
>> Thanks,
>>
>> Tim
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
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>
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From archaerolog at mail.ru  Wed Feb 10 09:47:58 2016
From: archaerolog at mail.ru (Gena Bug)
Date: Wed, 10 Feb 2016 17:47:58 +0300
Subject: [Paraview] Periodicity aware streamline?
In-Reply-To: <CAE32kpUnK6qZZzjKEJ1eZz0WqUf1RJX903oiZEgRHDrmCDaG4w@mail.gmail.com>
References: <1604714683.27218617.1455057249248.JavaMail.root@mail.gatech.edu>
 <CAMaOp+HEg5HtHAd3cmdk_e9CWYcuA2XVeDL+oH7K2va-c8zUxw@mail.gmail.com>
 <CAE32kpUnK6qZZzjKEJ1eZz0WqUf1RJX903oiZEgRHDrmCDaG4w@mail.gmail.com>
Message-ID: <56BB4D9E.1060706@mail.ru>

On 02/10/2016 05:31 PM, Berk Geveci wrote:
> There is a better way. Build a multi-block structure that creates enough
> copies with the appropriate transforms to advance the streamlines as many
> periods as you need. Make sure to shallow copy all heavy data structures
> such as data arrays. If you are using vtkImageData or vtkRectilinearGrid,
> this is easy. If you are using vtkStructuredGrids or vtkUnstructuredGrids,
> take a look at vtkPeriodicDataArray and its subclass
> vtkAngularPeriodicDataArray. If you need other type of periodicity, you may
> need to create a new subclass of vktPeriodicDataArray. Also take a look at
> vtkPeriodicFilter that can create such a multi-block dataset.
AngularPeriodicFilter (since 4.4) exist that do the job, isn't it?

>
> Best,
> -berk
>
> On Wed, Feb 10, 2016 at 9:16 AM, Andy Bauer <andy.bauer at kitware.com> wrote:
>
>> Hi Tim,
>>
>> There isn't any such functionality that exists directly in PV like this. A
>> long way of doing this may be:
>>
>>     - StreamTracer for first set of streamlines
>>     - Use threshold or cut filter to get last points before they exit the
>>     domain
>>     - Use the Transform filter to move these points to the entrance of the
>>     domain on the other periodic side
>>     - StreamTracer with Custom source using Transform filter as source to
>>     continue the streamlines
>>     - Calculator filter to adjust IntegrationTime and other field values
>>     (if this is important you'll probably need to do this one streamline at a
>>     time).
>>
>> This may get a bit sloppy and unwieldy but that's the best way I can think
>> about doing what you want.
>>
>> If you do this and find a better way, please let us know!
>>
>> Cheers,
>>
>> Andy
>>
>>
>>
>>
>> On Tue, Feb 9, 2016 at 5:34 PM, Tim Gallagher <tim.gallagher at gatech.edu>
>> wrote:
>>
>>> Hi,
>>>
>>> I have a simulation that is periodic in 2 of the 3 directions and I would
>>> like to plot some streamlines coming from specific points in the domain.
>>> Some of these points are close to one of the periodic edges.
>>>
>>> Is there a way to tell Paraview that the domain is periodic and that
>>> streamline integration can continue from the opposite face?
>>>
>>> Thanks,
>>>
>>> Tim
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>

From berk.geveci at kitware.com  Wed Feb 10 11:24:26 2016
From: berk.geveci at kitware.com (Berk Geveci)
Date: Wed, 10 Feb 2016 11:24:26 -0500
Subject: [Paraview] Periodicity aware streamline?
In-Reply-To: <56BB4D9E.1060706@mail.ru>
References: <1604714683.27218617.1455057249248.JavaMail.root@mail.gatech.edu>
 <CAMaOp+HEg5HtHAd3cmdk_e9CWYcuA2XVeDL+oH7K2va-c8zUxw@mail.gmail.com>
 <CAE32kpUnK6qZZzjKEJ1eZz0WqUf1RJX903oiZEgRHDrmCDaG4w@mail.gmail.com>
 <56BB4D9E.1060706@mail.ru>
Message-ID: <CAE32kpW0txnuGszTjBrSKBQCQPS4qP+1_xzLMDr87pEb90ZHhw@mail.gmail.com>

Yup. For angular periodicity - for things like turbomachinery. If you have
periodicity in one of the axis such as x, y or z, some custom code is
necessary.

Best,
-berk

On Wed, Feb 10, 2016 at 9:47 AM, Gena Bug <archaerolog at mail.ru> wrote:

> On 02/10/2016 05:31 PM, Berk Geveci wrote:
>
>> There is a better way. Build a multi-block structure that creates enough
>> copies with the appropriate transforms to advance the streamlines as many
>> periods as you need. Make sure to shallow copy all heavy data structures
>> such as data arrays. If you are using vtkImageData or vtkRectilinearGrid,
>> this is easy. If you are using vtkStructuredGrids or vtkUnstructuredGrids,
>> take a look at vtkPeriodicDataArray and its subclass
>> vtkAngularPeriodicDataArray. If you need other type of periodicity, you
>> may
>> need to create a new subclass of vktPeriodicDataArray. Also take a look at
>> vtkPeriodicFilter that can create such a multi-block dataset.
>>
> AngularPeriodicFilter (since 4.4) exist that do the job, isn't it?
>
>
>> Best,
>> -berk
>>
>> On Wed, Feb 10, 2016 at 9:16 AM, Andy Bauer <andy.bauer at kitware.com>
>> wrote:
>>
>> Hi Tim,
>>>
>>> There isn't any such functionality that exists directly in PV like this.
>>> A
>>> long way of doing this may be:
>>>
>>>     - StreamTracer for first set of streamlines
>>>     - Use threshold or cut filter to get last points before they exit the
>>>     domain
>>>     - Use the Transform filter to move these points to the entrance of
>>> the
>>>     domain on the other periodic side
>>>     - StreamTracer with Custom source using Transform filter as source to
>>>     continue the streamlines
>>>     - Calculator filter to adjust IntegrationTime and other field values
>>>
>>>     (if this is important you'll probably need to do this one streamline
>>> at a
>>>     time).
>>>
>>> This may get a bit sloppy and unwieldy but that's the best way I can
>>> think
>>> about doing what you want.
>>>
>>> If you do this and find a better way, please let us know!
>>>
>>> Cheers,
>>>
>>> Andy
>>>
>>>
>>>
>>>
>>> On Tue, Feb 9, 2016 at 5:34 PM, Tim Gallagher <tim.gallagher at gatech.edu>
>>> wrote:
>>>
>>> Hi,
>>>>
>>>> I have a simulation that is periodic in 2 of the 3 directions and I
>>>> would
>>>> like to plot some streamlines coming from specific points in the domain.
>>>> Some of these points are close to one of the periodic edges.
>>>>
>>>> Is there a way to tell Paraview that the domain is periodic and that
>>>> streamline integration can continue from the opposite face?
>>>>
>>>> Thanks,
>>>>
>>>> Tim
>>>> _______________________________________________
>>>> Powered by www.kitware.com
>>>>
>>>> Visit other Kitware open-source projects at
>>>> http://www.kitware.com/opensource/opensource.html
>>>>
>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>> http://paraview.org/Wiki/ParaView
>>>>
>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>
>>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>>
>>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From salazardetro1 at llnl.gov  Wed Feb 10 13:50:02 2016
From: salazardetro1 at llnl.gov (Salazar De Troya, Miguel)
Date: Wed, 10 Feb 2016 18:50:02 +0000
Subject: [Paraview] Adding time steps to a data set
Message-ID: <D2E0C659.1142%salazardetro1@llnl.gov>

Hello

I have several exodus files which are snapshots of an optimization history. Each snapshot reflects a design change and how it is gradually being improved and more optimal. I want to make a movie showing this optimization history.

What I have done so far is to add all the files in the pipeline showing the design field, add each file to the Animation View as a frame and play with the Opacity and the time intervals to show the design transitions. This looks alright, but I what I think that would look better is to use a Temporal Interpolator filter. For that I would need to have a time series. I tried modifying the file names and adjust them to the convention filename.e-s.001, filename.e-s.002, etc, but this doesn?t do anything. I think the reason is because the exodus files do not contain anything related to time. Is this correct? How could I add time to my exodus files within paraview?

Thanks
Miguel

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From tomislav.maric at gmx.com  Wed Feb 10 16:45:44 2016
From: tomislav.maric at gmx.com (Tomislav Maric)
Date: Wed, 10 Feb 2016 22:45:44 +0100
Subject: [Paraview] ParaView Binary Installer 5.0 - Linux 64 bit - Scene
 Export : SVG, EPS and PDF formats missing
In-Reply-To: <CA+=e1otnbG4VLMHnt8-Ni_wT+T6BVOhJsSC0MbM_KPzeNM0C6w@mail.gmail.com>
References: <56BA1B00.9080708@gmx.com>
 <CA+=e1otnbG4VLMHnt8-Ni_wT+T6BVOhJsSC0MbM_KPzeNM0C6w@mail.gmail.com>
Message-ID: <56BBAF88.20504@gmx.com>

Hi Dave,

Yes, that solves the problem, thank you for both the answer and for
coding this stuff!

The exporter helps me generate some kick ass images for scientific
publications using inkscape (SVG + LaTex) directly from the simulation
data.

Best regards,
Tomislav

On 02/09/2016 07:51 PM, David Lonie wrote:
> On Tue, Feb 9, 2016 at 11:59 AM, Tomislav Maric <tomislav.maric at gmx.com> wrote:
>> I am using ParaView 5.0 from the 64 bit binary installer on on Arch
>> Linux. When I click on File->Export Scene, I can't find the SVG, EPS and
>> PDF formats.
> Due to differences in the OpenGL features available to the VTK OpenGL2
> backend (in particular, the deprecation of the feedback render mode),
> the GL2PS exporter was not compatible with builds of ParaView that
> used the new backend, such as the 5.0 release.
>
> I've recently made some changes to gl2ps and our exporter that allow
> vector export to work again, although with reduced functionality. The
> new (OpenGL2) GL2PS exporter will only export the following as vector
> graphics:
> - Charts, etc (anything drawn via the vtkContext2D interface)
> - 2D Text (as native text objects or generic path objects; see
> vtkGL2PSExporter::TextAsPath)
> - 2D MathText (always as path objects)
> - 3D Text (always as path objects)
>
> All other rendered objects (including polygonal data previously
> exported as vectors by the old backend) will be rasterized to the
> image's background.
>
> This should be available in the next paraview release. In the
> meantime, builds of ParaView that use the OpenGL VTK backend will
> still have the old implementation of the exporter available.
>
> Hope this helps,
> Dave


From samuelkey at bresnan.net  Wed Feb 10 20:48:39 2016
From: samuelkey at bresnan.net (Samuel Key)
Date: Wed, 10 Feb 2016 18:48:39 -0700
Subject: [Paraview] Adding time steps to a data set
In-Reply-To: <D2E0C659.1142%salazardetro1@llnl.gov>
References: <D2E0C659.1142%salazardetro1@llnl.gov>
Message-ID: <56BBE877.5050407@bresnan.net>

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From vlad at ll.mit.edu  Wed Feb 10 21:56:27 2016
From: vlad at ll.mit.edu (Liberman, Vladimir - 0881 - MITLL)
Date: Thu, 11 Feb 2016 02:56:27 +0000
Subject: [Paraview] Migrating from ParaView 4.0.1 to 5.0.0
Message-ID: <B6899AF31CC24E4BB593B7FFD4C1DE811907E06A@LLE2K10-MBX01.mitll.ad.local>

I just upgraded from ver. 4.0.1 to 5.0.0. I am reading the same data set, a
frame sequence of AVS_UCD files and  I am trying to play a movie.

The playing speed in 5.0.0 is much slower than in 4.0.1, at least two times
slower. I am not using MPI option in either case. What settings should I
look for to speed up the 5.0.0 performance?

Thanks,

Vlad

 

Staff  Member, Chemical, Microsystem, and Nanoscale Technologies Group
MIT Lincoln Laboratory               E-mail:  <mailto:vlad at ll.mit.edu>
vlad at ll.mit.edu
Room C-137                              Phone: 781 981 3706
244 Wood St.                            Fax:     781 981 4983
Lexington, MA 02420-9108

http://www.ll.mit.edu/mission/electronics/cmnt/bios/liberman-v.html

 

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From alexandre.ancel at cemosis.fr  Thu Feb 11 03:39:46 2016
From: alexandre.ancel at cemosis.fr (Alexandre Ancel)
Date: Thu, 11 Feb 2016 09:39:46 +0100
Subject: [Paraview] EGL build of ParaView
Message-ID: <CADR2tx7a+oJyY=7aTwkL6eHkzFg9QxomzeCZ7ijN859WbHAu2g@mail.gmail.com>

Hello,

I am trying to make the EGL build of ParaView work, but I am encountering
some issues.

First, here is the configure line I used to build ParaView:

cmake .. \
-DBUILD_TESTING=OFF -DPARAVIEW_ENABLE_CATALYST=ON -DPARAVIEW_ENABLE_PYTHON=ON \
-DPARAVIEW_INSTALL_DEVELOPMENT_FILES=ON -DPARAVIEW_USE_MPI=ON \
-DVTK_RENDERING_BACKEND=OpenGL2 -DVTK_USE_OFFSCREEN_EGL=ON \
-DVTK_USE_X=OFF -DPARAVIEW_BUILD_QT_GUI=OFF \
-DEGL_gldispatch_LIBRARY=<path_to_libGLdispatch.so.0> \
-DEGL_INCLUDE_DIR=<path_to_EGL_includes> \
-DCMAKE_INSTALL_PREFIX=<install_prefix>

Everything then builds and installs correctly.

But when I start a pvserver (with no X server launched) on the server where
the data is stored and with a graphic card. I end up having the following
issue in a ParaView pop-up:

"

OpenGL drivers on the server side don't support

required OpenGL features for basic rendering.

Remote rendering will be disabled.


OpenGL Vendor: NVIDIA Corporation

OpenGL Version: 4.5.0 NVIDIA 358.16

OpenGL Renderer: Tesla K80/PCIe/SSE2
"

And then I tried to use volume rendering, but I end up with this error:
"
Some of the representations in this view require remote rendering which,
however, is not available. Rendering may not work as expected.
"
And VR does not work.

I managed to replicate this issue, with both a Nvidia Tesla K80 and GTX 470
with the 358.16 driver from NVidia on a Ubuntu 14.04.

However, when I add the "--disable-xdisplay-test" option to the pvserver. I
don't get the error regarding to OpenGL drivers and I am able to do remote
rendering on the server side.

I also tried adding the "?egl-device-index=0" instead of
"--disable-xdisplay-test", but I am getting the OpenGL error.

Is there something I missed in my ParaView build ?
I guess I should be able to run the pvserver without the
"--disable-xdisplay-test" option, isn't it ?

Another last question, is the EGL internal rendering resolution available
for modification or will it fit the current view of ParaView ? (e.g. for
doing screenshots)


Thanks in advance for the answers,

Best regards,
Alexandre Ancel

-- 
Alexandre Ancel
Docteur, Ing?nieur de recherche / Phd, Research Engineer
Cemosis <http://www.cemosis.fr> - alexandre.ancel at cemosis.fr
Tel: +33 (0)3 68 8*5 02 06*
IRMA - 7, rue Ren? Descartes
67 000 Strasbourg, France
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From dan.lipsa at kitware.com  Thu Feb 11 10:28:37 2016
From: dan.lipsa at kitware.com (Dan Lipsa)
Date: Thu, 11 Feb 2016 10:28:37 -0500
Subject: [Paraview] EGL build of ParaView
In-Reply-To: <CADR2tx7a+oJyY=7aTwkL6eHkzFg9QxomzeCZ7ijN859WbHAu2g@mail.gmail.com>
References: <CADR2tx7a+oJyY=7aTwkL6eHkzFg9QxomzeCZ7ijN859WbHAu2g@mail.gmail.com>
Message-ID: <CADwGrVr9RFwnBYOmVhs-YqZ+iL_7OBbKFXg9pCKXu1KmrqpE4Q@mail.gmail.com>

Alexandre,
Can you check

EGL_INCLUDE_DIR
EGL_LIBRARIES

in CMakeCache.txt

and make sure they point to the libraries that come with the NVidia driver.

You will need:
libEGL, libOpenGL and libGLdispatch

On my machine nvidia libraries are inside
/usr/lib32/nvidia-346. (My machine has an older driver that does not
support EGL)

What are whose values?
Thanks,
Dan





On Thu, Feb 11, 2016 at 3:39 AM, Alexandre Ancel <alexandre.ancel at cemosis.fr
> wrote:

> Hello,
>
> I am trying to make the EGL build of ParaView work, but I am encountering
> some issues.
>
> First, here is the configure line I used to build ParaView:
>
> cmake .. \
> -DBUILD_TESTING=OFF -DPARAVIEW_ENABLE_CATALYST=ON -DPARAVIEW_ENABLE_PYTHON=ON \
> -DPARAVIEW_INSTALL_DEVELOPMENT_FILES=ON -DPARAVIEW_USE_MPI=ON \
> -DVTK_RENDERING_BACKEND=OpenGL2 -DVTK_USE_OFFSCREEN_EGL=ON \
> -DVTK_USE_X=OFF -DPARAVIEW_BUILD_QT_GUI=OFF \
> -DEGL_gldispatch_LIBRARY=<path_to_libGLdispatch.so.0> \
> -DEGL_INCLUDE_DIR=<path_to_EGL_includes> \
> -DCMAKE_INSTALL_PREFIX=<install_prefix>
>
> Everything then builds and installs correctly.
>
> But when I start a pvserver (with no X server launched) on the server
> where the data is stored and with a graphic card. I end up having the
> following issue in a ParaView pop-up:
>
> "
>
> OpenGL drivers on the server side don't support
>
> required OpenGL features for basic rendering.
>
> Remote rendering will be disabled.
>
>
> OpenGL Vendor: NVIDIA Corporation
>
> OpenGL Version: 4.5.0 NVIDIA 358.16
>
> OpenGL Renderer: Tesla K80/PCIe/SSE2
> "
>
> And then I tried to use volume rendering, but I end up with this error:
> "
> Some of the representations in this view require remote rendering which,
> however, is not available. Rendering may not work as expected.
> "
> And VR does not work.
>
> I managed to replicate this issue, with both a Nvidia Tesla K80 and GTX
> 470 with the 358.16 driver from NVidia on a Ubuntu 14.04.
>
> However, when I add the "--disable-xdisplay-test" option to the pvserver.
> I don't get the error regarding to OpenGL drivers and I am able to do
> remote rendering on the server side.
>
> I also tried adding the "?egl-device-index=0" instead of
> "--disable-xdisplay-test", but I am getting the OpenGL error.
>
> Is there something I missed in my ParaView build ?
> I guess I should be able to run the pvserver without the
> "--disable-xdisplay-test" option, isn't it ?
>
> Another last question, is the EGL internal rendering resolution available
> for modification or will it fit the current view of ParaView ? (e.g. for
> doing screenshots)
>
>
> Thanks in advance for the answers,
>
> Best regards,
> Alexandre Ancel
>
> --
> Alexandre Ancel
> Docteur, Ing?nieur de recherche / Phd, Research Engineer
> Cemosis <http://www.cemosis.fr> - alexandre.ancel at cemosis.fr
> Tel: +33 (0)3 68 8*5 02 06*
> IRMA - 7, rue Ren? Descartes
> 67 000 Strasbourg, France
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From alexandre.ancel at cemosis.fr  Thu Feb 11 11:13:47 2016
From: alexandre.ancel at cemosis.fr (Alexandre Ancel)
Date: Thu, 11 Feb 2016 17:13:47 +0100
Subject: [Paraview] EGL build of ParaView
In-Reply-To: <CADwGrVr9RFwnBYOmVhs-YqZ+iL_7OBbKFXg9pCKXu1KmrqpE4Q@mail.gmail.com>
References: <CADR2tx7a+oJyY=7aTwkL6eHkzFg9QxomzeCZ7ijN859WbHAu2g@mail.gmail.com>
 <CADwGrVr9RFwnBYOmVhs-YqZ+iL_7OBbKFXg9pCKXu1KmrqpE4Q@mail.gmail.com>
Message-ID: <CADR2tx6A9dUH4cZOwbHF+22805hP6k_y1rOJ+VpwQQ7RfYBj=Q@mail.gmail.com>

Hello Dan,

Regarding to the values of the variables, I have:

//No help, variable specified on the command line.
EGL_INCLUDE_DIR:UNINITIALIZED=/data/software/install/EGL/include

//Path to a library.
EGL_LIBRARY:FILEPATH=/usr/lib/x86_64-linux-gnu/libEGL.so

//No help, variable specified on the command line.
EGL_gldispatch_LIBRARY:UNINITIALIZED=/usr/lib/x86_64-linux-gnu/libGLdispatch.so.0

//Path to a library.
EGL_opengl_LIBRARY:FILEPATH=/usr/lib/x86_64-linux-gnu/libOpenGL.so

The libraries are OK (They come from the manual installation of the Nvidia
driver which should be at least 355 if I remember well). I have a 358.16.

I didn't previously saw that EGL_INCLUDE_DIR was marked as UNINITIALIZED,
however ParaView was built successfully with the previously mentioned
options.

I am just not sure about the libGLdispatch.so.0 library, as it is not a
symlink to a libGLdispatch.so.358.16.
When I do a "strings libGLdispatch.so.0", I have gl*NV functions, so I
guess it should be ok.

As I said before, remote rendering is working but only when I add
"--disable-xdisplay-test" to the pvserver.

Regards,

Alexandre Ancel

On Thu, Feb 11, 2016 at 4:28 PM, Dan Lipsa <dan.lipsa at kitware.com> wrote:

> Alexandre,
> Can you check
>
> EGL_INCLUDE_DIR
> EGL_LIBRARIES
>
> in CMakeCache.txt
>
> and make sure they point to the libraries that come with the NVidia driver.
>
> You will need:
> libEGL, libOpenGL and libGLdispatch
>
> On my machine nvidia libraries are inside
> /usr/lib32/nvidia-346. (My machine has an older driver that does not
> support EGL)
>
> What are whose values?
> Thanks,
> Dan
>
>
>
>
>
> On Thu, Feb 11, 2016 at 3:39 AM, Alexandre Ancel <
> alexandre.ancel at cemosis.fr> wrote:
>
>> Hello,
>>
>> I am trying to make the EGL build of ParaView work, but I am encountering
>> some issues.
>>
>> First, here is the configure line I used to build ParaView:
>>
>> cmake .. \
>> -DBUILD_TESTING=OFF -DPARAVIEW_ENABLE_CATALYST=ON -DPARAVIEW_ENABLE_PYTHON=ON \
>> -DPARAVIEW_INSTALL_DEVELOPMENT_FILES=ON -DPARAVIEW_USE_MPI=ON \
>> -DVTK_RENDERING_BACKEND=OpenGL2 -DVTK_USE_OFFSCREEN_EGL=ON \
>> -DVTK_USE_X=OFF -DPARAVIEW_BUILD_QT_GUI=OFF \
>> -DEGL_gldispatch_LIBRARY=<path_to_libGLdispatch.so.0> \
>> -DEGL_INCLUDE_DIR=<path_to_EGL_includes> \
>> -DCMAKE_INSTALL_PREFIX=<install_prefix>
>>
>> Everything then builds and installs correctly.
>>
>> But when I start a pvserver (with no X server launched) on the server
>> where the data is stored and with a graphic card. I end up having the
>> following issue in a ParaView pop-up:
>>
>> "
>>
>> OpenGL drivers on the server side don't support
>>
>> required OpenGL features for basic rendering.
>>
>> Remote rendering will be disabled.
>>
>>
>> OpenGL Vendor: NVIDIA Corporation
>>
>> OpenGL Version: 4.5.0 NVIDIA 358.16
>>
>> OpenGL Renderer: Tesla K80/PCIe/SSE2
>> "
>>
>> And then I tried to use volume rendering, but I end up with this error:
>> "
>> Some of the representations in this view require remote rendering which,
>> however, is not available. Rendering may not work as expected.
>> "
>> And VR does not work.
>>
>> I managed to replicate this issue, with both a Nvidia Tesla K80 and GTX
>> 470 with the 358.16 driver from NVidia on a Ubuntu 14.04.
>>
>> However, when I add the "--disable-xdisplay-test" option to the pvserver.
>> I don't get the error regarding to OpenGL drivers and I am able to do
>> remote rendering on the server side.
>>
>> I also tried adding the "?egl-device-index=0" instead of
>> "--disable-xdisplay-test", but I am getting the OpenGL error.
>>
>> Is there something I missed in my ParaView build ?
>> I guess I should be able to run the pvserver without the
>> "--disable-xdisplay-test" option, isn't it ?
>>
>> Another last question, is the EGL internal rendering resolution available
>> for modification or will it fit the current view of ParaView ? (e.g. for
>> doing screenshots)
>>
>>
>> Thanks in advance for the answers,
>>
>> Best regards,
>> Alexandre Ancel
>>
>> --
>> Alexandre Ancel
>> Docteur, Ing?nieur de recherche / Phd, Research Engineer
>> Cemosis <http://www.cemosis.fr> - alexandre.ancel at cemosis.fr
>> Tel: +33 (0)3 68 8*5 02 06*
>> IRMA - 7, rue Ren? Descartes
>> 67 000 Strasbourg, France
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>


-- 
Alexandre Ancel
Docteur, Ing?nieur de recherche / Phd, Research Engineer
Cemosis <http://www.cemosis.fr> - alexandre.ancel at cemosis.fr
Tel: +33 (0)3 68 8*5 02 06*
IRMA - 7, rue Ren? Descartes
67 000 Strasbourg, France
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From dan.lipsa at kitware.com  Thu Feb 11 11:33:05 2016
From: dan.lipsa at kitware.com (Dan Lipsa)
Date: Thu, 11 Feb 2016 11:33:05 -0500
Subject: [Paraview] EGL build of ParaView
In-Reply-To: <CADR2tx6A9dUH4cZOwbHF+22805hP6k_y1rOJ+VpwQQ7RfYBj=Q@mail.gmail.com>
References: <CADR2tx7a+oJyY=7aTwkL6eHkzFg9QxomzeCZ7ijN859WbHAu2g@mail.gmail.com>
 <CADwGrVr9RFwnBYOmVhs-YqZ+iL_7OBbKFXg9pCKXu1KmrqpE4Q@mail.gmail.com>
 <CADR2tx6A9dUH4cZOwbHF+22805hP6k_y1rOJ+VpwQQ7RfYBj=Q@mail.gmail.com>
Message-ID: <CADwGrVqY6EuJUUemx+X7Se=LjqbSedmMzY3CPstmDXVHNUyeDw@mail.gmail.com>

Alexandre,


On Thu, Feb 11, 2016 at 11:13 AM, Alexandre Ancel <
alexandre.ancel at cemosis.fr> wrote:

> Hello Dan,
>
> Regarding to the values of the variables, I have:
>
> //No help, variable specified on the command line.
> EGL_INCLUDE_DIR:UNINITIALIZED=/data/software/install/EGL/include
>
> //Path to a library.
> EGL_LIBRARY:FILEPATH=/usr/lib/x86_64-linux-gnu/libEGL.so
>
> //No help, variable specified on the command line.
>
> EGL_gldispatch_LIBRARY:UNINITIALIZED=/usr/lib/x86_64-linux-gnu/libGLdispatch.so.0
>
> //Path to a library.
> EGL_opengl_LIBRARY:FILEPATH=/usr/lib/x86_64-linux-gnu/libOpenGL.so
>
> The libraries are OK (They come from the manual installation of the Nvidia
> driver which should be at least 355 if I remember well). I have a 358.16.
>
> I didn't previously saw that EGL_INCLUDE_DIR was marked as UNINITIALIZED,
> however ParaView was built successfully with the previously mentioned
> options.
>
> I am just not sure about the libGLdispatch.so.0 library, as it is not a
> symlink to a libGLdispatch.so.358.16.
> When I do a "strings libGLdispatch.so.0", I have gl*NV functions, so I
> guess it should be ok.
>

Al this looks fine.


>
> As I said before, remote rendering is working but only when I add
> "--disable-xdisplay-test" to the pvserver.
>

I see. It seems your build works fine but we should have authomatically
pass that option and now show the option in ParaView at all.
When you run through EGL there is no X involved. Opening an X display as
this test does probably screws up things.

You can also try (with this option passed as you have done) to see what is
shown in:
Help, About, Connection Information, OpenGL Renderer.

It is interesting that I have not seen this problem. I tested on a machine
that was already running X. Maybe this made a difference.
I will file a bug report as it makes sense to disable the xdisplay test.

Dan
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From alexandre.ancel at cemosis.fr  Thu Feb 11 12:04:04 2016
From: alexandre.ancel at cemosis.fr (Alexandre Ancel)
Date: Thu, 11 Feb 2016 18:04:04 +0100
Subject: [Paraview] EGL build of ParaView
In-Reply-To: <CADwGrVqY6EuJUUemx+X7Se=LjqbSedmMzY3CPstmDXVHNUyeDw@mail.gmail.com>
References: <CADR2tx7a+oJyY=7aTwkL6eHkzFg9QxomzeCZ7ijN859WbHAu2g@mail.gmail.com>
 <CADwGrVr9RFwnBYOmVhs-YqZ+iL_7OBbKFXg9pCKXu1KmrqpE4Q@mail.gmail.com>
 <CADR2tx6A9dUH4cZOwbHF+22805hP6k_y1rOJ+VpwQQ7RfYBj=Q@mail.gmail.com>
 <CADwGrVqY6EuJUUemx+X7Se=LjqbSedmMzY3CPstmDXVHNUyeDw@mail.gmail.com>
Message-ID: <CADR2tx4kc0UzzGQufEgSAWU94inT1viRvKa_AkGMg=uvemXWFA@mail.gmail.com>

Indeed, when I use an ssh -Y for example with the EGL version of ParaView,
I end up having this error in the pvserver:
"
Waiting for client...
Connection URL: cs://irma-atlas:11111
Accepting connection(s): irma-atlas:11111
Client connected.
ERROR: In
/data/software/src/ParaView/ParaView-v5.0.0-source/VTK/Rendering/OpenGL2/vtkEGLRenderWindow.cxx,
line 315
vtkEGLRenderWindow (0x2efe490): Only EGL 1.4 and greater allows OpenGL as
client API. See eglBindAPI for more information.

ERROR: In
/data/software/src/ParaView/ParaView-v5.0.0-source/VTK/Rendering/OpenGL2/vtkOpenGLRenderWindow.cxx,
line 575
vtkEGLRenderWindow (0x2efe490): GLEW could not be initialized.
"
and ParaVIew crashes.
I noticed that at the beginning so now I make sure to have no DISPLAY
variable set.


Regarding to what is shown in:
Help, About, Connection Information, OpenGL Renderer

In the OpenGL Renderer section, I have the reference of the graphic card I
use, either the K80 or GTX 470. So it should be OK.


Additionaly, when I built ParaView, I didn't initially put the
-DPARAVIEW_BUILD_QT_GUI=OFF option, and I ended having errors with
XCreateWindow during the compilation, which seems normal as I used
-DVTK_USE_X=OFF.
Maybe the use of PARAVIEW_BUILD_QT_GUI=ON should be prevented when using
VTK_USE_X=OFF ? Or if it is already the case, I might have had a mixup in
my configuration.


In any case and if it might help someone else on this list, I wrote some
notes about how to make everything work together:
https://github.com/aancel/admin/wiki/Compile-ParaView-with-EGL-support-on-Ubuntu-14.04


Hope I could have been of some help,
Regards,

Alexandre Ancel

On Thu, Feb 11, 2016 at 5:33 PM, Dan Lipsa <dan.lipsa at kitware.com> wrote:

> Alexandre,
>
>
> On Thu, Feb 11, 2016 at 11:13 AM, Alexandre Ancel <
> alexandre.ancel at cemosis.fr> wrote:
>
>> Hello Dan,
>>
>> Regarding to the values of the variables, I have:
>>
>> //No help, variable specified on the command line.
>> EGL_INCLUDE_DIR:UNINITIALIZED=/data/software/install/EGL/include
>>
>> //Path to a library.
>> EGL_LIBRARY:FILEPATH=/usr/lib/x86_64-linux-gnu/libEGL.so
>>
>> //No help, variable specified on the command line.
>>
>> EGL_gldispatch_LIBRARY:UNINITIALIZED=/usr/lib/x86_64-linux-gnu/libGLdispatch.so.0
>>
>> //Path to a library.
>> EGL_opengl_LIBRARY:FILEPATH=/usr/lib/x86_64-linux-gnu/libOpenGL.so
>>
>> The libraries are OK (They come from the manual installation of the
>> Nvidia driver which should be at least 355 if I remember well). I have a
>> 358.16.
>>
>> I didn't previously saw that EGL_INCLUDE_DIR was marked as UNINITIALIZED,
>> however ParaView was built successfully with the previously mentioned
>> options.
>>
>> I am just not sure about the libGLdispatch.so.0 library, as it is not a
>> symlink to a libGLdispatch.so.358.16.
>> When I do a "strings libGLdispatch.so.0", I have gl*NV functions, so I
>> guess it should be ok.
>>
>
> Al this looks fine.
>
>
>>
>> As I said before, remote rendering is working but only when I add
>> "--disable-xdisplay-test" to the pvserver.
>>
>
> I see. It seems your build works fine but we should have authomatically
> pass that option and now show the option in ParaView at all.
> When you run through EGL there is no X involved. Opening an X display as
> this test does probably screws up things.
>
> You can also try (with this option passed as you have done) to see what is
> shown in:
> Help, About, Connection Information, OpenGL Renderer.
>
> It is interesting that I have not seen this problem. I tested on a machine
> that was already running X. Maybe this made a difference.
> I will file a bug report as it makes sense to disable the xdisplay test.
>
> Dan
>
>


-- 
Alexandre Ancel
Docteur, Ing?nieur de recherche / Phd, Research Engineer
Cemosis <http://www.cemosis.fr> - alexandre.ancel at cemosis.fr
Tel: +33 (0)3 68 8*5 02 06*
IRMA - 7, rue Ren? Descartes
67 000 Strasbourg, France
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From dan.lipsa at kitware.com  Thu Feb 11 13:34:04 2016
From: dan.lipsa at kitware.com (Dan Lipsa)
Date: Thu, 11 Feb 2016 13:34:04 -0500
Subject: [Paraview] EGL build of ParaView
In-Reply-To: <CADR2tx4kc0UzzGQufEgSAWU94inT1viRvKa_AkGMg=uvemXWFA@mail.gmail.com>
References: <CADR2tx7a+oJyY=7aTwkL6eHkzFg9QxomzeCZ7ijN859WbHAu2g@mail.gmail.com>
 <CADwGrVr9RFwnBYOmVhs-YqZ+iL_7OBbKFXg9pCKXu1KmrqpE4Q@mail.gmail.com>
 <CADR2tx6A9dUH4cZOwbHF+22805hP6k_y1rOJ+VpwQQ7RfYBj=Q@mail.gmail.com>
 <CADwGrVqY6EuJUUemx+X7Se=LjqbSedmMzY3CPstmDXVHNUyeDw@mail.gmail.com>
 <CADR2tx4kc0UzzGQufEgSAWU94inT1viRvKa_AkGMg=uvemXWFA@mail.gmail.com>
Message-ID: <CADwGrVq1CNksPTwuLkUhkxjS1wsoXcDMxTOTsqxQvUHysO4PLQ@mail.gmail.com>

Alexandre,
Thanks for the info.

I filed a bug report on disabling the xdisplay test.

http://www.vtk.org/Bug/view.php?id=15992

Best,
Dan

On Thu, Feb 11, 2016 at 12:04 PM, Alexandre Ancel <
alexandre.ancel at cemosis.fr> wrote:

> Indeed, when I use an ssh -Y for example with the EGL version of ParaView,
> I end up having this error in the pvserver:
> "
> Waiting for client...
> Connection URL: cs://irma-atlas:11111
> Accepting connection(s): irma-atlas:11111
> Client connected.
> ERROR: In
> /data/software/src/ParaView/ParaView-v5.0.0-source/VTK/Rendering/OpenGL2/vtkEGLRenderWindow.cxx,
> line 315
> vtkEGLRenderWindow (0x2efe490): Only EGL 1.4 and greater allows OpenGL as
> client API. See eglBindAPI for more information.
>
> ERROR: In
> /data/software/src/ParaView/ParaView-v5.0.0-source/VTK/Rendering/OpenGL2/vtkOpenGLRenderWindow.cxx,
> line 575
> vtkEGLRenderWindow (0x2efe490): GLEW could not be initialized.
> "
> and ParaVIew crashes.
> I noticed that at the beginning so now I make sure to have no DISPLAY
> variable set.
>
>
> Regarding to what is shown in:
> Help, About, Connection Information, OpenGL Renderer
>
> In the OpenGL Renderer section, I have the reference of the graphic card I
> use, either the K80 or GTX 470. So it should be OK.
>
>
> Additionaly, when I built ParaView, I didn't initially put the
> -DPARAVIEW_BUILD_QT_GUI=OFF option, and I ended having errors with
> XCreateWindow during the compilation, which seems normal as I used
> -DVTK_USE_X=OFF.
> Maybe the use of PARAVIEW_BUILD_QT_GUI=ON should be prevented when using
> VTK_USE_X=OFF ? Or if it is already the case, I might have had a mixup in
> my configuration.
>
>
> In any case and if it might help someone else on this list, I wrote some
> notes about how to make everything work together:
>
> https://github.com/aancel/admin/wiki/Compile-ParaView-with-EGL-support-on-Ubuntu-14.04
>
>
> Hope I could have been of some help,
> Regards,
>
> Alexandre Ancel
>
> On Thu, Feb 11, 2016 at 5:33 PM, Dan Lipsa <dan.lipsa at kitware.com> wrote:
>
>> Alexandre,
>>
>>
>> On Thu, Feb 11, 2016 at 11:13 AM, Alexandre Ancel <
>> alexandre.ancel at cemosis.fr> wrote:
>>
>>> Hello Dan,
>>>
>>> Regarding to the values of the variables, I have:
>>>
>>> //No help, variable specified on the command line.
>>> EGL_INCLUDE_DIR:UNINITIALIZED=/data/software/install/EGL/include
>>>
>>> //Path to a library.
>>> EGL_LIBRARY:FILEPATH=/usr/lib/x86_64-linux-gnu/libEGL.so
>>>
>>> //No help, variable specified on the command line.
>>>
>>> EGL_gldispatch_LIBRARY:UNINITIALIZED=/usr/lib/x86_64-linux-gnu/libGLdispatch.so.0
>>>
>>> //Path to a library.
>>> EGL_opengl_LIBRARY:FILEPATH=/usr/lib/x86_64-linux-gnu/libOpenGL.so
>>>
>>> The libraries are OK (They come from the manual installation of the
>>> Nvidia driver which should be at least 355 if I remember well). I have a
>>> 358.16.
>>>
>>> I didn't previously saw that EGL_INCLUDE_DIR was marked as
>>> UNINITIALIZED, however ParaView was built successfully with the previously
>>> mentioned options.
>>>
>>> I am just not sure about the libGLdispatch.so.0 library, as it is not a
>>> symlink to a libGLdispatch.so.358.16.
>>> When I do a "strings libGLdispatch.so.0", I have gl*NV functions, so I
>>> guess it should be ok.
>>>
>>
>> Al this looks fine.
>>
>>
>>>
>>> As I said before, remote rendering is working but only when I add
>>> "--disable-xdisplay-test" to the pvserver.
>>>
>>
>> I see. It seems your build works fine but we should have authomatically
>> pass that option and now show the option in ParaView at all.
>> When you run through EGL there is no X involved. Opening an X display as
>> this test does probably screws up things.
>>
>> You can also try (with this option passed as you have done) to see what
>> is shown in:
>> Help, About, Connection Information, OpenGL Renderer.
>>
>> It is interesting that I have not seen this problem. I tested on a
>> machine that was already running X. Maybe this made a difference.
>> I will file a bug report as it makes sense to disable the xdisplay test.
>>
>> Dan
>>
>>
>
>
> --
> Alexandre Ancel
> Docteur, Ing?nieur de recherche / Phd, Research Engineer
> Cemosis <http://www.cemosis.fr> - alexandre.ancel at cemosis.fr
> Tel: +33 (0)3 68 8*5 02 06*
> IRMA - 7, rue Ren? Descartes
> 67 000 Strasbourg, France
>
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From insley at anl.gov  Thu Feb 11 13:28:04 2016
From: insley at anl.gov (Insley, Joseph A.)
Date: Thu, 11 Feb 2016 18:28:04 +0000
Subject: [Paraview] pv5.0 multi-page tiff in parallel
Message-ID: <5441B291-C603-4D4D-B16D-06F3FD916D63@anl.gov>

Hi,

I?ve been looking at loading tiffs as volumes using pv5.0 and am running into trouble doing this in parallel.

Loading a stack of tiff files as a volume works great, both serially and in parallel.  And I can load a multi-page tiff as a volume using a single pvserver just fine.  But when I run the pvserver in parallel and try to load a multi-page tiff pv crashes while trying to load.  No error messages are given (beyond the usual mpi errors about one of the processes terminating badly).

I?m wondering if anyone else has had success trying to do this?

Thanks
joe

===================================================
joseph a. insley                                                          insley at anl.gov<mailto:insley at anl.gov>
argonne leadership computing facility                       (630) 252-5649
argonne national laboratory






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From utkarsh.ayachit at kitware.com  Thu Feb 11 14:28:14 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Thu, 11 Feb 2016 14:28:14 -0500
Subject: [Paraview] pv5.0 multi-page tiff in parallel
In-Reply-To: <5441B291-C603-4D4D-B16D-06F3FD916D63@anl.gov>
References: <5441B291-C603-4D4D-B16D-06F3FD916D63@anl.gov>
Message-ID: <CADHSJjC67HGeS-Jz-_SFHSuq3H-S0MSmHFSrURfM3W3NNDrGbA@mail.gmail.com>

Joe,

Do you have a sample dataset to share? It's possible there's a bug in
the multipage seek code when dealing with sub extents.

Utkarsh

On Thu, Feb 11, 2016 at 1:28 PM, Insley, Joseph A. <insley at anl.gov> wrote:
> Hi,
>
> I?ve been looking at loading tiffs as volumes using pv5.0 and am running
> into trouble doing this in parallel.
>
> Loading a stack of tiff files as a volume works great, both serially and in
> parallel.  And I can load a multi-page tiff as a volume using a single
> pvserver just fine.  But when I run the pvserver in parallel and try to load
> a multi-page tiff pv crashes while trying to load.  No error messages are
> given (beyond the usual mpi errors about one of the processes terminating
> badly).
>
> I?m wondering if anyone else has had success trying to do this?
>
> Thanks
> joe
>
> ===================================================
> joseph a. insley
> insley at anl.gov
> argonne leadership computing facility                       (630) 252-5649
> argonne national laboratory
>
>
>
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>

From utkarsh.ayachit at kitware.com  Thu Feb 11 14:29:55 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Thu, 11 Feb 2016 14:29:55 -0500
Subject: [Paraview] Migrating from ParaView 4.0.1 to 5.0.0
In-Reply-To: <B6899AF31CC24E4BB593B7FFD4C1DE811907E06A@LLE2K10-MBX01.mitll.ad.local>
References: <B6899AF31CC24E4BB593B7FFD4C1DE811907E06A@LLE2K10-MBX01.mitll.ad.local>
Message-ID: <CADHSJjB1MsXt4qZLigK-2+MTcKzRJ9__KKAsgp_vbK4=PJQvTA@mail.gmail.com>

Vlad,

Since 4.0 is very old, can you try comparing with 4.4 as well? Let's
see if the slow down relates to changes to the rendering backend in
ParaView 5.0 or not.

Utkarsh

On Wed, Feb 10, 2016 at 9:56 PM, Liberman, Vladimir - 0881 - MITLL
<vlad at ll.mit.edu> wrote:
> I just upgraded from ver. 4.0.1 to 5.0.0. I am reading the same data set, a
> frame sequence of AVS_UCD files and  I am trying to play a movie.
>
> The playing speed in 5.0.0 is much slower than in 4.0.1, at least two times
> slower. I am not using MPI option in either case. What settings should I
> look for to speed up the 5.0.0 performance?
>
> Thanks,
>
> Vlad
>
>
>
> Staff  Member, Chemical, Microsystem, and Nanoscale Technologies Group
> MIT Lincoln Laboratory               E-mail: vlad at ll.mit.edu
> Room C-137                              Phone: 781 981 3706
> 244 Wood St.                            Fax:     781 981 4983
> Lexington, MA 02420-9108
>
> http://www.ll.mit.edu/mission/electronics/cmnt/bios/liberman-v.html
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>

From hitcaozx at gmail.com  Thu Feb 11 16:09:01 2016
From: hitcaozx at gmail.com (=?UTF-8?B?5pu55pm66YCJ?=)
Date: Thu, 11 Feb 2016 16:09:01 -0500
Subject: [Paraview] Question about probe point data
Message-ID: <CANO2j4Oxsv+6uGyV0J+0N0A+dz6bt+zGjm--WwWDJ3jwqJXWhA@mail.gmail.com>

Hello,
I am trying to probe point based data with Paraview.
What I did is:
1) Create probe points with "ProbeLocations"
2) Then use "Resample With Dataset", choose input as the data that I have
already had and source as "ProbeLocations" that I created in the previous
step.

The trouble that i have is:  All field data including coordinates are all
zero.

Could someone help me out?

Thank you very much!

Orman
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From vlad at ll.mit.edu  Thu Feb 11 17:07:40 2016
From: vlad at ll.mit.edu (Liberman, Vladimir - 0881 - MITLL)
Date: Thu, 11 Feb 2016 22:07:40 +0000
Subject: [Paraview] Migrating from ParaView 4.0.1 to 5.0.0
In-Reply-To: <CADHSJjB1MsXt4qZLigK-2+MTcKzRJ9__KKAsgp_vbK4=PJQvTA@mail.gmail.com>
References: <B6899AF31CC24E4BB593B7FFD4C1DE811907E06A@LLE2K10-MBX01.mitll.ad.local>
 <CADHSJjB1MsXt4qZLigK-2+MTcKzRJ9__KKAsgp_vbK4=PJQvTA@mail.gmail.com>
Message-ID: <B6899AF31CC24E4BB593B7FFD4C1DE811907E321@LLE2K10-MBX01.mitll.ad.local>

Version 4.4 is just as fast as version 4.0

By contrast, version 5.0 is three to four x slower, at least.

VL

Staff  Member, Chemical, Microsystem, and Nanoscale Technologies Group
MIT Lincoln Laboratory               E-mail: vlad at ll.mit.edu
Room C-137                              Phone: 781 981 3706
244 Wood St.                            Fax:     781 981 4983
Lexington, MA 02420-9108
http://www.ll.mit.edu/mission/electronics/cmnt/bios/liberman-v.html

-----Original Message-----
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
Sent: Thursday, February 11, 2016 14:30
To: Liberman, Vladimir - 0881 - MITLL
Cc: paraview at paraview.org
Subject: Re: [Paraview] Migrating from ParaView 4.0.1 to 5.0.0

Vlad,

Since 4.0 is very old, can you try comparing with 4.4 as well? Let's see if 
the slow down relates to changes to the rendering backend in ParaView 5.0 or 
not.

Utkarsh

On Wed, Feb 10, 2016 at 9:56 PM, Liberman, Vladimir - 0881 - MITLL 
<vlad at ll.mit.edu> wrote:
> I just upgraded from ver. 4.0.1 to 5.0.0. I am reading the same data
> set, a frame sequence of AVS_UCD files and  I am trying to play a movie.
>
> The playing speed in 5.0.0 is much slower than in 4.0.1, at least two
> times slower. I am not using MPI option in either case. What settings
> should I look for to speed up the 5.0.0 performance?
>
> Thanks,
>
> Vlad
>
>
>
> Staff  Member, Chemical, Microsystem, and Nanoscale Technologies Group
> MIT Lincoln Laboratory               E-mail: vlad at ll.mit.edu
> Room C-137                              Phone: 781 981 3706
> 244 Wood St.                            Fax:     781 981 4983
> Lexington, MA 02420-9108
>
> http://www.ll.mit.edu/mission/electronics/cmnt/bios/liberman-v.html
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From utkarsh.ayachit at kitware.com  Thu Feb 11 17:13:12 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Thu, 11 Feb 2016 17:13:12 -0500
Subject: [Paraview] Migrating from ParaView 4.0.1 to 5.0.0
In-Reply-To: <B6899AF31CC24E4BB593B7FFD4C1DE811907E321@LLE2K10-MBX01.mitll.ad.local>
References: <B6899AF31CC24E4BB593B7FFD4C1DE811907E06A@LLE2K10-MBX01.mitll.ad.local>
 <CADHSJjB1MsXt4qZLigK-2+MTcKzRJ9__KKAsgp_vbK4=PJQvTA@mail.gmail.com>
 <B6899AF31CC24E4BB593B7FFD4C1DE811907E321@LLE2K10-MBX01.mitll.ad.local>
Message-ID: <CADHSJjCAtokpevRz_T3cZVg+kv-LHz-DkxVvQ7ECcmGZeGy+Ww@mail.gmail.com>

I suspect this is an OPenGL issue. Can you post what the About dialog
in ParaView 5.0 says for OpenGL version?

Utkarsh

On Thu, Feb 11, 2016 at 5:07 PM, Liberman, Vladimir - 0881 - MITLL
<vlad at ll.mit.edu> wrote:
> Version 4.4 is just as fast as version 4.0
>
> By contrast, version 5.0 is three to four x slower, at least.
>
> VL
>
> Staff  Member, Chemical, Microsystem, and Nanoscale Technologies Group
> MIT Lincoln Laboratory               E-mail: vlad at ll.mit.edu
> Room C-137                              Phone: 781 981 3706
> 244 Wood St.                            Fax:     781 981 4983
> Lexington, MA 02420-9108
> http://www.ll.mit.edu/mission/electronics/cmnt/bios/liberman-v.html
>
> -----Original Message-----
> From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
> Sent: Thursday, February 11, 2016 14:30
> To: Liberman, Vladimir - 0881 - MITLL
> Cc: paraview at paraview.org
> Subject: Re: [Paraview] Migrating from ParaView 4.0.1 to 5.0.0
>
> Vlad,
>
> Since 4.0 is very old, can you try comparing with 4.4 as well? Let's see if
> the slow down relates to changes to the rendering backend in ParaView 5.0 or
> not.
>
> Utkarsh
>
> On Wed, Feb 10, 2016 at 9:56 PM, Liberman, Vladimir - 0881 - MITLL
> <vlad at ll.mit.edu> wrote:
>> I just upgraded from ver. 4.0.1 to 5.0.0. I am reading the same data
>> set, a frame sequence of AVS_UCD files and  I am trying to play a movie.
>>
>> The playing speed in 5.0.0 is much slower than in 4.0.1, at least two
>> times slower. I am not using MPI option in either case. What settings
>> should I look for to speed up the 5.0.0 performance?
>>
>> Thanks,
>>
>> Vlad
>>
>>
>>
>> Staff  Member, Chemical, Microsystem, and Nanoscale Technologies Group
>> MIT Lincoln Laboratory               E-mail: vlad at ll.mit.edu
>> Room C-137                              Phone: 781 981 3706
>> 244 Wood St.                            Fax:     781 981 4983
>> Lexington, MA 02420-9108
>>
>> http://www.ll.mit.edu/mission/electronics/cmnt/bios/liberman-v.html
>>
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>

From djortley at gmail.com  Thu Feb 11 17:13:53 2016
From: djortley at gmail.com (David Ortley)
Date: Thu, 11 Feb 2016 15:13:53 -0700
Subject: [Paraview] Parallel unfriendly filters?
In-Reply-To: <CADwGrVri+y+htcxGTBTssLEkH+efEzxFKmZuBpwNTg1mipVzhA@mail.gmail.com>
References: <D2DE49C2.2C9C1%kmorel@sandia.gov>
 <CAOmyp+Sj-jn6sstfCCtuq=g8vFjcSkv+y2xtPw7AWcXOzkmHag@mail.gmail.com>
 <CADwGrVri+y+htcxGTBTssLEkH+efEzxFKmZuBpwNTg1mipVzhA@mail.gmail.com>
Message-ID: <CAOmyp+TXNfyDzi=YBjsb5Zqvghm4Qfi7uZ60frWQYJatZ5RiWQ@mail.gmail.com>

Just an update.

Kenneth, I think I understand the logic of what you're saying.  I have a
large calculation that I'm working on this week that will require some
visualization.  I'll update this thread with my progress as I get the
chance.


-David Ortley

On Tue, Feb 9, 2016 at 7:04 AM, Dan Lipsa <dan.lipsa at kitware.com> wrote:

>
>>
>> Cell Data to Point Data is the only way I know of to activate the contour
>> filter for silo files.  The results are stored in cell arrays, which
>> apparently don't activate the contour filter.  I stumbled upon using Cell
>> Data to Point Data by accident, so if there's a better way to do this, I'm
>> open to it.
>>
>
> I see. I would go with Ken's suggestions, then.  I would also create a new
> array called  'vtkGhostType' from 'avtGhostZones'. You could do that
> instead of thresholding out the ghost zones. VTK knows about vtkGhostType
> name. I think you could leave those in as they should not be rendered.
>
> You can create the new array from avtGhostZone using the Calculator filter.
>
> Dan
>
>
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From vlad at ll.mit.edu  Thu Feb 11 17:20:30 2016
From: vlad at ll.mit.edu (Liberman, Vladimir - 0881 - MITLL)
Date: Thu, 11 Feb 2016 22:20:30 +0000
Subject: [Paraview] Migrating from ParaView 4.0.1 to 5.0.0
In-Reply-To: <CADHSJjCAtokpevRz_T3cZVg+kv-LHz-DkxVvQ7ECcmGZeGy+Ww@mail.gmail.com>
References: <B6899AF31CC24E4BB593B7FFD4C1DE811907E06A@LLE2K10-MBX01.mitll.ad.local>
 <CADHSJjB1MsXt4qZLigK-2+MTcKzRJ9__KKAsgp_vbK4=PJQvTA@mail.gmail.com>
 <B6899AF31CC24E4BB593B7FFD4C1DE811907E321@LLE2K10-MBX01.mitll.ad.local>
 <CADHSJjCAtokpevRz_T3cZVg+kv-LHz-DkxVvQ7ECcmGZeGy+Ww@mail.gmail.com>
Message-ID: <B6899AF31CC24E4BB593B7FFD4C1DE811907E347@LLE2K10-MBX01.mitll.ad.local>

Version	5.0.0 64-bit
Qt Version	4.8.4
Architecture	64
Embedded Python	On
Python Library Path	C:\Program Files\ParaView 5.0.0\bin\lib
Python Library Version	2.7.3 (default, Apr  9 2015, 15:02:17) [MSC v.1500 64 
bit (AMD64)]
Python Numpy Support	On
Python Numpy Path	C:\Program Files\ParaView 5.0.0\bin\lib\site-packages\numpy
Python Numpy Version		1.8.1
Python Matplotlib Support	On
Python Matplotlib Path	C:\Program Files\ParaView 
5.0.0\bin\lib\site-packages\matplotlib
Python Matplotlib Version	1.1.1
Python Testing	Off
MPI Enabled	Off
Disable Registry	Off
OpenGL Vendor	Intel
OpenGL Version	3.3.0 - Build 8.15.10.2712
OpenGL Renderer	Intel(R) HD Graphics 4000



Staff  Member, Chemical, Microsystem, and Nanoscale Technologies Group
MIT Lincoln Laboratory               E-mail: vlad at ll.mit.edu
Room C-137                              Phone: 781 981 3706
244 Wood St.                            Fax:     781 981 4983
Lexington, MA 02420-9108
http://www.ll.mit.edu/mission/electronics/cmnt/bios/liberman-v.html


-----Original Message-----
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
Sent: Thursday, February 11, 2016 17:13
To: Liberman, Vladimir - 0881 - MITLL
Cc: paraview at paraview.org
Subject: Re: [Paraview] Migrating from ParaView 4.0.1 to 5.0.0

I suspect this is an OPenGL issue. Can you post what the About dialog in 
ParaView 5.0 says for OpenGL version?

Utkarsh

On Thu, Feb 11, 2016 at 5:07 PM, Liberman, Vladimir - 0881 - MITLL 
<vlad at ll.mit.edu> wrote:
> Version 4.4 is just as fast as version 4.0
>
> By contrast, version 5.0 is three to four x slower, at least.
>
> VL
>
> Staff  Member, Chemical, Microsystem, and Nanoscale Technologies Group
> MIT Lincoln Laboratory               E-mail: vlad at ll.mit.edu
> Room C-137                              Phone: 781 981 3706
> 244 Wood St.                            Fax:     781 981 4983
> Lexington, MA 02420-9108
> http://www.ll.mit.edu/mission/electronics/cmnt/bios/liberman-v.html
>
> -----Original Message-----
> From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
> Sent: Thursday, February 11, 2016 14:30
> To: Liberman, Vladimir - 0881 - MITLL
> Cc: paraview at paraview.org
> Subject: Re: [Paraview] Migrating from ParaView 4.0.1 to 5.0.0
>
> Vlad,
>
> Since 4.0 is very old, can you try comparing with 4.4 as well? Let's
> see if the slow down relates to changes to the rendering backend in
> ParaView 5.0 or not.
>
> Utkarsh
>
> On Wed, Feb 10, 2016 at 9:56 PM, Liberman, Vladimir - 0881 - MITLL
> <vlad at ll.mit.edu> wrote:
>> I just upgraded from ver. 4.0.1 to 5.0.0. I am reading the same data
>> set, a frame sequence of AVS_UCD files and  I am trying to play a movie.
>>
>> The playing speed in 5.0.0 is much slower than in 4.0.1, at least two
>> times slower. I am not using MPI option in either case. What settings
>> should I look for to speed up the 5.0.0 performance?
>>
>> Thanks,
>>
>> Vlad
>>
>>
>>
>> Staff  Member, Chemical, Microsystem, and Nanoscale Technologies Group
>> MIT Lincoln Laboratory               E-mail: vlad at ll.mit.edu
>> Room C-137                              Phone: 781 981 3706
>> 244 Wood St.                            Fax:     781 981 4983
>> Lexington, MA 02420-9108
>>
>> http://www.ll.mit.edu/mission/electronics/cmnt/bios/liberman-v.html
>>
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
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From insley at anl.gov  Thu Feb 11 17:27:49 2016
From: insley at anl.gov (Insley, Joseph A.)
Date: Thu, 11 Feb 2016 22:27:49 +0000
Subject: [Paraview] pv5.0 multi-page tiff in parallel
In-Reply-To: <CADHSJjC67HGeS-Jz-_SFHSuq3H-S0MSmHFSrURfM3W3NNDrGbA@mail.gmail.com>
References: <5441B291-C603-4D4D-B16D-06F3FD916D63@anl.gov>
 <CADHSJjC67HGeS-Jz-_SFHSuq3H-S0MSmHFSrURfM3W3NNDrGbA@mail.gmail.com>
Message-ID: <31E850AB-CC73-49D6-B874-E975BD29365F@anl.gov>

Utkarsh,

Thanks for looking at this.  I am checking with my user regarding a dataset that can be shared.  I will get back to you as soon as I hear from them, likely off list.

Thanks
joe

> On Feb 11, 2016, at 1:28 PM, Utkarsh Ayachit <utkarsh.ayachit at kitware.com> wrote:
> 
> Joe,
> 
> Do you have a sample dataset to share? It's possible there's a bug in
> the multipage seek code when dealing with sub extents.
> 
> Utkarsh
> 
> On Thu, Feb 11, 2016 at 1:28 PM, Insley, Joseph A. <insley at anl.gov> wrote:
>> Hi,
>> 
>> I?ve been looking at loading tiffs as volumes using pv5.0 and am running
>> into trouble doing this in parallel.
>> 
>> Loading a stack of tiff files as a volume works great, both serially and in
>> parallel.  And I can load a multi-page tiff as a volume using a single
>> pvserver just fine.  But when I run the pvserver in parallel and try to load
>> a multi-page tiff pv crashes while trying to load.  No error messages are
>> given (beyond the usual mpi errors about one of the processes terminating
>> badly).
>> 
>> I?m wondering if anyone else has had success trying to do this?
>> 
>> Thanks
>> joe
>> 
>> ===================================================
>> joseph a. insley
>> insley at anl.gov
>> argonne leadership computing facility                       (630) 252-5649
>> argonne national laboratory
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> _______________________________________________
>> Powered by www.kitware.com
>> 
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>> 
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>> 
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>> 
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>> 


From berk.geveci at kitware.com  Fri Feb 12 10:18:56 2016
From: berk.geveci at kitware.com (Berk Geveci)
Date: Fri, 12 Feb 2016 10:18:56 -0500
Subject: [Paraview] ANN: CFP - Eurographics 2016 Symposium on Parallel,
 Graphics and, Visualization (EGPGV 2016)
Message-ID: <CAE32kpWiMVq_nf-qwB=PLw1LjFYH7BNmmfW-V1i0-rijG-u0jw@mail.gmail.com>

[We apologize if you receive multiple copies of this message.]


Eurographics 2016 Symposium on Parallel Graphics and Visualization
(EGPGV 2016)
=========================================================================
June 6-7, 2016, Groningen, the Netherlands
Co-located with EuroVis 2016
www.egpgv.org



Call for Papers
================

The importance of parallel computing is increasing rapidly with the
ubiquitous availability of multi-core CPUs, GPUs, and cluster systems.
Computationally demanding and data-intensive applications in graphics
and visualization are strongly affected by this trend and require novel
efficient parallel solutions. The aim of this symposium is to foster the
exchange of experiences and knowledge exploiting and defining new trends
in parallel graphics and visualization.

The proceedings of the EGPGV Symposium will be published in the
Eurographics Proceedings Series and in the Eurographics Digital Library.
Best papers from the EGPGV symposium will be invited to submit an
extended journal version to IEEE Transactions on Visualization and
Computer Graphics.

Focusing on parallel computing, the symposium seeks papers on graphics
and visualization techniques, data structures, algorithms, and systems for:

- large-data
- clusters
- (multi-)GPU computing, and heterogeneous, hybrid architectures
- out-of-core
- hybrid distributed and shared memory architectures
- grid and cloud environments

In particular the symposium topics include:

- computationally and data intensive rendering
- scientific visualization (volume rendering, flow and tensor visualization)
- information visualization and visual analytics
- simulations for virtual environments (physics-based animation,
collision detection, acoustics)
- mesh processing, level-of-detail, and geometric methods
- visual computing (image- and video-based rendering, image processing
and exploitation, segmentation)
- scheduling, memory management and data coherence
- large and high resolution displays, virtual environments
- scientific, engineering, and industrial applications



Important Dates
=================

Paper Submission: February 19, 2016
Author Notification: April 1, 2016
Camera-Ready papers: April 15, 2016
Symposium: June 6-7, 2016


Submission instructions
========================

You are invited to submit original and unpublished research works. Full
papers are expected to be eight to ten (8-10) pages in length, with the
final length appropriate to the contribution of the paper. Submissions
are to be formatted along the Eurographics paper publication guidelines.

We expect that the submissions will clearly discuss the novel and
significant contributions as well as related work in the field. Authors
must highlight how their contributions differ and advance the state of
the art in parallel graphics and visualization. The full paper and all
supplementary material must be submitted via the PCS online system.

Additional submission details will be announced shortly on egpgv.org.



Symposium Chair
=================

Alexandru Telea, University of Groningen, the Netherlands

Program Chairs
===============

Wes Bethel, Lawrence Berkeley National Laboratory, USA
Enrico Gobbetti, CRS4, Italy


Program Committee
==================

Marco Ament, Karlsruhe Institute of Technology, Germany
Ulf Assarsson, Chalmers University, Sweden
Janine Bennett, SANDIA Labs, USA
Hank Childs, Lawrence Berkeley National Laboratory, USA
Kurt Debattista, University of Warwick, UK
Stefan Eilemann, ?cole Polytechnique F?d?rale de Lausanne, Switzerland
Elmar Eisemann, TU Delft, the Netherlands
Kelly Gaither, University Texas/Austin, USA
Christoph Garth, University of Kaiserslautern, Germany
Berk Geveci, Kitware, USA
Michael Guthe, University of Bayreuth, Germany
Andrei Jalba, TU Eindhoven, the Netherlands
Jens Kr?ger, University Duisburg-Essen, Germany
Torsten Kuhlen, RWTH Aachen University, Germany
Fabio Marton, CRS4, Italy
Patrick McCormick, Los Alamos National Laboratory, USA
Kenneth Moreland, Sandia National Laboratories, USA
Renato Pajarola, University of Z?rich, Switzerland
Bruno Raffin, INRIA Grenoble, France
Filip Sadlo, University of Heidelberg, Germany
Daniel Weiskopf, University of Stuttgart, Germany
Michael Wimmer, Technische Universit?t Wien, Austria
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From alexandre.ancel at cemosis.fr  Fri Feb 12 12:23:11 2016
From: alexandre.ancel at cemosis.fr (Alexandre Ancel)
Date: Fri, 12 Feb 2016 18:23:11 +0100
Subject: [Paraview] ParaView 5.0.0 with Catalyst: OpenGL2 backend in server,
	not in client
Message-ID: <CADR2tx4+DkLZXVBRF_Y=OExXVB=BnNSMaBZDOLBbCJLyzLqHbQ@mail.gmail.com>

Hello,

A word about the context: I am working on a library that uses Catalyst to
do Live visualization with ParaView. In this library, I just create a proxy
to a PVTrivialProducer and then set its output to send the data
(vtkUnstructuredGrid) to ParaView. This part is working very well.

I built the 5.0.0 version of ParaView on our data server with the OpenGL2
backend enabled, but when I built the 5.0.0 version of ParaView on my
client with OS X (I needed the developement headers), I noticed that I
forgot to add the option to enable the new OpenGL backend:
-DVTK_RENDERING_BACKEND=OpenGL2. So I ended up having version 1.4 for
OpenGL in this version.

When I tried to use our application with Catalyst, everything worked fine,
until I wanted to visualize the data extract from the proxy in the ParaView
interface.
ParaView then crashed with the following error:
"
ERROR: In
/tmp/ParaView-v5.0.0-source/ParaViewCore/ServerImplementation/Core/vtkSIProxy.cxx,
line 310
vtkSISourceProxy (0x4aefb50): Failed to create
vtkPointGaussianRepresentation. Aborting for debugging purposes.

Aborted
"

Looking at the proxy definition in
ParaViewCore/ServerManager/SMApplication/Resources/, I see that there is a
proxy for vtkPointGaussianRepresentation in proxies_opengl2.xml, but not in
proxies_opengl1.xml.

Am I getting an expected behavior here due to the option I forgot ?


Note that I also have the standard pre-packaged version of ParaView (with
the OpenGL2 backend and OpenGL v4.1) installed on OS X and I don't get the
previous issue and everything is ok.

In summary and with version 5.0.0 for everything:
ParaView (No OpenGL2) -> pvserver (OpenGL2) : causes a crash
ParaView (OpenGL2) -> pvserver (OpenGL2) : is OK

What do you think about checking the version of the OpenGL backend when
connecting to a pv*server and see if they match ?
And possibly display a message similar to the one displayed, when ParaView
connects to a different version of pvserver (e.g. when a client in 4.4.0 to
a server in 5.0.0)


Best regards,
Alexandre Ancel


-- 
Alexandre Ancel
Docteur, Ing?nieur de recherche / Phd, Research Engineer
Cemosis <http://www.cemosis.fr> - alexandre.ancel at cemosis.fr
Tel: +33 (0)3 68 8*5 02 06*
IRMA - 7, rue Ren? Descartes
67 000 Strasbourg, France
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From kmorel at sandia.gov  Fri Feb 12 12:40:21 2016
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Fri, 12 Feb 2016 17:40:21 +0000
Subject: [Paraview] Question about probe point data
Message-ID: <D2E364B0.2CD95%kmorel@sandia.gov>

The "Probe Location" and the "Resample With Dataset" filters actually use the same code underneath the covers. The only difference is how the geometry source is inputted (internally generated points for "Probe Location" and another dataset for "Resample With Dataset"). Also "Probe Location" is marked to by default show the results in a table view. However, you can show the results of "Probe Location" in a 3D view as well. Just select the 3D view and turn on its visibility.

Anyway, the point of all that is that it should be unnecessary for you to run the "Resample With Dataset" filter. You should get the same data from the output of the "Probe Locations" filter.

If all the field data in the output from "Probe Locations" are zero, then there is some reason why the filter could not find field data at the selected points. Once common problem is that the points are not actually located within the volume of your data. If your input data is actually a surface, then this is likely as it is hard to place points exactly on the surface. Another cause for problems that recently came up on the mailing list is issues with using an unstructured grid dataset that has voxel-type cells in it. The thread is captured here: http://markmail.org/message/t5vbs7opn43wtkdw.

-Ken

From: ParaView <paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>> on behalf of ??? <hitcaozx at gmail.com<mailto:hitcaozx at gmail.com>>
Date: Thursday, February 11, 2016 at 2:09 PM
To: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] [Paraview] Question about probe point data

Hello,
I am trying to probe point based data with Paraview.
What I did is:
1) Create probe points with "ProbeLocations"
2) Then use "Resample With Dataset", choose input as the data that I have already had and source as "ProbeLocations" that I created in the previous step.

The trouble that i have is:  All field data including coordinates are all zero.

Could someone help me out?

Thank you very much!

Orman
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From hitcaozx at gmail.com  Fri Feb 12 12:58:50 2016
From: hitcaozx at gmail.com (=?UTF-8?B?5pu55pm66YCJ?=)
Date: Fri, 12 Feb 2016 12:58:50 -0500
Subject: [Paraview] Question about probe point data
In-Reply-To: <D2E364B0.2CD95%kmorel@sandia.gov>
References: <D2E364B0.2CD95%kmorel@sandia.gov>
Message-ID: <CANO2j4MyCzkT1XQJ2-9DQ9jnh0L4U3isrGszWuaFRnmy82xcAw@mail.gmail.com>

Thank you for your help.
1) As you said, it is not necessary to use "Resample With Dataset" filter.
Just "Probe Location" is enough.
2) I figured out why I got all zeros: because the input data I am using is
in .h5part format and they are just points data., no surface, no grid, no
volume.
3) The way to overcome this issue is use Delaunay3D to generate grid. Then
use "Probe Location".
Hope this will help someone who also has similar problems.


2016-02-12 12:40 GMT-05:00 Moreland, Kenneth <kmorel at sandia.gov>:

> The "Probe Location" and the "Resample With Dataset" filters actually use
> the same code underneath the covers. The only difference is how the
> geometry source is inputted (internally generated points for "Probe
> Location" and another dataset for "Resample With Dataset"). Also "Probe
> Location" is marked to by default show the results in a table view.
> However, you can show the results of "Probe Location" in a 3D view as well.
> Just select the 3D view and turn on its visibility.
>
> Anyway, the point of all that is that it should be unnecessary for you to
> run the "Resample With Dataset" filter. You should get the same data from
> the output of the "Probe Locations" filter.
>
> If all the field data in the output from "Probe Locations" are zero, then
> there is some reason why the filter could not find field data at the
> selected points. Once common problem is that the points are not actually
> located within the volume of your data. If your input data is actually a
> surface, then this is likely as it is hard to place points exactly on the
> surface. Another cause for problems that recently came up on the mailing
> list is issues with using an unstructured grid dataset that has voxel-type
> cells in it. The thread is captured here:
> http://markmail.org/message/t5vbs7opn43wtkdw.
>
> -Ken
>
> From: ParaView <paraview-bounces at paraview.org> on behalf of ??? <
> hitcaozx at gmail.com>
> Date: Thursday, February 11, 2016 at 2:09 PM
> To: "paraview at paraview.org" <paraview at paraview.org>
> Subject: [EXTERNAL] [Paraview] Question about probe point data
>
> Hello,
> I am trying to probe point based data with Paraview.
> What I did is:
> 1) Create probe points with "ProbeLocations"
> 2) Then use "Resample With Dataset", choose input as the data that I have
> already had and source as "ProbeLocations" that I created in the previous
> step.
>
> The trouble that i have is:  All field data including coordinates are all
> zero.
>
> Could someone help me out?
>
> Thank you very much!
>
> Orman
>
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From kmorel at sandia.gov  Fri Feb 12 13:32:16 2016
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Fri, 12 Feb 2016 18:32:16 +0000
Subject: [Paraview] Adding time steps to a data set
Message-ID: <D2E370C4.2CDCD%kmorel@sandia.gov>

Miguel,

As suggested by Sam, ParaView relies on the time code in the Exodus files to determine which time is valid. You can use the file sequence naming convention you state to load a time series of files (to, for example, support a changing mesh). However, each file must have a unique time value or else the reader will discard all but one as duplicates. There is an open bug (http://www.paraview.org/Bug/view.php?id=15967) to add an option to ignore the time value in an Exodus file.

-Ken


From: ParaView <paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>> on behalf of Samuel Key <samuelkey at bresnan.net<mailto:samuelkey at bresnan.net>>
Date: Wednesday, February 10, 2016 at 6:48 PM
To: paraview <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] Re: [Paraview] Adding time steps to a data set

Miguel,

The ExodusI/ExodusII database has from its beginning supported multiple time steps. However, it is structured with a one-time write of the time=0.0 mesh data, and then successive point, cell and global (aka 'domain') datum sets written time step after time step. If in the optimization, the structure for the mesh has been altered, then the approach you used up to now may be your only answer.

If the mesh structure has stayed the same from optimization step to optimization step and you have saved the optimization changes as point displacements, and if you have access to source coding, you might be able to repeat the optimization steps and write out into a single ExodusI/ExodusII database the sequence of optimization steps as time steps appended to the to the database. I am not in a position to tell you the subroutine calls needed to successively close and open an ExodusI/ExodusII database. You might find that information here:

http://gsjaardema.github.io/seacas/html/index.html

Sam Key


On 2/10/2016 11:50 AM, Salazar De Troya, Miguel wrote:
Hello

I have several exodus files which are snapshots of an optimization history. Each snapshot reflects a design change and how it is gradually being improved and more optimal. I want to make a movie showing this optimization history.

What I have done so far is to add all the files in the pipeline showing the design field, add each file to the Animation View as a frame and play with the Opacity and the time intervals to show the design transitions. This looks alright, but I what I think that would look better is to use a Temporal Interpolator filter. For that I would need to have a time series. I tried modifying the file names and adjust them to the convention filename.e-s.001, filename.e-s.002, etc, but this doesn't do anything. I think the reason is because the exodus files do not contain anything related to time. Is this correct? How could I add time to my exodus files within paraview?

Thanks
Miguel




_______________________________________________
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Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html

Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView

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From Boettcher at kleintierklinik.uni-leipzig.de  Fri Feb 12 16:41:23 2016
From: Boettcher at kleintierklinik.uni-leipzig.de (=?iso-8859-1?Q?B=F6ttcher=2C_Prof=2E_Dr=2E_Peter?=)
Date: Fri, 12 Feb 2016 21:41:23 +0000
Subject: [Paraview] Get the name of a dataset
Message-ID: <6F6862A90839CE478D2A3146C2C31B4F5735DC@EMAIL2.ktk.uni-leipzig.de>

I wrote a plugin which does some calculations on the scalar values of a data set. I would like to name the new scalars according to the name of the dataset. Is it possible to retrieve the name of the dataset?

With kind regards, Peter

______________________________________
Prof. Dr. Peter B?ttcher
Dipl. ECVS, Fachtierarzt f?r Kleintierchirurgie
Klinik f?r Kleintiere
Universit?t Leipzig
An den Tierkliniken 23
04103 Leipzig
Tel: 00 49 341 97 38 700
Fax: 00 49 341 97 38 799
Mail: boettcher at kleintierklinik.uni-leipzig.de

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From utkarsh.ayachit at kitware.com  Sat Feb 13 13:08:49 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Sat, 13 Feb 2016 13:08:49 -0500
Subject: [Paraview] Get the name of a dataset
In-Reply-To: <6F6862A90839CE478D2A3146C2C31B4F5735DC@EMAIL2.ktk.uni-leipzig.de>
References: <6F6862A90839CE478D2A3146C2C31B4F5735DC@EMAIL2.ktk.uni-leipzig.de>
Message-ID: <CADHSJjAmuCnvfpERor-+dqpMOjJb4GQ6abHj6z+KsPujpc8EhA@mail.gmail.com>

By, name of the dataset, do you mean name shown for the reader in the
pipeline browser? I am afraid there's no easy way of getting that name
from within a filter.

Utkarsh

On Fri, Feb 12, 2016 at 4:41 PM, B?ttcher, Prof. Dr. Peter
<Boettcher at kleintierklinik.uni-leipzig.de> wrote:
> I wrote a plugin which does some calculations on the scalar values of a data
> set. I would like to name the new scalars according to the name of the
> dataset. Is it possible to retrieve the name of the dataset?
>
>
>
> With kind regards, Peter
>
>
>
> ______________________________________
>
> Prof. Dr. Peter B?ttcher
>
> Dipl. ECVS, Fachtierarzt f?r Kleintierchirurgie
>
> Klinik f?r Kleintiere
>
> Universit?t Leipzig
>
> An den Tierkliniken 23
>
> 04103 Leipzig
>
> Tel: 00 49 341 97 38 700
>
> Fax: 00 49 341 97 38 799
>
> Mail: boettcher at kleintierklinik.uni-leipzig.de
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>

From henriquecsj at gmail.com  Sun Feb 14 15:18:36 2016
From: henriquecsj at gmail.com (Henrique C. S. Junior)
Date: Sun, 14 Feb 2016 18:18:36 -0200
Subject: [Paraview] Paraview 5 crashes openning any chemiical format
Message-ID: <CAEeMmBn-2+F=P8ZZoOK=bg1ZwNbTptxA_P+eb7qgmyHiqpAw4g@mail.gmail.com>

Using Windows 10 64 bit any chemical format (XYZ, PDB or CML) causes a
crash in Paraview 5 (both openmpi or serial versions).
Attached is a screenshot of the error.
Is anyone facing a similar issue?


-- 
*Henrique C. S. Junior*
Qu?mico Industrial - UFRRJ
Mestrando em Qu?mica Inorg?nica - UFRRJ
Centro de Processamento de Dados - PMP
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From ivan.schrooyen at gmail.com  Mon Feb 15 05:18:33 2016
From: ivan.schrooyen at gmail.com (Ivan Schrooyen)
Date: Mon, 15 Feb 2016 11:18:33 +0100
Subject: [Paraview] Export surface to CGNS format
Message-ID: <CACWO_A1zQO-MuDVH2p1ShyjbuRu6HdFpHgaS75edULKo6=ax4g@mail.gmail.com>

Hello,

I am working with a CFD free surface code.
I have a .vtu volume solution from which I extract one surface which is my
body and another which is my free surface.
I would like to export both surfaces in one CGNS file.
Do you have any idea how I could do that ?

Thanks in advance,
Ivan
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From hitcaozx at gmail.com  Mon Feb 15 11:30:27 2016
From: hitcaozx at gmail.com (=?UTF-8?B?5pu55pm66YCJ?=)
Date: Mon, 15 Feb 2016 11:30:27 -0500
Subject: [Paraview] Question about probe point data
In-Reply-To: <CANO2j4MyCzkT1XQJ2-9DQ9jnh0L4U3isrGszWuaFRnmy82xcAw@mail.gmail.com>
References: <D2E364B0.2CD95%kmorel@sandia.gov>
 <CANO2j4MyCzkT1XQJ2-9DQ9jnh0L4U3isrGszWuaFRnmy82xcAw@mail.gmail.com>
Message-ID: <CANO2j4NCfmpKNML7dtEZGOQ4HqFzQHLHjoypZwQiMFeHXW_ZrA@mail.gmail.com>

 Hello,
Even though I am able to obtain some data by first generating grid using
"Delaunay3D" and then adding "Probe Location". But the problem is that
these data that I obtained are questionable.
For example,
The coordinates of probe points is:
-64 0 15 while the coordinate  property (paraview treats all data including
property data like velocity, density and coordinate as field data)
interpolated based on probe location and grids that was generated is:
119 0 945
They are obviously different. I am not sue whether the "probed" value are
values at the probe location computed by interpolation or not?  It seems
that the interpolation is did in a incorrect way and gives me some
questionable data.

Is it possible that I can add probe locations without grids (the probe
would be interpolation purely based on point data) and define my own way of
interpolation, For example I can define kernel based collocation type of
interpolation. Do you think this is possible (feasible) in paraview?


2016-02-12 12:58 GMT-05:00 ??? <hitcaozx at gmail.com>:

> Thank you for your help.
> 1) As you said, it is not necessary to use "Resample With Dataset" filter.
> Just "Probe Location" is enough.
> 2) I figured out why I got all zeros: because the input data I am using is
> in .h5part format and they are just points data., no surface, no grid, no
> volume.
> 3) The way to overcome this issue is use Delaunay3D to generate grid. Then
> use "Probe Location".
> Hope this will help someone who also has similar problems.
>
>
> 2016-02-12 12:40 GMT-05:00 Moreland, Kenneth <kmorel at sandia.gov>:
>
>> The "Probe Location" and the "Resample With Dataset" filters actually use
>> the same code underneath the covers. The only difference is how the
>> geometry source is inputted (internally generated points for "Probe
>> Location" and another dataset for "Resample With Dataset"). Also "Probe
>> Location" is marked to by default show the results in a table view.
>> However, you can show the results of "Probe Location" in a 3D view as well.
>> Just select the 3D view and turn on its visibility.
>>
>> Anyway, the point of all that is that it should be unnecessary for you to
>> run the "Resample With Dataset" filter. You should get the same data from
>> the output of the "Probe Locations" filter.
>>
>> If all the field data in the output from "Probe Locations" are zero, then
>> there is some reason why the filter could not find field data at the
>> selected points. Once common problem is that the points are not actually
>> located within the volume of your data. If your input data is actually a
>> surface, then this is likely as it is hard to place points exactly on the
>> surface. Another cause for problems that recently came up on the mailing
>> list is issues with using an unstructured grid dataset that has voxel-type
>> cells in it. The thread is captured here:
>> http://markmail.org/message/t5vbs7opn43wtkdw.
>>
>> -Ken
>>
>> From: ParaView <paraview-bounces at paraview.org> on behalf of ??? <
>> hitcaozx at gmail.com>
>> Date: Thursday, February 11, 2016 at 2:09 PM
>> To: "paraview at paraview.org" <paraview at paraview.org>
>> Subject: [EXTERNAL] [Paraview] Question about probe point data
>>
>> Hello,
>> I am trying to probe point based data with Paraview.
>> What I did is:
>> 1) Create probe points with "ProbeLocations"
>> 2) Then use "Resample With Dataset", choose input as the data that I have
>> already had and source as "ProbeLocations" that I created in the previous
>> step.
>>
>> The trouble that i have is:  All field data including coordinates are all
>> zero.
>>
>> Could someone help me out?
>>
>> Thank you very much!
>>
>> Orman
>>
>
>
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From wascott at sandia.gov  Mon Feb 15 16:44:25 2016
From: wascott at sandia.gov (Scott, W Alan)
Date: Mon, 15 Feb 2016 21:44:25 +0000
Subject: [Paraview] [EXTERNAL] Paraview 5 crashes openning any chemiical
 format
In-Reply-To: <CAEeMmBn-2+F=P8ZZoOK=bg1ZwNbTptxA_P+eb7qgmyHiqpAw4g@mail.gmail.com>
References: <CAEeMmBn-2+F=P8ZZoOK=bg1ZwNbTptxA_P+eb7qgmyHiqpAw4g@mail.gmail.com>
Message-ID: <2bf6b2daaed147c7a8495d54d74f09d5@ES01AMSNLNT.srn.sandia.gov>

Do you have a dataset you could share?

Alan

From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Henrique C. S. Junior
Sent: Sunday, February 14, 2016 1:19 PM
To: paraview at paraview.org
Subject: [EXTERNAL] [Paraview] Paraview 5 crashes openning any chemiical format

Using Windows 10 64 bit any chemical format (XYZ, PDB or CML) causes a crash in Paraview 5 (both openmpi or serial versions).
Attached is a screenshot of the error.
Is anyone facing a similar issue?


--
Henrique C. S. Junior
Qu?mico Industrial - UFRRJ
Mestrando em Qu?mica Inorg?nica - UFRRJ
Centro de Processamento de Dados - PMP
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From jfavre at cscs.ch  Tue Feb 16 05:11:50 2016
From: jfavre at cscs.ch (Favre  Jean)
Date: Tue, 16 Feb 2016 10:11:50 +0000
Subject: [Paraview] Cut plane average velocity over time
In-Reply-To: <f478ba8b5ddb4d199952c52bf31c2415@exdb01.ug.kth.se>
References: <f478ba8b5ddb4d199952c52bf31c2415@exdb01.ug.kth.se>
Message-ID: <0EB9B6375711A04B820E6B6F5CCA9F684357D9DF@MBX211.d.ethz.ch>

>> I would like to get an average over an entire cut plane (over time).

David

This sounds like a perfect case for a Python Programmable Filter, looping over timesteps, accumulating data, doing the average, and setting it as a new field. Here is a script I have tested on a single block of data with multiple timesteps.

There is an init phase, to get the number of timesteps, their values (from upstream), and the first dataset at the 0-th timestep.
There is an accumulate phase, where the filter pulls all timesteps, adding to the already existing numpy array.
There is a finish phase, where we do the average and assign it to a new field.

I am doing it for Pressure, you'll have to adapt it to your fieldnames and block structures.

-----------------
Jean M. Favre
Swiss National Supercomputing Center
CH-6900 Lugano
Switzerland
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From livia.barazzetti at istb.unibe.ch  Tue Feb 16 07:07:32 2016
From: livia.barazzetti at istb.unibe.ch (livia.barazzetti at istb.unibe.ch)
Date: Tue, 16 Feb 2016 12:07:32 +0000
Subject: [Paraview] Resources for programmable filter with
	python_filter_generator.py
Message-ID: <C8921E2F87E8024BBD6C59CB07C0F47D39964BC2@AAI-EXCH-MBX1.campus.unibe.ch>

Hi,
It seems that it's not possible to get the python_filter_generator.py script from  https://blog.kitware.com/easy-customization-of-the-paraview-python-programmable-filter-property-panel/ (also the code snippets render weird  in the new blog design).
Is there maybe a copy of it in the wiki or in the documentation?
Thank you
Livia


Livia Barazzetti
Ph.D. Student - Medical Image Analysis
Institute for Surgical Technology and Biomechanics
University of Bern
Stauffacherstrasse 78
CH-3014 Bern
Tel +41 31 631 59 48
http://www.istb.unibe.ch<http://www.istb.unibe.ch/>

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From utkarsh.ayachit at kitware.com  Tue Feb 16 09:33:22 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Tue, 16 Feb 2016 09:33:22 -0500
Subject: [Paraview] Resources for programmable filter with
	python_filter_generator.py
In-Reply-To: <C8921E2F87E8024BBD6C59CB07C0F47D39964BC2@AAI-EXCH-MBX1.campus.unibe.ch>
References: <C8921E2F87E8024BBD6C59CB07C0F47D39964BC2@AAI-EXCH-MBX1.campus.unibe.ch>
Message-ID: <CADHSJjAhDyP-eb4spULStZYgqwo8vSp6XHYon_iECD7yNwm3VA@mail.gmail.com>

Livia,

I've put the script up as a code snippet on gitlab here:
https://gitlab.kitware.com/paraview/paraview/snippets/5

Utkarsh

On Tue, Feb 16, 2016 at 7:07 AM, <livia.barazzetti at istb.unibe.ch> wrote:

> Hi,
>
> It seems that it?s not possible to get the python_filter_generator.py
> script from
> https://blog.kitware.com/easy-customization-of-the-paraview-python-programmable-filter-property-panel/
> (also the code snippets render weird  in the new blog design).
>
> Is there maybe a copy of it in the wiki or in the documentation?
>
> Thank you
>
> Livia
>
>
>
>
>
> Livia Barazzetti
> Ph.D. Student - Medical Image Analysis
> Institute for Surgical Technology and Biomechanics
> University of Bern
> Stauffacherstrasse 78
> CH-3014 Bern
> Tel +41 31 631 59 48
> http://www.istb.unibe.ch
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From andy.bauer at kitware.com  Tue Feb 16 10:30:15 2016
From: andy.bauer at kitware.com (Andy Bauer)
Date: Tue, 16 Feb 2016 10:30:15 -0500
Subject: [Paraview] ParaView 5.0.0 with Catalyst: OpenGL2 backend in
 server, not in client
In-Reply-To: <CADR2tx4+DkLZXVBRF_Y=OExXVB=BnNSMaBZDOLBbCJLyzLqHbQ@mail.gmail.com>
References: <CADR2tx4+DkLZXVBRF_Y=OExXVB=BnNSMaBZDOLBbCJLyzLqHbQ@mail.gmail.com>
Message-ID: <CAMaOp+G4DQ0xxxDSEoRe7JN=fNn5Wsq2rZsVEqrD2KORoGkp=w@mail.gmail.com>

Hi Alexandre,

This is a known issue in PV 5.0 in that the server and client must use the
same back-end rendering version. I believe there's a fix on the way to
better inform what the issue is when a user encounters this.

thanks,
Andy

On Fri, Feb 12, 2016 at 12:23 PM, Alexandre Ancel <
alexandre.ancel at cemosis.fr> wrote:

> Hello,
>
> A word about the context: I am working on a library that uses Catalyst to
> do Live visualization with ParaView. In this library, I just create a proxy
> to a PVTrivialProducer and then set its output to send the data
> (vtkUnstructuredGrid) to ParaView. This part is working very well.
>
> I built the 5.0.0 version of ParaView on our data server with the OpenGL2
> backend enabled, but when I built the 5.0.0 version of ParaView on my
> client with OS X (I needed the developement headers), I noticed that I
> forgot to add the option to enable the new OpenGL backend:
> -DVTK_RENDERING_BACKEND=OpenGL2. So I ended up having version 1.4 for
> OpenGL in this version.
>
> When I tried to use our application with Catalyst, everything worked fine,
> until I wanted to visualize the data extract from the proxy in the ParaView
> interface.
> ParaView then crashed with the following error:
> "
> ERROR: In
> /tmp/ParaView-v5.0.0-source/ParaViewCore/ServerImplementation/Core/vtkSIProxy.cxx,
> line 310
> vtkSISourceProxy (0x4aefb50): Failed to create
> vtkPointGaussianRepresentation. Aborting for debugging purposes.
>
> Aborted
> "
>
> Looking at the proxy definition in
> ParaViewCore/ServerManager/SMApplication/Resources/, I see that there is a
> proxy for vtkPointGaussianRepresentation in proxies_opengl2.xml, but not in
> proxies_opengl1.xml.
>
> Am I getting an expected behavior here due to the option I forgot ?
>
>
> Note that I also have the standard pre-packaged version of ParaView (with
> the OpenGL2 backend and OpenGL v4.1) installed on OS X and I don't get the
> previous issue and everything is ok.
>
> In summary and with version 5.0.0 for everything:
> ParaView (No OpenGL2) -> pvserver (OpenGL2) : causes a crash
> ParaView (OpenGL2) -> pvserver (OpenGL2) : is OK
>
> What do you think about checking the version of the OpenGL backend when
> connecting to a pv*server and see if they match ?
> And possibly display a message similar to the one displayed, when ParaView
> connects to a different version of pvserver (e.g. when a client in 4.4.0 to
> a server in 5.0.0)
>
>
> Best regards,
> Alexandre Ancel
>
>
> --
> Alexandre Ancel
> Docteur, Ing?nieur de recherche / Phd, Research Engineer
> Cemosis <http://www.cemosis.fr> - alexandre.ancel at cemosis.fr
> Tel: +33 (0)3 68 8*5 02 06*
> IRMA - 7, rue Ren? Descartes
> 67 000 Strasbourg, France
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From cory.quammen at kitware.com  Tue Feb 16 10:41:07 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Tue, 16 Feb 2016 10:41:07 -0500
Subject: [Paraview] Scalar bar ranges jump around
In-Reply-To: <CACXVUXH1idsucrRZ3hjepn7kOHd9gEUmYQrz0hqzf8N7yZ0OKw@mail.gmail.com>
References: <CACXVUXG9eSL2=KoR_rguJ6P3-9VcHRq+yzoRXpfAGK-A+qM6kg@mail.gmail.com>
 <C455D892-97D7-4F7B-913B-DBD5F6903E70@sandia.gov>
 <CACXVUXE10WjLi36fBRqJUkr0fkGT_z3Fqro1yEywVs-_xsUQ=g@mail.gmail.com>
 <CADHSJjDNomZxHtN6tamgWhDWJDF55wuvwg-UxzA5Dy-xjMqf5g@mail.gmail.com>
 <CACXVUXE6Z7Fr2vyqg+BcrX6uK1Jt-Y0WhSN+-umAsYbfw8NTFg@mail.gmail.com>
 <CADHSJjBKoHtvG-i+O_mrHXb+mTzW_b=eu=OgbOe4LUc9nKC2HQ@mail.gmail.com>
 <CACXVUXE_3NKf0y24hyFAgtEue1cKKG6hkcwK7u2b8cTmq5ZAwQ@mail.gmail.com>
 <CAB5Fpx5=WZ3urW3UgtwfgZW=GHgeOdoKD9K5gEtyOQtR0sjZCg@mail.gmail.com>
 <CACXVUXH1idsucrRZ3hjepn7kOHd9gEUmYQrz0hqzf8N7yZ0OKw@mail.gmail.com>
Message-ID: <CAB5Fpx7rDyAZABsFhf-YHDq1QhbC4zG579GEdtYHhSnjLTLHkQ@mail.gmail.com>

Quick update:

A bug has been filed for this problem:

http://www.paraview.org/Bug/view.php?id=16000

Best,
Cory

On Tue, Jan 5, 2016 at 6:00 PM, Bob Flandard <bflandard at gmail.com> wrote:
> Hello Cory,
>
> Thanks for confirming that you too can see this behavior, and for your
> efforts investigating it.
>
> Regards, Bob
>
> On 5 January 2016 at 21:57, Cory Quammen <cory.quammen at kitware.com> wrote:
>>
>> Hi Bob,
>>
>> Thank you for reporting this issue. I don't know the underlying reason
>> for this behavior, but I can confirm it and will be looking into it.
>>
>> Thank you,
>> Cory
>>
>> On Wed, Dec 30, 2015 at 5:39 PM, Bob Flandard <bflandard at gmail.com> wrote:
>> > Hello Utkarsh and Cory,
>> >
>> > This issue is not exclusive to "Automatic Annotations". It also exists
>> > with
>> > the default "Labels" type annotations with or without the "Automatic
>> > Label
>> > Format" selected.
>> >
>> > Thanks for investigating, Bob
>> >
>> > On 30 December 2015 at 21:53, Utkarsh Ayachit
>> > <utkarsh.ayachit at kitware.com>
>> > wrote:
>> >>
>> >> Ah, the issue seems to be with "Automatic Annotations". Cory, can you
>> >> check this out when you get the chance? I am not entirely sure how
>> >> automatic annotations should work here, if at all.
>> >>
>> >> Utkarsh
>> >>
>> >> On Tue, Dec 29, 2015 at 5:26 PM, Bob Flandard <bflandard at gmail.com>
>> >> wrote:
>> >> > Hello Utkarsh,
>> >> >
>> >> > Thank you for the suggestion. The plot I sent has already implicitly
>> >> > disabled "automatic label format" by only using the "Draw
>> >> > Annotations"
>> >> > and
>> >> > "Automatic Annotation" options, with the options in the "Labels"
>> >> > section
>> >> > unchecked. I tried explicitly unchecking the "Automatic Label Format"
>> >> > as
>> >> > you
>> >> > suggested, but it has no effect in this instance (as expected).
>> >> >
>> >> > Are you able to reproduce the effect from the attached state file?
>> >> >
>> >> > Thanks for your help, Bob
>> >> >
>> >> >
>> >> >
>> >> > On 29 December 2015 at 21:44, Utkarsh Ayachit
>> >> > <utkarsh.ayachit at kitware.com>
>> >> > wrote:
>> >> >>
>> >> >> Can you try unchecking the "Automatic Label Format" checkbox on the
>> >> >> "Edit Color Legend Parameters" dialog accessible from the "Color Map
>> >> >> Editor" panel? I think it's the label formatting that's causing the
>> >> >> issue.
>> >> >>
>> >> >> Utkarsh
>> >> >>
>> >> >> On Tue, Dec 29, 2015 at 4:07 PM, Bob Flandard <bflandard at gmail.com>
>> >> >> wrote:
>> >> >> > Hello Ken,
>> >> >> >
>> >> >> > Maybe you are seeing something different to what I see when
>> >> >> > playing
>> >> >> > the
>> >> >> > different time steps. I see the relative size of each of the
>> >> >> > discrete
>> >> >> > colours in the scalar bar, changing in a random way. The ticks
>> >> >> > don't
>> >> >> > move
>> >> >> > and the numbers change appropriately, but the length of each
>> >> >> > colour
>> >> >> > is
>> >> >> > not
>> >> >> > constant. I've attached an image that shows the scalar bar from
>> >> >> > three
>> >> >> > time
>> >> >> > step of the data set in the state file I posted yesterday. One
>> >> >> > (t=96)
>> >> >> > has a
>> >> >> > good scalar bar and the other two are wrong.
>> >> >> >
>> >> >> > Thanks for your help, Bob
>> >> >> >
>> >> >> > On 29 December 2015 at 17:49, Moreland, Kenneth
>> >> >> > <kmorel at sandia.gov>
>> >> >> > wrote:
>> >> >> >>
>> >> >> >> Bob,
>> >> >> >>
>> >> >> >> I am confused. The "clamp and update every timestep" feature is
>> >> >> >> what
>> >> >> >> turns
>> >> >> >> on the behavior of changing the scale of every timestep. Just
>> >> >> >> turn
>> >> >> >> it
>> >> >> >> off.
>> >> >> >>
>> >> >> >> -Ken
>> >> >> >>
>> >> >> >> Sent from my iPad so blame autocorrect.
>> >> >> >>
>> >> >> >> > On Dec 28, 2015, at 3:17 PM, Bob Flandard <bflandard at gmail.com>
>> >> >> >> > wrote:
>> >> >> >> >
>> >> >> >> > Hello,
>> >> >> >> >
>> >> >> >> > Sorry if this is old news.
>> >> >> >> >
>> >> >> >> > The colour ranges on the scalar bar should remain equally
>> >> >> >> > spaced,
>> >> >> >> > but
>> >> >> >> > with the transfer function reset mode set to "clamp and update
>> >> >> >> > every
>> >> >> >> > timestep", they jump about during a time series animation.
>> >> >> >> >
>> >> >> >> > Attached is a state file that demonstrates the issue (created
>> >> >> >> > with
>> >> >> >> > PV
>> >> >> >> > v5.0 RC3). Please load it and click the play button, or
>> >> >> >> > manually
>> >> >> >> > click
>> >> >> >> > through time steps.
>> >> >> >> >
>> >> >> >> > Thanks, Bob
>> >> >> >> > <ScalarBarIssue.zip>
>> >> >> >> > _______________________________________________
>> >> >> >> > Powered by www.kitware.com
>> >> >> >> >
>> >> >> >> > Visit other Kitware open-source projects at
>> >> >> >> > http://www.kitware.com/opensource/opensource.html
>> >> >> >> >
>> >> >> >> > Please keep messages on-topic and check the ParaView Wiki at:
>> >> >> >> > http://paraview.org/Wiki/ParaView
>> >> >> >> >
>> >> >> >> > Search the list archives at:
>> >> >> >> > http://markmail.org/search/?q=ParaView
>> >> >> >> >
>> >> >> >> > Follow this link to subscribe/unsubscribe:
>> >> >> >> > http://public.kitware.com/mailman/listinfo/paraview
>> >> >> >
>> >> >> >
>> >> >> >
>> >> >> > _______________________________________________
>> >> >> > Powered by www.kitware.com
>> >> >> >
>> >> >> > Visit other Kitware open-source projects at
>> >> >> > http://www.kitware.com/opensource/opensource.html
>> >> >> >
>> >> >> > Please keep messages on-topic and check the ParaView Wiki at:
>> >> >> > http://paraview.org/Wiki/ParaView
>> >> >> >
>> >> >> > Search the list archives at:
>> >> >> > http://markmail.org/search/?q=ParaView
>> >> >> >
>> >> >> > Follow this link to subscribe/unsubscribe:
>> >> >> > http://public.kitware.com/mailman/listinfo/paraview
>> >> >> >
>> >> >
>> >> >
>> >
>> >
>>
>>
>>
>> --
>> Cory Quammen
>> R&D Engineer
>> Kitware, Inc.
>
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.

From utkarsh.ayachit at kitware.com  Tue Feb 16 23:36:41 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Tue, 16 Feb 2016 23:36:41 -0500
Subject: [Paraview] pv5.0 multi-page tiff in parallel
In-Reply-To: <31E850AB-CC73-49D6-B874-E975BD29365F@anl.gov>
References: <5441B291-C603-4D4D-B16D-06F3FD916D63@anl.gov>
 <CADHSJjC67HGeS-Jz-_SFHSuq3H-S0MSmHFSrURfM3W3NNDrGbA@mail.gmail.com>
 <31E850AB-CC73-49D6-B874-E975BD29365F@anl.gov>
Message-ID: <CADHSJjAnRLuRYPa31qvsXSHeFHkXb9wewvA9aheW6m2OTY4=JQ@mail.gmail.com>

Joe,
It was indeed a bug.

Here's a fix: https://gitlab.kitware.com/vtk/vtk/merge_requests/1228

Would be great if you get a chance to test it.

Utkarsh

On Thu, Feb 11, 2016 at 5:27 PM, Insley, Joseph A. <insley at anl.gov> wrote:
> Utkarsh,
>
> Thanks for looking at this.  I am checking with my user regarding a dataset that can be shared.  I will get back to you as soon as I hear from them, likely off list.
>
> Thanks
> joe
>
>> On Feb 11, 2016, at 1:28 PM, Utkarsh Ayachit <utkarsh.ayachit at kitware.com> wrote:
>>
>> Joe,
>>
>> Do you have a sample dataset to share? It's possible there's a bug in
>> the multipage seek code when dealing with sub extents.
>>
>> Utkarsh
>>
>> On Thu, Feb 11, 2016 at 1:28 PM, Insley, Joseph A. <insley at anl.gov> wrote:
>>> Hi,
>>>
>>> I?ve been looking at loading tiffs as volumes using pv5.0 and am running
>>> into trouble doing this in parallel.
>>>
>>> Loading a stack of tiff files as a volume works great, both serially and in
>>> parallel.  And I can load a multi-page tiff as a volume using a single
>>> pvserver just fine.  But when I run the pvserver in parallel and try to load
>>> a multi-page tiff pv crashes while trying to load.  No error messages are
>>> given (beyond the usual mpi errors about one of the processes terminating
>>> badly).
>>>
>>> I?m wondering if anyone else has had success trying to do this?
>>>
>>> Thanks
>>> joe
>>>
>>> ===================================================
>>> joseph a. insley
>>> insley at anl.gov
>>> argonne leadership computing facility                       (630) 252-5649
>>> argonne national laboratory
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>

From bencesomogyi at gmail.com  Wed Feb 17 03:05:20 2016
From: bencesomogyi at gmail.com (Somogyi Bence)
Date: Wed, 17 Feb 2016 09:05:20 +0100
Subject: [Paraview] state files: issue with Surface LIC representation,
 cyl slice coordinates are not kept
Message-ID: <CALhrvP86W_BTzsw=HqpN+mebe3EhzJtf-1mvdbrWjgp8B8M+XQ@mail.gmail.com>

Dear All,

I have problems with the Surface LIC representation in my state files. I
want to visualize my cuts inside the opaque mesh (opacity 0.3). When the
slice is visualized the representation of the mesh is changed, it shows
holes on the geometry and the surfaces are not opaque. Also the text in the
colorbars look ugly with a black background. With the normal Surface
representation the problem does not occur.

An other issue I have is that the slice coordinate settings are always
reset to the default values when they are in Cylinder mode. This is
irrespective if I use a state file or I just create a new slice.

I am using "ParaView-5.0.0-Qt4-OpenGL2-MPI-Windows-64bit".

Does any of you have a workaround for these issues?

Thanks,
Bence
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From cory.quammen at kitware.com  Wed Feb 17 10:15:54 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Wed, 17 Feb 2016 10:15:54 -0500
Subject: [Paraview] state files: issue with Surface LIC representation,
 cyl slice coordinates are not kept
In-Reply-To: <CALhrvP86W_BTzsw=HqpN+mebe3EhzJtf-1mvdbrWjgp8B8M+XQ@mail.gmail.com>
References: <CALhrvP86W_BTzsw=HqpN+mebe3EhzJtf-1mvdbrWjgp8B8M+XQ@mail.gmail.com>
Message-ID: <CAB5Fpx7sB=HMmLPsf6uAY=Vq0pLgFoFMWa0X=uQNzhZ64_itDA@mail.gmail.com>

Hi Bence,

Could you list the steps to reproduce this in ParaView and perhaps
post a screenshot or two of the problem?

Thanks,
Cory

On Wed, Feb 17, 2016 at 3:05 AM, Somogyi Bence <bencesomogyi at gmail.com> wrote:
> Dear All,
>
> I have problems with the Surface LIC representation in my state files. I
> want to visualize my cuts inside the opaque mesh (opacity 0.3). When the
> slice is visualized the representation of the mesh is changed, it shows
> holes on the geometry and the surfaces are not opaque. Also the text in the
> colorbars look ugly with a black background. With the normal Surface
> representation the problem does not occur.
>
> An other issue I have is that the slice coordinate settings are always reset
> to the default values when they are in Cylinder mode. This is irrespective
> if I use a state file or I just create a new slice.
>
> I am using "ParaView-5.0.0-Qt4-OpenGL2-MPI-Windows-64bit".
>
> Does any of you have a workaround for these issues?
>
> Thanks,
> Bence
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.

From ken.martin at kitware.com  Wed Feb 17 12:51:15 2016
From: ken.martin at kitware.com (Ken Martin)
Date: Wed, 17 Feb 2016 12:51:15 -0500
Subject: [Paraview] [EXTERNAL] Paraview 5 crashes openning any chemiical
	format
In-Reply-To: <2bf6b2daaed147c7a8495d54d74f09d5@ES01AMSNLNT.srn.sandia.gov>
References: <CAEeMmBn-2+F=P8ZZoOK=bg1ZwNbTptxA_P+eb7qgmyHiqpAw4g@mail.gmail.com>
 <2bf6b2daaed147c7a8495d54d74f09d5@ES01AMSNLNT.srn.sandia.gov>
Message-ID: <CANXz0SY+jrMmkHOPOnLusYL=_xLtgmOQu1=ju45fUm==qoGvow@mail.gmail.com>

For some reason I recall this issue as well. My PV build seemed to work
while the installed PV binary crashed. Maybe somehow tied into the new
DomainsChemestryOpenGL2 library that has the new specialized molecular
mappers in it.

Ken


On Mon, Feb 15, 2016 at 4:44 PM, Scott, W Alan <wascott at sandia.gov> wrote:

> Do you have a dataset you could share?
>
>
>
> Alan
>
>
>
> *From:* ParaView [mailto:paraview-bounces at paraview.org] *On Behalf Of *Henrique
> C. S. Junior
> *Sent:* Sunday, February 14, 2016 1:19 PM
> *To:* paraview at paraview.org
> *Subject:* [EXTERNAL] [Paraview] Paraview 5 crashes openning any
> chemiical format
>
>
>
> Using Windows 10 64 bit any chemical format (XYZ, PDB or CML) causes a
> crash in Paraview 5 (both openmpi or serial versions).
>
> Attached is a screenshot of the error.
>
> Is anyone facing a similar issue?
>
>
>
>
>
> --
>
> *Henrique C. S. Junior*
> Qu?mico Industrial - UFRRJ
>
> Mestrando em Qu?mica Inorg?nica - UFRRJ
> Centro de Processamento de Dados - PMP
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>


-- 
Ken Martin PhD
Chairman & CFO
Kitware Inc.
28 Corporate Drive
Clifton Park NY 12065
518 371 3971

This communication, including all attachments, contains confidential and
legally privileged information, and it is intended only for the use of the
addressee.  Access to this email by anyone else is unauthorized. If you are
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From ganesh.iitm at gmail.com  Wed Feb 17 14:26:13 2016
From: ganesh.iitm at gmail.com (Ganesh Vijayakumar)
Date: Wed, 17 Feb 2016 19:26:13 +0000
Subject: [Paraview] Installing Paraview with OS Mesa for off screen rendering
Message-ID: <CAFtK+eu8U1fH5hNg2x9gBtDbrpDy0NaxArTPaDLVRQyvT7gEHA@mail.gmail.com>

Hello,

  I'm trying to install Paraview-v5.0.0 with OS Mesa for off screen
rendering using cmake. I was following instructions from the wiki. I
installed the mesa libraries first.

#From Paraview wiki
./configure --disable-xvmc --disable-glx --disable-dri
--with-dri-drivers="" --with-gallium-drivers="swrast"
--enable-texture-float --disable-shared-glapi -\
-disable-egl --with-egl-platforms="" --enable-gallium-osmesa
--enable-gallium-llvm=yes --with-llvm-shared-libs

I had issues with "-disable-shared-glapi". Then on
http://comments.gmane.org/gmane.comp.science.paraview.user/26440, I saw
that this option was removed. Now it compiles ok.

./configure --disable-xvmc --disable-glx --disable-dri --with-dri-drivers=
--with-gallium-drivers=swrast --enable-texture-float --disable-egl
--with-egl-plat\
forms= --enable-gallium-osmesa --enable-gallium-llvm=yes
--prefix=/storage/home/guv106/Installers/Paraview/mesa-11.1.2 &>
log.configure

Moving on after installing a new cmake with SSL compatibility that finds
the right python etc. , I get this error now when compiling paraview

/usr/lib64/libGL.so.1: undefined reference to `_glapi_tls_Dispatch'

I see that the wiki asks me to use the system libGLU as
-DOPENGL_glu_LIBRARY={MESA_INSTALL_PREFIX}/lib/libGLU.[so|a] \, however,
that library on my system refers to the system libGL instead of the
libOSMesa.so I just installed. How do I get around this? I'm unable to
install libGLU from freedesktop myself because it seem to need GL. Any
ideas? Am I missing some obvious step here? Should I attach my
CMakeCache.txt?

ganesh
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From utkarsh.ayachit at kitware.com  Wed Feb 17 14:34:07 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Wed, 17 Feb 2016 14:34:07 -0500
Subject: [Paraview] Installing Paraview with OS Mesa for off screen
	rendering
In-Reply-To: <CAFtK+eu8U1fH5hNg2x9gBtDbrpDy0NaxArTPaDLVRQyvT7gEHA@mail.gmail.com>
References: <CAFtK+eu8U1fH5hNg2x9gBtDbrpDy0NaxArTPaDLVRQyvT7gEHA@mail.gmail.com>
Message-ID: <CADHSJjBnebatt9aLuKpCad9c7N0g1OjeVBAxXqEjmyhoeZabuQ@mail.gmail.com>

Just set libGLU to empty. If I am not mistaken, it's optional (only
needed for some testing and GMV reader from VisItBridge which you can
disable).



On Wed, Feb 17, 2016 at 2:26 PM, Ganesh Vijayakumar
<ganesh.iitm at gmail.com> wrote:
> Hello,
>
>   I'm trying to install Paraview-v5.0.0 with OS Mesa for off screen
> rendering using cmake. I was following instructions from the wiki. I
> installed the mesa libraries first.
>
> #From Paraview wiki
> ./configure --disable-xvmc --disable-glx --disable-dri --with-dri-drivers=""
> --with-gallium-drivers="swrast" --enable-texture-float
> --disable-shared-glapi -\
> -disable-egl --with-egl-platforms="" --enable-gallium-osmesa
> --enable-gallium-llvm=yes --with-llvm-shared-libs
>
> I had issues with "-disable-shared-glapi". Then on
> http://comments.gmane.org/gmane.comp.science.paraview.user/26440, I saw that
> this option was removed. Now it compiles ok.
>
> ./configure --disable-xvmc --disable-glx --disable-dri --with-dri-drivers=
> --with-gallium-drivers=swrast --enable-texture-float --disable-egl
> --with-egl-plat\
> forms= --enable-gallium-osmesa --enable-gallium-llvm=yes
> --prefix=/storage/home/guv106/Installers/Paraview/mesa-11.1.2 &>
> log.configure
>
> Moving on after installing a new cmake with SSL compatibility that finds the
> right python etc. , I get this error now when compiling paraview
>
> /usr/lib64/libGL.so.1: undefined reference to `_glapi_tls_Dispatch'
>
> I see that the wiki asks me to use the system libGLU as
> -DOPENGL_glu_LIBRARY={MESA_INSTALL_PREFIX}/lib/libGLU.[so|a] \, however,
> that library on my system refers to the system libGL instead of the
> libOSMesa.so I just installed. How do I get around this? I'm unable to
> install libGLU from freedesktop myself because it seem to need GL. Any
> ideas? Am I missing some obvious step here? Should I attach my
> CMakeCache.txt?
>
> ganesh
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>

From samuelkey at bresnan.net  Wed Feb 17 14:59:07 2016
From: samuelkey at bresnan.net (Samuel Key)
Date: Wed, 17 Feb 2016 12:59:07 -0700
Subject: [Paraview] SWKey: Help with VTK XML-Formatted "Writer" Routine.
Message-ID: <56C4D10B.3030007@bresnan.net>

My simulation software has a functioning VTK XML-formatted, "ascii" 
output routine. To facilitate datum set transfers, I want to add 
arbitrary, m-vertex polyhedral finite elements to the simulation 
software's existing Writer (VTK_POLYHEDRON = 42).

Originally, I used the VTK File Formats Version 4.2 to construct the 
program's Writer. It is not clear to me what the XML structures should 
contain with respect to the polyhedral finite elements.

Three files are attached: (1) *.inp is an input snippet for a polyhedral 
finite element used by the simulation software, (2) *.png is a ParaView 
screenshot display for this polyhedron read in from an EnSight-formatted 
file, and (3) *.vtu is a ParaView 'Save Data' output file for this 
polyhedral finite element.

Referring to the *.vtu file, I am having difficulty relating the 
simulation software's and  EnSight's corresponding input description to 
the ParaView output description, particularly, "connectivity" and "faces."

Do you have any advice on how I should proceed?

Note: The simulation software does not require the polygon faces to be 
planar, nor the polyhedron volume to be convex. The simulation software 
computes proper mean quadrature gradient/divergence operators for 
non-planar facets and a restricted form of polyhedral star-convexity.

Thanks in advance for the indicating how I should continue,

Samuel Key
FMA Development, LLC
1005 39th Ave NE
Great Falls, Montana 59404
USA


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  PHEL   1,99, 1, 1 =  1  2  3  4  5  6 $ PHEL's  POLYG n-tuple
  POLYG  1  1  1  1,4,20,3,2,17         $ POLYG's POINT m-tuple
  POLYG  2  1  2  2,3,7,6
  POLYG  3  1  3  5,18,6,7,19,8
  POLYG  4  1  4  1,5,8,4
  POLYG  5  1  5  1,17,2,6,18,5
  POLYG  6  1  6  3,20,4,8,19,7
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<VTKFile type="UnstructuredGrid" version="1.0" byte_order="LittleEndian" header_type="UInt64">
  <UnstructuredGrid>
    <Piece NumberOfPoints="12" NumberOfCells="1">
      <PointData>
      </PointData>
      <CellData>
      </CellData>
      <Points>
        <DataArray type="Float32" Name="Points" NumberOfComponents="3" format="ascii" RangeMin="0.46457400363" RangeMax="1.2312306844">
          0.24899999797 0.34200000763 0.19200000167 0.8259999752 0.2879999876 0.2879999876
          0.85000002384 0.64899998903 0.26300001144 0.27300000191 0.75 0.23000000417
          0.31999999285 0.18600000441 0.64300000668 0.67699998617 0.30500000715 0.68300002813
          0.7879999876 0.6930000186 0.6439999938 0.16500000656 0.74500000477 0.70200002193
          0.54750001431 0.21500000358 0.25 0.48849999905 0.45600000024 0.65299999714
          0.47650000453 0.71899998188 0.67299997807 0.56150001287 0.69999998808 0.24699999392
        </DataArray>
      </Points>
      <Cells>
        <DataArray type="Int64" Name="connectivity" format="ascii" RangeMin="0" RangeMax="11">
          0 3 11 2 1 8
          6 5 4 9 10 7
        </DataArray>
        <DataArray type="Int64" Name="offsets" format="ascii" RangeMin="12" RangeMax="12">
          12
        </DataArray>
        <DataArray type="UInt8" Name="types" format="ascii" RangeMin="42" RangeMax="42">
          42
        </DataArray>
        <DataArray type="Int64" Name="faces" format="ascii" RangeMin="0" RangeMax="11">
          6 6 0 3 11 2
          1 8 4 1 2 6
          5 6 4 9 5 6
          10 7 4 0 4 7
          3 6 0 8 1 5
          9 4 6 2 11 3
          7 10 6
        </DataArray>
        <DataArray type="Int64" Name="faceoffsets" format="ascii" RangeMin="39" RangeMax="39">
          39
        </DataArray>
      </Cells>
    </Piece>
  </UnstructuredGrid>
</VTKFile>

From dkxls23 at gmail.com  Wed Feb 17 16:48:35 2016
From: dkxls23 at gmail.com (Armin Wehrfritz)
Date: Wed, 17 Feb 2016 23:48:35 +0200
Subject: [Paraview] SWKey: Help with VTK XML-Formatted "Writer" Routine.
In-Reply-To: <56C4D10B.3030007@bresnan.net>
References: <56C4D10B.3030007@bresnan.net>
Message-ID: <56C4EAB3.7070307@gmail.com>

On this wiki page you find information on how polyhedrons are stored in
unstructured XML files (search the page for vtkXMLUnstructuredGrid):
http://www.vtk.org/Wiki/VTK/Polyhedron_Support

Hope it helps.

-Armin



On 02/17/2016 09:59 PM, Samuel Key wrote:
> My simulation software has a functioning VTK XML-formatted, "ascii"
> output routine. To facilitate datum set transfers, I want to add
> arbitrary, m-vertex polyhedral finite elements to the simulation
> software's existing Writer (VTK_POLYHEDRON = 42).
>
> Originally, I used the VTK File Formats Version 4.2 to construct the
> program's Writer. It is not clear to me what the XML structures should
> contain with respect to the polyhedral finite elements.
>
> Three files are attached: (1) *.inp is an input snippet for a polyhedral
> finite element used by the simulation software, (2) *.png is a ParaView
> screenshot display for this polyhedron read in from an EnSight-formatted
> file, and (3) *.vtu is a ParaView 'Save Data' output file for this
> polyhedral finite element.
>
> Referring to the *.vtu file, I am having difficulty relating the
> simulation software's and  EnSight's corresponding input description to
> the ParaView output description, particularly, "connectivity" and "faces."
>
> Do you have any advice on how I should proceed?
>
> Note: The simulation software does not require the polygon faces to be
> planar, nor the polyhedron volume to be convex. The simulation software
> computes proper mean quadrature gradient/divergence operators for
> non-planar facets and a restricted form of polyhedral star-convexity.
>
> Thanks in advance for the indicating how I should continue,
>
> Samuel Key
> FMA Development, LLC
> 1005 39th Ave NE
> Great Falls, Montana 59404
> USA
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>

From ganesh.iitm at gmail.com  Wed Feb 17 17:31:04 2016
From: ganesh.iitm at gmail.com (Ganesh Vijayakumar)
Date: Wed, 17 Feb 2016 22:31:04 +0000
Subject: [Paraview] Installing Paraview with OS Mesa for off screen
	rendering
In-Reply-To: <CADHSJjBnebatt9aLuKpCad9c7N0g1OjeVBAxXqEjmyhoeZabuQ@mail.gmail.com>
References: <CAFtK+eu8U1fH5hNg2x9gBtDbrpDy0NaxArTPaDLVRQyvT7gEHA@mail.gmail.com>
 <CADHSJjBnebatt9aLuKpCad9c7N0g1OjeVBAxXqEjmyhoeZabuQ@mail.gmail.com>
Message-ID: <CAFtK+evwF_J5HPPE-wc0ibLCj+VXsnjGBjuPgwXgbgj6T3V7=g@mail.gmail.com>

I still get the same problem despite setting that field to empty. The
problem occurs here

[ 94%] Linking C executable ../../../../bin/icetTests_mpi_opengl
/usr/lib64/libGL.so.1: undefined reference to `_glapi_tls_Dispatch'
collect2: error: ld returned 1 exit status
make[2]: *** [bin/icetTests_mpi_opengl] Error 1
make[1]: ***
[ThirdParty/IceT/vtkicet/tests/CMakeFiles/icetTests_mpi_opengl.dir/all]
Error 2
make: *** [all] Error 2

I guess the compiler is picking up that library on it's own. Any ideas on
what this problem is? The compilation goes all the way to 94% .. in serial
mode though!

ganesh

On Wed, Feb 17, 2016 at 12:34 PM Utkarsh Ayachit <
utkarsh.ayachit at kitware.com> wrote:

> Just set libGLU to empty. If I am not mistaken, it's optional (only
> needed for some testing and GMV reader from VisItBridge which you can
> disable).
>
>
>
> On Wed, Feb 17, 2016 at 2:26 PM, Ganesh Vijayakumar
> <ganesh.iitm at gmail.com> wrote:
> > Hello,
> >
> >   I'm trying to install Paraview-v5.0.0 with OS Mesa for off screen
> > rendering using cmake. I was following instructions from the wiki. I
> > installed the mesa libraries first.
> >
> > #From Paraview wiki
> > ./configure --disable-xvmc --disable-glx --disable-dri
> --with-dri-drivers=""
> > --with-gallium-drivers="swrast" --enable-texture-float
> > --disable-shared-glapi -\
> > -disable-egl --with-egl-platforms="" --enable-gallium-osmesa
> > --enable-gallium-llvm=yes --with-llvm-shared-libs
> >
> > I had issues with "-disable-shared-glapi". Then on
> > http://comments.gmane.org/gmane.comp.science.paraview.user/26440, I saw
> that
> > this option was removed. Now it compiles ok.
> >
> > ./configure --disable-xvmc --disable-glx --disable-dri
> --with-dri-drivers=
> > --with-gallium-drivers=swrast --enable-texture-float --disable-egl
> > --with-egl-plat\
> > forms= --enable-gallium-osmesa --enable-gallium-llvm=yes
> > --prefix=/storage/home/guv106/Installers/Paraview/mesa-11.1.2 &>
> > log.configure
> >
> > Moving on after installing a new cmake with SSL compatibility that finds
> the
> > right python etc. , I get this error now when compiling paraview
> >
> > /usr/lib64/libGL.so.1: undefined reference to `_glapi_tls_Dispatch'
> >
> > I see that the wiki asks me to use the system libGLU as
> > -DOPENGL_glu_LIBRARY={MESA_INSTALL_PREFIX}/lib/libGLU.[so|a] \, however,
> > that library on my system refers to the system libGL instead of the
> > libOSMesa.so I just installed. How do I get around this? I'm unable to
> > install libGLU from freedesktop myself because it seem to need GL. Any
> > ideas? Am I missing some obvious step here? Should I attach my
> > CMakeCache.txt?
> >
> > ganesh
> >
> > _______________________________________________
> > Powered by www.kitware.com
> >
> > Visit other Kitware open-source projects at
> > http://www.kitware.com/opensource/opensource.html
> >
> > Please keep messages on-topic and check the ParaView Wiki at:
> > http://paraview.org/Wiki/ParaView
> >
> > Search the list archives at: http://markmail.org/search/?q=ParaView
> >
> > Follow this link to subscribe/unsubscribe:
> > http://public.kitware.com/mailman/listinfo/paraview
> >
>
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From ganesh.iitm at gmail.com  Wed Feb 17 18:03:02 2016
From: ganesh.iitm at gmail.com (Ganesh Vijayakumar)
Date: Wed, 17 Feb 2016 23:03:02 +0000
Subject: [Paraview] Installing Paraview with OS Mesa for off screen
	rendering
In-Reply-To: <CAFtK+evwF_J5HPPE-wc0ibLCj+VXsnjGBjuPgwXgbgj6T3V7=g@mail.gmail.com>
References: <CAFtK+eu8U1fH5hNg2x9gBtDbrpDy0NaxArTPaDLVRQyvT7gEHA@mail.gmail.com>
 <CADHSJjBnebatt9aLuKpCad9c7N0g1OjeVBAxXqEjmyhoeZabuQ@mail.gmail.com>
 <CAFtK+evwF_J5HPPE-wc0ibLCj+VXsnjGBjuPgwXgbgj6T3V7=g@mail.gmail.com>
Message-ID: <CAFtK+evdu_0BrBOpcHW2DVpDQjjxXzkDDnz-2Ev-skV-t19=eA@mail.gmail.com>

Turned off the IceT tests using the boolean option in CMakeCache.txt. Seems
to go through with the compilation. Not sure if this will affect what I use
it for though. I do intend to run it in parallel using python scripting.
Will report back.

ganesh

On Wed, Feb 17, 2016 at 3:31 PM Ganesh Vijayakumar <ganesh.iitm at gmail.com>
wrote:

> I still get the same problem despite setting that field to empty. The
> problem occurs here
>
> [ 94%] Linking C executable ../../../../bin/icetTests_mpi_opengl
> /usr/lib64/libGL.so.1: undefined reference to `_glapi_tls_Dispatch'
> collect2: error: ld returned 1 exit status
> make[2]: *** [bin/icetTests_mpi_opengl] Error 1
> make[1]: ***
> [ThirdParty/IceT/vtkicet/tests/CMakeFiles/icetTests_mpi_opengl.dir/all]
> Error 2
> make: *** [all] Error 2
>
> I guess the compiler is picking up that library on it's own. Any ideas on
> what this problem is? The compilation goes all the way to 94% .. in serial
> mode though!
>
> ganesh
>
> On Wed, Feb 17, 2016 at 12:34 PM Utkarsh Ayachit <
> utkarsh.ayachit at kitware.com> wrote:
>
>> Just set libGLU to empty. If I am not mistaken, it's optional (only
>> needed for some testing and GMV reader from VisItBridge which you can
>> disable).
>>
>>
>>
>> On Wed, Feb 17, 2016 at 2:26 PM, Ganesh Vijayakumar
>> <ganesh.iitm at gmail.com> wrote:
>> > Hello,
>> >
>> >   I'm trying to install Paraview-v5.0.0 with OS Mesa for off screen
>> > rendering using cmake. I was following instructions from the wiki. I
>> > installed the mesa libraries first.
>> >
>> > #From Paraview wiki
>> > ./configure --disable-xvmc --disable-glx --disable-dri
>> --with-dri-drivers=""
>> > --with-gallium-drivers="swrast" --enable-texture-float
>> > --disable-shared-glapi -\
>> > -disable-egl --with-egl-platforms="" --enable-gallium-osmesa
>> > --enable-gallium-llvm=yes --with-llvm-shared-libs
>> >
>> > I had issues with "-disable-shared-glapi". Then on
>> > http://comments.gmane.org/gmane.comp.science.paraview.user/26440, I
>> saw that
>> > this option was removed. Now it compiles ok.
>> >
>> > ./configure --disable-xvmc --disable-glx --disable-dri
>> --with-dri-drivers=
>> > --with-gallium-drivers=swrast --enable-texture-float --disable-egl
>> > --with-egl-plat\
>> > forms= --enable-gallium-osmesa --enable-gallium-llvm=yes
>> > --prefix=/storage/home/guv106/Installers/Paraview/mesa-11.1.2 &>
>> > log.configure
>> >
>> > Moving on after installing a new cmake with SSL compatibility that
>> finds the
>> > right python etc. , I get this error now when compiling paraview
>> >
>> > /usr/lib64/libGL.so.1: undefined reference to `_glapi_tls_Dispatch'
>> >
>> > I see that the wiki asks me to use the system libGLU as
>> > -DOPENGL_glu_LIBRARY={MESA_INSTALL_PREFIX}/lib/libGLU.[so|a] \, however,
>> > that library on my system refers to the system libGL instead of the
>> > libOSMesa.so I just installed. How do I get around this? I'm unable to
>> > install libGLU from freedesktop myself because it seem to need GL. Any
>> > ideas? Am I missing some obvious step here? Should I attach my
>> > CMakeCache.txt?
>> >
>> > ganesh
>> >
>> > _______________________________________________
>> > Powered by www.kitware.com
>> >
>> > Visit other Kitware open-source projects at
>> > http://www.kitware.com/opensource/opensource.html
>> >
>> > Please keep messages on-topic and check the ParaView Wiki at:
>> > http://paraview.org/Wiki/ParaView
>> >
>> > Search the list archives at: http://markmail.org/search/?q=ParaView
>> >
>> > Follow this link to subscribe/unsubscribe:
>> > http://public.kitware.com/mailman/listinfo/paraview
>> >
>>
>
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From alexandre.ancel at cemosis.fr  Thu Feb 18 09:37:10 2016
From: alexandre.ancel at cemosis.fr (Alexandre Ancel)
Date: Thu, 18 Feb 2016 15:37:10 +0100
Subject: [Paraview] ParaView 5.0.0 with Catalyst: OpenGL2 backend in
 server, not in client
In-Reply-To: <CAMaOp+G4DQ0xxxDSEoRe7JN=fNn5Wsq2rZsVEqrD2KORoGkp=w@mail.gmail.com>
References: <CADR2tx4+DkLZXVBRF_Y=OExXVB=BnNSMaBZDOLBbCJLyzLqHbQ@mail.gmail.com>
 <CAMaOp+G4DQ0xxxDSEoRe7JN=fNn5Wsq2rZsVEqrD2KORoGkp=w@mail.gmail.com>
Message-ID: <CADR2tx6L9GP=aSrJhbnU=S6iS=KnHER0k++Sxq=Ee1Y2yq=Axg@mail.gmail.com>

Hi Andy,

Thanks for the feedback regarding this issue.
I'll pay attention to my build configuration while waiting for the fix.

Best regards,
Alexandre Ancel

On Tue, Feb 16, 2016 at 4:30 PM, Andy Bauer <andy.bauer at kitware.com> wrote:

> Hi Alexandre,
>
> This is a known issue in PV 5.0 in that the server and client must use the
> same back-end rendering version. I believe there's a fix on the way to
> better inform what the issue is when a user encounters this.
>
> thanks,
> Andy
>
> On Fri, Feb 12, 2016 at 12:23 PM, Alexandre Ancel <
> alexandre.ancel at cemosis.fr> wrote:
>
>> Hello,
>>
>> A word about the context: I am working on a library that uses Catalyst to
>> do Live visualization with ParaView. In this library, I just create a proxy
>> to a PVTrivialProducer and then set its output to send the data
>> (vtkUnstructuredGrid) to ParaView. This part is working very well.
>>
>> I built the 5.0.0 version of ParaView on our data server with the OpenGL2
>> backend enabled, but when I built the 5.0.0 version of ParaView on my
>> client with OS X (I needed the developement headers), I noticed that I
>> forgot to add the option to enable the new OpenGL backend:
>> -DVTK_RENDERING_BACKEND=OpenGL2. So I ended up having version 1.4 for
>> OpenGL in this version.
>>
>> When I tried to use our application with Catalyst, everything worked
>> fine, until I wanted to visualize the data extract from the proxy in the
>> ParaView interface.
>> ParaView then crashed with the following error:
>> "
>> ERROR: In
>> /tmp/ParaView-v5.0.0-source/ParaViewCore/ServerImplementation/Core/vtkSIProxy.cxx,
>> line 310
>> vtkSISourceProxy (0x4aefb50): Failed to create
>> vtkPointGaussianRepresentation. Aborting for debugging purposes.
>>
>> Aborted
>> "
>>
>> Looking at the proxy definition in
>> ParaViewCore/ServerManager/SMApplication/Resources/, I see that there is a
>> proxy for vtkPointGaussianRepresentation in proxies_opengl2.xml, but not in
>> proxies_opengl1.xml.
>>
>> Am I getting an expected behavior here due to the option I forgot ?
>>
>>
>> Note that I also have the standard pre-packaged version of ParaView (with
>> the OpenGL2 backend and OpenGL v4.1) installed on OS X and I don't get the
>> previous issue and everything is ok.
>>
>> In summary and with version 5.0.0 for everything:
>> ParaView (No OpenGL2) -> pvserver (OpenGL2) : causes a crash
>> ParaView (OpenGL2) -> pvserver (OpenGL2) : is OK
>>
>> What do you think about checking the version of the OpenGL backend when
>> connecting to a pv*server and see if they match ?
>> And possibly display a message similar to the one displayed, when
>> ParaView connects to a different version of pvserver (e.g. when a client in
>> 4.4.0 to a server in 5.0.0)
>>
>>
>> Best regards,
>> Alexandre Ancel
>>
>>
>> --
>> Alexandre Ancel
>> Docteur, Ing?nieur de recherche / Phd, Research Engineer
>> Cemosis <http://www.cemosis.fr> - alexandre.ancel at cemosis.fr
>> Tel: +33 (0)3 68 8*5 02 06*
>> IRMA - 7, rue Ren? Descartes
>> 67 000 Strasbourg, France
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>


-- 
Alexandre Ancel
Docteur, Ing?nieur de recherche / Phd, Research Engineer
Cemosis <http://www.cemosis.fr> - alexandre.ancel at cemosis.fr
Tel: +33 (0)3 68 8*5 02 06*
IRMA - 7, rue Ren? Descartes
67 000 Strasbourg, France
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From Boettcher at kleintierklinik.uni-leipzig.de  Thu Feb 18 11:12:38 2016
From: Boettcher at kleintierklinik.uni-leipzig.de (=?utf-8?B?QsO2dHRjaGVyLCBQcm9mLiBEci4gUGV0ZXI=?=)
Date: Thu, 18 Feb 2016 16:12:38 +0000
Subject: [Paraview] Get the name of a dataset
In-Reply-To: <CADHSJjAmuCnvfpERor-+dqpMOjJb4GQ6abHj6z+KsPujpc8EhA@mail.gmail.com>
References: <6F6862A90839CE478D2A3146C2C31B4F5735DC@EMAIL2.ktk.uni-leipzig.de>
 <CADHSJjAmuCnvfpERor-+dqpMOjJb4GQ6abHj6z+KsPujpc8EhA@mail.gmail.com>
Message-ID: <6F6862A90839CE478D2A3146C2C31B4F575BDC@EMAIL2.ktk.uni-leipzig.de>

Yes, that is exactly what I was looking for. 

Thanks, Peter


-----Urspr?ngliche Nachricht-----
Von: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com] 
Gesendet: Samstag, 13. Februar 2016 19:09
An: B?ttcher, Prof. Dr. Peter <Boettcher at kleintierklinik.uni-leipzig.de>
Cc: paraview at paraview.org
Betreff: Re: [Paraview] Get the name of a dataset

By, name of the dataset, do you mean name shown for the reader in the pipeline browser? I am afraid there's no easy way of getting that name from within a filter.

Utkarsh

On Fri, Feb 12, 2016 at 4:41 PM, B?ttcher, Prof. Dr. Peter <Boettcher at kleintierklinik.uni-leipzig.de> wrote:
> I wrote a plugin which does some calculations on the scalar values of 
> a data set. I would like to name the new scalars according to the name 
> of the dataset. Is it possible to retrieve the name of the dataset?
>
>
>
> With kind regards, Peter
>
>
>
> ______________________________________
>
> Prof. Dr. Peter B?ttcher
>
> Dipl. ECVS, Fachtierarzt f?r Kleintierchirurgie
>
> Klinik f?r Kleintiere
>
> Universit?t Leipzig
>
> An den Tierkliniken 23
>
> 04103 Leipzig
>
> Tel: 00 49 341 97 38 700
>
> Fax: 00 49 341 97 38 799
>
> Mail: boettcher at kleintierklinik.uni-leipzig.de
>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at 
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>

From Boettcher at kleintierklinik.uni-leipzig.de  Thu Feb 18 11:20:41 2016
From: Boettcher at kleintierklinik.uni-leipzig.de (=?iso-8859-1?Q?B=F6ttcher=2C_Prof=2E_Dr=2E_Peter?=)
Date: Thu, 18 Feb 2016 16:20:41 +0000
Subject: [Paraview] Failure to run compiled paraview under win10
Message-ID: <6F6862A90839CE478D2A3146C2C31B4F575BEF@EMAIL2.ktk.uni-leipzig.de>

I tried to compile different releases of paraview under win10 with exactly the same setting and libraries as with win7 (of course I run CMake separately on each machine). On both windows machines compilation (vs2010, qt8.8.2) ends without errors, but under win10 when starting paraview.exe I get errors relates to vtkpqApplicationComponent.dll. Under win7 paraview starts without any problems.

Any ideas, what might be the issue?

With kind regards, Peter.


____________________________________
Prof. Dr. Peter B?ttcher
Dipl. ECVS, Fachtierarzt f?r Kleintierchirurgie
Klinik f?r Kleintiere
Universit?t Leipzig
An den Tierkliniken 23
04103 Leipzig
Tel: 00 49 341 97 38 700
Fax: 00 49 341 97 38 799
Mail: boettcher at kleintierklinik.uni-leipzig.de

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From ganesh.iitm at gmail.com  Thu Feb 18 12:20:01 2016
From: ganesh.iitm at gmail.com (Ganesh Vijayakumar)
Date: Thu, 18 Feb 2016 17:20:01 +0000
Subject: [Paraview] Installing Paraview with OS Mesa for off screen
	rendering
In-Reply-To: <CAFtK+evdu_0BrBOpcHW2DVpDQjjxXzkDDnz-2Ev-skV-t19=eA@mail.gmail.com>
References: <CAFtK+eu8U1fH5hNg2x9gBtDbrpDy0NaxArTPaDLVRQyvT7gEHA@mail.gmail.com>
 <CADHSJjBnebatt9aLuKpCad9c7N0g1OjeVBAxXqEjmyhoeZabuQ@mail.gmail.com>
 <CAFtK+evwF_J5HPPE-wc0ibLCj+VXsnjGBjuPgwXgbgj6T3V7=g@mail.gmail.com>
 <CAFtK+evdu_0BrBOpcHW2DVpDQjjxXzkDDnz-2Ev-skV-t19=eA@mail.gmail.com>
Message-ID: <CAFtK+eu4SSBQAz4TkwAjB2c1HU0m63jsPWQLbi=aMJtRXu5i1w@mail.gmail.com>

Runs great. Thanks. Not sure if this means that IceT tests can't run with
Mesa. The option I turned off is this one

//Build and run the IceT tests.
ICET_BUILD_TESTING:BOOL=OFF

However, there is this other option that asks which library IceT tests
should use to "open windows"... can this happen with Mesa? Probably a noob
question.

//The name of the library the IceT tests will use to create windows for
OpenGL contexts. Supported values are GLUT and GLFW.
ICET_OPENGL_WINDOW_LIBRARY:STRING=GLUT

ganesh

On Wed, Feb 17, 2016 at 6:02 PM Ganesh Vijayakumar <ganesh.iitm at gmail.com>
wrote:

> Turned off the IceT tests using the boolean option in CMakeCache.txt.
> Seems to go through with the compilation. Not sure if this will affect what
> I use it for though. I do intend to run it in parallel using python
> scripting. Will report back.
>
> ganesh
>
> On Wed, Feb 17, 2016 at 3:31 PM Ganesh Vijayakumar <ganesh.iitm at gmail.com>
> wrote:
>
>> I still get the same problem despite setting that field to empty. The
>> problem occurs here
>>
>> [ 94%] Linking C executable ../../../../bin/icetTests_mpi_opengl
>> /usr/lib64/libGL.so.1: undefined reference to `_glapi_tls_Dispatch'
>> collect2: error: ld returned 1 exit status
>> make[2]: *** [bin/icetTests_mpi_opengl] Error 1
>> make[1]: ***
>> [ThirdParty/IceT/vtkicet/tests/CMakeFiles/icetTests_mpi_opengl.dir/all]
>> Error 2
>> make: *** [all] Error 2
>>
>> I guess the compiler is picking up that library on it's own. Any ideas on
>> what this problem is? The compilation goes all the way to 94% .. in serial
>> mode though!
>>
>> ganesh
>>
>> On Wed, Feb 17, 2016 at 12:34 PM Utkarsh Ayachit <
>> utkarsh.ayachit at kitware.com> wrote:
>>
>>> Just set libGLU to empty. If I am not mistaken, it's optional (only
>>> needed for some testing and GMV reader from VisItBridge which you can
>>> disable).
>>>
>>>
>>>
>>> On Wed, Feb 17, 2016 at 2:26 PM, Ganesh Vijayakumar
>>> <ganesh.iitm at gmail.com> wrote:
>>> > Hello,
>>> >
>>> >   I'm trying to install Paraview-v5.0.0 with OS Mesa for off screen
>>> > rendering using cmake. I was following instructions from the wiki. I
>>> > installed the mesa libraries first.
>>> >
>>> > #From Paraview wiki
>>> > ./configure --disable-xvmc --disable-glx --disable-dri
>>> --with-dri-drivers=""
>>> > --with-gallium-drivers="swrast" --enable-texture-float
>>> > --disable-shared-glapi -\
>>> > -disable-egl --with-egl-platforms="" --enable-gallium-osmesa
>>> > --enable-gallium-llvm=yes --with-llvm-shared-libs
>>> >
>>> > I had issues with "-disable-shared-glapi". Then on
>>> > http://comments.gmane.org/gmane.comp.science.paraview.user/26440, I
>>> saw that
>>> > this option was removed. Now it compiles ok.
>>> >
>>> > ./configure --disable-xvmc --disable-glx --disable-dri
>>> --with-dri-drivers=
>>> > --with-gallium-drivers=swrast --enable-texture-float --disable-egl
>>> > --with-egl-plat\
>>> > forms= --enable-gallium-osmesa --enable-gallium-llvm=yes
>>> > --prefix=/storage/home/guv106/Installers/Paraview/mesa-11.1.2 &>
>>> > log.configure
>>> >
>>> > Moving on after installing a new cmake with SSL compatibility that
>>> finds the
>>> > right python etc. , I get this error now when compiling paraview
>>> >
>>> > /usr/lib64/libGL.so.1: undefined reference to `_glapi_tls_Dispatch'
>>> >
>>> > I see that the wiki asks me to use the system libGLU as
>>> > -DOPENGL_glu_LIBRARY={MESA_INSTALL_PREFIX}/lib/libGLU.[so|a] \,
>>> however,
>>> > that library on my system refers to the system libGL instead of the
>>> > libOSMesa.so I just installed. How do I get around this? I'm unable to
>>> > install libGLU from freedesktop myself because it seem to need GL. Any
>>> > ideas? Am I missing some obvious step here? Should I attach my
>>> > CMakeCache.txt?
>>> >
>>> > ganesh
>>> >
>>> > _______________________________________________
>>> > Powered by www.kitware.com
>>> >
>>> > Visit other Kitware open-source projects at
>>> > http://www.kitware.com/opensource/opensource.html
>>> >
>>> > Please keep messages on-topic and check the ParaView Wiki at:
>>> > http://paraview.org/Wiki/ParaView
>>> >
>>> > Search the list archives at: http://markmail.org/search/?q=ParaView
>>> >
>>> > Follow this link to subscribe/unsubscribe:
>>> > http://public.kitware.com/mailman/listinfo/paraview
>>> >
>>>
>>
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From ganesh.iitm at gmail.com  Thu Feb 18 17:25:46 2016
From: ganesh.iitm at gmail.com (Ganesh Vijayakumar)
Date: Thu, 18 Feb 2016 22:25:46 +0000
Subject: [Paraview] Parallel reading of data using pvbatch + python
Message-ID: <CAFtK+evuXJ35NoszmUJOEYKFrFtUnXg1y-g0xiNHyqFabtLYjg@mail.gmail.com>

Hello,

  I'm working with a dataset in tecplot format. Each processor generates a
separate file for its own part of the domain. I read all of them in, merge
the datasets using the group datasets filter and then visualize them (make
contours etc.).

nProcs = len(glob.glob('scalar-*dat'))
allOutData = []

for i in range(1,nProcs+1):
    # create a new 'Tecplot Reader'

allOutData.append(TecplotReader(FileNames=['out-{}-{:05d}.dat'.format(sys.argv[1],i)]))
    allOutData[-1].DataArrayStatus = ['u', 'v', 'w', 'P', 'phi', 'node']

# # create a new 'Group Datasets'
groupDatasets1 = GroupDatasets(Input=allOutData)

How can I speed this up? The reading of the data seems to be the most time
consuming part. So running paraview in parallel is not really helping as
now each processor has to read all the files as opposed to just one
processor eariler.

ganesh
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From archaerolog at mail.ru  Fri Feb 19 05:13:20 2016
From: archaerolog at mail.ru (Gena Bug)
Date: Fri, 19 Feb 2016 13:13:20 +0300
Subject: [Paraview]  can't cmake pv5
Message-ID: <56C6EAC0.6010609@mail.ru>

Hi!

I was trying to build pv5 with mpi and osmesa and couldn't pass cmake 
step. I use this command:

~/bin/cmake/bin/cmake -G "Unix Makefiles" \
-DBUILD_TESTING=OFF \
-DPARAVIEW_USE_MPI=ON \
-DPYTHON_LIBRARY="/home/gennadiy/bin/python/lib/libpython2.7.a" \
-DPYTHON_INCLUDE_DIR="/home/gennadiy/bin/python/include/python2.7" \
-DPYTHON_EXECUTABLE="/home/gennadiy/bin/python/bin/python" \
-DPARAVIEW_ENABLE_PYTHON=ON \
-DPARAVIEW_BUILD_QT_GUI=OFF \
-DVTK_USE_X=OFF \
-DOPENGL_INCLUDE_DIR="/home/gennadiy/bin/mesa/include" \
-DOPENGL_gl_LIBRARY="/home/gennadiy/bin/mesa/lib/libOSMesa.so" \
-DOPENGL_glu_LIBRARY="" \
-DVTK_OPENGL_HAS_OSMESA=ON \
-DOSMESA_INCLUDE_DIR="/home/gennadiy/bin/mesa/include" \
-DOSMESA_LIBRARY="/home/gennadiy/bin/mesa/lib/libOSMesa.so" \
-DCMAKE_INSTALL_PREFIX="/home/gennadiy/bin/paraview" \
-DCMAKE_CXX_COMPILER="mpiicpc" \
-DCMAKE_C_COMPILER="mpiicc" \
-DCMAKE_Fortran_COMPILER="mpiifort" \
-DCMAKE_BUILD_TYPE=RELEASE \
-DCMAKE_CXX_FLAGS_RELEASE=" -O2 -DNDEBUG " \
-DCMAKE_C_FLAGS_RELEASE=" -O2 -DNDEBUG " \
<path>

(cmake 3.4.1, 3.4.3 and 3.5rc3 downloaded from the site, custom python 
2.7.11 and mesa 11.1.2 were used.)

and at the end of its output I see this:
{{{
...
-- Configuring incomplete, errors occurred!
See also "/home/gennadiy/bin/pv.build/CMakeFiles/CMakeOutput.log".
See also "/home/gennadiy/bin/pv.build/CMakeFiles/CMakeError.log".
}}}

Both log-files contain a lot of information however I can't figure out 
the real problem -- both contain the output from failed tests and 
nothing about why configuration failed.

Stdout also looks normal except messages about sizeof types:
{{{
...
-- HDF5: Performing Other Test HAVE_STAT64_STRUCT - Success
-- Looking for fstat64
-- Looking for fstat64 - found
-- Looking for stat64
-- Looking for stat64 - found
-- Check size of char
CMake Error at 
/home/gennadiy/bin/cmake/share/cmake-3.4/Modules/CheckTypeSize.cmake:124 
(try_compile):
   Cannot copy output executable

     ''

   to destination specified by COPY_FILE:

 
'/home/gennadiy/bin/pv.build/CMakeFiles/CheckTypeSize/H5_SIZEOF_CHAR.bin'

   Unable to find the executable at any of:

     /home/gennadiy/bin/pv.build/CMakeFiles/CMakeTmp/cmTC_bf5e7
     /home/gennadiy/bin/pv.build/CMakeFiles/CMakeTmp/Debug/cmTC_bf5e7
     /home/gennadiy/bin/pv.build/CMakeFiles/CMakeTmp/Development/cmTC_bf5e7

Call Stack (most recent call first):
 
/home/gennadiy/bin/cmake/share/cmake-3.4/Modules/CheckTypeSize.cmake:249 
(__check_type_size_impl)
   VTK/ThirdParty/hdf5/vtkhdf5/config/cmake/ConfigureChecks.cmake:512 
(CHECK_TYPE_SIZE)
   VTK/ThirdParty/hdf5/vtkhdf5/config/cmake/ConfigureChecks.cmake:519 
(H5_CHECK_TYPE_SIZE)
   VTK/ThirdParty/hdf5/vtkhdf5/CMakeLists.txt:276 (include)
...
}}}

Can anyone point me to a real problem?
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From dennis_conklin at goodyear.com  Fri Feb 19 10:52:28 2016
From: dennis_conklin at goodyear.com (Dennis Conklin)
Date: Fri, 19 Feb 2016 15:52:28 +0000
Subject: [Paraview] Get the name of a dataset
Message-ID: <SN1PR0701MB20290D84F888E0C65495A4B49FA00@SN1PR0701MB2029.namprd07.prod.outlook.com>

Peter,

You could add a fake (point or cell) variable from the Calculator and then test for that in the Programmable Filter
Variable ->    Name:DataSetName  (=0?)

Within the filter you could search the keys for "Name:" and split out the DataSetName.

Not very clean, but doable.

If you run a python script you could access the filename, run a Calculator filter to add the variable and then call the Programmable filter to extract the name and use it.   That method should be able to be automated.

YMMV

Dennis
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From david.larsson at sth.kth.se  Fri Feb 19 11:25:07 2016
From: david.larsson at sth.kth.se (David Larsson)
Date: Fri, 19 Feb 2016 16:25:07 +0000
Subject: [Paraview] Cut plane average velocity over time
In-Reply-To: <0EB9B6375711A04B820E6B6F5CCA9F684357D9DF@MBX211.d.ethz.ch>
References: <f478ba8b5ddb4d199952c52bf31c2415@exdb01.ug.kth.se>,
 <0EB9B6375711A04B820E6B6F5CCA9F684357D9DF@MBX211.d.ethz.ch>
Message-ID: <1455899106615.82391@sth.kth.se>

Dear Jean,


thanks for the helpful advice!


However one question: aren't you right now creating a time average in for each point on a plane (or given input source)? What I was looking for was finding out the average value over a plane, and seeing how this changes over time. Can this be done in a similar fashion? Being new to paraview/python I'm though not really sure how...


Another question is regarding the output: How can I access the annoted outvalue (assigned in 'output.PointData.append(self.temp_data/self.tlen,'myOutputValueName'). Again, now it is in point data, but assuming I can get a single scalar value of the average value over a plane, how could I save this (for each time step) such that I can plot or evaluate it later on?


Again, thanks for your time and help.


/David


________________________________
Fr?n: Favre Jean <jfavre at cscs.ch>
Skickat: den 16 februari 2016 11:11
Till: David Larsson; paraview at paraview.org
?mne: RE: Cut plane average velocity over time

>> I would like to get an average over an entire cut plane (over time).

David

This sounds like a perfect case for a Python Programmable Filter, looping over timesteps, accumulating data, doing the average, and setting it as a new field. Here is a script I have tested on a single block of data with multiple timesteps.

There is an init phase, to get the number of timesteps, their values (from upstream), and the first dataset at the 0-th timestep.
There is an accumulate phase, where the filter pulls all timesteps, adding to the already existing numpy array.
There is a finish phase, where we do the average and assign it to a new field.

I am doing it for Pressure, you'll have to adapt it to your fieldnames and block structures.

-----------------
Jean M. Favre
Swiss National Supercomputing Center
CH-6900 Lugano
Switzerland
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From chuck.atkins at kitware.com  Fri Feb 19 11:42:26 2016
From: chuck.atkins at kitware.com (Chuck Atkins)
Date: Fri, 19 Feb 2016 11:42:26 -0500
Subject: [Paraview] can't cmake pv5
In-Reply-To: <56C6EAC0.6010609@mail.ru>
References: <56C6EAC0.6010609@mail.ru>
Message-ID: <CAOXZzG7Sxuj2r2CxRzCdAtd8XbFY1=4WUAHavwGOYh10Sgabtw@mail.gmail.com>

Hi Gena,

Sometime oddities like this show up when different compiler wrappers are
being used.  In this case, your using the Intel MPI wrappers for all
compilations.  Try bypassing them for the main compilation and only using
them for MPI detection:

CC=icc CXX=icpc FC=ifort \
cmake \
  -DMPI_C_COMPILER=mpiicc \
  -DMPI_CXX_COMPILER=mpiicpc \
  -DMPI_Fortran_COMPILER=mpiifort \
  <rest_of_cmake options>

- Chuck

On Fri, Feb 19, 2016 at 5:13 AM, Gena Bug <archaerolog at mail.ru> wrote:

> Hi!
>
> I was trying to build pv5 with mpi and osmesa and couldn't pass cmake
> step. I use this command:
>
> ~/bin/cmake/bin/cmake -G "Unix Makefiles" \
> -DBUILD_TESTING=OFF \
> -DPARAVIEW_USE_MPI=ON \
> -DPYTHON_LIBRARY="/home/gennadiy/bin/python/lib/libpython2.7.a" \
> -DPYTHON_INCLUDE_DIR="/home/gennadiy/bin/python/include/python2.7" \
> -DPYTHON_EXECUTABLE="/home/gennadiy/bin/python/bin/python" \
> -DPARAVIEW_ENABLE_PYTHON=ON \
> -DPARAVIEW_BUILD_QT_GUI=OFF \
> -DVTK_USE_X=OFF \
> -DOPENGL_INCLUDE_DIR="/home/gennadiy/bin/mesa/include" \
> -DOPENGL_gl_LIBRARY="/home/gennadiy/bin/mesa/lib/libOSMesa.so" \
> -DOPENGL_glu_LIBRARY="" \
> -DVTK_OPENGL_HAS_OSMESA=ON \
> -DOSMESA_INCLUDE_DIR="/home/gennadiy/bin/mesa/include" \
> -DOSMESA_LIBRARY="/home/gennadiy/bin/mesa/lib/libOSMesa.so" \
> -DCMAKE_INSTALL_PREFIX="/home/gennadiy/bin/paraview" \
> -DCMAKE_CXX_COMPILER="mpiicpc" \
> -DCMAKE_C_COMPILER="mpiicc" \
> -DCMAKE_Fortran_COMPILER="mpiifort" \
> -DCMAKE_BUILD_TYPE=RELEASE \
> -DCMAKE_CXX_FLAGS_RELEASE=" -O2 -DNDEBUG " \
> -DCMAKE_C_FLAGS_RELEASE=" -O2 -DNDEBUG " \
> <path>
>
> (cmake 3.4.1, 3.4.3 and 3.5rc3 downloaded from the site, custom python
> 2.7.11 and mesa 11.1.2 were used.)
>
> and at the end of its output I see this:
> {{{
> ...
> -- Configuring incomplete, errors occurred!
> See also "/home/gennadiy/bin/pv.build/CMakeFiles/CMakeOutput.log".
> See also "/home/gennadiy/bin/pv.build/CMakeFiles/CMakeError.log".
> }}}
>
> Both log-files contain a lot of information however I can't figure out the
> real problem -- both contain the output from failed tests and nothing about
> why configuration failed.
>
> Stdout also looks normal except messages about sizeof types:
> {{{
> ...
> -- HDF5: Performing Other Test HAVE_STAT64_STRUCT - Success
> -- Looking for fstat64
> -- Looking for fstat64 - found
> -- Looking for stat64
> -- Looking for stat64 - found
> -- Check size of char
> CMake Error at
> /home/gennadiy/bin/cmake/share/cmake-3.4/Modules/CheckTypeSize.cmake:124
> (try_compile):
>   Cannot copy output executable
>
>     ''
>
>   to destination specified by COPY_FILE:
>
>
> '/home/gennadiy/bin/pv.build/CMakeFiles/CheckTypeSize/H5_SIZEOF_CHAR.bin'
>
>   Unable to find the executable at any of:
>
>     /home/gennadiy/bin/pv.build/CMakeFiles/CMakeTmp/cmTC_bf5e7
>     /home/gennadiy/bin/pv.build/CMakeFiles/CMakeTmp/Debug/cmTC_bf5e7
>     /home/gennadiy/bin/pv.build/CMakeFiles/CMakeTmp/Development/cmTC_bf5e7
>
> Call Stack (most recent call first):
>
> /home/gennadiy/bin/cmake/share/cmake-3.4/Modules/CheckTypeSize.cmake:249
> (__check_type_size_impl)
>   VTK/ThirdParty/hdf5/vtkhdf5/config/cmake/ConfigureChecks.cmake:512
> (CHECK_TYPE_SIZE)
>   VTK/ThirdParty/hdf5/vtkhdf5/config/cmake/ConfigureChecks.cmake:519
> (H5_CHECK_TYPE_SIZE)
>   VTK/ThirdParty/hdf5/vtkhdf5/CMakeLists.txt:276 (include)
> ...
> }}}
>
> Can anyone point me to a real problem?
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From wascott at sandia.gov  Fri Feb 19 13:09:05 2016
From: wascott at sandia.gov (Scott, W Alan)
Date: Fri, 19 Feb 2016 18:09:05 +0000
Subject: [Paraview] Transforming vs transform filter
Message-ID: <da3181ef644b4caea639d43476509a81@ES01AMSNLNT.srn.sandia.gov>


Why are the Properties tab/ Transforming controls and the Transform filter different?

The Properties Tab/ Transforming looks like this:

*         Translation

*         Scale

*         Orientation

*         Origin

The Transform filter looks like this:

*         Translate

*         Rotate

*         Scale

Thanks,

Alan

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From megdich_islem at yahoo.fr  Mon Feb 22 08:48:20 2016
From: megdich_islem at yahoo.fr (Megdich Islem)
Date: Mon, 22 Feb 2016 13:48:20 +0000 (UTC)
Subject: [Paraview] question-filter
References: <844884505.12470884.1456148900560.JavaMail.yahoo.ref@mail.yahoo.com>
Message-ID: <844884505.12470884.1456148900560.JavaMail.yahoo@mail.yahoo.com>

Hello,
I am new to paraview, and I didn't find a forum under paraview website to ask my question.My question is is there any filter in paraview that lets to compute the evolution of a quantity within a specific volume of the mesh.
Regards,Islem
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From cory.quammen at kitware.com  Mon Feb 22 08:53:41 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Mon, 22 Feb 2016 08:53:41 -0500
Subject: [Paraview] question-filter
In-Reply-To: <844884505.12470884.1456148900560.JavaMail.yahoo@mail.yahoo.com>
References: <844884505.12470884.1456148900560.JavaMail.yahoo.ref@mail.yahoo.com>
 <844884505.12470884.1456148900560.JavaMail.yahoo@mail.yahoo.com>
Message-ID: <CAB5Fpx49QM_4xZ_31erdtc9+mDpa8ao2_iSQtq1vaU-Bk7uB4g@mail.gmail.com>

Hi Islem,

This is the place to ask ParaView questions! There is some activity on
StackOverflow, but most people ask questions on this mailing list.

Could you clarify what you want to compute? Do you just want to subset
a volume mesh and display the results over time? Do you want to
compute one quantity and display it as a graph over time? Do you want
to compute a single number from a time series data set?

Thanks,
Cory

On Mon, Feb 22, 2016 at 8:48 AM, Megdich Islem <megdich_islem at yahoo.fr> wrote:
> Hello,
>
> I am new to paraview, and I didn't find a forum under paraview website to
> ask my question.
> My question is is there any filter in paraview that lets to compute the
> evolution of a quantity within a specific volume of the mesh.
>
> Regards,
> Islem
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.

From megdich_islem at yahoo.fr  Mon Feb 22 09:09:43 2016
From: megdich_islem at yahoo.fr (Megdich Islem)
Date: Mon, 22 Feb 2016 14:09:43 +0000 (UTC)
Subject: [Paraview] question-filter
In-Reply-To: <CAB5Fpx49QM_4xZ_31erdtc9+mDpa8ao2_iSQtq1vaU-Bk7uB4g@mail.gmail.com>
References: <CAB5Fpx49QM_4xZ_31erdtc9+mDpa8ao2_iSQtq1vaU-Bk7uB4g@mail.gmail.com>
Message-ID: <20140715.12729221.1456150184000.JavaMail.yahoo@mail.yahoo.com>

Hi Cory,
Thank you very much for your prompt reply. I've attached here a picture that illustrates my problem. I am working on the break of bund walls and I want to compute the volume of water that overtops the bund wall (walls surrounding storage tank), after the ?solution reaches the steady state.?
Regards,Islem 

    Le Lundi 22 f?vrier 2016 13h53, Cory Quammen <cory.quammen at kitware.com> a ?crit :
 

 Hi Islem,

This is the place to ask ParaView questions! There is some activity on
StackOverflow, but most people ask questions on this mailing list.

Could you clarify what you want to compute? Do you just want to subset
a volume mesh and display the results over time? Do you want to
compute one quantity and display it as a graph over time? Do you want
to compute a single number from a time series data set?

Thanks,
Cory

On Mon, Feb 22, 2016 at 8:48 AM, Megdich Islem <megdich_islem at yahoo.fr> wrote:
> Hello,
>
> I am new to paraview, and I didn't find a forum under paraview website to
> ask my question.
> My question is is there any filter in paraview that lets to compute the
> evolution of a quantity within a specific volume of the mesh.
>
> Regards,
> Islem
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.


  
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From cory.quammen at kitware.com  Mon Feb 22 09:22:35 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Mon, 22 Feb 2016 09:22:35 -0500
Subject: [Paraview] question-filter
In-Reply-To: <20140715.12729221.1456150184000.JavaMail.yahoo@mail.yahoo.com>
References: <CAB5Fpx49QM_4xZ_31erdtc9+mDpa8ao2_iSQtq1vaU-Bk7uB4g@mail.gmail.com>
 <20140715.12729221.1456150184000.JavaMail.yahoo@mail.yahoo.com>
Message-ID: <CAB5Fpx5oqZddks3too4E7ESzAaW=jySXcQwLsEBaztAw0=5eEA@mail.gmail.com>

Islem,

There are likely two steps:

1). Threshold your volume to identify only the water-containing cells.
It looks like you have a way to do this already?

2). Compute the volumes of the water-containing cells and summing them up.

You can use the Threshold filter to do number 1 if you have a material
code in the cell data. To compute the volume of the cells, add a
Python Annotation filter to the Threshold filter. Set the Expression
to

algs.sum(algs.volume(inputs[0]))

This uses the numpy-like interface in the Python layer to compute the
volumes of the cells and sum them all up. The Python Annotation filter
should display the volume with a text label in your renderer.

Hope this helps,
Cory

On Mon, Feb 22, 2016 at 9:09 AM, Megdich Islem <megdich_islem at yahoo.fr> wrote:
> Hi Cory,
>
> Thank you very much for your prompt reply. I've attached here a picture that
> illustrates my problem. I am working on the break of bund walls and I want
> to compute the volume of water that overtops the bund wall (walls
> surrounding storage tank), after the  solution reaches the steady state.
>
> Regards,
> Islem
>
>
> Le Lundi 22 f?vrier 2016 13h53, Cory Quammen <cory.quammen at kitware.com> a
> ?crit :
>
>
> Hi Islem,
>
> This is the place to ask ParaView questions! There is some activity on
> StackOverflow, but most people ask questions on this mailing list.
>
> Could you clarify what you want to compute? Do you just want to subset
> a volume mesh and display the results over time? Do you want to
> compute one quantity and display it as a graph over time? Do you want
> to compute a single number from a time series data set?
>
> Thanks,
> Cory
>
> On Mon, Feb 22, 2016 at 8:48 AM, Megdich Islem <megdich_islem at yahoo.fr>
> wrote:
>> Hello,
>>
>> I am new to paraview, and I didn't find a forum under paraview website to
>> ask my question.
>> My question is is there any filter in paraview that lets to compute the
>> evolution of a quantity within a specific volume of the mesh.
>>
>> Regards,
>> Islem
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>
>>
>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
>
>
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.

From M.Deij at marin.nl  Mon Feb 22 09:53:51 2016
From: M.Deij at marin.nl (Deij-van Rijswijk, Menno)
Date: Mon, 22 Feb 2016 14:53:51 +0000
Subject: [Paraview] When building from source with CGNS, include paths are
 not wrapped; GitLab issues broken
Message-ID: <5c2e3466fc8b4ee0bf4b12ac139a28e0@MAR190n2.marin.local>

As per title, when I build from source I configure CMake to use the path to the include file. This path is not propagated to the Wrapping/ClientServer directory, where the build fails complaining about the fact that it can?t find the included header cgnslib.h

I don?t know how to fix this, so I?m hoping anyone who is more at home in the source and CMake can do this.

Also, I tried to add a new issue for this on the gitlab page, but that is broken: 404 for the page https://gitlab.kitware.com/paraview/paraview/issues/new and https://gitlab.kitware.com/paraview/issues/new (I?m not sure if the double paraview/paraview is needed but both don?t work)

It would be nice if I could put an issue directly to GitLab.

Best wishes,


Menno Deij ? van Rijswijk




dr. ir. Menno A. Deij-van Rijswijk | Researcher / Software Engineer | Maritime Simulation & Software Group
MARIN | T +31 317 49 35 06 | M.Deij at marin.nl<mailto:M.Deij at marin.nl> | www.marin.nl<http://www.marin.nl>

[LinkedIn]<https://www.linkedin.com/company/marin> [YouTube] <http://www.youtube.com/marinmultimedia>  [Twitter] <https://twitter.com/MARIN_nieuws>  [Facebook] <https://www.facebook.com/marin.wageningen>
MARIN news: Specialist course for EEDI Verifiers, June 20-24<http://www.marin.nl/web/News/News-items/Specialist-course-for-EEDI-Verifiers-June-2024.htm>


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From grothausmann.roman at mh-hannover.de  Mon Feb 22 11:27:26 2016
From: grothausmann.roman at mh-hannover.de (Grothausmann, Roman Dr.)
Date: Mon, 22 Feb 2016 17:27:26 +0100
Subject: [Paraview] pvpython script to create a screen shot of a PVSM
Message-ID: <56CB36EE.2010306@mh-hannover.de>

Dear mailing list members,


I'm trying to write a simple pvpython script that merely takes a screen shot of 
a loaded PVSM:
https://github.com/romangrothausmann/ParaView_scripts/blob/master/render-view.py

However, even if a voxel dataset is displayed as a volume when loaded in PV GUI, 
it does not get rendered by the script.
I've tried to explicitly set the rendering style to Volume and assigned a 
OpacityTransferFunction (as told here: 
http://www.paraview.org/pipermail/paraview/2013-November/029918.html)
Furthermore, the camera position stored in the PVSM does not seem to get loaded, 
nor whether an object is hidden.
What else do I need to do in the script to get PV GUI behaviour?

Also, what to do about this warning:
vtkSMProxyIterator (0x61ef820): ProxyManager is not set. Can not perform 
operation: Begin()


Any help or hints are very much appreciated
Roman



-- 
Dr. Roman Grothausmann

Tomographie und Digitale Bildverarbeitung
Tomography and Digital Image Analysis

Institut f?r Funktionelle und Angewandte Anatomie, OE 4120
Medizinische Hochschule Hannover
Carl-Neuberg-Str. 1
D-30625 Hannover

Tel. +49 511 532-2900

From jfavre at cscs.ch  Mon Feb 22 11:33:53 2016
From: jfavre at cscs.ch (Favre  Jean)
Date: Mon, 22 Feb 2016 16:33:53 +0000
Subject: [Paraview] GenerateGhostArray in a programmable source
Message-ID: <0EB9B6375711A04B820E6B6F5CCA9F6843583CEA@MBX211.d.ethz.ch>


I am prototyping an AMR output, using programmable source.
having trouble setting up the GhostArray. The following returns None:


grid0 = vtk.vtkUniformGrid() grid0.GenerateGhostArray(exts, True)

ga = grid0.GetCellGhostArray()

I am setting it this way instead of using vtkAMRBox because my input file already
has the cell-data for the blanking. Problem is GetCellGhostArray() returns None.

cf: https://blog.kitware.com/ghost-and-blanking-visibility-changes/

-----------------
Jean/CSCS
<http://www.marin.nl/web/News/News-items/Specialist-course-for-EEDI-Verifiers-June-2024.htm>
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From david.larsson at sth.kth.se  Mon Feb 22 15:00:01 2016
From: david.larsson at sth.kth.se (David Larsson)
Date: Mon, 22 Feb 2016 20:00:01 +0000
Subject: [Paraview] Cut plane average velocity over time
In-Reply-To: <1455899106615.82391@sth.kth.se>
References: <f478ba8b5ddb4d199952c52bf31c2415@exdb01.ug.kth.se>,
 <0EB9B6375711A04B820E6B6F5CCA9F684357D9DF@MBX211.d.ethz.ch>,
 <1455899106615.82391@sth.kth.se>
Message-ID: <1456171201023.19261@sth.kth.se>

Hi again Jean,


sorry for the spamming. Just an additional question to what we discussed below:


Working a bit with what you gave me have led to some more problems/questions:


If I try to adapt your script (simply changing to a Slice or Threshold I use, and setting [\'PRES\'] to, in my case, Velocity, I end up in a endless loop where the program gets stuck in the first time step. However, I can't seem to understand why that is. I can see that data is loaded correctly into a vtkArray (if I simply run print(data)) but anyhow doesn't continue beyond the first loop.


Also, I would like to visualize the resulting average value on the same geometry that I loaded. Exiting from the python shell I can't though find my output values. Does anyone know how to give back calculated values to your model such that you can visualize it further in paraview?


FYI a few time steps of my model can be downloaded from here

https://app.box.com/s/u33085me6hh5tuzzb0kbjbpp9i8u9kdx in case anyone is interested.


Again thanks for all the help,


/David


________________________________
Fr?n: ParaView <paraview-bounces at paraview.org> f?r David Larsson <david.larsson at sth.kth.se>
Skickat: den 19 februari 2016 17:25
Till: Favre Jean; paraview at paraview.org
?mne: Re: [Paraview] Cut plane average velocity over time


Dear Jean,


thanks for the helpful advice!


However one question: aren't you right now creating a time average in for each point on a plane (or given input source)? What I was looking for was finding out the average value over a plane, and seeing how this changes over time. Can this be done in a similar fashion? Being new to paraview/python I'm though not really sure how...


Another question is regarding the output: How can I access the annoted outvalue (assigned in 'output.PointData.append(self.temp_data/self.tlen,'myOutputValueName'). Again, now it is in point data, but assuming I can get a single scalar value of the average value over a plane, how could I save this (for each time step) such that I can plot or evaluate it later on?


Again, thanks for your time and help.


/David


________________________________
Fr?n: Favre Jean <jfavre at cscs.ch>
Skickat: den 16 februari 2016 11:11
Till: David Larsson; paraview at paraview.org
?mne: RE: Cut plane average velocity over time

>> I would like to get an average over an entire cut plane (over time).

David

This sounds like a perfect case for a Python Programmable Filter, looping over timesteps, accumulating data, doing the average, and setting it as a new field. Here is a script I have tested on a single block of data with multiple timesteps.

There is an init phase, to get the number of timesteps, their values (from upstream), and the first dataset at the 0-th timestep.
There is an accumulate phase, where the filter pulls all timesteps, adding to the already existing numpy array.
There is a finish phase, where we do the average and assign it to a new field.

I am doing it for Pressure, you'll have to adapt it to your fieldnames and block structures.

-----------------
Jean M. Favre
Swiss National Supercomputing Center
CH-6900 Lugano
Switzerland
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From archaerolog at mail.ru  Mon Feb 22 15:52:24 2016
From: archaerolog at mail.ru (Gena Bug)
Date: Mon, 22 Feb 2016 23:52:24 +0300
Subject: [Paraview] can't cmake pv5
In-Reply-To: <CAOXZzG7Sxuj2r2CxRzCdAtd8XbFY1=4WUAHavwGOYh10Sgabtw@mail.gmail.com>
References: <56C6EAC0.6010609@mail.ru>
 <CAOXZzG7Sxuj2r2CxRzCdAtd8XbFY1=4WUAHavwGOYh10Sgabtw@mail.gmail.com>
Message-ID: <56CB7508.7060705@mail.ru>

Hi, Chuck!

Thank you for the response, unfortunately it doesn't help:
1. during the cmake step now I see a lot of messages:
{{{
-- Could NOT find MPI_C (missing: MPI_C_LIBRARIES)
-- Could NOT find MPI_CXX (missing: MPI_CXX_LIBRARIES)
-- Could NOT find MPI_Fortran (missing: MPI_Fortran_LIBRARIES)
}}}
2. however, I see "Configuring done" message at the end and
3. then a lot of dev-messages like this one:
{{{
This warning is for project developers. Use -Wno-dev to suppress it.

CMake Warning (dev) in Plugins/SciberQuestToolKit/CMakeLists.txt:
Policy CMP0021 is not set: Fatal error on relative paths in
INCLUDE_DIRECTORIES target property. Run "cmake --help-policy CMP0021" for
policy details. Use the cmake_policy command to set the policy and
suppress this warning.

Found relative path while evaluating include directories of
"vtkSciberQuestCS":

"option"
}}}
4. OK, configuring done, so I type "make" and see this:
{{{
CMake Error: Parse error in cache file 
/home/gennadiy/bin/pv.build/CMakeCache.txt. Offending entry: 
/usr/lib/../lib64/crt1.o:;In;function;`_start':
CMake Error: Parse error in cache file 
/home/gennadiy/bin/pv.build/CMakeCache.txt. Offending entry: 
/usr/src/packages/BUILD/glibc-2.11.1/csu/../sysdeps/x86_64/elf/start.S:109:;undefined;reference;to;`main'
CMake Error: Parse error in cache file 
/home/gennadiy/bin/pv.build/CMakeCache.txt. Offending entry: 
/usr/lib/../lib64/crt1.o:;In;function;`_start':
CMake Error: Parse error in cache file 
/home/gennadiy/bin/pv.build/CMakeCache.txt. Offending entry: 
/usr/src/packages/BUILD/glibc-2.11.1/csu/../sysdeps/x86_64/elf/start.S:109:;undefined;reference;to;`main'
CMake Error: Parse error in cache file 
/home/gennadiy/bin/pv.build/CMakeCache.txt. Offending entry: 
/common/intel/composer_xe_2015.0.090/compiler/lib/intel64/for_main.o:;In;function;`main':
CMake Error: Parse error in cache file 
/home/gennadiy/bin/pv.build/CMakeCache.txt. Offending entry: 
/export/users/nbtester/efi2linux_nightly/branch-15_0/20140724_000000/libdev/frtl/src/libfor/for_main.c:(.text+0x2a):;undefined;reference;to;`MAIN__'
}}}
5. and then cmake (not make!) continues from HDF5 tests and
6. finally
{{{
-- Configuring incomplete, errors occurred!
See also "/home/gennadiy/bin/pv.build/CMakeFiles/CMakeOutput.log".
See also "/home/gennadiy/bin/pv.build/CMakeFiles/CMakeError.log".
}}}



On 19.02.2016 19:42, Chuck Atkins wrote:
> Hi Gena,
>
> Sometime oddities like this show up when different compiler wrappers are
> being used.  In this case, your using the Intel MPI wrappers for all
> compilations.  Try bypassing them for the main compilation and only using
> them for MPI detection:
>
> CC=icc CXX=icpc FC=ifort \
> cmake \
>    -DMPI_C_COMPILER=mpiicc \
>    -DMPI_CXX_COMPILER=mpiicpc \
>    -DMPI_Fortran_COMPILER=mpiifort \
>    <rest_of_cmake options>
>
> - Chuck
>
> On Fri, Feb 19, 2016 at 5:13 AM, Gena Bug <archaerolog at mail.ru> wrote:
>
>> Hi!
>>
>> I was trying to build pv5 with mpi and osmesa and couldn't pass cmake
>> step. I use this command:
>>
>> ~/bin/cmake/bin/cmake -G "Unix Makefiles" \
>> -DBUILD_TESTING=OFF \
>> -DPARAVIEW_USE_MPI=ON \
>> -DPYTHON_LIBRARY="/home/gennadiy/bin/python/lib/libpython2.7.a" \
>> -DPYTHON_INCLUDE_DIR="/home/gennadiy/bin/python/include/python2.7" \
>> -DPYTHON_EXECUTABLE="/home/gennadiy/bin/python/bin/python" \
>> -DPARAVIEW_ENABLE_PYTHON=ON \
>> -DPARAVIEW_BUILD_QT_GUI=OFF \
>> -DVTK_USE_X=OFF \
>> -DOPENGL_INCLUDE_DIR="/home/gennadiy/bin/mesa/include" \
>> -DOPENGL_gl_LIBRARY="/home/gennadiy/bin/mesa/lib/libOSMesa.so" \
>> -DOPENGL_glu_LIBRARY="" \
>> -DVTK_OPENGL_HAS_OSMESA=ON \
>> -DOSMESA_INCLUDE_DIR="/home/gennadiy/bin/mesa/include" \
>> -DOSMESA_LIBRARY="/home/gennadiy/bin/mesa/lib/libOSMesa.so" \
>> -DCMAKE_INSTALL_PREFIX="/home/gennadiy/bin/paraview" \
>> -DCMAKE_CXX_COMPILER="mpiicpc" \
>> -DCMAKE_C_COMPILER="mpiicc" \
>> -DCMAKE_Fortran_COMPILER="mpiifort" \
>> -DCMAKE_BUILD_TYPE=RELEASE \
>> -DCMAKE_CXX_FLAGS_RELEASE=" -O2 -DNDEBUG " \
>> -DCMAKE_C_FLAGS_RELEASE=" -O2 -DNDEBUG " \
>> <path>
>>
>> (cmake 3.4.1, 3.4.3 and 3.5rc3 downloaded from the site, custom python
>> 2.7.11 and mesa 11.1.2 were used.)
>>
>> and at the end of its output I see this:
>> {{{
>> ...
>> -- Configuring incomplete, errors occurred!
>> See also "/home/gennadiy/bin/pv.build/CMakeFiles/CMakeOutput.log".
>> See also "/home/gennadiy/bin/pv.build/CMakeFiles/CMakeError.log".
>> }}}
>>
>> Both log-files contain a lot of information however I can't figure out the
>> real problem -- both contain the output from failed tests and nothing about
>> why configuration failed.
>>
>> Stdout also looks normal except messages about sizeof types:
>> {{{
>> ...
>> -- HDF5: Performing Other Test HAVE_STAT64_STRUCT - Success
>> -- Looking for fstat64
>> -- Looking for fstat64 - found
>> -- Looking for stat64
>> -- Looking for stat64 - found
>> -- Check size of char
>> CMake Error at
>> /home/gennadiy/bin/cmake/share/cmake-3.4/Modules/CheckTypeSize.cmake:124
>> (try_compile):
>>    Cannot copy output executable
>>
>>      ''
>>
>>    to destination specified by COPY_FILE:
>>
>>
>> '/home/gennadiy/bin/pv.build/CMakeFiles/CheckTypeSize/H5_SIZEOF_CHAR.bin'
>>
>>    Unable to find the executable at any of:
>>
>>      /home/gennadiy/bin/pv.build/CMakeFiles/CMakeTmp/cmTC_bf5e7
>>      /home/gennadiy/bin/pv.build/CMakeFiles/CMakeTmp/Debug/cmTC_bf5e7
>>      /home/gennadiy/bin/pv.build/CMakeFiles/CMakeTmp/Development/cmTC_bf5e7
>>
>> Call Stack (most recent call first):
>>
>> /home/gennadiy/bin/cmake/share/cmake-3.4/Modules/CheckTypeSize.cmake:249
>> (__check_type_size_impl)
>>    VTK/ThirdParty/hdf5/vtkhdf5/config/cmake/ConfigureChecks.cmake:512
>> (CHECK_TYPE_SIZE)
>>    VTK/ThirdParty/hdf5/vtkhdf5/config/cmake/ConfigureChecks.cmake:519
>> (H5_CHECK_TYPE_SIZE)
>>    VTK/ThirdParty/hdf5/vtkhdf5/CMakeLists.txt:276 (include)
>> ...
>> }}}
>>
>> Can anyone point me to a real problem?
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>

From samuelkey at bresnan.net  Mon Feb 22 20:00:08 2016
From: samuelkey at bresnan.net (Samuel Key)
Date: Mon, 22 Feb 2016 18:00:08 -0700
Subject: [Paraview] SWKey: Help with VTK XML-Formatted "Writer" Routine.
In-Reply-To: <56C4EAB3.7070307@gmail.com>
References: <56C4D10B.3030007@bresnan.net> <56C4EAB3.7070307@gmail.com>
Message-ID: <56CBAF18.40901@bresnan.net>

Hi Armin,

Thanks for pointing me to the relevant VTK Wiki page!

The information there cleared up my questions about how to incorporate 
an arbitrary n-vertex polyhedral finite element into the VTK 
XML-structured results file for ParaView.

My delayed reply can be attributed to the maelstrom of counters I had to 
introduce into my existing VTK XML Writer. It took a lot of time to get 
everything right. (Luckily, my software has an EnSight Writer that 
handles polyhedral finite elements and I was able to get ParaView to 
convert the 7-cell test mesh into a muti-block *.vtm collection for 
comparison.)

Regards,

Samuel Key
FMA Development, LLC
1005 39th Ave NE
Great Falls, Montana 59404
USA

On 2/17/2016 2:48 PM, Armin Wehrfritz wrote:
> On this wiki page you find information on how polyhedrons are stored 
> in unstructured XML files (search the page for vtkXMLUnstructuredGrid):
> http://www.vtk.org/Wiki/VTK/Polyhedron_Support
>
> Hope it helps.
>
> -Armin
>
>
>
> On 02/17/2016 09:59 PM, Samuel Key wrote:
>> My simulation software has a functioning VTK XML-formatted, "ascii"
>> output routine. To facilitate datum set transfers, I want to add
>> arbitrary, m-vertex polyhedral finite elements to the simulation
>> software's existing Writer (VTK_POLYHEDRON = 42).
>>
>> Originally, I used the VTK File Formats Version 4.2 to construct the
>> program's Writer. It is not clear to me what the XML structures should
>> contain with respect to the polyhedral finite elements.
>>
>> Three files are attached: (1) *.inp is an input snippet for a polyhedral
>> finite element used by the simulation software, (2) *.png is a ParaView
>> screenshot display for this polyhedron read in from an EnSight-formatted
>> file, and (3) *.vtu is a ParaView 'Save Data' output file for this
>> polyhedral finite element.
>>
>> Referring to the *.vtu file, I am having difficulty relating the
>> simulation software's and  EnSight's corresponding input description to
>> the ParaView output description, particularly, "connectivity" and 
>> "faces."
>>
>> Do you have any advice on how I should proceed?
>>
>> Note: The simulation software does not require the polygon faces to be
>> planar, nor the polyhedron volume to be convex. The simulation software
>> computes proper mean quadrature gradient/divergence operators for
>> non-planar facets and a restricted form of polyhedral star-convexity.
>>
>> Thanks in advance for the indicating how I should continue,
>>
>> Samuel Key
>> FMA Development, LLC
>> 1005 39th Ave NE
>> Great Falls, Montana 59404
>> USA
>>
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at 
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at: 
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at 
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: 
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview


From padamsen at grundfos.com  Tue Feb 23 02:10:07 2016
From: padamsen at grundfos.com (Per Adamsen)
Date: Tue, 23 Feb 2016 07:10:07 +0000
Subject: [Paraview] ParticleTracer filter makes Paraview crash on 'play'
In-Reply-To: <CAMaOp+EEAptGp+4KGB2okiHUycrHCGCGi+_vy4HKzYALvVdazg@mail.gmail.com>
References: <AM4PR03MB145721873585FC9CF810F620A4070@AM4PR03MB1457.eurprd03.prod.outlook.com>
 <CAMaOp+EEAptGp+4KGB2okiHUycrHCGCGi+_vy4HKzYALvVdazg@mail.gmail.com>
Message-ID: <AM4PR03MB14574ECE8D9B698131A40062A4A40@AM4PR03MB1457.eurprd03.prod.outlook.com>

Hi Andy,

I just want to refresh this conversation ? sorry for not passing all messages through this mailing list? my mistake.

After I shared the case you wrote that you had tried a few things but with no luck in PV 5.0. As mentioned below I have tried the following 64-bit versions
- 3.98.1 on Win7
- 4.4.0 on Win7
- 4.2.0 on Linux HPC cluster
Regards,
Per


From: Andy Bauer [mailto:andy.bauer at kitware.com]
Sent: 23. november 2015 16:18
To: Per Adamsen <padamsen at grundfos.com>
Cc: paraview at paraview.org
Subject: Re: [Paraview] ParticleTracer filter makes Paraview crash on 'play'

Hi,

My guess is that it has to do with OpenFOAM's way of saving out extra fields for the initial time step. Several temporal filters assume that the arrays are ordered the same for different time steps but the OpenFOAM reader doesn't follow this convention.

Can you share a data set that reproduces the issue?
Andy

On Mon, Nov 23, 2015 at 8:23 AM, Per Adamsen <padamsen at grundfos.com<mailto:padamsen at grundfos.com>> wrote:
Hi,

I have been trying to visualize flow using the particle tracers as described at http://openfoamwiki.net/index.php/HowTo_use_particle_tracer_in_paraFoam.

It works when using it on the cavity tutorial but when I try to transfer the setup to one of my own 3D OpenFOAM cases of a pump volute with e.g. 20 timesteps and 900,000 cells Paraview crashes with a segmentation fault when I hit the ?Play? button to step through the individual timesteps.

The pipeline setup is exactly as described in the HowTo (linked above) and I have tried both with and without the Temporal Interpolator and on Linux and Windows platform ? all with the same crash result.

I have tried the following 64-bit version:
3.98.1 on Win7
4.4.0 on Win7
4.2.0 on Linux HPC cluster

At first I thought the reason for the crash was due to the use of interfaces in the model but I have tried a model without interfaces at all and the result is the same.

Are there any restriction to the data which can be used?

The following is the trace right up to pressing ?Play?:
#### import the simple module from the paraview
from paraview.simple import *
#### disable automatic camera reset on 'Show'
paraview.simple._DisableFirstRenderCameraReset()

# get active source.
q97_volutefoam = GetActiveSource()

# Properties modified on q97_volutefoam
q97_volutefoam.CaseType = 'Decomposed Case'

# get active view
renderView1 = GetActiveViewOrCreate('RenderView')
# uncomment following to set a specific view size
# renderView1.ViewSize = [1025, 773]

# get color transfer function/color map for 'p'
pLUT = GetColorTransferFunction('p')

# show data in view
q97_volutefoamDisplay = Show(q97_volutefoam, renderView1)
# trace defaults for the display properties.
q97_volutefoamDisplay.ColorArrayName = ['POINTS', 'p']
q97_volutefoamDisplay.LookupTable = pLUT
q97_volutefoamDisplay.ScalarOpacityUnitDistance = 0.01089979797382614
q97_volutefoamDisplay.SelectInputVectors = ['POINTS', 'U']
q97_volutefoamDisplay.WriteLog = ''

# reset view to fit data
renderView1.ResetCamera()

# show color bar/color legend
q97_volutefoamDisplay.SetScalarBarVisibility(renderView1, True)

# get animation scene
animationScene1 = GetAnimationScene()

# update animation scene based on data timesteps
animationScene1.UpdateAnimationUsingDataTimeSteps()

# get opacity transfer function/opacity map for 'p'
pPWF = GetOpacityTransferFunction('p')

# create a new 'Plane'
plane1 = Plane()

# Properties modified on q97_volutefoam
q97_volutefoam.CellArrays = ['U', 'k', 'nut', 'omega', 'p', 'gradP', 'myPtot', 'myYPlus', 'uPlus', 'y', 'yPlus']

# Properties modified on plane1
plane1.XResolution = 100
plane1.YResolution = 100

# show data in view
plane1Display = Show(plane1, renderView1)
# trace defaults for the display properties.
plane1Display.ColorArrayName = [None, '']
plane1Display.SelectInputVectors = ['POINTS', 'Normals']
plane1Display.WriteLog = ''

# create a new 'ParticleTracer'
particleTracer1 = ParticleTracer(Input=q97_volutefoam,
    SeedSource=plane1)
particleTracer1.SelectInputVectors = ['POINTS', 'U']

# Properties modified on particleTracer1
particleTracer1.StaticSeeds = 1
particleTracer1.StaticMesh = 1

# show data in view
particleTracer1Display = Show(particleTracer1, renderView1)
# trace defaults for the display properties.
particleTracer1Display.ColorArrayName = ['POINTS', 'p']
particleTracer1Display.LookupTable = pLUT
particleTracer1Display.SelectInputVectors = ['POINTS', 'U']
particleTracer1Display.WriteLog = ''

# hide data in view
Hide(q97_volutefoam, renderView1)

# hide data in view
Hide(plane1, renderView1)

# show color bar/color legend
particleTracer1Display.SetScalarBarVisibility(renderView1, True)

Regards,
Per Adamsen

_______________________________________________
Powered by www.kitware.com<http://www.kitware.com>

Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html

Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView

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From joachim.pouderoux at kitware.com  Tue Feb 23 04:25:58 2016
From: joachim.pouderoux at kitware.com (Joachim Pouderoux)
Date: Tue, 23 Feb 2016 10:25:58 +0100
Subject: [Paraview] GenerateGhostArray in a programmable source
In-Reply-To: <0EB9B6375711A04B820E6B6F5CCA9F6843583CEA@MBX211.d.ethz.ch>
References: <0EB9B6375711A04B820E6B6F5CCA9F6843583CEA@MBX211.d.ethz.ch>
Message-ID: <CACJ=gTjgbYaV6kO46YP9e9Gygq1DQVEsEVnR2mruH4+Qko91fw@mail.gmail.com>

Jean,

By looking at vtkDataSet::GenerateGhostArray() implementation it appears
that ghost cell array will not be created if:
 - the grid extent is not 3D (I supposed it is not your case here)
 - if the the provided extents are the same than the data extents.

You might want to check if this last assertion is not valid for your case.

Best,
Joachim


*Joachim Pouderoux*

*PhD, Technical Expert*
*Kitware SAS <http://www.kitware.fr>*


2016-02-22 17:33 GMT+01:00 Favre Jean <jfavre at cscs.ch>:

>
> I am prototyping an AMR output, using programmable source.
> having trouble setting up the GhostArray. The following returns None:
>
>
> grid0 = vtk.vtkUniformGrid() grid0.GenerateGhostArray(exts, True)
>
> ga = grid0.GetCellGhostArray()
>
> I am setting it this way instead of using vtkAMRBox because my input file already
> has the cell-data for the blanking. Problem is GetCellGhostArray() returns None.
>
> cf: https://blog.kitware.com/ghost-and-blanking-visibility-changes/
>
> -----------------
> Jean/CSCS
>
> <http://www.marin.nl/web/News/News-items/Specialist-course-for-EEDI-Verifiers-June-2024.htm>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From pmopanhx at gmail.com  Tue Feb 23 06:04:54 2016
From: pmopanhx at gmail.com (hengxing pan)
Date: Tue, 23 Feb 2016 19:04:54 +0800
Subject: [Paraview] How to determine that some points are inside some closed
 surfaces or not ?
Message-ID: <CAFJvLTa6vf70DR040h3gz_A1So-zKUEpmzvyGGzjsW9cwqZdQA@mail.gmail.com>

Hi,all

I wrote the lines.vtk in binary format and the points.vtk in ASCII format
according to www.vtk.org/VTK/img/file-formats.pdf.
The attached pictures show the process how I get the tubes(closed surfaces
which I thought the tubes are) ,then I want to find out the points which
are inside the tubes (blue area in the view3), but I don't know how to work
it out.
Now I'm desperate for achieving my aim, so please help me if you know how
to do it !
Thank you in advance !
pan hengxing
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From pmopanhx at gmail.com  Tue Feb 23 06:15:05 2016
From: pmopanhx at gmail.com (hengxing pan)
Date: Tue, 23 Feb 2016 19:15:05 +0800
Subject: [Paraview] How to determine that some points are inside some closed
 surfaces or not ?
Message-ID: <CAFJvLTaVeU7D38uU4o6mUSEJe8Q5XFCD7VC5NsvOyDO2z4+uGw@mail.gmail.com>

Hi,all

I wrote the lines.vtk in binary format and the points.vtk in ASCII format
according to www.vtk.org/VTK/img/file-formats.pdf.
The attached pictures show the process how I get the tubes(closed surfaces
which I thought the tubes are) ,then I want to find out the points which
are inside the tubes (blue area in the view3), but I don't know how to work
it out.
Now I'm desperate for achieving my aim, so please help me if you know how
to do it !
Thank you in advance !
pan hengxing
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From M.Deij at marin.nl  Tue Feb 23 06:21:09 2016
From: M.Deij at marin.nl (Deij-van Rijswijk, Menno)
Date: Tue, 23 Feb 2016 11:21:09 +0000
Subject: [Paraview] When building from source with CGNS, include paths
 are not wrapped; GitLab issues broken
In-Reply-To: <5c2e3466fc8b4ee0bf4b12ac139a28e0@MAR190n2.marin.local>
References: <5c2e3466fc8b4ee0bf4b12ac139a28e0@MAR190n2.marin.local>
Message-ID: <20e6ee29fe8c4b749423b29ee4ecee9d@MAR190n2.marin.local>

Ok, I found the problem and fixed it ? the changes in CMakeLists.txt are awaiting approval here
https://gitlab.kitware.com/paraview/paraview/merge_requests/649

The issues page https://gitlab.kitware.com/paraview/paraview/issues/new is still unavailable though.

Best wishes,


Menno Deij ? van Rijswijk



dr. ir. Menno A. Deij-van Rijswijk | Researcher / Software Engineer | Maritime Simulation & Software Group
MARIN | T +31 317 49 35 06 | M.Deij at marin.nl<mailto:M.Deij at marin.nl> | www.marin.nl<http://www.marin.nl>

[LinkedIn]<https://www.linkedin.com/company/marin> [YouTube] <http://www.youtube.com/marinmultimedia>  [Twitter] <https://twitter.com/MARIN_nieuws>  [Facebook] <https://www.facebook.com/marin.wageningen>
MARIN news: Accurate calculation models for manoeuvring simulations<http://www.marin.nl/web/News/News-items/Accurate-calculation-models-for-manoeuvring-simulations-1.htm>
From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Deij-van Rijswijk, Menno
Sent: Monday, February 22, 2016 3:54 PM
To: paraview at paraview.org
Subject: [Paraview] When building from source with CGNS, include paths are not wrapped; GitLab issues broken

As per title, when I build from source I configure CMake to use the path to the include file. This path is not propagated to the Wrapping/ClientServer directory, where the build fails complaining about the fact that it can?t find the included header cgnslib.h

I don?t know how to fix this, so I?m hoping anyone who is more at home in the source and CMake can do this.

Also, I tried to add a new issue for this on the gitlab page, but that is broken: 404 for the page https://gitlab.kitware.com/paraview/paraview/issues/new and https://gitlab.kitware.com/paraview/issues/new (I?m not sure if the double paraview/paraview is needed but both don?t work)

It would be nice if I could put an issue directly to GitLab.

Best wishes,


Menno Deij ? van Rijswijk




dr. ir. Menno A. Deij-van Rijswijk | Researcher / Software Engineer | Maritime Simulation & Software Group
MARIN | T +31 317 49 35 06 | M.Deij at marin.nl<mailto:M.Deij at marin.nl> | www.marin.nl<http://www.marin.nl>

[LinkedIn]<https://www.linkedin.com/company/marin> [YouTube] <http://www.youtube.com/marinmultimedia>  [Twitter] <https://twitter.com/MARIN_nieuws>  [Facebook] <https://www.facebook.com/marin.wageningen>
MARIN news: Specialist course for EEDI Verifiers, June 20-24<http://www.marin.nl/web/News/News-items/Specialist-course-for-EEDI-Verifiers-June-2024.htm>


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From ivan.schrooyen at gmail.com  Tue Feb 23 06:25:31 2016
From: ivan.schrooyen at gmail.com (Ivan Schrooyen)
Date: Tue, 23 Feb 2016 12:25:31 +0100
Subject: [Paraview] Export surface to CGNS format
Message-ID: <CACWO_A0qFfp9-L_CRSGP7y82aPKzGUVvxfqRSwi4uUB4Xg9pkA@mail.gmail.com>

Hello

I have tried to submit this topic to the mailing list but did not have any
answer...

I am working with a CFD free surface code.
I have a .vtu volume solution from which I extract one surface which is my
body and another which is my free surface.
I would like to export both surfaces in one CGNS file.
Do you have any idea how I could do that ?

Thanks in advance,
Ivan
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From ruggiero.guida at gmail.com  Tue Feb 23 09:14:05 2016
From: ruggiero.guida at gmail.com (Ruggiero Guida)
Date: Tue, 23 Feb 2016 14:14:05 +0000
Subject: [Paraview] CellDataToPointData much slower in 5.0?
Message-ID: <CA+U776BXLbzgeybPwu+VhP5bvbZwskVTjYGfejBb3wFHg79_ZQ@mail.gmail.com>

Hi,

I am testing Paraview 5.0 on MacOS X Yosemite and I have noticed that the
CellDataToPointData filter has become very, very slow.

I am visualizing a timeseries and each timestep may take up to 2 seconds to
be visualized.

In order to verify I have reinstalled 4.4 and everything is smooth as
always.

Any suggestion on why this is happening? Is there any default parameter
that I should set?

Thanks
Ruggiero
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From cory.quammen at kitware.com  Tue Feb 23 09:14:32 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Tue, 23 Feb 2016 09:14:32 -0500
Subject: [Paraview] When building from source with CGNS, include paths
 are not wrapped; GitLab issues broken
In-Reply-To: <20e6ee29fe8c4b749423b29ee4ecee9d@MAR190n2.marin.local>
References: <5c2e3466fc8b4ee0bf4b12ac139a28e0@MAR190n2.marin.local>
 <20e6ee29fe8c4b749423b29ee4ecee9d@MAR190n2.marin.local>
Message-ID: <CAB5Fpx7gORcTr2m=3WAZGYh+iEgbhm2a5+CJRK8=TiYajZw=nQ@mail.gmail.com>

Hi,

Thank you for the bug fix. I've invoked the testing infrastructure on your
branch and will follow up with a review. The change looks simple enough.

Currently, we are not using GitLab's issue tracker, hence the error you
see. Bug reports for ParaView can be posted here:

http://www.paraview.org/Bug/

Thanks,
Cory

On Tue, Feb 23, 2016 at 6:21 AM, Deij-van Rijswijk, Menno <M.Deij at marin.nl>
wrote:

> Ok, I found the problem and fixed it ? the changes in CMakeLists.txt are
> awaiting approval here
>
> https://gitlab.kitware.com/paraview/paraview/merge_requests/649
>
>
>
> The issues page https://gitlab.kitware.com/paraview/paraview/issues/new
> is still unavailable though.
>
>
>
> Best wishes,
>
>
>
>
>
> Menno Deij ? van Rijswijk
>
>
>
>
>
> dr. ir. Menno A. Deij-van Rijswijk | Researcher / Software Engineer | Maritime
> Simulation & Software Group
> MARIN | T +31 317 49 35 06 | M.Deij at marin.nl | www.marin.nl
>
> [image: LinkedIn] <https://www.linkedin.com/company/marin> [image:
> YouTube] <http://www.youtube.com/marinmultimedia> [image: Twitter]
> <https://twitter.com/MARIN_nieuws> [image: Facebook]
> <https://www.facebook.com/marin.wageningen>
> MARIN news: Accurate calculation models for manoeuvring simulations
> <http://www.marin.nl/web/News/News-items/Accurate-calculation-models-for-manoeuvring-simulations-1.htm>
>
> *From:* ParaView [mailto:paraview-bounces at paraview.org] *On Behalf Of *Deij-van
> Rijswijk, Menno
> *Sent:* Monday, February 22, 2016 3:54 PM
> *To:* paraview at paraview.org
> *Subject:* [Paraview] When building from source with CGNS, include paths
> are not wrapped; GitLab issues broken
>
>
>
> As per title, when I build from source I configure CMake to use the path
> to the include file. This path is not propagated to the
> Wrapping/ClientServer directory, where the build fails complaining about
> the fact that it can?t find the included header cgnslib.h
>
>
>
> I don?t know how to fix this, so I?m hoping anyone who is more at home in
> the source and CMake can do this.
>
>
>
> Also, I tried to add a new issue for this on the gitlab page, but that is
> broken: 404 for the page
> https://gitlab.kitware.com/paraview/paraview/issues/new and
> https://gitlab.kitware.com/paraview/issues/new (I?m not sure if the
> double paraview/paraview is needed but both don?t work)
>
>
>
> It would be nice if I could put an issue directly to GitLab.
>
>
>
> Best wishes,
>
>
>
>
>
> Menno Deij ? van Rijswijk
>
>
>
>
>
>
>
>
> *dr. ir. Menno A. Deij-van Rijswijk | Researcher / Software Engineer |
> Maritime Simulation & Software Group*
> *MARIN* | T +31 317 49 35 06 | M.Deij at marin.nl | www.marin.nl
>
> [image: LinkedIn] <https://www.linkedin.com/company/marin> [image:
> YouTube] <http://www.youtube.com/marinmultimedia> [image: Twitter]
> <https://twitter.com/MARIN_nieuws> [image: Facebook]
> <https://www.facebook.com/marin.wageningen>
> MARIN news: Specialist course for EEDI Verifiers, June 20-24
> <http://www.marin.nl/web/News/News-items/Specialist-course-for-EEDI-Verifiers-June-2024.htm>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>


-- 
Cory Quammen
R&D Engineer
Kitware, Inc.
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From cory.quammen at kitware.com  Tue Feb 23 09:15:55 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Tue, 23 Feb 2016 09:15:55 -0500
Subject: [Paraview] CellDataToPointData much slower in 5.0?
In-Reply-To: <CA+U776BXLbzgeybPwu+VhP5bvbZwskVTjYGfejBb3wFHg79_ZQ@mail.gmail.com>
References: <CA+U776BXLbzgeybPwu+VhP5bvbZwskVTjYGfejBb3wFHg79_ZQ@mail.gmail.com>
Message-ID: <CAB5Fpx7GhuV7+2+99jC7dK4Ayb9afw9RYsSfQhNpPWsdwaVtSg@mail.gmail.com>

Ruggiero,

Are you using the ParaView 5.0 MacOS binary from the ParaView
downloads page, or are you building it yourself? If the latter, make
sure to build in Release mode.

Thanks,
Cory

On Tue, Feb 23, 2016 at 9:14 AM, Ruggiero Guida
<ruggiero.guida at gmail.com> wrote:
> Hi,
>
> I am testing Paraview 5.0 on MacOS X Yosemite and I have noticed that the
> CellDataToPointData filter has become very, very slow.
>
> I am visualizing a timeseries and each timestep may take up to 2 seconds to
> be visualized.
>
> In order to verify I have reinstalled 4.4 and everything is smooth as
> always.
>
> Any suggestion on why this is happening? Is there any default parameter that
> I should set?
>
> Thanks
> Ruggiero
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.

From ruggiero.guida at gmail.com  Tue Feb 23 09:16:54 2016
From: ruggiero.guida at gmail.com (Ruggiero Guida)
Date: Tue, 23 Feb 2016 14:16:54 +0000
Subject: [Paraview] CellDataToPointData much slower in 5.0?
In-Reply-To: <CAB5Fpx7GhuV7+2+99jC7dK4Ayb9afw9RYsSfQhNpPWsdwaVtSg@mail.gmail.com>
References: <CA+U776BXLbzgeybPwu+VhP5bvbZwskVTjYGfejBb3wFHg79_ZQ@mail.gmail.com>
 <CAB5Fpx7GhuV7+2+99jC7dK4Ayb9afw9RYsSfQhNpPWsdwaVtSg@mail.gmail.com>
Message-ID: <CA+U776Cp7nLsRWjRGu39cpT9kCWg6iCAh4BO5mU6PHdtV5qGkQ@mail.gmail.com>

Hi Cory,

I am using the binary version:

ParaView-5.0.0-Qt4-OpenGL2-MPI-OSX10.7-64bit.dmg

Thanks
Ruggiero

On Tue, 23 Feb 2016 at 14:15 Cory Quammen <cory.quammen at kitware.com> wrote:

> Ruggiero,
>
> Are you using the ParaView 5.0 MacOS binary from the ParaView
> downloads page, or are you building it yourself? If the latter, make
> sure to build in Release mode.
>
> Thanks,
> Cory
>
> On Tue, Feb 23, 2016 at 9:14 AM, Ruggiero Guida
> <ruggiero.guida at gmail.com> wrote:
> > Hi,
> >
> > I am testing Paraview 5.0 on MacOS X Yosemite and I have noticed that the
> > CellDataToPointData filter has become very, very slow.
> >
> > I am visualizing a timeseries and each timestep may take up to 2 seconds
> to
> > be visualized.
> >
> > In order to verify I have reinstalled 4.4 and everything is smooth as
> > always.
> >
> > Any suggestion on why this is happening? Is there any default parameter
> that
> > I should set?
> >
> > Thanks
> > Ruggiero
> >
> > _______________________________________________
> > Powered by www.kitware.com
> >
> > Visit other Kitware open-source projects at
> > http://www.kitware.com/opensource/opensource.html
> >
> > Please keep messages on-topic and check the ParaView Wiki at:
> > http://paraview.org/Wiki/ParaView
> >
> > Search the list archives at: http://markmail.org/search/?q=ParaView
> >
> > Follow this link to subscribe/unsubscribe:
> > http://public.kitware.com/mailman/listinfo/paraview
> >
>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
>
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From cory.quammen at kitware.com  Tue Feb 23 09:21:35 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Tue, 23 Feb 2016 09:21:35 -0500
Subject: [Paraview] question-filter
In-Reply-To: <1184664619.12802095.1456164874023.JavaMail.yahoo@mail.yahoo.com>
References: <CAB5Fpx5oqZddks3too4E7ESzAaW=jySXcQwLsEBaztAw0=5eEA@mail.gmail.com>
 <97478887.12734579.1456159550431.JavaMail.yahoo@mail.yahoo.com>
 <1184664619.12802095.1456164874023.JavaMail.yahoo@mail.yahoo.com>
Message-ID: <CAB5Fpx6=ioEKQd=j10HBFmMzjmSBUJFyhxK1U1Sd7uHRA=0-wQ@mail.gmail.com>

Hi Islem,

Please reply-all to keep the discussion on the list so that others may
benefit from the discussion.

First, is there a data array that describes whether a volume element
in your mesh contains water or some other element? If so, you can use
the Threshold filter under the Filters -> Alphabetical -> Threshold
menu to select only the elements representing water. You will have to
set the minimum and maximum to the value that represents water, then
click Apply.

HTH,
Cory

On Mon, Feb 22, 2016 at 1:14 PM, Megdich Islem <megdich_islem at yahoo.fr> wrote:
> Hi again,
>
> Thank you for your suggestion, Could you please explain how to do the first
> step because I am not the one who created the picture I sent you before.
>
> Regards,
> Islem
>
>
> Le Lundi 22 f?vrier 2016 16h45, Megdich Islem <megdich_islem at yahoo.fr> a
> ?crit :
>
>
> Thank you for your reply. I will try your suggestions.
>
> Regards,
> Islem
>
>
> Le Lundi 22 f?vrier 2016 14h22, Cory Quammen <cory.quammen at kitware.com> a
> ?crit :
>
>
> Islem,
>
> There are likely two steps:
>
> 1). Threshold your volume to identify only the water-containing cells.
> It looks like you have a way to do this already?
>
> 2). Compute the volumes of the water-containing cells and summing them up.
>
> You can use the Threshold filter to do number 1 if you have a material
> code in the cell data. To compute the volume of the cells, add a
> Python Annotation filter to the Threshold filter. Set the Expression
> to
>
> algs.sum(algs.volume(inputs[0]))
>
> This uses the numpy-like interface in the Python layer to compute the
> volumes of the cells and sum them all up. The Python Annotation filter
> should display the volume with a text label in your renderer.
>
> Hope this helps,
> Cory
>
> On Mon, Feb 22, 2016 at 9:09 AM, Megdich Islem <megdich_islem at yahoo.fr>
> wrote:
>> Hi Cory,
>>
>> Thank you very much for your prompt reply. I've attached here a picture
>> that
>> illustrates my problem. I am working on the break of bund walls and I want
>> to compute the volume of water that overtops the bund wall (walls
>> surrounding storage tank), after the  solution reaches the steady state.
>>
>> Regards,
>> Islem
>>
>>
>> Le Lundi 22 f?vrier 2016 13h53, Cory Quammen <cory.quammen at kitware.com> a
>> ?crit :
>>
>>
>> Hi Islem,
>>
>> This is the place to ask ParaView questions! There is some activity on
>> StackOverflow, but most people ask questions on this mailing list.
>>
>> Could you clarify what you want to compute? Do you just want to subset
>> a volume mesh and display the results over time? Do you want to
>> compute one quantity and display it as a graph over time? Do you want
>> to compute a single number from a time series data set?
>>
>> Thanks,
>> Cory
>>
>> On Mon, Feb 22, 2016 at 8:48 AM, Megdich Islem <megdich_islem at yahoo.fr>
>> wrote:
>>> Hello,
>>>
>>> I am new to paraview, and I didn't find a forum under paraview website to
>>> ask my question.
>>> My question is is there any filter in paraview that lets to compute the
>>> evolution of a quantity within a specific volume of the mesh.
>>>
>>> Regards,
>>> Islem
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>>
>>
>>
>>
>> --
>> Cory Quammen
>> R&D Engineer
>> Kitware, Inc.
>
>>
>>
>>
>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
>
>
>
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.

From cory.quammen at kitware.com  Tue Feb 23 09:57:31 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Tue, 23 Feb 2016 09:57:31 -0500
Subject: [Paraview] How to determine that some points are inside some
 closed surfaces or not ?
In-Reply-To: <CAFJvLTaVeU7D38uU4o6mUSEJe8Q5XFCD7VC5NsvOyDO2z4+uGw@mail.gmail.com>
References: <CAFJvLTaVeU7D38uU4o6mUSEJe8Q5XFCD7VC5NsvOyDO2z4+uGw@mail.gmail.com>
Message-ID: <CAB5Fpx5iyzBWEvLcaw+Z+EnbUPvT51msVWo6tOXiL_EMbLg9RQ@mail.gmail.com>

Hi,

Please load the attached state file that shows how to find the points
inside an object. In this case, I use a Point Source to generate the
points and a Sphere Source to generate the object. The Programmable
Filter shows how to find the signed distance of points to the nearest
surface, then threshold those points to select all whose signed
distance is less than 0.

HTH,
Cory

On Tue, Feb 23, 2016 at 6:15 AM, hengxing pan <pmopanhx at gmail.com> wrote:
> Hi,all
>
> I wrote the lines.vtk in binary format and the points.vtk in ASCII format
> according to www.vtk.org/VTK/img/file-formats.pdf.
> The attached pictures show the process how I get the tubes(closed surfaces
> which I thought the tubes are) ,then I want to find out the points which are
> inside the tubes (blue area in the view3), but I don't know how to work it
> out.
> Now I'm desperate for achieving my aim, so please help me if you know how to
> do it !
> Thank you in advance !
> pan hengxing
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.
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From joachim.pouderoux at kitware.com  Tue Feb 23 10:08:56 2016
From: joachim.pouderoux at kitware.com (Joachim Pouderoux)
Date: Tue, 23 Feb 2016 16:08:56 +0100
Subject: [Paraview] CellDataToPointData much slower in 5.0?
In-Reply-To: <CA+U776Cp7nLsRWjRGu39cpT9kCWg6iCAh4BO5mU6PHdtV5qGkQ@mail.gmail.com>
References: <CA+U776BXLbzgeybPwu+VhP5bvbZwskVTjYGfejBb3wFHg79_ZQ@mail.gmail.com>
 <CAB5Fpx7GhuV7+2+99jC7dK4Ayb9afw9RYsSfQhNpPWsdwaVtSg@mail.gmail.com>
 <CA+U776Cp7nLsRWjRGu39cpT9kCWg6iCAh4BO5mU6PHdtV5qGkQ@mail.gmail.com>
Message-ID: <CACJ=gTgY1+ZcfHcheJmKMkayzKp4UwTnNapXaHvN1nwyTVjkKw@mail.gmail.com>

Ruggiero,

Could you give us the whole pipeline involved here?
As you are processing temporal data, CellDataToPointData might not be the
problem here: the reader might be the cause.

Joachim

*Joachim Pouderoux*

*PhD, Technical Expert*
*Kitware SAS <http://www.kitware.fr>*


2016-02-23 15:16 GMT+01:00 Ruggiero Guida <ruggiero.guida at gmail.com>:

> Hi Cory,
>
> I am using the binary version:
>
> ParaView-5.0.0-Qt4-OpenGL2-MPI-OSX10.7-64bit.dmg
>
> Thanks
> Ruggiero
>
> On Tue, 23 Feb 2016 at 14:15 Cory Quammen <cory.quammen at kitware.com>
> wrote:
>
>> Ruggiero,
>>
>> Are you using the ParaView 5.0 MacOS binary from the ParaView
>> downloads page, or are you building it yourself? If the latter, make
>> sure to build in Release mode.
>>
>> Thanks,
>> Cory
>>
>> On Tue, Feb 23, 2016 at 9:14 AM, Ruggiero Guida
>> <ruggiero.guida at gmail.com> wrote:
>> > Hi,
>> >
>> > I am testing Paraview 5.0 on MacOS X Yosemite and I have noticed that
>> the
>> > CellDataToPointData filter has become very, very slow.
>> >
>> > I am visualizing a timeseries and each timestep may take up to 2
>> seconds to
>> > be visualized.
>> >
>> > In order to verify I have reinstalled 4.4 and everything is smooth as
>> > always.
>> >
>> > Any suggestion on why this is happening? Is there any default parameter
>> that
>> > I should set?
>> >
>> > Thanks
>> > Ruggiero
>> >
>> > _______________________________________________
>> > Powered by www.kitware.com
>> >
>> > Visit other Kitware open-source projects at
>> > http://www.kitware.com/opensource/opensource.html
>> >
>> > Please keep messages on-topic and check the ParaView Wiki at:
>> > http://paraview.org/Wiki/ParaView
>> >
>> > Search the list archives at: http://markmail.org/search/?q=ParaView
>> >
>> > Follow this link to subscribe/unsubscribe:
>> > http://public.kitware.com/mailman/listinfo/paraview
>> >
>>
>>
>>
>> --
>> Cory Quammen
>> R&D Engineer
>> Kitware, Inc.
>>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From andy.bauer at kitware.com  Tue Feb 23 10:12:17 2016
From: andy.bauer at kitware.com (Andy Bauer)
Date: Tue, 23 Feb 2016 10:12:17 -0500
Subject: [Paraview] ParticleTracer filter makes Paraview crash on 'play'
In-Reply-To: <AM4PR03MB14574ECE8D9B698131A40062A4A40@AM4PR03MB1457.eurprd03.prod.outlook.com>
References: <AM4PR03MB145721873585FC9CF810F620A4070@AM4PR03MB1457.eurprd03.prod.outlook.com>
 <CAMaOp+EEAptGp+4KGB2okiHUycrHCGCGi+_vy4HKzYALvVdazg@mail.gmail.com>
 <AM4PR03MB14574ECE8D9B698131A40062A4A40@AM4PR03MB1457.eurprd03.prod.outlook.com>
Message-ID: <CAMaOp+HMya7Mircf+724maE5xV+cMv+DWU=MSHB-bgrMofjYvA@mail.gmail.com>

Hi Per,

Can you share either a Python script or state file which reproduces the
problem for PV 5.0? I still have your OpenFOAM file to test with so I don't
need that.

Thanks,
Andy

On Tue, Feb 23, 2016 at 2:10 AM, Per Adamsen <padamsen at grundfos.com> wrote:

> Hi Andy,
>
>
>
> I just want to refresh this conversation ? sorry for not passing all
> messages through this mailing list? my mistake.
>
>
>
> After I shared the case you wrote that you had tried a few things but with
> no luck in PV 5.0. As mentioned below I have tried the following 64-bit
> versions
>
> - 3.98.1 on Win7
>
> - 4.4.0 on Win7
>
> - 4.2.0 on Linux HPC cluster
>
> Regards,
>
> Per
>
>
>
>
>
> *From:* Andy Bauer [mailto:andy.bauer at kitware.com]
> *Sent:* 23. november 2015 16:18
> *To:* Per Adamsen <padamsen at grundfos.com>
> *Cc:* paraview at paraview.org
> *Subject:* Re: [Paraview] ParticleTracer filter makes Paraview crash on
> 'play'
>
>
>
> Hi,
>
>
>
> My guess is that it has to do with OpenFOAM's way of saving out extra
> fields for the initial time step. Several temporal filters assume that the
> arrays are ordered the same for different time steps but the OpenFOAM
> reader doesn't follow this convention.
>
> Can you share a data set that reproduces the issue?
>
> Andy
>
>
>
> On Mon, Nov 23, 2015 at 8:23 AM, Per Adamsen <padamsen at grundfos.com>
> wrote:
>
> Hi,
>
>
>
> I have been trying to visualize flow using the particle tracers as
> described at
> http://openfoamwiki.net/index.php/HowTo_use_particle_tracer_in_paraFoam.
>
>
>
> It works when using it on the cavity tutorial but when I try to transfer
> the setup to one of my own 3D OpenFOAM cases of a pump volute with e.g. 20
> timesteps and 900,000 cells Paraview crashes with a segmentation fault when
> I hit the ?Play? button to step through the individual timesteps.
>
>
>
> The pipeline setup is exactly as described in the HowTo (linked above) and
> I have tried both with and without the Temporal Interpolator and on Linux
> and Windows platform ? all with the same crash result.
>
>
>
> I have tried the following 64-bit version:
>
> 3.98.1 on Win7
>
> 4.4.0 on Win7
>
> 4.2.0 on Linux HPC cluster
>
>
>
> At first I thought the reason for the crash was due to the use of
> interfaces in the model but I have tried a model without interfaces at all
> and the result is the same.
>
>
>
> Are there any restriction to the data which can be used?
>
>
>
> The following is the trace right up to pressing ?Play?:
>
> #### import the simple module from the paraview
>
> from paraview.simple import *
>
> #### disable automatic camera reset on 'Show'
>
> paraview.simple._DisableFirstRenderCameraReset()
>
>
>
> # get active source.
>
> q97_volutefoam = GetActiveSource()
>
>
>
> # Properties modified on q97_volutefoam
>
> q97_volutefoam.CaseType = 'Decomposed Case'
>
>
>
> # get active view
>
> renderView1 = GetActiveViewOrCreate('RenderView')
>
> # uncomment following to set a specific view size
>
> # renderView1.ViewSize = [1025, 773]
>
>
>
> # get color transfer function/color map for 'p'
>
> pLUT = GetColorTransferFunction('p')
>
>
>
> # show data in view
>
> q97_volutefoamDisplay = Show(q97_volutefoam, renderView1)
>
> # trace defaults for the display properties.
>
> q97_volutefoamDisplay.ColorArrayName = ['POINTS', 'p']
>
> q97_volutefoamDisplay.LookupTable = pLUT
>
> q97_volutefoamDisplay.ScalarOpacityUnitDistance = 0.01089979797382614
>
> q97_volutefoamDisplay.SelectInputVectors = ['POINTS', 'U']
>
> q97_volutefoamDisplay.WriteLog = ''
>
>
>
> # reset view to fit data
>
> renderView1.ResetCamera()
>
>
>
> # show color bar/color legend
>
> q97_volutefoamDisplay.SetScalarBarVisibility(renderView1, True)
>
>
>
> # get animation scene
>
> animationScene1 = GetAnimationScene()
>
>
>
> # update animation scene based on data timesteps
>
> animationScene1.UpdateAnimationUsingDataTimeSteps()
>
>
>
> # get opacity transfer function/opacity map for 'p'
>
> pPWF = GetOpacityTransferFunction('p')
>
>
>
> # create a new 'Plane'
>
> plane1 = Plane()
>
>
>
> # Properties modified on q97_volutefoam
>
> q97_volutefoam.CellArrays = ['U', 'k', 'nut', 'omega', 'p', 'gradP',
> 'myPtot', 'myYPlus', 'uPlus', 'y', 'yPlus']
>
>
>
> # Properties modified on plane1
>
> plane1.XResolution = 100
>
> plane1.YResolution = 100
>
>
>
> # show data in view
>
> plane1Display = Show(plane1, renderView1)
>
> # trace defaults for the display properties.
>
> plane1Display.ColorArrayName = [None, '']
>
> plane1Display.SelectInputVectors = ['POINTS', 'Normals']
>
> plane1Display.WriteLog = ''
>
>
>
> # create a new 'ParticleTracer'
>
> particleTracer1 = ParticleTracer(Input=q97_volutefoam,
>
>     SeedSource=plane1)
>
> particleTracer1.SelectInputVectors = ['POINTS', 'U']
>
>
>
> # Properties modified on particleTracer1
>
> particleTracer1.StaticSeeds = 1
>
> particleTracer1.StaticMesh = 1
>
>
>
> # show data in view
>
> particleTracer1Display = Show(particleTracer1, renderView1)
>
> # trace defaults for the display properties.
>
> particleTracer1Display.ColorArrayName = ['POINTS', 'p']
>
> particleTracer1Display.LookupTable = pLUT
>
> particleTracer1Display.SelectInputVectors = ['POINTS', 'U']
>
> particleTracer1Display.WriteLog = ''
>
>
>
> # hide data in view
>
> Hide(q97_volutefoam, renderView1)
>
>
>
> # hide data in view
>
> Hide(plane1, renderView1)
>
>
>
> # show color bar/color legend
>
> particleTracer1Display.SetScalarBarVisibility(renderView1, True)
>
>
>
> Regards,
>
> Per Adamsen
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
>
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From ruggiero.guida at gmail.com  Tue Feb 23 10:25:28 2016
From: ruggiero.guida at gmail.com (Ruggiero Guida)
Date: Tue, 23 Feb 2016 15:25:28 +0000
Subject: [Paraview] CellDataToPointData much slower in 5.0?
In-Reply-To: <CA+U776Az+fovS1TGb2pg7X2y932dMNj8gNUuv0RaZovrbZHDEA@mail.gmail.com>
References: <CA+U776BXLbzgeybPwu+VhP5bvbZwskVTjYGfejBb3wFHg79_ZQ@mail.gmail.com>
 <CAB5Fpx7GhuV7+2+99jC7dK4Ayb9afw9RYsSfQhNpPWsdwaVtSg@mail.gmail.com>
 <CA+U776Cp7nLsRWjRGu39cpT9kCWg6iCAh4BO5mU6PHdtV5qGkQ@mail.gmail.com>
 <CACJ=gTgY1+ZcfHcheJmKMkayzKp4UwTnNapXaHvN1nwyTVjkKw@mail.gmail.com>
 <CA+U776Az+fovS1TGb2pg7X2y932dMNj8gNUuv0RaZovrbZHDEA@mail.gmail.com>
Message-ID: <CA+U776C56+zfrbtOZZaUmNFxFu1=6X2NKy1fOHJroxTD8S_h+Q@mail.gmail.com>

The pipeline has been generated with 4.4 though.

On Tue, 23 Feb 2016 at 15:24 Ruggiero Guida <ruggiero.guida at gmail.com>
wrote:

> Hi Joachim,
>
> You can download the first 10 files of the series here
> <https://dl.dropboxusercontent.com/u/1342856/Archive.zip>.  I am also
> attaching the state file
>
> The pipeline is quite simple:
> - Open files
> - Apply filter
>
> Thanks
> Ruggiero
>
> On Tue, 23 Feb 2016 at 15:09 Joachim Pouderoux <
> joachim.pouderoux at kitware.com> wrote:
>
>> Ruggiero,
>>
>> Could you give us the whole pipeline involved here?
>> As you are processing temporal data, CellDataToPointData might not be the
>> problem here: the reader might be the cause.
>>
>> Joachim
>>
>> *Joachim Pouderoux*
>>
>> *PhD, Technical Expert*
>> *Kitware SAS <http://www.kitware.fr>*
>>
>>
>> 2016-02-23 15:16 GMT+01:00 Ruggiero Guida <ruggiero.guida at gmail.com>:
>>
>>> Hi Cory,
>>>
>>> I am using the binary version:
>>>
>>> ParaView-5.0.0-Qt4-OpenGL2-MPI-OSX10.7-64bit.dmg
>>>
>>> Thanks
>>> Ruggiero
>>>
>>> On Tue, 23 Feb 2016 at 14:15 Cory Quammen <cory.quammen at kitware.com>
>>> wrote:
>>>
>>>> Ruggiero,
>>>>
>>>> Are you using the ParaView 5.0 MacOS binary from the ParaView
>>>> downloads page, or are you building it yourself? If the latter, make
>>>> sure to build in Release mode.
>>>>
>>>> Thanks,
>>>> Cory
>>>>
>>>> On Tue, Feb 23, 2016 at 9:14 AM, Ruggiero Guida
>>>> <ruggiero.guida at gmail.com> wrote:
>>>> > Hi,
>>>> >
>>>> > I am testing Paraview 5.0 on MacOS X Yosemite and I have noticed that
>>>> the
>>>> > CellDataToPointData filter has become very, very slow.
>>>> >
>>>> > I am visualizing a timeseries and each timestep may take up to 2
>>>> seconds to
>>>> > be visualized.
>>>> >
>>>> > In order to verify I have reinstalled 4.4 and everything is smooth as
>>>> > always.
>>>> >
>>>> > Any suggestion on why this is happening? Is there any default
>>>> parameter that
>>>> > I should set?
>>>> >
>>>> > Thanks
>>>> > Ruggiero
>>>> >
>>>> > _______________________________________________
>>>> > Powered by www.kitware.com
>>>> >
>>>> > Visit other Kitware open-source projects at
>>>> > http://www.kitware.com/opensource/opensource.html
>>>> >
>>>> > Please keep messages on-topic and check the ParaView Wiki at:
>>>> > http://paraview.org/Wiki/ParaView
>>>> >
>>>> > Search the list archives at: http://markmail.org/search/?q=ParaView
>>>> >
>>>> > Follow this link to subscribe/unsubscribe:
>>>> > http://public.kitware.com/mailman/listinfo/paraview
>>>> >
>>>>
>>>>
>>>>
>>>> --
>>>> Cory Quammen
>>>> R&D Engineer
>>>> Kitware, Inc.
>>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>>
>>
-------------- next part --------------
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From joachim.pouderoux at kitware.com  Tue Feb 23 10:46:33 2016
From: joachim.pouderoux at kitware.com (Joachim Pouderoux)
Date: Tue, 23 Feb 2016 16:46:33 +0100
Subject: [Paraview] CellDataToPointData much slower in 5.0?
In-Reply-To: <CA+U776C56+zfrbtOZZaUmNFxFu1=6X2NKy1fOHJroxTD8S_h+Q@mail.gmail.com>
References: <CA+U776BXLbzgeybPwu+VhP5bvbZwskVTjYGfejBb3wFHg79_ZQ@mail.gmail.com>
 <CAB5Fpx7GhuV7+2+99jC7dK4Ayb9afw9RYsSfQhNpPWsdwaVtSg@mail.gmail.com>
 <CA+U776Cp7nLsRWjRGu39cpT9kCWg6iCAh4BO5mU6PHdtV5qGkQ@mail.gmail.com>
 <CACJ=gTgY1+ZcfHcheJmKMkayzKp4UwTnNapXaHvN1nwyTVjkKw@mail.gmail.com>
 <CA+U776Az+fovS1TGb2pg7X2y932dMNj8gNUuv0RaZovrbZHDEA@mail.gmail.com>
 <CA+U776C56+zfrbtOZZaUmNFxFu1=6X2NKy1fOHJroxTD8S_h+Q@mail.gmail.com>
Message-ID: <CACJ=gTgmoFfMfpa_ULeHBy2Bqq8k5wPHO5zG-ERv81S==9jwUw@mail.gmail.com>

Wow, this is indeed very slow.
Looking at the Timer Log it seems to me like what is slow is the rendering.
Indeed: add an Outline filter after the CellDataToPointData and hide the
CellDataToPointData source. It's fast as it should. You can also try with a
ProgrammableFilter, same result.

It looks like what is slow is coloring by a PointData array (choose a
celldata array and is fast)...

@Ken: any idea why this happens? is it something that has been fixed
recently?

Joachim


*Joachim Pouderoux*

*PhD, Technical Expert*
*Kitware SAS <http://www.kitware.fr>*


2016-02-23 16:25 GMT+01:00 Ruggiero Guida <ruggiero.guida at gmail.com>:

> The pipeline has been generated with 4.4 though.
>
> On Tue, 23 Feb 2016 at 15:24 Ruggiero Guida <ruggiero.guida at gmail.com>
> wrote:
>
>> Hi Joachim,
>>
>> You can download the first 10 files of the series here
>> <https://dl.dropboxusercontent.com/u/1342856/Archive.zip>.  I am also
>> attaching the state file
>>
>> The pipeline is quite simple:
>> - Open files
>> - Apply filter
>>
>> Thanks
>> Ruggiero
>>
>> On Tue, 23 Feb 2016 at 15:09 Joachim Pouderoux <
>> joachim.pouderoux at kitware.com> wrote:
>>
>>> Ruggiero,
>>>
>>> Could you give us the whole pipeline involved here?
>>> As you are processing temporal data, CellDataToPointData might not be
>>> the problem here: the reader might be the cause.
>>>
>>> Joachim
>>>
>>> *Joachim Pouderoux*
>>>
>>> *PhD, Technical Expert*
>>> *Kitware SAS <http://www.kitware.fr>*
>>>
>>>
>>> 2016-02-23 15:16 GMT+01:00 Ruggiero Guida <ruggiero.guida at gmail.com>:
>>>
>>>> Hi Cory,
>>>>
>>>> I am using the binary version:
>>>>
>>>> ParaView-5.0.0-Qt4-OpenGL2-MPI-OSX10.7-64bit.dmg
>>>>
>>>> Thanks
>>>> Ruggiero
>>>>
>>>> On Tue, 23 Feb 2016 at 14:15 Cory Quammen <cory.quammen at kitware.com>
>>>> wrote:
>>>>
>>>>> Ruggiero,
>>>>>
>>>>> Are you using the ParaView 5.0 MacOS binary from the ParaView
>>>>> downloads page, or are you building it yourself? If the latter, make
>>>>> sure to build in Release mode.
>>>>>
>>>>> Thanks,
>>>>> Cory
>>>>>
>>>>> On Tue, Feb 23, 2016 at 9:14 AM, Ruggiero Guida
>>>>> <ruggiero.guida at gmail.com> wrote:
>>>>> > Hi,
>>>>> >
>>>>> > I am testing Paraview 5.0 on MacOS X Yosemite and I have noticed
>>>>> that the
>>>>> > CellDataToPointData filter has become very, very slow.
>>>>> >
>>>>> > I am visualizing a timeseries and each timestep may take up to 2
>>>>> seconds to
>>>>> > be visualized.
>>>>> >
>>>>> > In order to verify I have reinstalled 4.4 and everything is smooth as
>>>>> > always.
>>>>> >
>>>>> > Any suggestion on why this is happening? Is there any default
>>>>> parameter that
>>>>> > I should set?
>>>>> >
>>>>> > Thanks
>>>>> > Ruggiero
>>>>> >
>>>>> > _______________________________________________
>>>>> > Powered by www.kitware.com
>>>>> >
>>>>> > Visit other Kitware open-source projects at
>>>>> > http://www.kitware.com/opensource/opensource.html
>>>>> >
>>>>> > Please keep messages on-topic and check the ParaView Wiki at:
>>>>> > http://paraview.org/Wiki/ParaView
>>>>> >
>>>>> > Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>> >
>>>>> > Follow this link to subscribe/unsubscribe:
>>>>> > http://public.kitware.com/mailman/listinfo/paraview
>>>>> >
>>>>>
>>>>>
>>>>>
>>>>> --
>>>>> Cory Quammen
>>>>> R&D Engineer
>>>>> Kitware, Inc.
>>>>>
>>>>
>>>> _______________________________________________
>>>> Powered by www.kitware.com
>>>>
>>>> Visit other Kitware open-source projects at
>>>> http://www.kitware.com/opensource/opensource.html
>>>>
>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>> http://paraview.org/Wiki/ParaView
>>>>
>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>
>>>>
>>>
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From joachim.pouderoux at kitware.com  Tue Feb 23 10:59:36 2016
From: joachim.pouderoux at kitware.com (Joachim Pouderoux)
Date: Tue, 23 Feb 2016 16:59:36 +0100
Subject: [Paraview] CellDataToPointData much slower in 5.0?
In-Reply-To: <CACJ=gTgmoFfMfpa_ULeHBy2Bqq8k5wPHO5zG-ERv81S==9jwUw@mail.gmail.com>
References: <CA+U776BXLbzgeybPwu+VhP5bvbZwskVTjYGfejBb3wFHg79_ZQ@mail.gmail.com>
 <CAB5Fpx7GhuV7+2+99jC7dK4Ayb9afw9RYsSfQhNpPWsdwaVtSg@mail.gmail.com>
 <CA+U776Cp7nLsRWjRGu39cpT9kCWg6iCAh4BO5mU6PHdtV5qGkQ@mail.gmail.com>
 <CACJ=gTgY1+ZcfHcheJmKMkayzKp4UwTnNapXaHvN1nwyTVjkKw@mail.gmail.com>
 <CA+U776Az+fovS1TGb2pg7X2y932dMNj8gNUuv0RaZovrbZHDEA@mail.gmail.com>
 <CA+U776C56+zfrbtOZZaUmNFxFu1=6X2NKy1fOHJroxTD8S_h+Q@mail.gmail.com>
 <CACJ=gTgmoFfMfpa_ULeHBy2Bqq8k5wPHO5zG-ERv81S==9jwUw@mail.gmail.com>
Message-ID: <CACJ=gTgJQxdf4x+WAN03YE_m44+rK2_cWoN3HJc4619V_d0+mQ@mail.gmail.com>

Even more strange: it is slow only with one of the point data array
(scalar), with the other it is OK.

*Joachim Pouderoux*

*PhD, Technical Expert*
*Kitware SAS <http://www.kitware.fr>*


2016-02-23 16:46 GMT+01:00 Joachim Pouderoux <joachim.pouderoux at kitware.com>
:

> Wow, this is indeed very slow.
> Looking at the Timer Log it seems to me like what is slow is the rendering.
> Indeed: add an Outline filter after the CellDataToPointData and hide the
> CellDataToPointData source. It's fast as it should. You can also try with a
> ProgrammableFilter, same result.
>
> It looks like what is slow is coloring by a PointData array (choose a
> celldata array and is fast)...
>
> @Ken: any idea why this happens? is it something that has been fixed
> recently?
>
> Joachim
>
>
> *Joachim Pouderoux*
>
> *PhD, Technical Expert*
> *Kitware SAS <http://www.kitware.fr>*
>
>
> 2016-02-23 16:25 GMT+01:00 Ruggiero Guida <ruggiero.guida at gmail.com>:
>
>> The pipeline has been generated with 4.4 though.
>>
>> On Tue, 23 Feb 2016 at 15:24 Ruggiero Guida <ruggiero.guida at gmail.com>
>> wrote:
>>
>>> Hi Joachim,
>>>
>>> You can download the first 10 files of the series here
>>> <https://dl.dropboxusercontent.com/u/1342856/Archive.zip>.  I am also
>>> attaching the state file
>>>
>>> The pipeline is quite simple:
>>> - Open files
>>> - Apply filter
>>>
>>> Thanks
>>> Ruggiero
>>>
>>> On Tue, 23 Feb 2016 at 15:09 Joachim Pouderoux <
>>> joachim.pouderoux at kitware.com> wrote:
>>>
>>>> Ruggiero,
>>>>
>>>> Could you give us the whole pipeline involved here?
>>>> As you are processing temporal data, CellDataToPointData might not be
>>>> the problem here: the reader might be the cause.
>>>>
>>>> Joachim
>>>>
>>>> *Joachim Pouderoux*
>>>>
>>>> *PhD, Technical Expert*
>>>> *Kitware SAS <http://www.kitware.fr>*
>>>>
>>>>
>>>> 2016-02-23 15:16 GMT+01:00 Ruggiero Guida <ruggiero.guida at gmail.com>:
>>>>
>>>>> Hi Cory,
>>>>>
>>>>> I am using the binary version:
>>>>>
>>>>> ParaView-5.0.0-Qt4-OpenGL2-MPI-OSX10.7-64bit.dmg
>>>>>
>>>>> Thanks
>>>>> Ruggiero
>>>>>
>>>>> On Tue, 23 Feb 2016 at 14:15 Cory Quammen <cory.quammen at kitware.com>
>>>>> wrote:
>>>>>
>>>>>> Ruggiero,
>>>>>>
>>>>>> Are you using the ParaView 5.0 MacOS binary from the ParaView
>>>>>> downloads page, or are you building it yourself? If the latter, make
>>>>>> sure to build in Release mode.
>>>>>>
>>>>>> Thanks,
>>>>>> Cory
>>>>>>
>>>>>> On Tue, Feb 23, 2016 at 9:14 AM, Ruggiero Guida
>>>>>> <ruggiero.guida at gmail.com> wrote:
>>>>>> > Hi,
>>>>>> >
>>>>>> > I am testing Paraview 5.0 on MacOS X Yosemite and I have noticed
>>>>>> that the
>>>>>> > CellDataToPointData filter has become very, very slow.
>>>>>> >
>>>>>> > I am visualizing a timeseries and each timestep may take up to 2
>>>>>> seconds to
>>>>>> > be visualized.
>>>>>> >
>>>>>> > In order to verify I have reinstalled 4.4 and everything is smooth
>>>>>> as
>>>>>> > always.
>>>>>> >
>>>>>> > Any suggestion on why this is happening? Is there any default
>>>>>> parameter that
>>>>>> > I should set?
>>>>>> >
>>>>>> > Thanks
>>>>>> > Ruggiero
>>>>>> >
>>>>>> > _______________________________________________
>>>>>> > Powered by www.kitware.com
>>>>>> >
>>>>>> > Visit other Kitware open-source projects at
>>>>>> > http://www.kitware.com/opensource/opensource.html
>>>>>> >
>>>>>> > Please keep messages on-topic and check the ParaView Wiki at:
>>>>>> > http://paraview.org/Wiki/ParaView
>>>>>> >
>>>>>> > Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>> >
>>>>>> > Follow this link to subscribe/unsubscribe:
>>>>>> > http://public.kitware.com/mailman/listinfo/paraview
>>>>>> >
>>>>>>
>>>>>>
>>>>>>
>>>>>> --
>>>>>> Cory Quammen
>>>>>> R&D Engineer
>>>>>> Kitware, Inc.
>>>>>>
>>>>>
>>>>> _______________________________________________
>>>>> Powered by www.kitware.com
>>>>>
>>>>> Visit other Kitware open-source projects at
>>>>> http://www.kitware.com/opensource/opensource.html
>>>>>
>>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>>> http://paraview.org/Wiki/ParaView
>>>>>
>>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>
>>>>> Follow this link to subscribe/unsubscribe:
>>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>>
>>>>>
>>>>
>
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From salazardetro1 at llnl.gov  Tue Feb 23 13:57:40 2016
From: salazardetro1 at llnl.gov (Salazar De Troya, Miguel)
Date: Tue, 23 Feb 2016 18:57:40 +0000
Subject: [Paraview] Number of frames depending on the Picture size
Message-ID: <D2F1EBA1.1796%salazardetro1@llnl.gov>

Hello

I am calling this function to write a movie


renderView1.ViewSize = [1984,1962]

WriteAnimation('./movie_png/optimization_movie.png',Magnification=1, FrameRate=1.0, Compression=False)

And I have noticed that the number of resulting PNG files depends on the Magnification variable and on the ViewSize. If I remove the line renderView1.ViewSize = [1984,1962] and leave Magnification as 1 I will get a greater amount of PNG files than if I increased Magnification or leave the line renderView1.ViewSize = [1984,1962] there. Why is this? It seems as I had to choose between the number of frames and the size of the movie.

Thanks
Miguel
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From ken.martin at kitware.com  Tue Feb 23 14:17:12 2016
From: ken.martin at kitware.com (Ken Martin)
Date: Tue, 23 Feb 2016 14:17:12 -0500
Subject: [Paraview] CellDataToPointData much slower in 5.0?
In-Reply-To: <CACJ=gTgmoFfMfpa_ULeHBy2Bqq8k5wPHO5zG-ERv81S==9jwUw@mail.gmail.com>
References: <CA+U776BXLbzgeybPwu+VhP5bvbZwskVTjYGfejBb3wFHg79_ZQ@mail.gmail.com>
 <CAB5Fpx7GhuV7+2+99jC7dK4Ayb9afw9RYsSfQhNpPWsdwaVtSg@mail.gmail.com>
 <CA+U776Cp7nLsRWjRGu39cpT9kCWg6iCAh4BO5mU6PHdtV5qGkQ@mail.gmail.com>
 <CACJ=gTgY1+ZcfHcheJmKMkayzKp4UwTnNapXaHvN1nwyTVjkKw@mail.gmail.com>
 <CA+U776Az+fovS1TGb2pg7X2y932dMNj8gNUuv0RaZovrbZHDEA@mail.gmail.com>
 <CA+U776C56+zfrbtOZZaUmNFxFu1=6X2NKy1fOHJroxTD8S_h+Q@mail.gmail.com>
 <CACJ=gTgmoFfMfpa_ULeHBy2Bqq8k5wPHO5zG-ERv81S==9jwUw@mail.gmail.com>
Message-ID: <CANXz0SZ1wConrJXE9Xz30yXuj_=ZUhhG5+1HTRKpVYAP=Fnt0g@mail.gmail.com>

Pulled this off list since I have some ignorant questions to ask :-)

So I loaded the data and it seems to render fine (100 fps).  I did not have
the state file so I'm not sure what pipeline etc is being used.  When I hit
the animation button it plugs along at one frame a second or so. I have no
clue if that is what is expected or not. It appears that the rendering data
is being rebuilt every frame. Again I just don't know enough about PV to
know if that is expected or not. I would think PV would cache the timesteps
if the size is modest but maybe not. I will build PV and run it in the
profiler but it may be tomorrow before the build wraps up.

If you have a modest VTK example then I could probably answer your question
easily.But PV is a much more complex beast and I do not know the internals
well enough to guess.

Thanks
Ken




On Tue, Feb 23, 2016 at 10:46 AM, Joachim Pouderoux <
joachim.pouderoux at kitware.com> wrote:

> Wow, this is indeed very slow.
> Looking at the Timer Log it seems to me like what is slow is the rendering.
> Indeed: add an Outline filter after the CellDataToPointData and hide the
> CellDataToPointData source. It's fast as it should. You can also try with a
> ProgrammableFilter, same result.
>
> It looks like what is slow is coloring by a PointData array (choose a
> celldata array and is fast)...
>
> @Ken: any idea why this happens? is it something that has been fixed
> recently?
>
> Joachim
>
>
> *Joachim Pouderoux*
>
> *PhD, Technical Expert*
> *Kitware SAS <http://www.kitware.fr>*
>
>
> 2016-02-23 16:25 GMT+01:00 Ruggiero Guida <ruggiero.guida at gmail.com>:
>
>> The pipeline has been generated with 4.4 though.
>>
>> On Tue, 23 Feb 2016 at 15:24 Ruggiero Guida <ruggiero.guida at gmail.com>
>> wrote:
>>
>>> Hi Joachim,
>>>
>>> You can download the first 10 files of the series here
>>> <https://dl.dropboxusercontent.com/u/1342856/Archive.zip>.  I am also
>>> attaching the state file
>>>
>>> The pipeline is quite simple:
>>> - Open files
>>> - Apply filter
>>>
>>> Thanks
>>> Ruggiero
>>>
>>> On Tue, 23 Feb 2016 at 15:09 Joachim Pouderoux <
>>> joachim.pouderoux at kitware.com> wrote:
>>>
>>>> Ruggiero,
>>>>
>>>> Could you give us the whole pipeline involved here?
>>>> As you are processing temporal data, CellDataToPointData might not be
>>>> the problem here: the reader might be the cause.
>>>>
>>>> Joachim
>>>>
>>>> *Joachim Pouderoux*
>>>>
>>>> *PhD, Technical Expert*
>>>> *Kitware SAS <http://www.kitware.fr>*
>>>>
>>>>
>>>> 2016-02-23 15:16 GMT+01:00 Ruggiero Guida <ruggiero.guida at gmail.com>:
>>>>
>>>>> Hi Cory,
>>>>>
>>>>> I am using the binary version:
>>>>>
>>>>> ParaView-5.0.0-Qt4-OpenGL2-MPI-OSX10.7-64bit.dmg
>>>>>
>>>>> Thanks
>>>>> Ruggiero
>>>>>
>>>>> On Tue, 23 Feb 2016 at 14:15 Cory Quammen <cory.quammen at kitware.com>
>>>>> wrote:
>>>>>
>>>>>> Ruggiero,
>>>>>>
>>>>>> Are you using the ParaView 5.0 MacOS binary from the ParaView
>>>>>> downloads page, or are you building it yourself? If the latter, make
>>>>>> sure to build in Release mode.
>>>>>>
>>>>>> Thanks,
>>>>>> Cory
>>>>>>
>>>>>> On Tue, Feb 23, 2016 at 9:14 AM, Ruggiero Guida
>>>>>> <ruggiero.guida at gmail.com> wrote:
>>>>>> > Hi,
>>>>>> >
>>>>>> > I am testing Paraview 5.0 on MacOS X Yosemite and I have noticed
>>>>>> that the
>>>>>> > CellDataToPointData filter has become very, very slow.
>>>>>> >
>>>>>> > I am visualizing a timeseries and each timestep may take up to 2
>>>>>> seconds to
>>>>>> > be visualized.
>>>>>> >
>>>>>> > In order to verify I have reinstalled 4.4 and everything is smooth
>>>>>> as
>>>>>> > always.
>>>>>> >
>>>>>> > Any suggestion on why this is happening? Is there any default
>>>>>> parameter that
>>>>>> > I should set?
>>>>>> >
>>>>>> > Thanks
>>>>>> > Ruggiero
>>>>>> >
>>>>>> > _______________________________________________
>>>>>> > Powered by www.kitware.com
>>>>>> >
>>>>>> > Visit other Kitware open-source projects at
>>>>>> > http://www.kitware.com/opensource/opensource.html
>>>>>> >
>>>>>> > Please keep messages on-topic and check the ParaView Wiki at:
>>>>>> > http://paraview.org/Wiki/ParaView
>>>>>> >
>>>>>> > Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>> >
>>>>>> > Follow this link to subscribe/unsubscribe:
>>>>>> > http://public.kitware.com/mailman/listinfo/paraview
>>>>>> >
>>>>>>
>>>>>>
>>>>>>
>>>>>> --
>>>>>> Cory Quammen
>>>>>> R&D Engineer
>>>>>> Kitware, Inc.
>>>>>>
>>>>>
>>>>> _______________________________________________
>>>>> Powered by www.kitware.com
>>>>>
>>>>> Visit other Kitware open-source projects at
>>>>> http://www.kitware.com/opensource/opensource.html
>>>>>
>>>>> Please keep messages on-topic and check the ParaView Wiki at:
>>>>> http://paraview.org/Wiki/ParaView
>>>>>
>>>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>>>
>>>>> Follow this link to subscribe/unsubscribe:
>>>>> http://public.kitware.com/mailman/listinfo/paraview
>>>>>
>>>>>
>>>>
>


-- 
Ken Martin PhD
Chairman & CFO
Kitware Inc.
28 Corporate Drive
Clifton Park NY 12065
518 371 3971

This communication, including all attachments, contains confidential and
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From zachnap at gmail.com  Tue Feb 23 21:47:16 2016
From: zachnap at gmail.com (Zach)
Date: Tue, 23 Feb 2016 21:47:16 -0500
Subject: [Paraview] Importing Vector (i.e., CSV text) files
Message-ID: <CAFFsCrzKYNQ93cW_2sA1BADrv=qTjnr3ZsTa9iNny+Zpxq5=aA@mail.gmail.com>

Hello:

I am trying to import vector files into Paraview which are really just csv
text files delimited by whitespace. I am able to open the files, but they
read in as a single column and I am unable to find the "delimit options" in
any of the manuals or online materials.

Do vector files need to be formatted with a particular scheme in order for
Paraview to properly read them? Thanks

Regards,

Zach
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From wascott at sandia.gov  Tue Feb 23 21:57:09 2016
From: wascott at sandia.gov (Scott, W Alan)
Date: Wed, 24 Feb 2016 02:57:09 +0000
Subject: [Paraview] [EXTERNAL]  Importing Vector (i.e., CSV text) files
In-Reply-To: <CAFFsCrzKYNQ93cW_2sA1BADrv=qTjnr3ZsTa9iNny+Zpxq5=aA@mail.gmail.com>
References: <CAFFsCrzKYNQ93cW_2sA1BADrv=qTjnr3ZsTa9iNny+Zpxq5=aA@mail.gmail.com>
Message-ID: <580b3919fb934678894cdb8e5084d797@ES01AMSNLNT.srn.sandia.gov>

I?m not sure if white space works ? but comma?s do work.

For instance, X, Y, Z, Var does work.

Then, use the Table to Point filter.

There is more information here:  http://www.paraview.org/Wiki/Data_formats

Does that answer the question?

Alan

From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Zach
Sent: Tuesday, February 23, 2016 7:47 PM
To: paraview at paraview.org
Subject: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text) files

Hello:

I am trying to import vector files into Paraview which are really just csv text files delimited by whitespace. I am able to open the files, but they read in as a single column and I am unable to find the "delimit options" in any of the manuals or online materials.

Do vector files need to be formatted with a particular scheme in order for Paraview to properly read them? Thanks

Regards,

Zach
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From HBuesing at eonerc.rwth-aachen.de  Wed Feb 24 03:46:02 2016
From: HBuesing at eonerc.rwth-aachen.de (Buesing, Henrik)
Date: Wed, 24 Feb 2016 08:46:02 +0000
Subject: [Paraview] Edit Axes Grid
Message-ID: <DBEF383764FCE7428354CFA9A0591A86016690144B@eonblitz16.eonerc.rwth-aachen.de>

Dear all,

I'm using Paraview 5.0.0. I would like to use the "Edit Axes Grid ..." function as described here: https://blog.kitware.com/new-in-paraview-axes-grid-annotation/.
But all I can find is the old "Edit Cube Axes..." dialog. Could you point out to me where I find "Edit Axes Grid..."?

Thank you!

Henrik


--
Dipl.-Math. Henrik B?sing
Institute for Applied Geophysics and Geothermal Energy
E.ON Energy Research Center
RWTH Aachen University
------------------------------------------------------
Mathieustr. 10            |    Tel +49 (0)241 80 49907
52074 Aachen, Germany     |    Fax +49 (0)241 80 49889
------------------------------------------------------
http://www.eonerc.rwth-aachen.de/GGE
hbuesing at eonerc.rwth-aachen.de
------------------------------------------------------

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From HBuesing at eonerc.rwth-aachen.de  Wed Feb 24 03:36:16 2016
From: HBuesing at eonerc.rwth-aachen.de (Buesing, Henrik)
Date: Wed, 24 Feb 2016 08:36:16 +0000
Subject: [Paraview] Paraview 5.0.0 pdf, eps, svg export
Message-ID: <DBEF383764FCE7428354CFA9A0591A8601668FE436@eonblitz16.eonerc.rwth-aachen.de>

Dear all,

I'm trying out Paraview 5.0.0. I would like to export vector graphics. In Paraview 4.3.1 I had "Export Scene" and could export pdf, ps, eps, svg etc. Now I only have pov, vrml, webgl, x3d, x3db (which say nothing to me). So how do I get my pdf, eps or svg?

Thank you!

Henrik


--
Dipl.-Math. Henrik B?sing
Institute for Applied Geophysics and Geothermal Energy
E.ON Energy Research Center
RWTH Aachen University
------------------------------------------------------
Mathieustr. 10            |    Tel +49 (0)241 80 49907
52074 Aachen, Germany     |    Fax +49 (0)241 80 49889
------------------------------------------------------
http://www.eonerc.rwth-aachen.de/GGE
hbuesing at eonerc.rwth-aachen.de
------------------------------------------------------

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From joachim.pouderoux at kitware.com  Wed Feb 24 04:13:00 2016
From: joachim.pouderoux at kitware.com (Joachim Pouderoux)
Date: Wed, 24 Feb 2016 10:13:00 +0100
Subject: [Paraview] Paraview 5.0.0 pdf, eps, svg export
In-Reply-To: <DBEF383764FCE7428354CFA9A0591A8601668FE436@eonblitz16.eonerc.rwth-aachen.de>
References: <DBEF383764FCE7428354CFA9A0591A8601668FE436@eonblitz16.eonerc.rwth-aachen.de>
Message-ID: <CACJ=gTjuhEQ7-4TSZ-bM630brg_PDhdBoW0txRRmapoeWvxTjQ@mail.gmail.com>

Henrik,

As you might know, distributed binaries for ParaView 5.0.0 are based on the
new VTK 'OpenGL2' rendering backend which provides better rendering
efficiency. However, the VTK module for exporting visualization to a PDF or
PS file is highly dependent on the rendering engine... and the adaptation
of this module this new rendering backend is still in progress.
To enable this feature again you will have to compile ParaView 5.0 with the
legacy OpenGL(1) rendering backend, or use a previous version of the
software (4.4).

Best,

*Joachim Pouderoux*

*PhD, Technical Expert*
*Kitware SAS <http://www.kitware.fr>*


2016-02-24 9:36 GMT+01:00 Buesing, Henrik <HBuesing at eonerc.rwth-aachen.de>:

> Dear all,
>
>
>
> I?m trying out Paraview 5.0.0. I would like to export vector graphics. In
> Paraview 4.3.1 I had ?Export Scene? and could export pdf, ps, eps, svg etc.
> Now I only have pov, vrml, webgl, x3d, x3db (which say nothing to me). So
> how do I get my pdf, eps or svg?
>
> Thank you!
>
> Henrik
>
>
>
>
>
> --
>
> Dipl.-Math. Henrik B?sing
>
> Institute for Applied Geophysics and Geothermal Energy
>
> E.ON Energy Research Center
>
> RWTH Aachen University
>
> ------------------------------------------------------
>
> Mathieustr. 10            |    Tel +49 (0)241 80 49907
>
> 52074 Aachen, Germany     |    Fax +49 (0)241 80 49889
>
> ------------------------------------------------------
>
> http://www.eonerc.rwth-aachen.de/GGE
>
> hbuesing at eonerc.rwth-aachen.de
>
> ------------------------------------------------------
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From HBuesing at eonerc.rwth-aachen.de  Wed Feb 24 04:38:06 2016
From: HBuesing at eonerc.rwth-aachen.de (Buesing, Henrik)
Date: Wed, 24 Feb 2016 09:38:06 +0000
Subject: [Paraview] Paraview 5.0.0 pdf, eps, svg export
In-Reply-To: <CACJ=gTjuhEQ7-4TSZ-bM630brg_PDhdBoW0txRRmapoeWvxTjQ@mail.gmail.com>
References: <DBEF383764FCE7428354CFA9A0591A8601668FE436@eonblitz16.eonerc.rwth-aachen.de>
 <CACJ=gTjuhEQ7-4TSZ-bM630brg_PDhdBoW0txRRmapoeWvxTjQ@mail.gmail.com>
Message-ID: <DBEF383764FCE7428354CFA9A0591A86016690169E@eonblitz16.eonerc.rwth-aachen.de>

Dear Joachim,

I will use Paraview 4.4 then. Thank you!

Henrik


Von: Joachim Pouderoux [mailto:joachim.pouderoux at kitware.com]
Gesendet: 24 February 2016 10:13
An: Buesing, Henrik
Cc: paraview at paraview.org
Betreff: Re: [Paraview] Paraview 5.0.0 pdf, eps, svg export

Henrik,
As you might know, distributed binaries for ParaView 5.0.0 are based on the new VTK 'OpenGL2' rendering backend which provides better rendering efficiency. However, the VTK module for exporting visualization to a PDF or PS file is highly dependent on the rendering engine... and the adaptation of this module this new rendering backend is still in progress.
To enable this feature again you will have to compile ParaView 5.0 with the legacy OpenGL(1) rendering backend, or use a previous version of the software (4.4).
Best,

Joachim Pouderoux
PhD, Technical Expert
Kitware SAS<http://www.kitware.fr>

2016-02-24 9:36 GMT+01:00 Buesing, Henrik <HBuesing at eonerc.rwth-aachen.de<mailto:HBuesing at eonerc.rwth-aachen.de>>:
Dear all,

I?m trying out Paraview 5.0.0. I would like to export vector graphics. In Paraview 4.3.1 I had ?Export Scene? and could export pdf, ps, eps, svg etc. Now I only have pov, vrml, webgl, x3d, x3db (which say nothing to me). So how do I get my pdf, eps or svg?

Thank you!

Henrik

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From HBuesing at eonerc.rwth-aachen.de  Wed Feb 24 05:15:20 2016
From: HBuesing at eonerc.rwth-aachen.de (Buesing, Henrik)
Date: Wed, 24 Feb 2016 10:15:20 +0000
Subject: [Paraview] Edit Axes Grid
In-Reply-To: <DBEF383764FCE7428354CFA9A0591A86016690144B@eonblitz16.eonerc.rwth-aachen.de>
References: <DBEF383764FCE7428354CFA9A0591A86016690144B@eonblitz16.eonerc.rwth-aachen.de>
Message-ID: <DBEF383764FCE7428354CFA9A0591A8601669016CB@eonblitz16.eonerc.rwth-aachen.de>

Ok. The "Edit Axes Grid..." function became greyed out due to loading an old *.pvsm state file. Works fine if I just load the data.
Thank you!

Henrik

Von: Buesing, Henrik
Gesendet: 24 February 2016 09:46
An: 'paraview at paraview.org'
Betreff: Edit Axes Grid

Dear all,

I'm using Paraview 5.0.0. I would like to use the "Edit Axes Grid ..." function as described here: https://blog.kitware.com/new-in-paraview-axes-grid-annotation/.
But all I can find is the old "Edit Cube Axes..." dialog. Could you point out to me where I find "Edit Axes Grid..."?

Thank you!

Henrik


--
Dipl.-Math. Henrik B?sing
Institute for Applied Geophysics and Geothermal Energy
E.ON Energy Research Center
RWTH Aachen University
------------------------------------------------------
Mathieustr. 10            |    Tel +49 (0)241 80 49907
52074 Aachen, Germany     |    Fax +49 (0)241 80 49889
------------------------------------------------------
http://www.eonerc.rwth-aachen.de/GGE
hbuesing at eonerc.rwth-aachen.de<mailto:hbuesing at eonerc.rwth-aachen.de>
------------------------------------------------------

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From guillaume.jacquenot at gmail.com  Wed Feb 24 09:16:32 2016
From: guillaume.jacquenot at gmail.com (Guillaume Jacquenot)
Date: Wed, 24 Feb 2016 15:16:32 +0100
Subject: [Paraview] ParaView does not take into account 'TimeValues'
	attribute of VTK XML files
Message-ID: <CAB8-E4D1pgYOGhhdn=nV5imhcR5N80JwPLu0pqzy5V+2Xn0JvA@mail.gmail.com>

Dear ParaView users,

I would like to report what seems to me to be a bug.

When I import an XML Vtk file in Paraview that contains several timestep
data with a 'TimeValues' attribute, ParaView does not take into account
these time values specified. ParaView seems to replace these values with
indices.

Below is a VTK XML file (vtu) that can be used to reproduce this bug in PV
5.0.
I expect ParaView to set the correct time values (0.0 to 0.4) and not 0 to
4.
The workaround is of course to use a temporal shift scale fitler, but I
would like to avoid this.

This bug or feature has already been mentioned here
http://public.kitware.com/pipermail/vtkusers/2012-November/077262.html


<?xml version="1.0"?>
<VTKFile type="UnstructuredGrid" version="0.1" byte_order="LittleEndian"
header_type="UInt32" compressor="vtkZLibDataCompressor">
  <UnstructuredGrid  TimeValues="
0
0.1
0.2
0.3
0.4
">
    <Piece NumberOfPoints="4"
NumberOfCells="2"                   >
      <PointData>
      </PointData>
      <CellData>
      </CellData>
      <Points>
        <DataArray type="Float64" Name="Points" NumberOfComponents="3"
TimeStep="0" format="appended" RangeMin="0.17810427802"
RangeMax="1.4155910728"         offset="0"                   />
        <DataArray type="Float64" Name="Points" NumberOfComponents="3"
TimeStep="1" format="appended" RangeMin="0.36965078096"
RangeMax="1.4919238917"         offset="232"                 />
        <DataArray type="Float64" Name="Points" NumberOfComponents="3"
TimeStep="2" format="appended" RangeMin="0.042580074765"
RangeMax="1.4230685602"         offset="368"                 />
        <DataArray type="Float64" Name="Points" NumberOfComponents="3"
TimeStep="3" format="appended" RangeMin="0.78418742079"
RangeMax="1.5809500516"         offset="500"                 />
        <DataArray type="Float64" Name="Points" NumberOfComponents="3"
TimeStep="4" format="appended" RangeMin="0.13130491532"
RangeMax="1.4354029733"         offset="636"                 />
      </Points>
      <Cells>
        <DataArray type="Int64" Name="connectivity" TimeStep="0"
format="appended" RangeMin=""
RangeMax=""                     offset="96"                  />
        <DataArray type="Int64" Name="offsets" TimeStep="0"
format="appended" RangeMin=""
RangeMax=""                     offset="148"                 />
        <DataArray type="UInt8" Name="types" TimeStep="0" format="appended"
RangeMin=""                     RangeMax=""
offset="192"                 />
        <DataArray type="Int64" Name="connectivity" TimeStep="1"
format="appended" RangeMin=""
RangeMax=""                     offset="96"                  />
        <DataArray type="Int64" Name="offsets" TimeStep="1"
format="appended" RangeMin=""
RangeMax=""                     offset="148"                 />
        <DataArray type="UInt8" Name="types" TimeStep="1" format="appended"
RangeMin=""                     RangeMax=""
offset="328"                 />
        <DataArray type="Int64" Name="connectivity" TimeStep="2"
format="appended" RangeMin=""
RangeMax=""                     offset="96"                  />
        <DataArray type="Int64" Name="offsets" TimeStep="2"
format="appended" RangeMin=""
RangeMax=""                     offset="148"                 />
        <DataArray type="UInt8" Name="types" TimeStep="2" format="appended"
RangeMin=""                     RangeMax=""
offset="460"                 />
        <DataArray type="Int64" Name="connectivity" TimeStep="3"
format="appended" RangeMin=""
RangeMax=""                     offset="96"                  />
        <DataArray type="Int64" Name="offsets" TimeStep="3"
format="appended" RangeMin=""
RangeMax=""                     offset="148"                 />
        <DataArray type="UInt8" Name="types" TimeStep="3" format="appended"
RangeMin=""                     RangeMax=""
offset="596"                 />
        <DataArray type="Int64" Name="connectivity" TimeStep="4"
format="appended" RangeMin=""
RangeMax=""                     offset="96"                  />
        <DataArray type="Int64" Name="offsets" TimeStep="4"
format="appended" RangeMin=""
RangeMax=""                     offset="148"                 />
        <DataArray type="UInt8" Name="types" TimeStep="4" format="appended"
RangeMin=""                     RangeMax=""
offset="732"                 />
      </Cells>
    </Piece>
  </UnstructuredGrid>
  <AppendedData encoding="base64">

_AQAAAACAAABgAAAANQAAAA==eJxjYEAF52as/SF35th+CO+DPUw87mP/xeTr+/ajqv5gjyoOU//B/i+zhHb+9/X7Af1cGRo=AQAAAACAAAAwAAAAFQAAAA==eJxjYIAARijNhEbDxJmhNAAA8AAKAQAAAACAAAAQAAAADgAAAA==eJxjZoAANigNAABwAAo=AQAAAACAAAACAAAACgAAAA==eJxjZQUAABEACw==AQAAAACAAABgAAAANQAAAA==eJxjYEAFyttP7Y9ecX0/hPfBHibO7ngn8LfI7f2oqj/Yo4rD1H+wPy2bs5M3695+AGqpFhY=AQAAAACAAAACAAAACgAAAA==eJxjZQUAABEACw==AQAAAACAAABgAAAAMwAAAA==eJxjYEAFKXPVLPnOLrWH8D7Yw8T36H/sTz2x0x5V9Qd7VPEPcLrkSRfnG88j9gAL4hUfAQAAAACAAAACAAAACgAAAA==eJxjZQUAABEACw==AQAAAACAAABgAAAANQAAAA==eJxjYEAFn0uPmwtIvNwP4X2wh4mfVCiOZnj6fD+q6g/2qOIw9R/sXTZOea8x99l+AEJIFlk=AQAAAACAAAACAAAACgAAAA==eJxjZQUAABEACw==AQAAAACAAABgAAAANQAAAA==eJxjYEAFD1j6ymaeO7AfwvtgDxO/7tRXf0b7xH5U1R/sUcVh6j/Y906Yn/6r+Px+AJFJF/E=AQAAAACAAAACAAAACgAAAA==eJxjZQUAABEACw==
  </AppendedData>
</VTKFile>
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From carson at tacc.utexas.edu  Wed Feb 24 13:00:12 2016
From: carson at tacc.utexas.edu (Carson Brownlee)
Date: Wed, 24 Feb 2016 18:00:12 +0000
Subject: [Paraview] benchmarking through pvbatch in 5.0
Message-ID: <A1A490AB-917C-406F-9B31-1E67C6A26FA1@tacc.utexas.edu>

Hello,
we are using the same benchmark scripts through pvbatch/pvpython as we were in 4.x, however with larger models we are getting odd results.  When running a 336 million triangle isosurface of the LLNL Richmtmeyer meshkov dataset in a for loop that consists of:
for i in range(0,numRuns):
	Render()

We get reported render times of 30 seconds through pvbatch/pvpython.  Using outputs in polydatamapper, I can see it?s triggering the polydatamapper on each call to Render and the timing is consistent with what you might see if LOD is changing for each of those calls.  We set the LODThreshold to be large enough to never be triggered but something appears to be ejecting the polydata representation and regenerating on each call to Render().  If we run this script through the GUI using RunScript in the python shell, we do not see this issue, it only shows up in batch.  

Any leads on what might have changed since 4.x that would trigger this?
Carson Brownlee

From aleksejs.fomins at lspr.ch  Thu Feb 25 04:48:33 2016
From: aleksejs.fomins at lspr.ch (Aleksejs Fomins)
Date: Thu, 25 Feb 2016 10:48:33 +0100
Subject: [Paraview] How to write multiple fields to VTU
Message-ID: <56CECDF1.8030904@lspr.ch>

Dear Paraview,

After reading the VTK legacy format guide (in particular, VTU), I am left puzzled about the syntax of the following operation: adding several scalar and several vector fields to points at the same time.

Say I have two scalar fields "S1" and "S2" and two vector fields "V1" and "V2". The syntax should look something like this

<PointData Scalars="???" Vectors="???">
<DataArray type="Float32" Name="S1" NumberOfComponents="1" format="ascii"/>
<DataArray type="Float32" Name="S2" NumberOfComponents="1" format="ascii"/>
<DataArray type="Float32" Name="V1" NumberOfComponents="3" format="ascii"/>
<DataArray type="Float32" Name="V2" NumberOfComponents="3" format="ascii"/>
</PointData>

Would you be so kind to tell me what has to be written there where I have put question marks?

Best regards,
Aleksejs Fomins

From aleksejs.fomins at lspr.ch  Thu Feb 25 05:51:14 2016
From: aleksejs.fomins at lspr.ch (Aleksejs Fomins)
Date: Thu, 25 Feb 2016 11:51:14 +0100
Subject: [Paraview] How to write multiple fields to VTU
In-Reply-To: <56CECDF1.8030904@lspr.ch>
References: <56CECDF1.8030904@lspr.ch>
Message-ID: <56CEDCA2.9070803@lspr.ch>

Never mind, I guessworked that it should be

<PointData Scalars="S1,S2" Vectors="V1,V2">

Aleksejs

On 25.02.2016 10:48, Aleksejs Fomins wrote:
> Dear Paraview,
> 
> After reading the VTK legacy format guide (in particular, VTU), I am left puzzled about the syntax of the following operation: adding several scalar and several vector fields to points at the same time.
> 
> Say I have two scalar fields "S1" and "S2" and two vector fields "V1" and "V2". The syntax should look something like this
> 
> <PointData Scalars="???" Vectors="???">
> <DataArray type="Float32" Name="S1" NumberOfComponents="1" format="ascii"/>
> <DataArray type="Float32" Name="S2" NumberOfComponents="1" format="ascii"/>
> <DataArray type="Float32" Name="V1" NumberOfComponents="3" format="ascii"/>
> <DataArray type="Float32" Name="V2" NumberOfComponents="3" format="ascii"/>
> </PointData>
> 
> Would you be so kind to tell me what has to be written there where I have put question marks?
> 
> Best regards,
> Aleksejs Fomins
> _______________________________________________
> Powered by www.kitware.com
> 
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
> 
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
> 
> Search the list archives at: http://markmail.org/search/?q=ParaView
> 
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
> 

From salazardetro1 at llnl.gov  Thu Feb 25 10:52:18 2016
From: salazardetro1 at llnl.gov (Salazar De Troya, Miguel)
Date: Thu, 25 Feb 2016 15:52:18 +0000
Subject: [Paraview] Number of frames depending on the Picture size
Message-ID: <D2F46317.1816%salazardetro1@llnl.gov>

Hello

Anybody could help me with this please?

Thanks
Miguel

From: ParaView <paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>> on behalf of Miguel Salazar <salazardetro1 at llnl.gov<mailto:salazardetro1 at llnl.gov>>
Date: Tuesday, February 23, 2016 at 10:57 AM
To: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [Paraview] Number of frames depending on the Picture size

Hello

I am calling this function to write a movie


renderView1.ViewSize = [1984,1962]

WriteAnimation('./movie_png/optimization_movie.png',Magnification=1, FrameRate=1.0, Compression=False)

And I have noticed that the number of resulting PNG files depends on the Magnification variable and on the ViewSize. If I remove the line renderView1.ViewSize = [1984,1962] and leave Magnification as 1 I will get a greater amount of PNG files than if I increased Magnification or leave the line renderView1.ViewSize = [1984,1962] there. Why is this? It seems as I had to choose between the number of frames and the size of the movie.

Thanks
Miguel
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From andy.bauer at kitware.com  Thu Feb 25 11:21:27 2016
From: andy.bauer at kitware.com (Andy Bauer)
Date: Thu, 25 Feb 2016 11:21:27 -0500
Subject: [Paraview] [Non-DoD Source] Building on Cray systems
In-Reply-To: <CAOXZzG7YoP=3TvmteZm6y82iMAiNqOFhWnWQrJV+pwa3do4vsA@mail.gmail.com>
References: <CAMaOp+H1HdgBJmcHr-GWn=O9JgSDd=ubYioEwFgokZdUvOzfpg@mail.gmail.com>
 <1381337291.26567619.1454668599040.JavaMail.root@mail.gatech.edu>
 <CAOXZzG7YoP=3TvmteZm6y82iMAiNqOFhWnWQrJV+pwa3do4vsA@mail.gmail.com>
Message-ID: <CAMaOp+GWtz9RDyVpCcWO66TaXK6cK6RCgd8-uh5vWKTM6KCPVg@mail.gmail.com>

Hi Tim,

Were you able to get Catalyst built on any of those machines? I briefly
tried on Copper and Garnet with the superbuild but hit some failure that I
didn't investigate further.

Best,
Andy

On Mon, Feb 8, 2016 at 2:51 PM, Chuck Atkins <chuck.atkins at kitware.com>
wrote:

> Hi Tim,
>
> When building CMake on a Cray, you'll want to build using the host system
> compilers, i.e. /usr/bin/gcc and /usr/bin/g++, not with the cray compiler
> wrappers.  Usually I just do:
>
> module purge
> CC=/usr/bin/gcc CXX=/usr/bin/g++ /path/to/cmake_source/bootstrap
> --prefix=/path/to/cmake/install --parallel=8
> make -j8 install
>
> The resulting CMake binary can then run on either the login nodes or
> compute nodes and target anything that CMake supports.  I would also
> suggest building CMake from either the latest git master branch or the
> current 3.5 release candidate.  I've added a new platform file for the Cray
> Linux Environment that knows how to introspect the compiler wrappers,
> correctly deal with static / shared, etc, not currently available in the
> 3.4 release.  You can use it by loading your appropriate PrgEnv module
> setting CMAKE_SYSTEM_NAME=CrayLinuxEnvironment or using a toolchain file
> like this:
>
> # The name of the target operating system
> set(CMAKE_SYSTEM_NAME CrayLinuxEnvironment) # This handles all the oddball
> Cray stuff
>
> if(DEFINED ENV{ASYNCPE_DIR})    # Older Cray programming environment
>   set(COMP_DIR $ENV{ASYNCPE_DIR})
> elseif(DEFINED ENV{CRAYPE_DIR}) # Newer Cray programming environment
>   set(COMP_DIR $ENV{CRAYPE_DIR})
> else()
>   message(FATAL_ERROR "Unable to determine compiler dir")
> endif()
>
> # Set the compilers
> set(CMAKE_C_COMPILER       ${COMP_DIR}/bin/cc)
> set(CMAKE_CXX_COMPILER     ${COMP_DIR}/bin/CC)
> set(CMAKE_Fortran_COMPILER ${COMP_DIR}/bin/ftn)
>
>
> - Chuck
>
> On Fri, Feb 5, 2016 at 5:36 AM, Tim Gallagher <tim.gallagher at gatech.edu>
> wrote:
>
>> Sorry if you get this multiple times -- the original was blocked from the
>> PV list because the output log was too big. I can send the log I referred
>> to off-list to anybody who is interested.
>>
>> --------------------------------------------------
>>
>> Good morning!
>>
>> Thanks Andy and Richard for the advice.
>>
>> After banging my head on my keyboard for most of the day yesterday,
>> neither approach worked on Copper.
>>
>> For Andy's suggestion of building pv5.0 with the Cray cross compiling
>> script, I got a bunch of errors towards the end. It looks like many things
>> did build, but then those errors about an unknown system kicked in and it
>> seemed to all fall apart. I attached the output log as cray_build_pv5.0.txt
>>
>> Richard, I tried your setup as well. I initially was trying to avoid the
>> building CMake step but eventually something in the ParaviewSuperbuild
>> failed because it said it needed CMake 2.8.11 and Copper only has 2.8.10.
>> So, I took a step back and tried to build CMake. When I just do what is in
>> your script -- configure and then make -- the build fails quickly because
>> it says it cannot statically link shared libraries. So I tried to build
>> CMake using the Catamount.cmake toolchain that we use for our application
>> code as well. The initial configuration took over an hour, it sits at 95%
>> for a long time going through the portion where it looks for various
>> headers/features. But eventually it finishes and I tried to build but that
>> failed. I get:
>>
>> tgallagh at copper01:~/cmake/build> make
>> [  3%] Built target cmsys
>> [  4%] Built target cmsys_c
>> [  6%] Built target cmzlib
>> [  6%] Building C object
>> Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o
>> /u/tgallagh/cmake/cmake/Utilities/cmcurl/lib/strerror.c:32:6: error:
>> #error "strerror_r MUST be either POSIX, glibc or vxworks-style"
>>  #    error "strerror_r MUST be either POSIX, glibc or vxworks-style"
>>       ^
>> make[2]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o]
>> Error 1
>> make[1]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/all] Error 2
>>
>> So taking a big step backwards here to look at the big picture -- am I
>> (and our lab) just using Cray systems in a fundamentally incorrect way?
>> We've always struggled to get things to build when we never have had issues
>> with SGI/Intel, BlueGene, or IBM machines (even when they were using
>> PowerPC). We used to have all these same issues with our CFD code on Cray
>> as well and the only solution we found was to build all of our codes'
>> libraries statically and drop support for shared libraries.
>>
>> I appreciate the help with the scripts. If there's any follow-up advice
>> on what I'm doing wrong in both/either approach, that would be great.
>>
>> Thanks,
>>
>> Tim
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From tim.gallagher at gatech.edu  Thu Feb 25 11:28:11 2016
From: tim.gallagher at gatech.edu (Tim Gallagher)
Date: Thu, 25 Feb 2016 11:28:11 -0500 (EST)
Subject: [Paraview] [Non-DoD Source] Building on Cray systems
In-Reply-To: <CAMaOp+GWtz9RDyVpCcWO66TaXK6cK6RCgd8-uh5vWKTM6KCPVg@mail.gmail.com>
Message-ID: <940846088.29105989.1456417691509.JavaMail.root@mail.gatech.edu>

Hi Andy, 

Sorry, I thought I updated the list awhile ago! 

Using the scripts that Richard provided, I was able to build on Copper and could run the FEM coprocessing demo. But I got stuck trying to get our code to link against it. Our code is set up using the Catamount toolchain file and so things like dynamic linking don't work with the way we have been doing our build. So, I need to try and figure out how to change our build system setup to get everything to work properly. It doesn't work if we just stop using the toolchain. 

I haven't figured that bit out yet; it's on my todo list. But I was able to get PV to build with Richard's script. 

I also could not get the script that comes with the superbuild to work either, but did not dig into it because I had something that did work. 

Tim 

----- Original Message -----

From: "Andy Bauer" <andy.bauer at kitware.com> 
To: "Chuck Atkins" <chuck.atkins at kitware.com> 
Cc: "tim gallagher" <tim.gallagher at gatech.edu>, "paraview" <paraview at paraview.org> 
Sent: Thursday, February 25, 2016 11:21:27 AM 
Subject: Re: [Paraview] [Non-DoD Source] Building on Cray systems 





Hi Tim, 

Were you able to get Catalyst built on any of those machines? I briefly tried on Copper and Garnet with the superbuild but hit some failure that I didn't investigate further. 

Best, 
Andy 



On Mon, Feb 8, 2016 at 2:51 PM, Chuck Atkins < chuck.atkins at kitware.com > wrote: 








Hi Tim, 

When building CMake on a Cray, you'll want to build using the host system compilers, i.e. /usr/bin/gcc and /usr/bin/g++, not with the cray compiler wrappers. Usually I just do: 

module purge 
CC=/usr/bin/gcc CXX=/usr/bin/g++ /path/to/cmake_source/bootstrap --prefix=/path/to/cmake/install --parallel=8 
make -j8 install 

The resulting CMake binary can then run on either the login nodes or compute nodes and target anything that CMake supports. I would also suggest building CMake from either the latest git master branch or the current 3.5 release candidate. I've added a new platform file for the Cray Linux Environment that knows how to introspect the compiler wrappers, correctly deal with static / shared, etc, not currently available in the 3.4 release. You can use it by loading your appropriate PrgEnv module setting CMAKE_SYSTEM_NAME=CrayLinuxEnvironment or using a toolchain file like this: 

# The name of the target operating system 
set(CMAKE_SYSTEM_NAME CrayLinuxEnvironment) # This handles all the oddball Cray stuff 

if(DEFINED ENV{ASYNCPE_DIR}) # Older Cray programming environment 
set(COMP_DIR $ENV{ASYNCPE_DIR}) 
elseif(DEFINED ENV{CRAYPE_DIR}) # Newer Cray programming environment 
set(COMP_DIR $ENV{CRAYPE_DIR}) 
else() 
message(FATAL_ERROR "Unable to determine compiler dir") 
endif() 

# Set the compilers 
set(CMAKE_C_COMPILER ${COMP_DIR}/bin/cc) 
set(CMAKE_CXX_COMPILER ${COMP_DIR}/bin/CC) 
set(CMAKE_Fortran_COMPILER ${COMP_DIR}/bin/ftn) 






- Chuck 




On Fri, Feb 5, 2016 at 5:36 AM, Tim Gallagher < tim.gallagher at gatech.edu > wrote: 

<blockquote>




Sorry if you get this multiple times -- the original was blocked from the PV list because the output log was too big. I can send the log I referred to off-list to anybody who is interested. 

-------------------------------------------------- 

Good morning! 

Thanks Andy and Richard for the advice. 

After banging my head on my keyboard for most of the day yesterday , neither approach worked on Copper. 

For Andy's suggestion of building pv5.0 with the Cray cross compiling script, I got a bunch of errors towards the end. It looks like many things did build, but then those errors about an unknown system kicked in and it seemed to all fall apart. I attached the output log as cray_build_pv5.0.txt 

Richard, I tried your setup as well. I initially was trying to avoid the building CMake step but eventually something in the ParaviewSuperbuild failed because it said it needed CMake 2.8.11 and Copper only has 2.8.10. So, I took a step back and tried to build CMake. When I just do what is in your script -- configure and then make -- the build fails quickly because it says it cannot statically link shared libraries. So I tried to build CMake using the Catamount.cmake toolchain that we use for our application code as well. The initial configuration took over an hour, it sits at 95% for a long time going through the portion where it looks for various headers/features. But eventually it finishes and I tried to build but that failed. I get: 

tgallagh at copper01:~/cmake/build> make 
[ 3%] Built target cmsys 
[ 4%] Built target cmsys_c 
[ 6%] Built target cmzlib 
[ 6%] Building C object Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o 
/u/tgallagh/cmake/cmake/Utilities/cmcurl/lib/strerror.c:32:6: error: #error "strerror_r MUST be either POSIX, glibc or vxworks-style" 
# error "strerror_r MUST be either POSIX, glibc or vxworks-style" 
^ 
make[2]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o] Error 1 
make[1]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/all] Error 2 

So taking a big step backwards here to look at the big picture -- am I (and our lab) just using Cray systems in a fundamentally incorrect way? We've always struggled to get things to build when we never have had issues with SGI/Intel, BlueGene, or IBM machines (even when they were using PowerPC). We used to have all these same issues with our CFD code on Cray as well and the only solution we found was to build all of our codes' libraries statically and drop support for shared libraries. 

I appreciate the help with the scripts. If there's any follow-up advice on what I'm doing wrong in both/either approach, that would be great. 

Thanks, 

Tim 
_______________________________________________ 
Powered by www.kitware.com 

Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html 

Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView 

Search the list archives at: http://markmail.org/search/?q=ParaView 

Follow this link to subscribe/unsubscribe: 
http://public.kitware.com/mailman/listinfo/paraview 





_______________________________________________ 
Powered by www.kitware.com 

Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html 

Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView 

Search the list archives at: http://markmail.org/search/?q=ParaView 

Follow this link to subscribe/unsubscribe: 
http://public.kitware.com/mailman/listinfo/paraview 


</blockquote>


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From andy.bauer at kitware.com  Thu Feb 25 11:44:28 2016
From: andy.bauer at kitware.com (Andy Bauer)
Date: Thu, 25 Feb 2016 11:44:28 -0500
Subject: [Paraview] [Non-DoD Source] Building on Cray systems
In-Reply-To: <940846088.29105989.1456417691509.JavaMail.root@mail.gatech.edu>
References: <CAMaOp+GWtz9RDyVpCcWO66TaXK6cK6RCgd8-uh5vWKTM6KCPVg@mail.gmail.com>
 <940846088.29105989.1456417691509.JavaMail.root@mail.gatech.edu>
Message-ID: <CAMaOp+GLEZ8J4jcOa-NOP9KpdjSBpg=aju5DFdrwwoTe5xpr+Q@mail.gmail.com>

Hi Tim,

Yep, you did update the list a while ago. I just wanted to make sure you
weren't stuck on something that I could potentially help with.

Good luck!
Andy

On Thu, Feb 25, 2016 at 11:28 AM, Tim Gallagher <tim.gallagher at gatech.edu>
wrote:

> Hi Andy,
>
> Sorry, I thought I updated the list awhile ago!
>
> Using the scripts that Richard provided, I was able to build on Copper and
> could run the FEM coprocessing demo. But I got stuck trying to get our code
> to link against it. Our code is set up using the Catamount toolchain file
> and so things like dynamic linking don't work with the way we have been
> doing our build. So, I need to try and figure out how to change our build
> system setup to get everything to work properly. It doesn't work if we just
> stop using the toolchain.
>
> I haven't figured that bit out yet; it's on my todo list. But I was able
> to get PV to build with Richard's script.
>
> I also could not get the script that comes with the superbuild to work
> either, but did not dig into it because I had something that did work.
>
> Tim
>
> ------------------------------
> *From: *"Andy Bauer" <andy.bauer at kitware.com>
> *To: *"Chuck Atkins" <chuck.atkins at kitware.com>
> *Cc: *"tim gallagher" <tim.gallagher at gatech.edu>, "paraview" <
> paraview at paraview.org>
> *Sent: *Thursday, February 25, 2016 11:21:27 AM
> *Subject: *Re: [Paraview] [Non-DoD Source] Building on Cray systems
>
> Hi Tim,
>
> Were you able to get Catalyst built on any of those machines? I briefly
> tried on Copper and Garnet with the superbuild but hit some failure that I
> didn't investigate further.
>
> Best,
> Andy
>
> On Mon, Feb 8, 2016 at 2:51 PM, Chuck Atkins <chuck.atkins at kitware.com>
> wrote:
>
>> Hi Tim,
>>
>> When building CMake on a Cray, you'll want to build using the host system
>> compilers, i.e. /usr/bin/gcc and /usr/bin/g++, not with the cray compiler
>> wrappers.  Usually I just do:
>>
>> module purge
>> CC=/usr/bin/gcc CXX=/usr/bin/g++ /path/to/cmake_source/bootstrap
>> --prefix=/path/to/cmake/install --parallel=8
>> make -j8 install
>>
>> The resulting CMake binary can then run on either the login nodes or
>> compute nodes and target anything that CMake supports.  I would also
>> suggest building CMake from either the latest git master branch or the
>> current 3.5 release candidate.  I've added a new platform file for the Cray
>> Linux Environment that knows how to introspect the compiler wrappers,
>> correctly deal with static / shared, etc, not currently available in the
>> 3.4 release.  You can use it by loading your appropriate PrgEnv module
>> setting CMAKE_SYSTEM_NAME=CrayLinuxEnvironment or using a toolchain file
>> like this:
>>
>> # The name of the target operating system
>> set(CMAKE_SYSTEM_NAME CrayLinuxEnvironment) # This handles all the
>> oddball Cray stuff
>>
>> if(DEFINED ENV{ASYNCPE_DIR})    # Older Cray programming environment
>>   set(COMP_DIR $ENV{ASYNCPE_DIR})
>> elseif(DEFINED ENV{CRAYPE_DIR}) # Newer Cray programming environment
>>   set(COMP_DIR $ENV{CRAYPE_DIR})
>> else()
>>   message(FATAL_ERROR "Unable to determine compiler dir")
>> endif()
>>
>> # Set the compilers
>> set(CMAKE_C_COMPILER       ${COMP_DIR}/bin/cc)
>> set(CMAKE_CXX_COMPILER     ${COMP_DIR}/bin/CC)
>> set(CMAKE_Fortran_COMPILER ${COMP_DIR}/bin/ftn)
>>
>>
>> - Chuck
>>
>> On Fri, Feb 5, 2016 at 5:36 AM, Tim Gallagher <tim.gallagher at gatech.edu>
>> wrote:
>>
>>> Sorry if you get this multiple times -- the original was blocked from
>>> the PV list because the output log was too big. I can send the log I
>>> referred to off-list to anybody who is interested.
>>>
>>> --------------------------------------------------
>>>
>>> Good morning!
>>>
>>> Thanks Andy and Richard for the advice.
>>>
>>> After banging my head on my keyboard for most of the day yesterday,
>>> neither approach worked on Copper.
>>>
>>> For Andy's suggestion of building pv5.0 with the Cray cross compiling
>>> script, I got a bunch of errors towards the end. It looks like many things
>>> did build, but then those errors about an unknown system kicked in and it
>>> seemed to all fall apart. I attached the output log as cray_build_pv5.0.txt
>>>
>>> Richard, I tried your setup as well. I initially was trying to avoid the
>>> building CMake step but eventually something in the ParaviewSuperbuild
>>> failed because it said it needed CMake 2.8.11 and Copper only has 2.8.10.
>>> So, I took a step back and tried to build CMake. When I just do what is in
>>> your script -- configure and then make -- the build fails quickly because
>>> it says it cannot statically link shared libraries. So I tried to build
>>> CMake using the Catamount.cmake toolchain that we use for our application
>>> code as well. The initial configuration took over an hour, it sits at 95%
>>> for a long time going through the portion where it looks for various
>>> headers/features. But eventually it finishes and I tried to build but that
>>> failed. I get:
>>>
>>> tgallagh at copper01:~/cmake/build> make
>>> [  3%] Built target cmsys
>>> [  4%] Built target cmsys_c
>>> [  6%] Built target cmzlib
>>> [  6%] Building C object
>>> Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o
>>> /u/tgallagh/cmake/cmake/Utilities/cmcurl/lib/strerror.c:32:6: error:
>>> #error "strerror_r MUST be either POSIX, glibc or vxworks-style"
>>>  #    error "strerror_r MUST be either POSIX, glibc or vxworks-style"
>>>       ^
>>> make[2]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o]
>>> Error 1
>>> make[1]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/all] Error 2
>>>
>>> So taking a big step backwards here to look at the big picture -- am I
>>> (and our lab) just using Cray systems in a fundamentally incorrect way?
>>> We've always struggled to get things to build when we never have had issues
>>> with SGI/Intel, BlueGene, or IBM machines (even when they were using
>>> PowerPC). We used to have all these same issues with our CFD code on Cray
>>> as well and the only solution we found was to build all of our codes'
>>> libraries statically and drop support for shared libraries.
>>>
>>> I appreciate the help with the scripts. If there's any follow-up advice
>>> on what I'm doing wrong in both/either approach, that would be great.
>>>
>>> Thanks,
>>>
>>> Tim
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>
>
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From tim.gallagher at gatech.edu  Thu Feb 25 11:52:56 2016
From: tim.gallagher at gatech.edu (Tim Gallagher)
Date: Thu, 25 Feb 2016 11:52:56 -0500 (EST)
Subject: [Paraview] [Non-DoD Source] Building on Cray systems
In-Reply-To: <CAMaOp+GLEZ8J4jcOa-NOP9KpdjSBpg=aju5DFdrwwoTe5xpr+Q@mail.gmail.com>
Message-ID: <499758060.29112740.1456419176366.JavaMail.root@mail.gatech.edu>

Thanks! 

If you want to volunteer to rewrite our CMake files, I wouldn't fight you :) 

I'll let you know when I get it working! 

Tim 

----- Original Message -----

From: "Andy Bauer" <andy.bauer at kitware.com> 
To: "tim gallagher" <tim.gallagher at gatech.edu> 
Cc: "paraview" <paraview at paraview.org>, "Chuck Atkins" <chuck.atkins at kitware.com> 
Sent: Thursday, February 25, 2016 11:44:28 AM 
Subject: Re: [Paraview] [Non-DoD Source] Building on Cray systems 





Hi Tim, 

Yep, you did update the list a while ago. I just wanted to make sure you weren't stuck on something that I could potentially help with. 

Good luck! 
Andy 



On Thu, Feb 25, 2016 at 11:28 AM, Tim Gallagher < tim.gallagher at gatech.edu > wrote: 




Hi Andy, 

Sorry, I thought I updated the list awhile ago! 

Using the scripts that Richard provided, I was able to build on Copper and could run the FEM coprocessing demo. But I got stuck trying to get our code to link against it. Our code is set up using the Catamount toolchain file and so things like dynamic linking don't work with the way we have been doing our build. So, I need to try and figure out how to change our build system setup to get everything to work properly. It doesn't work if we just stop using the toolchain. 

I haven't figured that bit out yet; it's on my todo list. But I was able to get PV to build with Richard's script. 

I also could not get the script that comes with the superbuild to work either, but did not dig into it because I had something that did work. 

Tim 



From: "Andy Bauer" < andy.bauer at kitware.com > 
To: "Chuck Atkins" < chuck.atkins at kitware.com > 
Cc: "tim gallagher" < tim.gallagher at gatech.edu >, "paraview" < paraview at paraview.org > 
Sent: Thursday, February 25, 2016 11:21:27 AM 
Subject: Re: [Paraview] [Non-DoD Source] Building on Cray systems 







Hi Tim, 

Were you able to get Catalyst built on any of those machines? I briefly tried on Copper and Garnet with the superbuild but hit some failure that I didn't investigate further. 

Best, 
Andy 



On Mon, Feb 8, 2016 at 2:51 PM, Chuck Atkins < chuck.atkins at kitware.com > wrote: 

<blockquote>






Hi Tim, 

When building CMake on a Cray, you'll want to build using the host system compilers, i.e. /usr/bin/gcc and /usr/bin/g++, not with the cray compiler wrappers. Usually I just do: 

module purge 
CC=/usr/bin/gcc CXX=/usr/bin/g++ /path/to/cmake_source/bootstrap --prefix=/path/to/cmake/install --parallel=8 
make -j8 install 

The resulting CMake binary can then run on either the login nodes or compute nodes and target anything that CMake supports. I would also suggest building CMake from either the latest git master branch or the current 3.5 release candidate. I've added a new platform file for the Cray Linux Environment that knows how to introspect the compiler wrappers, correctly deal with static / shared, etc, not currently available in the 3.4 release. You can use it by loading your appropriate PrgEnv module setting CMAKE_SYSTEM_NAME=CrayLinuxEnvironment or using a toolchain file like this: 

# The name of the target operating system 
set(CMAKE_SYSTEM_NAME CrayLinuxEnvironment) # This handles all the oddball Cray stuff 

if(DEFINED ENV{ASYNCPE_DIR}) # Older Cray programming environment 
set(COMP_DIR $ENV{ASYNCPE_DIR}) 
elseif(DEFINED ENV{CRAYPE_DIR}) # Newer Cray programming environment 
set(COMP_DIR $ENV{CRAYPE_DIR}) 
else() 
message(FATAL_ERROR "Unable to determine compiler dir") 
endif() 

# Set the compilers 
set(CMAKE_C_COMPILER ${COMP_DIR}/bin/cc) 
set(CMAKE_CXX_COMPILER ${COMP_DIR}/bin/CC) 
set(CMAKE_Fortran_COMPILER ${COMP_DIR}/bin/ftn) 






- Chuck 




On Fri, Feb 5, 2016 at 5:36 AM, Tim Gallagher < tim.gallagher at gatech.edu > wrote: 

<blockquote>




Sorry if you get this multiple times -- the original was blocked from the PV list because the output log was too big. I can send the log I referred to off-list to anybody who is interested. 

-------------------------------------------------- 

Good morning! 

Thanks Andy and Richard for the advice. 

After banging my head on my keyboard for most of the day yesterday , neither approach worked on Copper. 

For Andy's suggestion of building pv5.0 with the Cray cross compiling script, I got a bunch of errors towards the end. It looks like many things did build, but then those errors about an unknown system kicked in and it seemed to all fall apart. I attached the output log as cray_build_pv5.0.txt 

Richard, I tried your setup as well. I initially was trying to avoid the building CMake step but eventually something in the ParaviewSuperbuild failed because it said it needed CMake 2.8.11 and Copper only has 2.8.10. So, I took a step back and tried to build CMake. When I just do what is in your script -- configure and then make -- the build fails quickly because it says it cannot statically link shared libraries. So I tried to build CMake using the Catamount.cmake toolchain that we use for our application code as well. The initial configuration took over an hour, it sits at 95% for a long time going through the portion where it looks for various headers/features. But eventually it finishes and I tried to build but that failed. I get: 

tgallagh at copper01:~/cmake/build> make 
[ 3%] Built target cmsys 
[ 4%] Built target cmsys_c 
[ 6%] Built target cmzlib 
[ 6%] Building C object Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o 
/u/tgallagh/cmake/cmake/Utilities/cmcurl/lib/strerror.c:32:6: error: #error "strerror_r MUST be either POSIX, glibc or vxworks-style" 
# error "strerror_r MUST be either POSIX, glibc or vxworks-style" 
^ 
make[2]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o] Error 1 
make[1]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/all] Error 2 

So taking a big step backwards here to look at the big picture -- am I (and our lab) just using Cray systems in a fundamentally incorrect way? We've always struggled to get things to build when we never have had issues with SGI/Intel, BlueGene, or IBM machines (even when they were using PowerPC). We used to have all these same issues with our CFD code on Cray as well and the only solution we found was to build all of our codes' libraries statically and drop support for shared libraries. 

I appreciate the help with the scripts. If there's any follow-up advice on what I'm doing wrong in both/either approach, that would be great. 

Thanks, 

Tim 
_______________________________________________ 
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Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html 

Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView 

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_______________________________________________ 
Powered by www.kitware.com 

Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html 

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Search the list archives at: http://markmail.org/search/?q=ParaView 

Follow this link to subscribe/unsubscribe: 
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</blockquote>



</blockquote>


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From cyndyb at email.arizona.edu  Thu Feb 25 14:30:27 2016
From: cyndyb at email.arizona.edu (Hart, Cynthia Joyce - (cyndyb))
Date: Thu, 25 Feb 2016 19:30:27 +0000
Subject: [Paraview] running Paraview vis pvbatch with NO GUI - help?
Message-ID: <E9DAA1E3-DC0F-419F-B59C-3C61827F1CF8@email.arizona.edu>

Hi folks -

I am new to Paraview and even newer to scripting with Python for Paraview (though at least, I am not new to programming!).  I have a need to  run Paraview on our HPC cluster here at the University of Arizona, and I need it to run ?headless? - I desire no GUI output at all, but to process & filter an image series and create output, to be read into a local Paraview instance later.

Here?s a few details, and my questions ? the way I am going about this, I run Paraview normally, start a trace to create a python script, read in my image series and process it, then save the script.  I then upload the script and data to our HPC.  That all works great!  However, I run into trouble fully understanding how to manipulate the DATA vs. the RENDERING of what I ultimately would like to save to disk, to read into the Paraview GUI later, off line form the HPC cluster.

So, firstly ? If I read in a csv series of images, one image/file per moment in time, when I run a filter, the filter should run on the entire series, correct?  But when I do this and then try to save the data ? in this case, a series of table to points calculations, it only saves the last one.   Ideally, I?d like to save an animation and save the data, but WITHOUT calling on the GUI / rendering aspects of Paraview.   Is this possible, and if so, how do I go about it?

I did run across this thread on the web:

http://www.cfd-online.com/Forums/openfoam/98732-paraview-shell-mode-python-script-running.html

Which mentions building Paraview with  OSMesa (CPU based offscreen rendering) enabled? sounds like what I want, but how do I go about determining if the version of Paraview on my system ~s~ built is this manner, and if indeed it is, how do I script in Python to take advantage of that?

Many thanks,

Cynthia


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From jm.lucas at gantha.com  Thu Feb 25 12:19:13 2016
From: jm.lucas at gantha.com (Jean-Michel Lucas)
Date: Thu, 25 Feb 2016 18:19:13 +0100
Subject: [Paraview] Optimize Programmable Filter execution
Message-ID: <003f01d16ff0$a63e25e0$f2ba71a0$@lucas@gantha.com>

Dear all,

 

I currently have a Programmable Filter that takes a long time to execute and I am looking for a way to optimize it.

The code loops over a large number of points and I have a lot of operations involving numpy arrays.

What are the possible steps that I could follow to make the execution faster ? The question is not very specific, I am looking for general guidelines.

 

Thanks in advance,

Jean-Michel

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From kmorel at sandia.gov  Thu Feb 25 15:07:47 2016
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Thu, 25 Feb 2016 20:07:47 +0000
Subject: [Paraview] Optimize Programmable Filter execution
Message-ID: <D2F4ABBC.2D33F%kmorel@sandia.gov>

The Programmable Filter uses a plain ol' Python interpreter. Some simple Google searches will give advice on writing more efficient Python code.

Generally speaking, Python, as with any interpreted language, does not execute all that fast. Thus, long loops in Python code are probably not going to execute very fast. Operations on numpy arrays are comparatively much faster. If you could reconstruct your loops to instead do operations on numpy arrays (which internally will loop through the elements much faster), then your code should go remarkably faster. There are lots of tricks you can do with indexing to implement features like conditional execution on a per-element basis.

-Ken


From: ParaView <paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>> on behalf of Jean-Michel Lucas <jm.lucas at gantha.com<mailto:jm.lucas at gantha.com>>
Date: Thursday, February 25, 2016 at 10:19 AM
To: 'ParaView' <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] [Paraview] Optimize Programmable Filter execution

Dear all,

I currently have a Programmable Filter that takes a long time to execute and I am looking for a way to optimize it.
The code loops over a large number of points and I have a lot of operations involving numpy arrays.
What are the possible steps that I could follow to make the execution faster ? The question is not very specific, I am looking for general guidelines.

Thanks in advance,
Jean-Michel
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From utkarsh.ayachit at kitware.com  Thu Feb 25 15:32:04 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Thu, 25 Feb 2016 15:32:04 -0500
Subject: [Paraview] running Paraview vis pvbatch with NO GUI - help?
In-Reply-To: <E9DAA1E3-DC0F-419F-B59C-3C61827F1CF8@email.arizona.edu>
References: <E9DAA1E3-DC0F-419F-B59C-3C61827F1CF8@email.arizona.edu>
Message-ID: <CADHSJjC4vVCsxADck0-8tBs_oQDdp2yfiC20R2vpYY__G01uCA@mail.gmail.com>

Cynthia,

Have you had the a look at the ParaView Guide?
http://www.paraview.org/paraview-guide/
It explains the concepts of filters and the data analysis pipelines
used in ParaView.

> So, firstly ? If I read in a csv series of images, one image/file per moment
> in time, when I run a filter, the filter should run on the entire series,
> correct?  But when I do this and then try to save the data ? in this case, a
> series of table to points calculations, it only saves the last one.
> Ideally, I?d like to save an animation and save the data, but WITHOUT
> calling on the GUI / rendering aspects of Paraview.   Is this possible, and
> if so, how do I go about it?

So if I understand this correctly, you want to open a CSV file, apply
Table to Points filter and then save the result out
as a dataset that you can open later if needed without actually doing
any rendering?

If so something like the attached Python script will do the trick. I
generated that using Trace from the GUI, but then removed all the view
related components
since I don't care about those.

You can use the pvbatch or pvpython executable to run the Python
script without the GUI.

> Which mentions building Paraview with  OSMesa (CPU based offscreen
> rendering) enabled? sounds like what I want, but how do I go about
> determining if the version of Paraview on my system ~s~ built is this
> manner, and if indeed it is, how do I script in Python to take advantage of
> that?

This is only needed if you are intending to rendering and you don't
have an X server running on your cluster.

Utkarsh
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From utkarsh.ayachit at kitware.com  Thu Feb 25 15:46:26 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Thu, 25 Feb 2016 15:46:26 -0500
Subject: [Paraview] Number of frames depending on the Picture size
In-Reply-To: <D2F46317.1816%salazardetro1@llnl.gov>
References: <D2F46317.1816%salazardetro1@llnl.gov>
Message-ID: <CADHSJjDnCCXvceP-XpCx=jPVif3=tHFCMcatjd+1O_Wi8UOtKg@mail.gmail.com>

Sorry I cannot reproduce this. Can you attach sample scripts to
demonstrate what you're seeing? You can try with one of the sample
datasets that can be downloaded from paraview.org, if you need a time
varying dataset. Also what version of ParaView are you using?

On Thu, Feb 25, 2016 at 10:52 AM, Salazar De Troya, Miguel
<salazardetro1 at llnl.gov> wrote:
> Hello
>
> Anybody could help me with this please?
>
> Thanks
> Miguel
>
> From: ParaView <paraview-bounces at paraview.org> on behalf of Miguel Salazar
> <salazardetro1 at llnl.gov>
> Date: Tuesday, February 23, 2016 at 10:57 AM
> To: "paraview at paraview.org" <paraview at paraview.org>
> Subject: [Paraview] Number of frames depending on the Picture size
>
> Hello
>
> I am calling this function to write a movie
>
> renderView1.ViewSize = [1984,1962]
>
> WriteAnimation('./movie_png/optimization_movie.png',Magnification=1,
> FrameRate=1.0, Compression=False)
>
>
> And I have noticed that the number of resulting PNG files depends on the
> Magnification variable and on the ViewSize. If I remove the line
> renderView1.ViewSize = [1984,1962] and leave Magnification as 1 I will get a
> greater amount of PNG files than if I increased Magnification or leave the
> line renderView1.ViewSize = [1984,1962] there. Why is this? It seems as I
> had to choose between the number of frames and the size of the movie.
>
> Thanks
> Miguel
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>

From wascott at sandia.gov  Thu Feb 25 19:02:54 2016
From: wascott at sandia.gov (Scott, W Alan)
Date: Fri, 26 Feb 2016 00:02:54 +0000
Subject: [Paraview] [EXTERNAL]  Importing Vector (i.e., CSV text) files
In-Reply-To: <CAFFsCrzcS9mMqP1gMZxWLJuuqVzde1Kaa7Ves199RLZdChaBYw@mail.gmail.com>
References: <CAFFsCrzKYNQ93cW_2sA1BADrv=qTjnr3ZsTa9iNny+Zpxq5=aA@mail.gmail.com>
 <580b3919fb934678894cdb8e5084d797@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrzcS9mMqP1gMZxWLJuuqVzde1Kaa7Ves199RLZdChaBYw@mail.gmail.com>
Message-ID: <580cbdb63c2e48a1951c9b84e60ce341@ES01AMSNLNT.srn.sandia.gov>

Zach,

Please keep this reply on list, so we all get to learn (and I get to be corrected when I mess up).

Try changing the Field Delimiter Characters string to be ? ?

Table to point makes points (or dots).  I don?t understand your comment about vectors.

Alan

From: Zach [mailto:zachnap at gmail.com]
Sent: Thursday, February 25, 2016 4:26 PM
To: Scott, W Alan
Subject: Re: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text) files

I saw the comma separation, but very inconvenient not to have whitespace delimit. That means I have to go through 30,000 files and change the format - sure it only requires writing a script to change, but white space delimit is a fairly basic standard.

I have used the table to point filter, but I have vector data, the filter reads an X, Y, and Z value. I have x and y location and then Ux, and Uy. So, i have only been able to get dots at the x,y locations so far but no vectors.

Thanks for the help.

Zach

On Tue, Feb 23, 2016 at 9:57 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
I?m not sure if white space works ? but comma?s do work.

For instance, X, Y, Z, Var does work.

Then, use the Table to Point filter.

There is more information here:  http://www.paraview.org/Wiki/Data_formats

Does that answer the question?

Alan

From: ParaView [mailto:paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>] On Behalf Of Zach
Sent: Tuesday, February 23, 2016 7:47 PM
To: paraview at paraview.org<mailto:paraview at paraview.org>
Subject: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text) files

Hello:

I am trying to import vector files into Paraview which are really just csv text files delimited by whitespace. I am able to open the files, but they read in as a single column and I am unable to find the "delimit options" in any of the manuals or online materials.

Do vector files need to be formatted with a particular scheme in order for Paraview to properly read them? Thanks

Regards,

Zach

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From zachnap at gmail.com  Thu Feb 25 21:52:56 2016
From: zachnap at gmail.com (Zach)
Date: Thu, 25 Feb 2016 21:52:56 -0500
Subject: [Paraview] [EXTERNAL]  Importing Vector (i.e., CSV text) files
In-Reply-To: <580cbdb63c2e48a1951c9b84e60ce341@ES01AMSNLNT.srn.sandia.gov>
References: <CAFFsCrzKYNQ93cW_2sA1BADrv=qTjnr3ZsTa9iNny+Zpxq5=aA@mail.gmail.com>
 <580b3919fb934678894cdb8e5084d797@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrzcS9mMqP1gMZxWLJuuqVzde1Kaa7Ves199RLZdChaBYw@mail.gmail.com>
 <580cbdb63c2e48a1951c9b84e60ce341@ES01AMSNLNT.srn.sandia.gov>
Message-ID: <CAFFsCrwxpmcNix5tCA++J65kzmn3UVNggAPY2jgL66YwDf1YKA@mail.gmail.com>

Alan,

I have tried the " ", and it didn't have the effect I had hoped for.

Yes, table to point makes points at the coordinates. I have vectors at
certain pixel coordinates - processed PIV images. I have (x,y) location
with a vector of velocity components (Ux, Uy) at those coordinates. The
table to point seems to be wanting a scalar value at the location.

Thanks

Zach

On Thu, Feb 25, 2016 at 7:02 PM, Scott, W Alan <wascott at sandia.gov> wrote:

> Zach,
>
>
>
> Please keep this reply on list, so we all get to learn (and I get to be
> corrected when I mess up).
>
>
>
> Try changing the Field Delimiter Characters string to be ? ?
>
>
>
> Table to point makes points (or dots).  I don?t understand your comment
> about vectors.
>
>
>
> Alan
>
>
>
> *From:* Zach [mailto:zachnap at gmail.com]
> *Sent:* Thursday, February 25, 2016 4:26 PM
> *To:* Scott, W Alan
> *Subject:* Re: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text)
> files
>
>
>
> I saw the comma separation, but very inconvenient not to have whitespace
> delimit. That means I have to go through 30,000 files and change the format
> - sure it only requires writing a script to change, but white space delimit
> is a fairly basic standard.
>
> I have used the table to point filter, but I have vector data, the filter
> reads an X, Y, and Z value. I have x and y location and then Ux, and Uy.
> So, i have only been able to get dots at the x,y locations so far but no
> vectors.
>
> Thanks for the help.
>
> Zach
>
>
>
> On Tue, Feb 23, 2016 at 9:57 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>
> I?m not sure if white space works ? but comma?s do work.
>
>
>
> For instance, X, Y, Z, Var does work.
>
>
>
> Then, use the Table to Point filter.
>
>
>
> There is more information here:  http://www.paraview.org/Wiki/Data_formats
>
>
>
> Does that answer the question?
>
>
>
> Alan
>
>
>
> *From:* ParaView [mailto:paraview-bounces at paraview.org] *On Behalf Of *
> Zach
> *Sent:* Tuesday, February 23, 2016 7:47 PM
> *To:* paraview at paraview.org
> *Subject:* [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text) files
>
>
>
> Hello:
>
> I am trying to import vector files into Paraview which are really just csv
> text files delimited by whitespace. I am able to open the files, but they
> read in as a single column and I am unable to find the "delimit options" in
> any of the manuals or online materials.
>
> Do vector files need to be formatted with a particular scheme in order for
> Paraview to properly read them? Thanks
>
> Regards,
>
> Zach
>
>
>
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From wascott at sandia.gov  Thu Feb 25 21:55:53 2016
From: wascott at sandia.gov (Scott, W Alan)
Date: Fri, 26 Feb 2016 02:55:53 +0000
Subject: [Paraview] [EXTERNAL]  Importing Vector (i.e., CSV text) files
In-Reply-To: <CAFFsCrwxpmcNix5tCA++J65kzmn3UVNggAPY2jgL66YwDf1YKA@mail.gmail.com>
References: <CAFFsCrzKYNQ93cW_2sA1BADrv=qTjnr3ZsTa9iNny+Zpxq5=aA@mail.gmail.com>
 <580b3919fb934678894cdb8e5084d797@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrzcS9mMqP1gMZxWLJuuqVzde1Kaa7Ves199RLZdChaBYw@mail.gmail.com>
 <580cbdb63c2e48a1951c9b84e60ce341@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrwxpmcNix5tCA++J65kzmn3UVNggAPY2jgL66YwDf1YKA@mail.gmail.com>
Message-ID: <076a7382c0364f8d954bf541680ddce9@ES01AMSNLNT.srn.sandia.gov>

Just guessing here ? you may have more spaces in the file than you think?  Or, PV may be looking for a space, and you have two?  That?s the reason I recommend commas.

Try this little toy problem that I use all the time:

x-coord y-coord z-coord scalar
0 0 0 0
1 0 0 1
0 1 0 2
1 1 0 2
-0.5 -0.5 1 4
-0.5 -0.5 1 5
-0.5 -0.5 1 6
-0.5 -0.5 1 7



From: Zach [mailto:zachnap at gmail.com]
Sent: Thursday, February 25, 2016 7:53 PM
To: Scott, W Alan
Cc: paraview at paraview.org
Subject: Re: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text) files

Alan,

I have tried the " ", and it didn't have the effect I had hoped for.

Yes, table to point makes points at the coordinates. I have vectors at certain pixel coordinates - processed PIV images. I have (x,y) location with a vector of velocity components (Ux, Uy) at those coordinates. The table to point seems to be wanting a scalar value at the location.

Thanks

Zach

On Thu, Feb 25, 2016 at 7:02 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
Zach,

Please keep this reply on list, so we all get to learn (and I get to be corrected when I mess up).

Try changing the Field Delimiter Characters string to be ? ?

Table to point makes points (or dots).  I don?t understand your comment about vectors.

Alan

From: Zach [mailto:zachnap at gmail.com<mailto:zachnap at gmail.com>]
Sent: Thursday, February 25, 2016 4:26 PM
To: Scott, W Alan
Subject: Re: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text) files

I saw the comma separation, but very inconvenient not to have whitespace delimit. That means I have to go through 30,000 files and change the format - sure it only requires writing a script to change, but white space delimit is a fairly basic standard.

I have used the table to point filter, but I have vector data, the filter reads an X, Y, and Z value. I have x and y location and then Ux, and Uy. So, i have only been able to get dots at the x,y locations so far but no vectors.

Thanks for the help.

Zach

On Tue, Feb 23, 2016 at 9:57 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
I?m not sure if white space works ? but comma?s do work.

For instance, X, Y, Z, Var does work.

Then, use the Table to Point filter.

There is more information here:  http://www.paraview.org/Wiki/Data_formats

Does that answer the question?

Alan

From: ParaView [mailto:paraview-bounces at paraview.org<mailto:paraview-bounces at paraview.org>] On Behalf Of Zach
Sent: Tuesday, February 23, 2016 7:47 PM
To: paraview at paraview.org<mailto:paraview at paraview.org>
Subject: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text) files

Hello:

I am trying to import vector files into Paraview which are really just csv text files delimited by whitespace. I am able to open the files, but they read in as a single column and I am unable to find the "delimit options" in any of the manuals or online materials.

Do vector files need to be formatted with a particular scheme in order for Paraview to properly read them? Thanks

Regards,

Zach


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From antech777 at gmail.com  Fri Feb 26 01:26:00 2016
From: antech777 at gmail.com (Andrew)
Date: Fri, 26 Feb 2016 09:26:00 +0300
Subject: [Paraview] ParaView 5.0.0 for Windows x64 fails to open EnSight
	Gold files
Message-ID: <CANMVBVx3v8Eej1_s9Wzv6DAQdeQXs9kVe0Oxvf4Fvty0fAtQhA@mail.gmail.com>

Hello. We use Ansys CFX in our work but the standard post-processor
CFD-Post consumes one of Ansys licenses while Paraview is free. So I often
make pictures for reports with ParaView to preserve Ansys license for
another users/needs (because other users are not familiar with ParaView and
CFD-Post may consume general "acfd" license feature that may be used for
calculations). I convert CFX results to EnSight Gold format in CFX Solver
Manager (Export Results) and then open in ParaView. It was working well on
Linux (CentOS 6.7 x64, Ubuntu 12.04 x64 with updates) but now I work with
large files and I need to use another machine that has 128 GB of RAM and
runs Windows-7 x64.
I downloaded and installed the following version:
ParaView-5.0.0-Qt4-OpenGL2-Windows-64bit.exe
When I open my EnSight-format file I receive the error message that
geometry file cannot be read. I tried to move EnSight files to a simple
location (D:\Temp) and renamed them (test.case, test.geom + edited the case
to change geometry file name to "simple" one). The same result, it cannot
find geometry file... Full error message is as follows:

ERROR: In
C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightGoldBinaryReader.cxx,
line 114
vtkEnSightGoldBinaryReader (0000000009451230): stat failed.


ERROR: In
C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightGoldBinaryReader.cxx,
line 220
vtkEnSightGoldBinaryReader (0000000009451230): Unable to open file:
D:\Storage\Media\Work\Gradirni\CFX\EnSight\C-G002L3S-R020-S000-14.5\/C-G002L3S-R020-S000.geom



ERROR: In
C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightReader.cxx, line
306
vtkEnSightGoldBinaryReader (0000000009451230): error reading geometry file


ERROR: In
C:\bbd\df0abce0\source-paraview\VTK\Common\ExecutionModel\vtkExecutive.cxx,
line 784
vtkCompositeDataPipeline (0000000008E1A640): Algorithm
vtkEnSightGoldBinaryReader(0000000009451230) returned failure for request:
vtkInformation (00000000093C3920)
  Debug: Off
  Modified Time: 214873
  Reference Count: 1
  Registered Events: (none)
  Request: REQUEST_DATA
  ALGORITHM_AFTER_FORWARD: 1
  FORWARD_DIRECTION: 0
  FROM_OUTPUT_PORT: 0

OK, I tried to open it in ParaView 4.3. It says nothing (only border of the
message window appears) and crashes. At that moment I see in the status bar
that EnSight reader progress is 100%.

Both ParaView 5.0.0 and 4.3 was tested with EnSight files exported on Linux
and Windows machine. It didn't help.

OK, I tried to export CFX results to CGNS format. ParaView 5.0.0 (without
MPI) cannot read it, so I fed it to ParaView 4.3. It says that its "unable
to filed any meshes".

I also performed an experiment on my Linux laptop. It has only 16 GB of RAM
so its unreal to work with such a big file on this machine but it reads the
same EnSight case and displays the domain! No arrays selected (mesh only),
swap file grows up to 8 GB but the file opens without errors and crashes.
It's only a test because I have not any Linux machine with memory large
enough (our Linux cluster has 128 GB of RAM on every node including master
but it has very poor video).

I switched to CFD Post for this case but I want to know are there any
workarounds to open my EnSight-format results in ParaView for Windows.

Thanks for your attention.
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From zachnap at gmail.com  Fri Feb 26 06:37:56 2016
From: zachnap at gmail.com (Zach)
Date: Fri, 26 Feb 2016 06:37:56 -0500
Subject: [Paraview] [EXTERNAL]  Importing Vector (i.e., CSV text) files
In-Reply-To: <076a7382c0364f8d954bf541680ddce9@ES01AMSNLNT.srn.sandia.gov>
References: <CAFFsCrzKYNQ93cW_2sA1BADrv=qTjnr3ZsTa9iNny+Zpxq5=aA@mail.gmail.com>
 <580b3919fb934678894cdb8e5084d797@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrzcS9mMqP1gMZxWLJuuqVzde1Kaa7Ves199RLZdChaBYw@mail.gmail.com>
 <580cbdb63c2e48a1951c9b84e60ce341@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrwxpmcNix5tCA++J65kzmn3UVNggAPY2jgL66YwDf1YKA@mail.gmail.com>
 <076a7382c0364f8d954bf541680ddce9@ES01AMSNLNT.srn.sandia.gov>
Message-ID: <CAFFsCrxageAs5WiqO7FWdK9Dsw6MQjrgRz_Fjbq6Wo_mjRkYNQ@mail.gmail.com>

I think there may be two spaces, but whitespace is whitespace. Not even
Excel gets confused by the spacing. I've tried the sample case above, but
PV still did not recognize the delimit.

I have 4 columns:

x-coord y-coord u-velocity v-velocity

The x, y, z, scalar doesn't achieve what I want.

I need something of the form:

x-coord y-coord vector-direction scalar

Thanks

On Thu, Feb 25, 2016 at 9:55 PM, Scott, W Alan <wascott at sandia.gov> wrote:

> Just guessing here ? you may have more spaces in the file than you think?
> Or, PV may be looking for a space, and you have two?  That?s the reason I
> recommend commas.
>
>
>
> Try this little toy problem that I use all the time:
>
>
>
> x-coord y-coord z-coord scalar
>
> 0 0 0 0
>
> 1 0 0 1
>
> 0 1 0 2
>
> 1 1 0 2
>
> -0.5 -0.5 1 4
>
> -0.5 -0.5 1 5
>
> -0.5 -0.5 1 6
>
> -0.5 -0.5 1 7
>
>
>
>
>
>
>
> *From:* Zach [mailto:zachnap at gmail.com]
> *Sent:* Thursday, February 25, 2016 7:53 PM
> *To:* Scott, W Alan
> *Cc:* paraview at paraview.org
>
> *Subject:* Re: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text)
> files
>
>
>
> Alan,
>
>
> I have tried the " ", and it didn't have the effect I had hoped for.
>
> Yes, table to point makes points at the coordinates. I have vectors at
> certain pixel coordinates - processed PIV images. I have (x,y) location
> with a vector of velocity components (Ux, Uy) at those coordinates. The
> table to point seems to be wanting a scalar value at the location.
>
> Thanks
>
>
>
> Zach
>
>
>
> On Thu, Feb 25, 2016 at 7:02 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>
> Zach,
>
>
>
> Please keep this reply on list, so we all get to learn (and I get to be
> corrected when I mess up).
>
>
>
> Try changing the Field Delimiter Characters string to be ? ?
>
>
>
> Table to point makes points (or dots).  I don?t understand your comment
> about vectors.
>
>
>
> Alan
>
>
>
> *From:* Zach [mailto:zachnap at gmail.com]
> *Sent:* Thursday, February 25, 2016 4:26 PM
> *To:* Scott, W Alan
> *Subject:* Re: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text)
> files
>
>
>
> I saw the comma separation, but very inconvenient not to have whitespace
> delimit. That means I have to go through 30,000 files and change the format
> - sure it only requires writing a script to change, but white space delimit
> is a fairly basic standard.
>
> I have used the table to point filter, but I have vector data, the filter
> reads an X, Y, and Z value. I have x and y location and then Ux, and Uy.
> So, i have only been able to get dots at the x,y locations so far but no
> vectors.
>
> Thanks for the help.
>
> Zach
>
>
>
> On Tue, Feb 23, 2016 at 9:57 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>
> I?m not sure if white space works ? but comma?s do work.
>
>
>
> For instance, X, Y, Z, Var does work.
>
>
>
> Then, use the Table to Point filter.
>
>
>
> There is more information here:  http://www.paraview.org/Wiki/Data_formats
>
>
>
> Does that answer the question?
>
>
>
> Alan
>
>
>
> *From:* ParaView [mailto:paraview-bounces at paraview.org] *On Behalf Of *
> Zach
> *Sent:* Tuesday, February 23, 2016 7:47 PM
> *To:* paraview at paraview.org
> *Subject:* [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text) files
>
>
>
> Hello:
>
> I am trying to import vector files into Paraview which are really just csv
> text files delimited by whitespace. I am able to open the files, but they
> read in as a single column and I am unable to find the "delimit options" in
> any of the manuals or online materials.
>
> Do vector files need to be formatted with a particular scheme in order for
> Paraview to properly read them? Thanks
>
> Regards,
>
> Zach
>
>
>
>
>
-------------- next part --------------
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From utkarsh.ayachit at kitware.com  Fri Feb 26 08:11:40 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Fri, 26 Feb 2016 08:11:40 -0500
Subject: [Paraview] ParaView 5.0.0 for Windows x64 fails to open EnSight
 Gold files
In-Reply-To: <CANMVBVx3v8Eej1_s9Wzv6DAQdeQXs9kVe0Oxvf4Fvty0fAtQhA@mail.gmail.com>
References: <CANMVBVx3v8Eej1_s9Wzv6DAQdeQXs9kVe0Oxvf4Fvty0fAtQhA@mail.gmail.com>
Message-ID: <CADHSJjC-r9bOAsxacx+b7gwxeUzJ-v-X8CArrJ2s0ht3FoBVVA@mail.gmail.com>

Adnrew,

Do you have a sample dataset to share to reproduce this issue?

Thanks
Utkarsh

On Fri, Feb 26, 2016 at 1:26 AM, Andrew <antech777 at gmail.com> wrote:
> Hello. We use Ansys CFX in our work but the standard post-processor CFD-Post
> consumes one of Ansys licenses while Paraview is free. So I often make
> pictures for reports with ParaView to preserve Ansys license for another
> users/needs (because other users are not familiar with ParaView and CFD-Post
> may consume general "acfd" license feature that may be used for
> calculations). I convert CFX results to EnSight Gold format in CFX Solver
> Manager (Export Results) and then open in ParaView. It was working well on
> Linux (CentOS 6.7 x64, Ubuntu 12.04 x64 with updates) but now I work with
> large files and I need to use another machine that has 128 GB of RAM and
> runs Windows-7 x64.
> I downloaded and installed the following version:
> ParaView-5.0.0-Qt4-OpenGL2-Windows-64bit.exe
> When I open my EnSight-format file I receive the error message that geometry
> file cannot be read. I tried to move EnSight files to a simple location
> (D:\Temp) and renamed them (test.case, test.geom + edited the case to change
> geometry file name to "simple" one). The same result, it cannot find
> geometry file... Full error message is as follows:
>
> ERROR: In
> C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightGoldBinaryReader.cxx,
> line 114
> vtkEnSightGoldBinaryReader (0000000009451230): stat failed.
>
>
> ERROR: In
> C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightGoldBinaryReader.cxx,
> line 220
> vtkEnSightGoldBinaryReader (0000000009451230): Unable to open file:
> D:\Storage\Media\Work\Gradirni\CFX\EnSight\C-G002L3S-R020-S000-14.5\/C-G002L3S-R020-S000.geom
>
>
> ERROR: In
> C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightReader.cxx, line
> 306
> vtkEnSightGoldBinaryReader (0000000009451230): error reading geometry file
>
>
> ERROR: In
> C:\bbd\df0abce0\source-paraview\VTK\Common\ExecutionModel\vtkExecutive.cxx,
> line 784
> vtkCompositeDataPipeline (0000000008E1A640): Algorithm
> vtkEnSightGoldBinaryReader(0000000009451230) returned failure for request:
> vtkInformation (00000000093C3920)
>   Debug: Off
>   Modified Time: 214873
>   Reference Count: 1
>   Registered Events: (none)
>   Request: REQUEST_DATA
>   ALGORITHM_AFTER_FORWARD: 1
>   FORWARD_DIRECTION: 0
>   FROM_OUTPUT_PORT: 0
>
> OK, I tried to open it in ParaView 4.3. It says nothing (only border of the
> message window appears) and crashes. At that moment I see in the status bar
> that EnSight reader progress is 100%.
>
> Both ParaView 5.0.0 and 4.3 was tested with EnSight files exported on Linux
> and Windows machine. It didn't help.
>
> OK, I tried to export CFX results to CGNS format. ParaView 5.0.0 (without
> MPI) cannot read it, so I fed it to ParaView 4.3. It says that its "unable
> to filed any meshes".
>
> I also performed an experiment on my Linux laptop. It has only 16 GB of RAM
> so its unreal to work with such a big file on this machine but it reads the
> same EnSight case and displays the domain! No arrays selected (mesh only),
> swap file grows up to 8 GB but the file opens without errors and crashes.
> It's only a test because I have not any Linux machine with memory large
> enough (our Linux cluster has 128 GB of RAM on every node including master
> but it has very poor video).
>
> I switched to CFD Post for this case but I want to know are there any
> workarounds to open my EnSight-format results in ParaView for Windows.
>
> Thanks for your attention.
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>

From utkarsh.ayachit at kitware.com  Fri Feb 26 08:28:50 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Fri, 26 Feb 2016 08:28:50 -0500
Subject: [Paraview] [EXTERNAL] Importing Vector (i.e., CSV text) files
In-Reply-To: <CAFFsCrxageAs5WiqO7FWdK9Dsw6MQjrgRz_Fjbq6Wo_mjRkYNQ@mail.gmail.com>
References: <CAFFsCrzKYNQ93cW_2sA1BADrv=qTjnr3ZsTa9iNny+Zpxq5=aA@mail.gmail.com>
 <580b3919fb934678894cdb8e5084d797@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrzcS9mMqP1gMZxWLJuuqVzde1Kaa7Ves199RLZdChaBYw@mail.gmail.com>
 <580cbdb63c2e48a1951c9b84e60ce341@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrwxpmcNix5tCA++J65kzmn3UVNggAPY2jgL66YwDf1YKA@mail.gmail.com>
 <076a7382c0364f8d954bf541680ddce9@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrxageAs5WiqO7FWdK9Dsw6MQjrgRz_Fjbq6Wo_mjRkYNQ@mail.gmail.com>
Message-ID: <CADHSJjBRxjGR-KxiZ=ZhBTRbHkp_cbXUNFb+6ZcCVA_J6ermaw@mail.gmail.com>

Can you attach a sample file that "does not work"? I tried spaces,
multiple spaces, commas as separators and all worked just fine for me.
I set the "Field Delimiter Characters" as a space (or comma) and also
checked "Merge Consecutive Delimiters". Likewise, the sample file Alan
included also loads for me.

Note, a CSV file will simply be read in as a Table. If you want
ParaView to interpret the x-coord, y-coord arrays as point
coordinates, you have to apply the "Table to Points" filter and select
which columns correspond to the coordinates. Similar to combine
multiple columns into a vector, you have to apply the "Calculator"
filter and use a function such as "iHat * scalar0 + jHat * scalar1".

Attached state file and csv demonstrates how a file with 4 columns can
be processed to read points and velocity vectors.

Utkarsh



On Fri, Feb 26, 2016 at 6:37 AM, Zach <zachnap at gmail.com> wrote:
> I think there may be two spaces, but whitespace is whitespace. Not even
> Excel gets confused by the spacing. I've tried the sample case above, but PV
> still did not recognize the delimit.
>
> I have 4 columns:
>
> x-coord y-coord u-velocity v-velocity
>
> The x, y, z, scalar doesn't achieve what I want.
>
> I need something of the form:
>
> x-coord y-coord vector-direction scalar
>
> Thanks
>
> On Thu, Feb 25, 2016 at 9:55 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>>
>> Just guessing here ? you may have more spaces in the file than you think?
>> Or, PV may be looking for a space, and you have two?  That?s the reason I
>> recommend commas.
>>
>>
>>
>> Try this little toy problem that I use all the time:
>>
>>
>>
>> x-coord y-coord z-coord scalar
>>
>> 0 0 0 0
>>
>> 1 0 0 1
>>
>> 0 1 0 2
>>
>> 1 1 0 2
>>
>> -0.5 -0.5 1 4
>>
>> -0.5 -0.5 1 5
>>
>> -0.5 -0.5 1 6
>>
>> -0.5 -0.5 1 7
>>
>>
>>
>>
>>
>>
>>
>> From: Zach [mailto:zachnap at gmail.com]
>> Sent: Thursday, February 25, 2016 7:53 PM
>> To: Scott, W Alan
>> Cc: paraview at paraview.org
>>
>>
>> Subject: Re: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text) files
>>
>>
>>
>> Alan,
>>
>>
>> I have tried the " ", and it didn't have the effect I had hoped for.
>>
>> Yes, table to point makes points at the coordinates. I have vectors at
>> certain pixel coordinates - processed PIV images. I have (x,y) location with
>> a vector of velocity components (Ux, Uy) at those coordinates. The table to
>> point seems to be wanting a scalar value at the location.
>>
>> Thanks
>>
>>
>>
>> Zach
>>
>>
>>
>> On Thu, Feb 25, 2016 at 7:02 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>>
>> Zach,
>>
>>
>>
>> Please keep this reply on list, so we all get to learn (and I get to be
>> corrected when I mess up).
>>
>>
>>
>> Try changing the Field Delimiter Characters string to be ? ?
>>
>>
>>
>> Table to point makes points (or dots).  I don?t understand your comment
>> about vectors.
>>
>>
>>
>> Alan
>>
>>
>>
>> From: Zach [mailto:zachnap at gmail.com]
>> Sent: Thursday, February 25, 2016 4:26 PM
>> To: Scott, W Alan
>> Subject: Re: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text) files
>>
>>
>>
>> I saw the comma separation, but very inconvenient not to have whitespace
>> delimit. That means I have to go through 30,000 files and change the format
>> - sure it only requires writing a script to change, but white space delimit
>> is a fairly basic standard.
>>
>> I have used the table to point filter, but I have vector data, the filter
>> reads an X, Y, and Z value. I have x and y location and then Ux, and Uy. So,
>> i have only been able to get dots at the x,y locations so far but no
>> vectors.
>>
>> Thanks for the help.
>>
>> Zach
>>
>>
>>
>> On Tue, Feb 23, 2016 at 9:57 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>>
>> I?m not sure if white space works ? but comma?s do work.
>>
>>
>>
>> For instance, X, Y, Z, Var does work.
>>
>>
>>
>> Then, use the Table to Point filter.
>>
>>
>>
>> There is more information here:  http://www.paraview.org/Wiki/Data_formats
>>
>>
>>
>> Does that answer the question?
>>
>>
>>
>> Alan
>>
>>
>>
>> From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Zach
>> Sent: Tuesday, February 23, 2016 7:47 PM
>> To: paraview at paraview.org
>> Subject: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text) files
>>
>>
>>
>> Hello:
>>
>> I am trying to import vector files into Paraview which are really just csv
>> text files delimited by whitespace. I am able to open the files, but they
>> read in as a single column and I am unable to find the "delimit options" in
>> any of the manuals or online materials.
>>
>> Do vector files need to be formatted with a particular scheme in order for
>> Paraview to properly read them? Thanks
>>
>> Regards,
>>
>> Zach
>>
>>
>>
>>
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
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From utkarsh.ayachit at kitware.com  Fri Feb 26 08:32:21 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Fri, 26 Feb 2016 08:32:21 -0500
Subject: [Paraview] benchmarking through pvbatch in 5.0
In-Reply-To: <A1A490AB-917C-406F-9B31-1E67C6A26FA1@tacc.utexas.edu>
References: <A1A490AB-917C-406F-9B31-1E67C6A26FA1@tacc.utexas.edu>
Message-ID: <CADHSJjB2Cd1-mzLwBHZD5pjHfjCgPsjskc4WEBBNjbDBRm-SCw@mail.gmail.com>

Carson,

Can you share the data/script? I can dig in to see what could be
happening. BTW, Render() will never use LOD irrespective of
LODThreshold since Render() always triggers full-res render aka
StillRender.

Another thing to try is to run with "-dr" in both cases: pvpython and
ParaVIew GUI + Python shell. Do you still see different results
between the two?

Utkarsh

On Wed, Feb 24, 2016 at 1:00 PM, Carson Brownlee <carson at tacc.utexas.edu> wrote:
> Hello,
> we are using the same benchmark scripts through pvbatch/pvpython as we were in 4.x, however with larger models we are getting odd results.  When running a 336 million triangle isosurface of the LLNL Richmtmeyer meshkov dataset in a for loop that consists of:
> for i in range(0,numRuns):
>         Render()
>
> We get reported render times of 30 seconds through pvbatch/pvpython.  Using outputs in polydatamapper, I can see it?s triggering the polydatamapper on each call to Render and the timing is consistent with what you might see if LOD is changing for each of those calls.  We set the LODThreshold to be large enough to never be triggered but something appears to be ejecting the polydata representation and regenerating on each call to Render().  If we run this script through the GUI using RunScript in the python shell, we do not see this issue, it only shows up in batch.
>
> Any leads on what might have changed since 4.x that would trigger this?
> Carson Brownlee
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview

From tim91decoster at gmail.com  Fri Feb 26 08:54:33 2016
From: tim91decoster at gmail.com (Tim De Coster)
Date: Fri, 26 Feb 2016 14:54:33 +0100
Subject: [Paraview] Run multiple processes at the same time
Message-ID: <CAAfnFpiLzxz4zVEi7HdF7FFgCn4N=Fi4rB8p6zciqQComVM9mw@mail.gmail.com>

Hi all,

I am stuck with a problem regarding ParaView (version 4.0.1 64-bit),
running on Ubuntu 14.04. I have written a python driver script that calls
for a script that is executed with pvpython. I need to do this about
100.000 times. I have thus written a loop around the call to pvpython to
execute things. It seems however that I execute one process at a time,
after which paraview closes (which I want) and then the next process is
called. The processes I am running are however not super intensive, so it
should be possible to run 10 to 100 of them at the same time in parallel. I
don't seem to find how I can do this. Is there anybody who can provide me
with an idea how to do this?

With kind regards,
Tim

Example script of what I have at the moment:

import subprocess
import numpy as np
import shutil

def main():

    for-loop generating filenames
           print 'We are at', filename3
           subprocess.call(['/usr/bin/pvpython', 'MakeMovie.py', '-f',
filename3])
           shutil.rmtree('./{0}'.format(filename3))

if __name__ == '__main__':
    main()
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From yohann.vautrin at safran.fr  Fri Feb 26 10:09:41 2016
From: yohann.vautrin at safran.fr (VAUTRIN Yohann (SAFRAN))
Date: Fri, 26 Feb 2016 15:09:41 +0000
Subject: [Paraview] [Catalyst] Setting the MPI Comm in Python
Message-ID: <28354c05fea64a7381d77fd77cc57ea5@Y00330G.rd1.rf1>

Hi,



I'm working on a Catalyst adaptor written in Python for one of the CFD codes I use at work and I'm having trouble setting the MPI communicator I want the vtkCPProcessor object to use (in order to use a subset of MPI_COMM_WORLD). The MPI communicator I create is a mpi4py.MPI_Comm object, which I convert to a vtkMPICommunicator object using vtk.vtkMPI4PyCommunicator.ConvertToVTK. However vtk.vtkPVCatalystPython.vtkCPProcessor.Initialize is expecting a vtkMPICommunicatorOpaqueComm object and there does not seem to be a way for me to create such an object from the Python interface. Am I missing something here or is something not wrapped correctly or wrong?



For the moment I use mpi4py.MPI.COMM_WORLD to test everything. The following minimal example replicates my problem:

import mpi4py.MPI

import vtk

comm = mpi4py.MPI.COMM_WORLD

coprocessor = vtk.vtkPVCatalystPython.vtkCPProcessor()

coprocessor.Initialize(vtk.vtkMPI4PyCommunicator.ConvertToVTK(comm))

The last line fails with this message:

TypeError: Initialize argument 1: method requires a vtkMPICommunicatorOpaqueComm, a vtkMPICommunicator was provided.



I hope I post on the right mailing list as this could actually be a problem in VTK.



Thank you for your help.



Best,

Yohann V.

#
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From samuelkey at bresnan.net  Fri Feb 26 11:31:02 2016
From: samuelkey at bresnan.net (Samuel Key)
Date: Fri, 26 Feb 2016 09:31:02 -0700
Subject: [Paraview] ParaView 5.0.0 for Windows x64 fails to open EnSight
 Gold files
In-Reply-To: <CANMVBVx3v8Eej1_s9Wzv6DAQdeQXs9kVe0Oxvf4Fvty0fAtQhA@mail.gmail.com>
References: <CANMVBVx3v8Eej1_s9Wzv6DAQdeQXs9kVe0Oxvf4Fvty0fAtQhA@mail.gmail.com>
Message-ID: <56D07DC6.5050006@bresnan.net>

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From zachnap at gmail.com  Fri Feb 26 12:52:51 2016
From: zachnap at gmail.com (Zach)
Date: Fri, 26 Feb 2016 12:52:51 -0500
Subject: [Paraview] [EXTERNAL] Importing Vector (i.e., CSV text) files
In-Reply-To: <CADHSJjBRxjGR-KxiZ=ZhBTRbHkp_cbXUNFb+6ZcCVA_J6ermaw@mail.gmail.com>
References: <CAFFsCrzKYNQ93cW_2sA1BADrv=qTjnr3ZsTa9iNny+Zpxq5=aA@mail.gmail.com>
 <580b3919fb934678894cdb8e5084d797@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrzcS9mMqP1gMZxWLJuuqVzde1Kaa7Ves199RLZdChaBYw@mail.gmail.com>
 <580cbdb63c2e48a1951c9b84e60ce341@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrwxpmcNix5tCA++J65kzmn3UVNggAPY2jgL66YwDf1YKA@mail.gmail.com>
 <076a7382c0364f8d954bf541680ddce9@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrxageAs5WiqO7FWdK9Dsw6MQjrgRz_Fjbq6Wo_mjRkYNQ@mail.gmail.com>
 <CADHSJjBRxjGR-KxiZ=ZhBTRbHkp_cbXUNFb+6ZcCVA_J6ermaw@mail.gmail.com>
Message-ID: <CAFFsCrz52ii0Li7DoNOJEvjsPiUNRcHegZq8erUTrCGzJxknbg@mail.gmail.com>

I was able to properly load the file you posted and the values posted by
Scott. I am not certain why it did not work before, perhaps I did not have
the "Merge Consecutive Delimiters" selected, but thought for sure I had
toggled it.

It also seems that after playing around with the "Calculator" I am able to
load the vectors as expected. Still very new to PV.

So, it seems that the two of you have been helpful in remedying my
ignorance. Thanks.

Zach

On Fri, Feb 26, 2016 at 8:28 AM, Utkarsh Ayachit <
utkarsh.ayachit at kitware.com> wrote:

> Can you attach a sample file that "does not work"? I tried spaces,
> multiple spaces, commas as separators and all worked just fine for me.
> I set the "Field Delimiter Characters" as a space (or comma) and also
> checked "Merge Consecutive Delimiters". Likewise, the sample file Alan
> included also loads for me.
>
> Note, a CSV file will simply be read in as a Table. If you want
> ParaView to interpret the x-coord, y-coord arrays as point
> coordinates, you have to apply the "Table to Points" filter and select
> which columns correspond to the coordinates. Similar to combine
> multiple columns into a vector, you have to apply the "Calculator"
> filter and use a function such as "iHat * scalar0 + jHat * scalar1".
>
> Attached state file and csv demonstrates how a file with 4 columns can
> be processed to read points and velocity vectors.
>
> Utkarsh
>
>
>
> On Fri, Feb 26, 2016 at 6:37 AM, Zach <zachnap at gmail.com> wrote:
> > I think there may be two spaces, but whitespace is whitespace. Not even
> > Excel gets confused by the spacing. I've tried the sample case above,
> but PV
> > still did not recognize the delimit.
> >
> > I have 4 columns:
> >
> > x-coord y-coord u-velocity v-velocity
> >
> > The x, y, z, scalar doesn't achieve what I want.
> >
> > I need something of the form:
> >
> > x-coord y-coord vector-direction scalar
> >
> > Thanks
> >
> > On Thu, Feb 25, 2016 at 9:55 PM, Scott, W Alan <wascott at sandia.gov>
> wrote:
> >>
> >> Just guessing here ? you may have more spaces in the file than you
> think?
> >> Or, PV may be looking for a space, and you have two?  That?s the reason
> I
> >> recommend commas.
> >>
> >>
> >>
> >> Try this little toy problem that I use all the time:
> >>
> >>
> >>
> >> x-coord y-coord z-coord scalar
> >>
> >> 0 0 0 0
> >>
> >> 1 0 0 1
> >>
> >> 0 1 0 2
> >>
> >> 1 1 0 2
> >>
> >> -0.5 -0.5 1 4
> >>
> >> -0.5 -0.5 1 5
> >>
> >> -0.5 -0.5 1 6
> >>
> >> -0.5 -0.5 1 7
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >> From: Zach [mailto:zachnap at gmail.com]
> >> Sent: Thursday, February 25, 2016 7:53 PM
> >> To: Scott, W Alan
> >> Cc: paraview at paraview.org
> >>
> >>
> >> Subject: Re: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text)
> files
> >>
> >>
> >>
> >> Alan,
> >>
> >>
> >> I have tried the " ", and it didn't have the effect I had hoped for.
> >>
> >> Yes, table to point makes points at the coordinates. I have vectors at
> >> certain pixel coordinates - processed PIV images. I have (x,y) location
> with
> >> a vector of velocity components (Ux, Uy) at those coordinates. The
> table to
> >> point seems to be wanting a scalar value at the location.
> >>
> >> Thanks
> >>
> >>
> >>
> >> Zach
> >>
> >>
> >>
> >> On Thu, Feb 25, 2016 at 7:02 PM, Scott, W Alan <wascott at sandia.gov>
> wrote:
> >>
> >> Zach,
> >>
> >>
> >>
> >> Please keep this reply on list, so we all get to learn (and I get to be
> >> corrected when I mess up).
> >>
> >>
> >>
> >> Try changing the Field Delimiter Characters string to be ? ?
> >>
> >>
> >>
> >> Table to point makes points (or dots).  I don?t understand your comment
> >> about vectors.
> >>
> >>
> >>
> >> Alan
> >>
> >>
> >>
> >> From: Zach [mailto:zachnap at gmail.com]
> >> Sent: Thursday, February 25, 2016 4:26 PM
> >> To: Scott, W Alan
> >> Subject: Re: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text)
> files
> >>
> >>
> >>
> >> I saw the comma separation, but very inconvenient not to have whitespace
> >> delimit. That means I have to go through 30,000 files and change the
> format
> >> - sure it only requires writing a script to change, but white space
> delimit
> >> is a fairly basic standard.
> >>
> >> I have used the table to point filter, but I have vector data, the
> filter
> >> reads an X, Y, and Z value. I have x and y location and then Ux, and
> Uy. So,
> >> i have only been able to get dots at the x,y locations so far but no
> >> vectors.
> >>
> >> Thanks for the help.
> >>
> >> Zach
> >>
> >>
> >>
> >> On Tue, Feb 23, 2016 at 9:57 PM, Scott, W Alan <wascott at sandia.gov>
> wrote:
> >>
> >> I?m not sure if white space works ? but comma?s do work.
> >>
> >>
> >>
> >> For instance, X, Y, Z, Var does work.
> >>
> >>
> >>
> >> Then, use the Table to Point filter.
> >>
> >>
> >>
> >> There is more information here:
> http://www.paraview.org/Wiki/Data_formats
> >>
> >>
> >>
> >> Does that answer the question?
> >>
> >>
> >>
> >> Alan
> >>
> >>
> >>
> >> From: ParaView [mailto:paraview-bounces at paraview.org] On Behalf Of Zach
> >> Sent: Tuesday, February 23, 2016 7:47 PM
> >> To: paraview at paraview.org
> >> Subject: [EXTERNAL] [Paraview] Importing Vector (i.e., CSV text) files
> >>
> >>
> >>
> >> Hello:
> >>
> >> I am trying to import vector files into Paraview which are really just
> csv
> >> text files delimited by whitespace. I am able to open the files, but
> they
> >> read in as a single column and I am unable to find the "delimit
> options" in
> >> any of the manuals or online materials.
> >>
> >> Do vector files need to be formatted with a particular scheme in order
> for
> >> Paraview to properly read them? Thanks
> >>
> >> Regards,
> >>
> >> Zach
> >>
> >>
> >>
> >>
> >
> >
> >
> > _______________________________________________
> > Powered by www.kitware.com
> >
> > Visit other Kitware open-source projects at
> > http://www.kitware.com/opensource/opensource.html
> >
> > Please keep messages on-topic and check the ParaView Wiki at:
> > http://paraview.org/Wiki/ParaView
> >
> > Search the list archives at: http://markmail.org/search/?q=ParaView
> >
> > Follow this link to subscribe/unsubscribe:
> > http://public.kitware.com/mailman/listinfo/paraview
> >
>
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From wturner at hep.ph.liv.ac.uk  Fri Feb 26 13:49:47 2016
From: wturner at hep.ph.liv.ac.uk (wturner)
Date: Fri, 26 Feb 2016 18:49:47 +0000
Subject: [Paraview] Slow loading data with geometry
Message-ID: <8531f59b1b7854ef8a850ec9becdc181@hep.ph.liv.ac.uk>

Hi all,

This should be an easy one. I've got GEANT4 exported geometry and 
events. I've got a plugin to convert from GEANT to VTK I cut down the 
geometry to what I need, save it as VTM and use this in the future. If I 
load the HEPREP.zip events without the geometry I can press play and 
flip though event by event quickly, ~10ms per event.. But if I try and 
flip through events with geometry it takes ~10-20seconds per event.

I've tried right clicking on the geom and selecting "ignore time", but 
no luck. Can't find anything in the documentation.

Thanks,
WT

From cory.quammen at kitware.com  Fri Feb 26 14:45:59 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Fri, 26 Feb 2016 13:45:59 -0600
Subject: [Paraview] Slow loading data with geometry
In-Reply-To: <8531f59b1b7854ef8a850ec9becdc181@hep.ph.liv.ac.uk>
References: <8531f59b1b7854ef8a850ec9becdc181@hep.ph.liv.ac.uk>
Message-ID: <CAB5Fpx6w0PiOdYo-YD_BpOpMBkcS+ML-a3kNH-zZrG_BUrs5Nw@mail.gmail.com>

Hi WT,

Is this a new problem or is this the first time you have tried this. If
this is a new problem, in which version of ParaView did it work quickly and
in which version of ParaView did it start? If this is your first time
trying this, how large are your geometries you are trying to display?

Thanks,
Cory

On Fri, Feb 26, 2016 at 12:49 PM, wturner <wturner at hep.ph.liv.ac.uk> wrote:

> Hi all,
>
> This should be an easy one. I've got GEANT4 exported geometry and events.
> I've got a plugin to convert from GEANT to VTK I cut down the geometry to
> what I need, save it as VTM and use this in the future. If I load the
> HEPREP.zip events without the geometry I can press play and flip though
> event by event quickly, ~10ms per event.. But if I try and flip through
> events with geometry it takes ~10-20seconds per event.
>
> I've tried right clicking on the geom and selecting "ignore time", but no
> luck. Can't find anything in the documentation.
>
> Thanks,
> WT
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.
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From utkarsh.ayachit at kitware.com  Fri Feb 26 15:00:15 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Fri, 26 Feb 2016 15:00:15 -0500
Subject: [Paraview] [EXTERNAL] Importing Vector (i.e., CSV text) files
In-Reply-To: <CAFFsCrz52ii0Li7DoNOJEvjsPiUNRcHegZq8erUTrCGzJxknbg@mail.gmail.com>
References: <CAFFsCrzKYNQ93cW_2sA1BADrv=qTjnr3ZsTa9iNny+Zpxq5=aA@mail.gmail.com>
 <580b3919fb934678894cdb8e5084d797@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrzcS9mMqP1gMZxWLJuuqVzde1Kaa7Ves199RLZdChaBYw@mail.gmail.com>
 <580cbdb63c2e48a1951c9b84e60ce341@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrwxpmcNix5tCA++J65kzmn3UVNggAPY2jgL66YwDf1YKA@mail.gmail.com>
 <076a7382c0364f8d954bf541680ddce9@ES01AMSNLNT.srn.sandia.gov>
 <CAFFsCrxageAs5WiqO7FWdK9Dsw6MQjrgRz_Fjbq6Wo_mjRkYNQ@mail.gmail.com>
 <CADHSJjBRxjGR-KxiZ=ZhBTRbHkp_cbXUNFb+6ZcCVA_J6ermaw@mail.gmail.com>
 <CAFFsCrz52ii0Li7DoNOJEvjsPiUNRcHegZq8erUTrCGzJxknbg@mail.gmail.com>
Message-ID: <CADHSJjCCw-02vy7appyasgYiMOdakEQC=sq3aLLsi6Pd1whukQ@mail.gmail.com>

> So, it seems that the two of you have been helpful in remedying my
> ignorance. Thanks.

Glad to help. I'd also suggested grabbing the free ParaVIew Guide PDF
to get a handle of some of the pipeline concepts in ParaView.

http://www.paraview.org/paraview-guide/

Utkarsh

From tim.gallagher at gatech.edu  Fri Feb 26 16:09:31 2016
From: tim.gallagher at gatech.edu (Tim Gallagher)
Date: Fri, 26 Feb 2016 16:09:31 -0500 (EST)
Subject: [Paraview] [Non-DoD Source] Building on Cray systems
In-Reply-To: <CAMaOp+GLEZ8J4jcOa-NOP9KpdjSBpg=aju5DFdrwwoTe5xpr+Q@mail.gmail.com>
Message-ID: <2075836001.29298514.1456520971973.JavaMail.root@mail.gatech.edu>

Hi Andy, 

I finally buckled down and got everything updated in our code to handle dynamic linking on Crays. It was actually pretty easy to write the platform file for it. 

I was able to build and run with coprocessing on Copper. I will be trying on Excalibur, Gordon, Conrad, Shepard and Lightning next. For all of those, I will try the superbuild provided script first to see if it works. Hopefully it does. 

Tim 

----- Original Message -----

From: "Andy Bauer" <andy.bauer at kitware.com> 
To: "tim gallagher" <tim.gallagher at gatech.edu> 
Cc: "paraview" <paraview at paraview.org>, "Chuck Atkins" <chuck.atkins at kitware.com> 
Sent: Thursday, February 25, 2016 11:44:28 AM 
Subject: Re: [Paraview] [Non-DoD Source] Building on Cray systems 





Hi Tim, 

Yep, you did update the list a while ago. I just wanted to make sure you weren't stuck on something that I could potentially help with. 

Good luck! 
Andy 



On Thu, Feb 25, 2016 at 11:28 AM, Tim Gallagher < tim.gallagher at gatech.edu > wrote: 




Hi Andy, 

Sorry, I thought I updated the list awhile ago! 

Using the scripts that Richard provided, I was able to build on Copper and could run the FEM coprocessing demo. But I got stuck trying to get our code to link against it. Our code is set up using the Catamount toolchain file and so things like dynamic linking don't work with the way we have been doing our build. So, I need to try and figure out how to change our build system setup to get everything to work properly. It doesn't work if we just stop using the toolchain. 

I haven't figured that bit out yet; it's on my todo list. But I was able to get PV to build with Richard's script. 

I also could not get the script that comes with the superbuild to work either, but did not dig into it because I had something that did work. 

Tim 



From: "Andy Bauer" < andy.bauer at kitware.com > 
To: "Chuck Atkins" < chuck.atkins at kitware.com > 
Cc: "tim gallagher" < tim.gallagher at gatech.edu >, "paraview" < paraview at paraview.org > 
Sent: Thursday, February 25, 2016 11:21:27 AM 
Subject: Re: [Paraview] [Non-DoD Source] Building on Cray systems 







Hi Tim, 

Were you able to get Catalyst built on any of those machines? I briefly tried on Copper and Garnet with the superbuild but hit some failure that I didn't investigate further. 

Best, 
Andy 



On Mon, Feb 8, 2016 at 2:51 PM, Chuck Atkins < chuck.atkins at kitware.com > wrote: 

<blockquote>






Hi Tim, 

When building CMake on a Cray, you'll want to build using the host system compilers, i.e. /usr/bin/gcc and /usr/bin/g++, not with the cray compiler wrappers. Usually I just do: 

module purge 
CC=/usr/bin/gcc CXX=/usr/bin/g++ /path/to/cmake_source/bootstrap --prefix=/path/to/cmake/install --parallel=8 
make -j8 install 

The resulting CMake binary can then run on either the login nodes or compute nodes and target anything that CMake supports. I would also suggest building CMake from either the latest git master branch or the current 3.5 release candidate. I've added a new platform file for the Cray Linux Environment that knows how to introspect the compiler wrappers, correctly deal with static / shared, etc, not currently available in the 3.4 release. You can use it by loading your appropriate PrgEnv module setting CMAKE_SYSTEM_NAME=CrayLinuxEnvironment or using a toolchain file like this: 

# The name of the target operating system 
set(CMAKE_SYSTEM_NAME CrayLinuxEnvironment) # This handles all the oddball Cray stuff 

if(DEFINED ENV{ASYNCPE_DIR}) # Older Cray programming environment 
set(COMP_DIR $ENV{ASYNCPE_DIR}) 
elseif(DEFINED ENV{CRAYPE_DIR}) # Newer Cray programming environment 
set(COMP_DIR $ENV{CRAYPE_DIR}) 
else() 
message(FATAL_ERROR "Unable to determine compiler dir") 
endif() 

# Set the compilers 
set(CMAKE_C_COMPILER ${COMP_DIR}/bin/cc) 
set(CMAKE_CXX_COMPILER ${COMP_DIR}/bin/CC) 
set(CMAKE_Fortran_COMPILER ${COMP_DIR}/bin/ftn) 






- Chuck 




On Fri, Feb 5, 2016 at 5:36 AM, Tim Gallagher < tim.gallagher at gatech.edu > wrote: 

<blockquote>




Sorry if you get this multiple times -- the original was blocked from the PV list because the output log was too big. I can send the log I referred to off-list to anybody who is interested. 

-------------------------------------------------- 

Good morning! 

Thanks Andy and Richard for the advice. 

After banging my head on my keyboard for most of the day yesterday , neither approach worked on Copper. 

For Andy's suggestion of building pv5.0 with the Cray cross compiling script, I got a bunch of errors towards the end. It looks like many things did build, but then those errors about an unknown system kicked in and it seemed to all fall apart. I attached the output log as cray_build_pv5.0.txt 

Richard, I tried your setup as well. I initially was trying to avoid the building CMake step but eventually something in the ParaviewSuperbuild failed because it said it needed CMake 2.8.11 and Copper only has 2.8.10. So, I took a step back and tried to build CMake. When I just do what is in your script -- configure and then make -- the build fails quickly because it says it cannot statically link shared libraries. So I tried to build CMake using the Catamount.cmake toolchain that we use for our application code as well. The initial configuration took over an hour, it sits at 95% for a long time going through the portion where it looks for various headers/features. But eventually it finishes and I tried to build but that failed. I get: 

tgallagh at copper01:~/cmake/build> make 
[ 3%] Built target cmsys 
[ 4%] Built target cmsys_c 
[ 6%] Built target cmzlib 
[ 6%] Building C object Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o 
/u/tgallagh/cmake/cmake/Utilities/cmcurl/lib/strerror.c:32:6: error: #error "strerror_r MUST be either POSIX, glibc or vxworks-style" 
# error "strerror_r MUST be either POSIX, glibc or vxworks-style" 
^ 
make[2]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o] Error 1 
make[1]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/all] Error 2 

So taking a big step backwards here to look at the big picture -- am I (and our lab) just using Cray systems in a fundamentally incorrect way? We've always struggled to get things to build when we never have had issues with SGI/Intel, BlueGene, or IBM machines (even when they were using PowerPC). We used to have all these same issues with our CFD code on Cray as well and the only solution we found was to build all of our codes' libraries statically and drop support for shared libraries. 

I appreciate the help with the scripts. If there's any follow-up advice on what I'm doing wrong in both/either approach, that would be great. 

Thanks, 

Tim 
_______________________________________________ 
Powered by www.kitware.com 

Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html 

Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView 

Search the list archives at: http://markmail.org/search/?q=ParaView 

Follow this link to subscribe/unsubscribe: 
http://public.kitware.com/mailman/listinfo/paraview 





_______________________________________________ 
Powered by www.kitware.com 

Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html 

Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView 

Search the list archives at: http://markmail.org/search/?q=ParaView 

Follow this link to subscribe/unsubscribe: 
http://public.kitware.com/mailman/listinfo/paraview 


</blockquote>



</blockquote>


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From snakexf at gmail.com  Sat Feb 27 04:19:02 2016
From: snakexf at gmail.com (Feng Xing)
Date: Sat, 27 Feb 2016 10:19:02 +0100
Subject: [Paraview] GetNumberOfArraysEnabled()' failed
Message-ID: <2FB62305-5C3B-458C-A1AD-E96C16C04580@gmail.com>

Hello everyone, 

When I open a .pvtu (XML) file from Paraview 4.2, I occur a "GetNumberOfArraysEnabled() failed error".

    paraview: /softs/ARCHIVES/ParaView-v4.2.0-source/VTK/IO/XML/vtkXMLDataReader.cxx:317: 
    virtual void vtkXMLDataReader::SetupOutputData(): Assertion `this->NumberOfCellArrays == 
    this-   >CellDataArraySelection->GetNumberOfArraysEnabled()? failed; Aborted

However, it seems ok for Paraview 5.0, I would like to ask if it is a bug in the old version or vtk has changed something?

Thank you very much,

Feng Xing
Postdoc Inria, France

From leoni.massimiliano1 at gmail.com  Sat Feb 27 04:24:35 2016
From: leoni.massimiliano1 at gmail.com (Massimiliano Leoni)
Date: Sat, 27 Feb 2016 10:24:35 +0100
Subject: [Paraview] Run multiple processes at the same time
In-Reply-To: <CAAfnFpiLzxz4zVEi7HdF7FFgCn4N=Fi4rB8p6zciqQComVM9mw@mail.gmail.com>
References: <CAAfnFpiLzxz4zVEi7HdF7FFgCn4N=Fi4rB8p6zciqQComVM9mw@mail.gmail.com>
Message-ID: <7791162.7uSRD7qXuX@debianxps>

With mpi4py you can have multiple python processes running in parallel.
See this script for a very basic use example:

import sys
from mpi4py import MPI

comm= MPI.COMM_WORLD
rank = comm.Get_rank()

print "%d" % (rank)

which you can launch by mpirun -np N script.py.

It is, however, a bad idea to have more parallel threads than available 
processors, as the overhead on the OS scheduler increases.
If you have a machine with N cores, your best bet is to run with N processes 
at a time.
You can use mpi4py over several machines though.

Massimiliano

In data venerd? 26 febbraio 2016 14:54:33, Tim De Coster ha scritto:

Hi all,

I am stuck with a problem regarding ParaView (version 4.0.1 64-bit), running 
on Ubuntu 14.04. I have written a python driver script that calls for a script 
that is executed with pvpython. I need to do this about 100.000 times. I have 
thus written a loop around the call to pvpython to execute things. It seems 
however that I execute one process at a time, after which paraview closes 
(which I want) and then the next process is called. The processes I am running 
are however not super intensive, so it should be possible to run 10 to 100 of 
them at the same time in parallel. I don't seem to find how I can do this. Is 
there anybody who can provide me with an idea how to do this?


With kind regards,

Tim



Example script of what I have at the moment:

import subprocess
import numpy as np
import shutil

def main():

    for-loop generating filenames
           print 'We are at', filename3
           subprocess.call(['/usr/bin/pvpython', 'MakeMovie.py', '-f', 
filename3])
           shutil.rmtree('./{0}'.format(filename3))

if __name__ == '__main__':
    main()



From antech777 at gmail.com  Mon Feb 29 00:47:22 2016
From: antech777 at gmail.com (Andrew)
Date: Mon, 29 Feb 2016 08:47:22 +0300
Subject: [Paraview] ParaView 5.0.0 for Windows x64 fails to open EnSight
 Gold files
In-Reply-To: <56D07DC6.5050006@bresnan.net>
References: <CANMVBVx3v8Eej1_s9Wzv6DAQdeQXs9kVe0Oxvf4Fvty0fAtQhA@mail.gmail.com>
 <56D07DC6.5050006@bresnan.net>
Message-ID: <CANMVBVyiSBxv7sSw_ArREm+RXaeYoQdiy+BEZB2WjNL=F-Vz6w@mail.gmail.com>

Hello. Sorry for silence, I'm usually offline on holydays, although I have
internet connection and read your mail.

Samuel Key

Thanks for your attention.

About transferring files from Linux to Windows. I use binary EnSight files
because CFX converter fails to write so large files in ASCII format. But I
tried to convert from CFX to EnSight (binary) on the same Win-7 x64 machine
with ParaView. Both installed versions (4.3 and 5.0) failed to open the
geometry (I unchecked all fields). ParaView 4.3 crashed, ParaView 5.0 just
cannot open file...

I think that the root cause may be a geometry file size. It is 4.9 GiB (5.3
GB), mesh have about 150 millions of cells, not 600 thusands like in your
case. Its possible that ParaView for Windows cannot process so large
EnSight files, although the Linux version reads in this geometry and
displays outline (swapping is so intensive so I cannot displaye something
else).

2016-02-26 19:31 GMT+03:00 Samuel Key <samuelkey at bresnan.net>:

> Andrew,
>
> For what it is worth, I use ParaView
> (ParaView-5.0.0-Qt4-OpenGL2-Windows-64bit) on Windows-7 64bit. I just now
> tested two medium-sized, EnSight Gold-formatted simulation results files
> (600,000 finite elements) and both worked.
>
> In the past, I have had difficulty with the EnSight ASCII-formatted *.case
> file when moving the simulation results (*.case file and friends) from MS
> Windows to EnSight running on a linux platform. It was necessary to pass
> the ASCII *.case file through a 'dos2unix' filter. Transferring files the
> other way might have the same problem???
>
> Hope this helps.
>
> Samuel Key
> FMA Development, LLC
> 1005 39th Ave NE
> Great Falls, Montana 59404
> USA
>
> On 2/25/2016 11:26 PM, Andrew wrote:
>
> Hello. We use Ansys CFX in our work but the standard post-processor
> CFD-Post consumes one of Ansys licenses while Paraview is free. So I often
> make pictures for reports with ParaView to preserve Ansys license for
> another users/needs (because other users are not familiar with ParaView and
> CFD-Post may consume general "acfd" license feature that may be used for
> calculations). I convert CFX results to EnSight Gold format in CFX Solver
> Manager (Export Results) and then open in ParaView. It was working well on
> Linux (CentOS 6.7 x64, Ubuntu 12.04 x64 with updates) but now I work with
> large files and I need to use another machine that has 128 GB of RAM and
> runs Windows-7 x64.
> I downloaded and installed the following version:
> ParaView-5.0.0-Qt4-OpenGL2-Windows-64bit.exe
> When I open my EnSight-format file I receive the error message that
> geometry file cannot be read. I tried to move EnSight files to a simple
> location (D:\Temp) and renamed them (test.case, test.geom + edited the case
> to change geometry file name to "simple" one). The same result, it cannot
> find geometry file... Full error message is as follows:
>
> ERROR: In
> C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightGoldBinaryReader.cxx,
> line 114
> vtkEnSightGoldBinaryReader (0000000009451230): stat failed.
>
>
> ERROR: In
> C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightGoldBinaryReader.cxx,
> line 220
> vtkEnSightGoldBinaryReader (0000000009451230): Unable to open file:
> D:\Storage\Media\Work\Gradirni\CFX\EnSight\C-G002L3S-R020-S000-14.5\/C-G002L3S-R020-S000.geom
>
>
> ERROR: In
> C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightReader.cxx, line
> 306
> vtkEnSightGoldBinaryReader (0000000009451230): error reading geometry file
>
>
> ERROR: In
> C:\bbd\df0abce0\source-paraview\VTK\Common\ExecutionModel\vtkExecutive.cxx,
> line 784
> vtkCompositeDataPipeline (0000000008E1A640): Algorithm
> vtkEnSightGoldBinaryReader(0000000009451230) returned failure for request:
> vtkInformation (00000000093C3920)
>   Debug: Off
>   Modified Time: 214873
>   Reference Count: 1
>   Registered Events: (none)
>   Request: REQUEST_DATA
>   ALGORITHM_AFTER_FORWARD: 1
>   FORWARD_DIRECTION: 0
>   FROM_OUTPUT_PORT: 0
>
> OK, I tried to open it in ParaView 4.3. It says nothing (only border of
> the message window appears) and crashes. At that moment I see in the status
> bar that EnSight reader progress is 100%.
>
> Both ParaView 5.0.0 and 4.3 was tested with EnSight files exported on
> Linux and Windows machine. It didn't help.
>
> OK, I tried to export CFX results to CGNS format. ParaView 5.0.0 (without
> MPI) cannot read it, so I fed it to ParaView 4.3. It says that its "unable
> to filed any meshes".
>
> I also performed an experiment on my Linux laptop. It has only 16 GB of
> RAM so its unreal to work with such a big file on this machine but it reads
> the same EnSight case and displays the domain! No arrays selected (mesh
> only), swap file grows up to 8 GB but the file opens without errors and
> crashes. It's only a test because I have not any Linux machine with memory
> large enough (our Linux cluster has 128 GB of RAM on every node including
> master but it has very poor video).
>
> I switched to CFD Post for this case but I want to know are there any
> workarounds to open my EnSight-format results in ParaView for Windows.
>
> Thanks for your attention.
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:http://public.kitware.com/mailman/listinfo/paraview
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From antech777 at gmail.com  Mon Feb 29 01:00:50 2016
From: antech777 at gmail.com (Andrew)
Date: Mon, 29 Feb 2016 09:00:50 +0300
Subject: [Paraview] ParaView 5.0.0 for Windows x64 fails to open EnSight
 Gold files
In-Reply-To: <CANMVBVyiSBxv7sSw_ArREm+RXaeYoQdiy+BEZB2WjNL=F-Vz6w@mail.gmail.com>
References: <CANMVBVx3v8Eej1_s9Wzv6DAQdeQXs9kVe0Oxvf4Fvty0fAtQhA@mail.gmail.com>
 <56D07DC6.5050006@bresnan.net>
 <CANMVBVyiSBxv7sSw_ArREm+RXaeYoQdiy+BEZB2WjNL=F-Vz6w@mail.gmail.com>
Message-ID: <CANMVBVyNLMuXH4+jLmOqkwKCPraGRtp70EW-ULtVifUMb25Q-A@mail.gmail.com>

I performed another test with *EnSight 6* (not Gold) format. Conversion was
made on Win-7 x64 machine. The same results: PV 4.3 crashed, PV 5.0 "cannot
stat" (full error message is in my first post on this topic). Sorry, now I
need to work on with my report...




2016-02-29 8:47 GMT+03:00 Andrew <antech777 at gmail.com>:

> Hello. Sorry for silence, I'm usually offline on holydays, although I have
> internet connection and read your mail.
>
> Samuel Key
>
> Thanks for your attention.
>
> About transferring files from Linux to Windows. I use binary EnSight files
> because CFX converter fails to write so large files in ASCII format. But I
> tried to convert from CFX to EnSight (binary) on the same Win-7 x64 machine
> with ParaView. Both installed versions (4.3 and 5.0) failed to open the
> geometry (I unchecked all fields). ParaView 4.3 crashed, ParaView 5.0 just
> cannot open file...
>
> I think that the root cause may be a geometry file size. It is 4.9 GiB
> (5.3 GB), mesh have about 150 millions of cells, not 600 thusands like in
> your case. Its possible that ParaView for Windows cannot process so large
> EnSight files, although the Linux version reads in this geometry and
> displays outline (swapping is so intensive so I cannot displaye something
> else).
>
> 2016-02-26 19:31 GMT+03:00 Samuel Key <samuelkey at bresnan.net>:
>
>> Andrew,
>>
>> For what it is worth, I use ParaView
>> (ParaView-5.0.0-Qt4-OpenGL2-Windows-64bit) on Windows-7 64bit. I just now
>> tested two medium-sized, EnSight Gold-formatted simulation results files
>> (600,000 finite elements) and both worked.
>>
>> In the past, I have had difficulty with the EnSight ASCII-formatted
>> *.case file when moving the simulation results (*.case file and friends)
>> from MS Windows to EnSight running on a linux platform. It was necessary to
>> pass the ASCII *.case file through a 'dos2unix' filter. Transferring files
>> the other way might have the same problem???
>>
>> Hope this helps.
>>
>> Samuel Key
>> FMA Development, LLC
>> 1005 39th Ave NE
>> Great Falls, Montana 59404
>> USA
>>
>> On 2/25/2016 11:26 PM, Andrew wrote:
>>
>> Hello. We use Ansys CFX in our work but the standard post-processor
>> CFD-Post consumes one of Ansys licenses while Paraview is free. So I often
>> make pictures for reports with ParaView to preserve Ansys license for
>> another users/needs (because other users are not familiar with ParaView and
>> CFD-Post may consume general "acfd" license feature that may be used for
>> calculations). I convert CFX results to EnSight Gold format in CFX Solver
>> Manager (Export Results) and then open in ParaView. It was working well on
>> Linux (CentOS 6.7 x64, Ubuntu 12.04 x64 with updates) but now I work with
>> large files and I need to use another machine that has 128 GB of RAM and
>> runs Windows-7 x64.
>> I downloaded and installed the following version:
>> ParaView-5.0.0-Qt4-OpenGL2-Windows-64bit.exe
>> When I open my EnSight-format file I receive the error message that
>> geometry file cannot be read. I tried to move EnSight files to a simple
>> location (D:\Temp) and renamed them (test.case, test.geom + edited the case
>> to change geometry file name to "simple" one). The same result, it cannot
>> find geometry file... Full error message is as follows:
>>
>> ERROR: In
>> C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightGoldBinaryReader.cxx,
>> line 114
>> vtkEnSightGoldBinaryReader (0000000009451230): stat failed.
>>
>>
>> ERROR: In
>> C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightGoldBinaryReader.cxx,
>> line 220
>> vtkEnSightGoldBinaryReader (0000000009451230): Unable to open file:
>> D:\Storage\Media\Work\Gradirni\CFX\EnSight\C-G002L3S-R020-S000-14.5\/C-G002L3S-R020-S000.geom
>>
>>
>> ERROR: In
>> C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightReader.cxx, line
>> 306
>> vtkEnSightGoldBinaryReader (0000000009451230): error reading geometry
>> file
>>
>>
>> ERROR: In
>> C:\bbd\df0abce0\source-paraview\VTK\Common\ExecutionModel\vtkExecutive.cxx,
>> line 784
>> vtkCompositeDataPipeline (0000000008E1A640): Algorithm
>> vtkEnSightGoldBinaryReader(0000000009451230) returned failure for request:
>> vtkInformation (00000000093C3920)
>>   Debug: Off
>>   Modified Time: 214873
>>   Reference Count: 1
>>   Registered Events: (none)
>>   Request: REQUEST_DATA
>>   ALGORITHM_AFTER_FORWARD: 1
>>   FORWARD_DIRECTION: 0
>>   FROM_OUTPUT_PORT: 0
>>
>> OK, I tried to open it in ParaView 4.3. It says nothing (only border of
>> the message window appears) and crashes. At that moment I see in the status
>> bar that EnSight reader progress is 100%.
>>
>> Both ParaView 5.0.0 and 4.3 was tested with EnSight files exported on
>> Linux and Windows machine. It didn't help.
>>
>> OK, I tried to export CFX results to CGNS format. ParaView 5.0.0 (without
>> MPI) cannot read it, so I fed it to ParaView 4.3. It says that its "unable
>> to filed any meshes".
>>
>> I also performed an experiment on my Linux laptop. It has only 16 GB of
>> RAM so its unreal to work with such a big file on this machine but it reads
>> the same EnSight case and displays the domain! No arrays selected (mesh
>> only), swap file grows up to 8 GB but the file opens without errors and
>> crashes. It's only a test because I have not any Linux machine with memory
>> large enough (our Linux cluster has 128 GB of RAM on every node including
>> master but it has very poor video).
>>
>> I switched to CFD Post for this case but I want to know are there any
>> workarounds to open my EnSight-format results in ParaView for Windows.
>>
>> Thanks for your attention.
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>
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From antech777 at gmail.com  Mon Feb 29 03:04:36 2016
From: antech777 at gmail.com (Andrew)
Date: Mon, 29 Feb 2016 11:04:36 +0300
Subject: [Paraview] ParaView 5.0.0 for Windows x64 fails to open EnSight
 Gold files
In-Reply-To: <CANMVBVyNLMuXH4+jLmOqkwKCPraGRtp70EW-ULtVifUMb25Q-A@mail.gmail.com>
References: <CANMVBVx3v8Eej1_s9Wzv6DAQdeQXs9kVe0Oxvf4Fvty0fAtQhA@mail.gmail.com>
 <56D07DC6.5050006@bresnan.net>
 <CANMVBVyiSBxv7sSw_ArREm+RXaeYoQdiy+BEZB2WjNL=F-Vz6w@mail.gmail.com>
 <CANMVBVyNLMuXH4+jLmOqkwKCPraGRtp70EW-ULtVifUMb25Q-A@mail.gmail.com>
Message-ID: <CANMVBVx=6ey+FqAc53wc47S2ph42=3k-YaR+Hos=9kxa_=nZow@mail.gmail.com>

Another "experimental data". I was able to load this big case in ParaView
viat the CGNS format. It was neccesary to select CGNS 3.0 and HDF5 options
in CFX Converter. But when I apply the Extract Block filter I see no any
boundaries, only fluid domain (that is displayed OK). So CGNS format is not
a wayout...

2016-02-29 9:00 GMT+03:00 Andrew <antech777 at gmail.com>:

> I performed another test with *EnSight 6* (not Gold) format. Conversion
> was made on Win-7 x64 machine. The same results: PV 4.3 crashed, PV 5.0
> "cannot stat" (full error message is in my first post on this topic).
> Sorry, now I need to work on with my report...
>
>
>
>
>
> 2016-02-29 8:47 GMT+03:00 Andrew <antech777 at gmail.com>:
>
>> Hello. Sorry for silence, I'm usually offline on holydays, although I
>> have internet connection and read your mail.
>>
>> Samuel Key
>>
>> Thanks for your attention.
>>
>> About transferring files from Linux to Windows. I use binary EnSight
>> files because CFX converter fails to write so large files in ASCII format.
>> But I tried to convert from CFX to EnSight (binary) on the same Win-7 x64
>> machine with ParaView. Both installed versions (4.3 and 5.0) failed to open
>> the geometry (I unchecked all fields). ParaView 4.3 crashed, ParaView 5.0
>> just cannot open file...
>>
>> I think that the root cause may be a geometry file size. It is 4.9 GiB
>> (5.3 GB), mesh have about 150 millions of cells, not 600 thusands like in
>> your case. Its possible that ParaView for Windows cannot process so large
>> EnSight files, although the Linux version reads in this geometry and
>> displays outline (swapping is so intensive so I cannot displaye something
>> else).
>>
>> 2016-02-26 19:31 GMT+03:00 Samuel Key <samuelkey at bresnan.net>:
>>
>>> Andrew,
>>>
>>> For what it is worth, I use ParaView
>>> (ParaView-5.0.0-Qt4-OpenGL2-Windows-64bit) on Windows-7 64bit. I just now
>>> tested two medium-sized, EnSight Gold-formatted simulation results files
>>> (600,000 finite elements) and both worked.
>>>
>>> In the past, I have had difficulty with the EnSight ASCII-formatted
>>> *.case file when moving the simulation results (*.case file and friends)
>>> from MS Windows to EnSight running on a linux platform. It was necessary to
>>> pass the ASCII *.case file through a 'dos2unix' filter. Transferring files
>>> the other way might have the same problem???
>>>
>>> Hope this helps.
>>>
>>> Samuel Key
>>> FMA Development, LLC
>>> 1005 39th Ave NE
>>> Great Falls, Montana 59404
>>> USA
>>>
>>> On 2/25/2016 11:26 PM, Andrew wrote:
>>>
>>> Hello. We use Ansys CFX in our work but the standard post-processor
>>> CFD-Post consumes one of Ansys licenses while Paraview is free. So I often
>>> make pictures for reports with ParaView to preserve Ansys license for
>>> another users/needs (because other users are not familiar with ParaView and
>>> CFD-Post may consume general "acfd" license feature that may be used for
>>> calculations). I convert CFX results to EnSight Gold format in CFX Solver
>>> Manager (Export Results) and then open in ParaView. It was working well on
>>> Linux (CentOS 6.7 x64, Ubuntu 12.04 x64 with updates) but now I work with
>>> large files and I need to use another machine that has 128 GB of RAM and
>>> runs Windows-7 x64.
>>> I downloaded and installed the following version:
>>> ParaView-5.0.0-Qt4-OpenGL2-Windows-64bit.exe
>>> When I open my EnSight-format file I receive the error message that
>>> geometry file cannot be read. I tried to move EnSight files to a simple
>>> location (D:\Temp) and renamed them (test.case, test.geom + edited the case
>>> to change geometry file name to "simple" one). The same result, it cannot
>>> find geometry file... Full error message is as follows:
>>>
>>> ERROR: In
>>> C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightGoldBinaryReader.cxx,
>>> line 114
>>> vtkEnSightGoldBinaryReader (0000000009451230): stat failed.
>>>
>>>
>>> ERROR: In
>>> C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightGoldBinaryReader.cxx,
>>> line 220
>>> vtkEnSightGoldBinaryReader (0000000009451230): Unable to open file:
>>> D:\Storage\Media\Work\Gradirni\CFX\EnSight\C-G002L3S-R020-S000-14.5\/C-G002L3S-R020-S000.geom
>>>
>>>
>>> ERROR: In
>>> C:\bbd\df0abce0\source-paraview\VTK\IO\EnSight\vtkEnSightReader.cxx, line
>>> 306
>>> vtkEnSightGoldBinaryReader (0000000009451230): error reading geometry
>>> file
>>>
>>>
>>> ERROR: In
>>> C:\bbd\df0abce0\source-paraview\VTK\Common\ExecutionModel\vtkExecutive.cxx,
>>> line 784
>>> vtkCompositeDataPipeline (0000000008E1A640): Algorithm
>>> vtkEnSightGoldBinaryReader(0000000009451230) returned failure for request:
>>> vtkInformation (00000000093C3920)
>>>   Debug: Off
>>>   Modified Time: 214873
>>>   Reference Count: 1
>>>   Registered Events: (none)
>>>   Request: REQUEST_DATA
>>>   ALGORITHM_AFTER_FORWARD: 1
>>>   FORWARD_DIRECTION: 0
>>>   FROM_OUTPUT_PORT: 0
>>>
>>> OK, I tried to open it in ParaView 4.3. It says nothing (only border of
>>> the message window appears) and crashes. At that moment I see in the status
>>> bar that EnSight reader progress is 100%.
>>>
>>> Both ParaView 5.0.0 and 4.3 was tested with EnSight files exported on
>>> Linux and Windows machine. It didn't help.
>>>
>>> OK, I tried to export CFX results to CGNS format. ParaView 5.0.0
>>> (without MPI) cannot read it, so I fed it to ParaView 4.3. It says that its
>>> "unable to filed any meshes".
>>>
>>> I also performed an experiment on my Linux laptop. It has only 16 GB of
>>> RAM so its unreal to work with such a big file on this machine but it reads
>>> the same EnSight case and displays the domain! No arrays selected (mesh
>>> only), swap file grows up to 8 GB but the file opens without errors and
>>> crashes. It's only a test because I have not any Linux machine with memory
>>> large enough (our Linux cluster has 128 GB of RAM on every node including
>>> master but it has very poor video).
>>>
>>> I switched to CFD Post for this case but I want to know are there any
>>> workarounds to open my EnSight-format results in ParaView for Windows.
>>>
>>> Thanks for your attention.
>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:http://public.kitware.com/mailman/listinfo/paraview
>>>
>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://public.kitware.com/mailman/listinfo/paraview
>>>
>>>
>>
>
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From david.lonie at kitware.com  Mon Feb 29 10:50:02 2016
From: david.lonie at kitware.com (David Lonie)
Date: Mon, 29 Feb 2016 10:50:02 -0500
Subject: [Paraview] Paraview 5.0.0 pdf, eps, svg export
In-Reply-To: <DBEF383764FCE7428354CFA9A0591A86016690169E@eonblitz16.eonerc.rwth-aachen.de>
References: <DBEF383764FCE7428354CFA9A0591A8601668FE436@eonblitz16.eonerc.rwth-aachen.de>
 <CACJ=gTjuhEQ7-4TSZ-bM630brg_PDhdBoW0txRRmapoeWvxTjQ@mail.gmail.com>
 <DBEF383764FCE7428354CFA9A0591A86016690169E@eonblitz16.eonerc.rwth-aachen.de>
Message-ID: <CA+=e1ovxhgJmkux41u4f6zswPbZ=njdvdYA8rfqGyYsuuWMrmw@mail.gmail.com>

Just to chime in, a new vector graphics backend is implemented for OpenGL2
and should be available in the new release. It's functionality is limited
compared to the old one (most things are just rasterized to the image
background with vectorized text, etc overlayed), but it will produce output
of the proper format.

Cheers,
Dave

On Wed, Feb 24, 2016 at 4:38 AM, Buesing, Henrik <
HBuesing at eonerc.rwth-aachen.de> wrote:

> Dear Joachim,
>
>
>
> I will use Paraview 4.4 then. Thank you!
>
> Henrik
>
>
>
>
>
> *Von:* Joachim Pouderoux [mailto:joachim.pouderoux at kitware.com]
> *Gesendet:* 24 February 2016 10:13
> *An:* Buesing, Henrik
> *Cc:* paraview at paraview.org
> *Betreff:* Re: [Paraview] Paraview 5.0.0 pdf, eps, svg export
>
>
>
> Henrik,
>
> As you might know, distributed binaries for ParaView 5.0.0 are based on
> the new VTK 'OpenGL2' rendering backend which provides better rendering
> efficiency. However, the VTK module for exporting visualization to a PDF or
> PS file is highly dependent on the rendering engine... and the adaptation
> of this module this new rendering backend is still in progress.
>
> To enable this feature again you will have to compile ParaView 5.0 with
> the legacy OpenGL(1) rendering backend, or use a previous version of the
> software (4.4).
>
> Best,
>
>
> *Joachim Pouderoux*
>
> *PhD, Technical Expert*
> *Kitware SAS <http://www.kitware.fr>*
>
>
>
> 2016-02-24 9:36 GMT+01:00 Buesing, Henrik <HBuesing at eonerc.rwth-aachen.de
> >:
>
> Dear all,
>
>
>
> I?m trying out Paraview 5.0.0. I would like to export vector graphics. In
> Paraview 4.3.1 I had ?Export Scene? and could export pdf, ps, eps, svg etc.
> Now I only have pov, vrml, webgl, x3d, x3db (which say nothing to me). So
> how do I get my pdf, eps or svg?
>
> Thank you!
>
> Henrik
>
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>
>
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From andy.john.parker at googlemail.com  Mon Feb 29 11:03:46 2016
From: andy.john.parker at googlemail.com (Andrew Parker)
Date: Mon, 29 Feb 2016 16:03:46 +0000
Subject: [Paraview] Paraview bug found in pvtu files containing polyhedrons
Message-ID: <45EAF588-0B4F-45B9-B4AB-F1EC8EC656FF@googlemail.com>

Dear All,

I have recently been having problems reading pvtu files in paraview when those files contain arbitrary polyhedrons: this is from the output of a large scale code that runs in parallel via mpi.  To show the problem, I have written a very small sample code, attached, that runs in serial but reproduces the salient issues experienced by my larger code when run in parallel.  It is clear, via the toggling a boolean, that the problem happens when vtk_polyhedrons types are used.  There is a short description at the top of the bug.cxx file, followed by instructions.  I use stock versions of paraview here, although self compiled ones show no difference.

In short compile the code, run it, and open the pvtu file in paraview.  You should see 4 cells.
Switch the ?bug? bool to true, recompile, re-run it, and reopen the pvtu file.  The screen will be blank.  

The only difference is that cells are added to the unstructured grid explicitly as vtk_polyhedrons using a face-stream, rather than as hexs.  I cannot do this in the real code!  The rest of the code is just there to produce the ?serial? mesh, and threshold this mesh to produce two ?parallel-partition? meshes.  I use the new ghost type framework as this is consistent with the real code, and this runs and compiles on OS X and gcc.  Likewise it has been build against vtk 6.3 and the bug manifests itself in paraview 4.4 and 5.0.  Visit 2.10 does not have this bug and can correctly open the pvtu containing polyhedrons: this is my current workaround.

Can any of the developers shed light on this?  Is a fix known, if so when will it be released?  Do others have this problem [1, 2, 3] outside of those long reported? Does anyone else have workarounds?

Any help really appreciated, 
Andy

[1] http://public.kitware.com/pipermail/vtkusers/2015-May/090835.html
[2] https://cmake.org/pipermail/paraview/2012-October/026456.html
[3] https://cmake.org/pipermail/paraview/2015-January/032950.html

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From samuelkey at bresnan.net  Mon Feb 29 12:27:16 2016
From: samuelkey at bresnan.net (Samuel Key)
Date: Mon, 29 Feb 2016 10:27:16 -0700
Subject: [Paraview] ParaView 5.0.0 for Windows x64 fails to open EnSight
 Gold files
In-Reply-To: <CANMVBVx=6ey+FqAc53wc47S2ph42=3k-YaR+Hos=9kxa_=nZow@mail.gmail.com>
References: <CANMVBVx3v8Eej1_s9Wzv6DAQdeQXs9kVe0Oxvf4Fvty0fAtQhA@mail.gmail.com>
 <56D07DC6.5050006@bresnan.net>
 <CANMVBVyiSBxv7sSw_ArREm+RXaeYoQdiy+BEZB2WjNL=F-Vz6w@mail.gmail.com>
 <CANMVBVyNLMuXH4+jLmOqkwKCPraGRtp70EW-ULtVifUMb25Q-A@mail.gmail.com>
 <CANMVBVx=6ey+FqAc53wc47S2ph42=3k-YaR+Hos=9kxa_=nZow@mail.gmail.com>
Message-ID: <56D47F74.8060206@bresnan.net>

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From cory.quammen at kitware.com  Mon Feb 29 14:31:21 2016
From: cory.quammen at kitware.com (Cory Quammen)
Date: Mon, 29 Feb 2016 13:31:21 -0600
Subject: [Paraview] GetNumberOfArraysEnabled()' failed
In-Reply-To: <2FB62305-5C3B-458C-A1AD-E96C16C04580@gmail.com>
References: <2FB62305-5C3B-458C-A1AD-E96C16C04580@gmail.com>
Message-ID: <CAB5Fpx5OdPDJSuBW=t=U9x0aN4XaZezbMr+Y+tBDWf3DB59qhg@mail.gmail.com>

So you are saying that it doesn't work in ParaView 4.2 but it does in 5.0?
Likely a bug that was fixed. Can you just use 5.0?

Thanks,
Cory

On Sat, Feb 27, 2016 at 3:19 AM, Feng Xing <snakexf at gmail.com> wrote:

> Hello everyone,
>
> When I open a .pvtu (XML) file from Paraview 4.2, I occur a
> "GetNumberOfArraysEnabled() failed error".
>
>     paraview:
> /softs/ARCHIVES/ParaView-v4.2.0-source/VTK/IO/XML/vtkXMLDataReader.cxx:317:
>     virtual void vtkXMLDataReader::SetupOutputData(): Assertion
> `this->NumberOfCellArrays ==
>     this-   >CellDataArraySelection->GetNumberOfArraysEnabled()? failed;
> Aborted
>
> However, it seems ok for Paraview 5.0, I would like to ask if it is a bug
> in the old version or vtk has changed something?
>
> Thank you very much,
>
> Feng Xing
> Postdoc Inria, France
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Search the list archives at: http://markmail.org/search/?q=ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview
>



-- 
Cory Quammen
R&D Engineer
Kitware, Inc.
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From snakexf at gmail.com  Mon Feb 29 15:20:12 2016
From: snakexf at gmail.com (Feng Xing)
Date: Mon, 29 Feb 2016 21:20:12 +0100
Subject: [Paraview] GetNumberOfArraysEnabled()' failed
In-Reply-To: <CAB5Fpx5OdPDJSuBW=t=U9x0aN4XaZezbMr+Y+tBDWf3DB59qhg@mail.gmail.com>
References: <2FB62305-5C3B-458C-A1AD-E96C16C04580@gmail.com>
 <CAB5Fpx5OdPDJSuBW=t=U9x0aN4XaZezbMr+Y+tBDWf3DB59qhg@mail.gmail.com>
Message-ID: <890F112B-130C-4A56-9C70-E93F259F158E@gmail.com>

Thank you for replying. I understand. The probl?me doesn?t existe in 5.0. :-)

Regards,
Feng



> On 29 Feb 2016, at 20:31, Cory Quammen <cory.quammen at kitware.com> wrote:
> 
> So you are saying that it doesn't work in ParaView 4.2 but it does in 5.0? Likely a bug that was fixed. Can you just use 5.0?
> 
> Thanks,
> Cory
> 
> On Sat, Feb 27, 2016 at 3:19 AM, Feng Xing <snakexf at gmail.com <mailto:snakexf at gmail.com>> wrote:
> Hello everyone,
> 
> When I open a .pvtu (XML) file from Paraview 4.2, I occur a "GetNumberOfArraysEnabled() failed error".
> 
>     paraview: /softs/ARCHIVES/ParaView-v4.2.0-source/VTK/IO/XML/vtkXMLDataReader.cxx:317:
>     virtual void vtkXMLDataReader::SetupOutputData(): Assertion `this->NumberOfCellArrays ==
>     this-   >CellDataArraySelection->GetNumberOfArraysEnabled()? failed; Aborted
> 
> However, it seems ok for Paraview 5.0, I would like to ask if it is a bug in the old version or vtk has changed something?
> 
> Thank you very much,
> 
> Feng Xing
> Postdoc Inria, France
> _______________________________________________
> Powered by www.kitware.com <http://www.kitware.com/>
> 
> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html <http://www.kitware.com/opensource/opensource.html>
> 
> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView <http://paraview.org/Wiki/ParaView>
> 
> Search the list archives at: http://markmail.org/search/?q=ParaView <http://markmail.org/search/?q=ParaView>
> 
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/paraview <http://public.kitware.com/mailman/listinfo/paraview>
> 
> 
> 
> -- 
> Cory Quammen
> R&D Engineer
> Kitware, Inc.

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From utkarsh.ayachit at kitware.com  Mon Feb 29 16:34:44 2016
From: utkarsh.ayachit at kitware.com (Utkarsh Ayachit)
Date: Mon, 29 Feb 2016 16:34:44 -0500
Subject: [Paraview] ANN: ParaView 5.0.1 available for download
Message-ID: <CADHSJjDEP-Bm4drYkYQFaiUh4yA+ZCB2tTLrpLMH6+cpM85tzA@mail.gmail.com>

Folks,

ParaView 5.0.1-RC1 is now available for download[1]. For fixes that
went into this release, refer to the change log on bug tracker [2].

- The ParaView team

[1] http://www.paraview.org/download/
[2] http://www.paraview.org/Bug/changelog_page.php

From neilsrini at gmail.com  Thu Feb  4 09:04:27 2016
From: neilsrini at gmail.com (Neil Srinivasan)
Date: Thu, 04 Feb 2016 14:04:27 -0000
Subject: [Paraview] how to draw a mesh in preview
Message-ID: <3B648009-2AE9-4578-9191-FFA3C2764E05@gmail.com>

Hi I am new to Paraview

Can you help

I have data in a CSV spreadsheet. 


It contains the xyz point coordinates of a 3D shape (20,000+ nodes). 

The file also contains the triangulation coordinates in 3 separate columns for these nodes (40000 + triangulations). These create the faces of the mesh

I can work out how to plot the points, using 

Filter?Table to points. 


How do I plot the faces?
Do the 3 columns need to be turned into an array?


And how do I colour the faces or contour them by another value (called "bi" in the spreadsheet)



here is an example of the spreadsheet

nn = node number

the 3d coordinates of the points are x, y, z

and the faces of the mesh are specified by (XYZ)

I WISH TO PLOT Points (x, y, x) , draw faces (XYZ) colour by ?bi"



in matlab

it would be


trisurf(Tri,X,Y,Z,C) 


where Tri = array(XYX)

X,Y,Z = (x, y, z)

c= "bi"




nn	x	y	z	X	Y	Z	uni	bi
0	39.527	28.202	160.219	3435	19658	2764	3.86942	0.74871
1	70.804	-2.966	157.578	3161	17204	9466	6.64361	0.78373
2	48.982	-25.674	109.022	18424	17467	16955	5.02491	1.0451
3	83.514	-9.096	120.988	13600	19721	2669	4.47977	0.9348
4	-16.04	-39.749	188.467	1564	10099	10091	1.90873	0.73286
5	74.526	-3.096	174.347	21598	19018	21205	8.4263	0.70594
6	54.93	-56.347	151.496	21283	11341	18399	7.53334	2.17128
7	56.936	-20.131	186.177	1171	2723	20833	7.16118	1.44875
8	-14.627	-47.1	162.185	51	15729	15865	2.13939	0.70887
9	38.207	-59.201	147.993	9331	5851	9106	5.83457	4.32971
10	50.645	-32.04	110.418	310	3513	9121	5.3741	1.14543
11	-23.211	-45.574	169.801	5651	11928	15468	2.17971	0.7946
12	41.039	-1.632	98.52	8594	2295	6852	4.26649	0.79615
13	82.404	-49.126	166.003	22725	22636	11114	8.84955	1.42203
14	48.699	-40.492	114.587	10125	19834	12407	6.07067	1.32379
15	62.701	-26.713	118.139	17118	17033	17032	5.93996	0.86464
16	91.012	-53.075	160.585	9337	4708	9629	8.99875	1.35447
17	-31.33	-37.297	167.414	14194	6424	14676	2.25863	0.70738
18	51.855	-55.513	156.995	17847	12664	5551	6.05014	2.60571
19	53.576	30.955	135.944	11280	7505	1096	2.35243	0.18721
20	47.349	-57.486	138.033	7771	2097	12062	7.52434	2.09593
21	43.745	-64.659	169.996	21002	20991	20968	4.09401	3.32012
22	87.947	-17.886	136.023	4079	17232	17277	5.04302	1.021
23	51.98	-55.547	149.716	7818	14661	12568	7.00004	2.74291
24	-33.15	-13.024	181.406	15275	2482	1629	2.27942	0.78752
25	45.396	12.158	171.215	5385	4419	3770	7.29062	1.6148
26	68.496	-31.64	113.732	15189	3014	16245	6.12934	0.97359
27	-10.444	-36.881	190.536	1367	9941	10848	2.32989	0.88676
28	56.327	19.243	175.184	10472	10933	1752	6.05578	0.65753
29	-40.631	-0.466	178.982	299	9399	504	1.30917	0.63564
30	-2.748	-47.449	184.5	14970	2932	3326	2.34845	0.49878
31	62.302	-14.766	118.75	13457	13188	13382	4.7033	0.67427
32	5.523	-35.14	191.678	18076	1703	1682	3.49899	0.62167
33	5.33	-44.6	131.367	120	15103	17016	3.77715	1.13597
34	3.152	-58.828	182.063	16495	1360	7877	2.58493	0.80157
35	61.128	1.303	169.774	18622	4365	18380	7.49219	1.00925
36	11.38	-58.657	195.479	2268	3655	97	3.19083	1.16885
37	-36.043	-20.282	190.743	17439	17371	17425	1.3224	0.6996
38	77.899	-60.756	181.677	12696	18067	18124	8.14331	2.17163
39	9.342	34.562	172.545	17888	17878	8082	3.9909	1.80517
40	76.321	-59.645	152.584	20116	20039	19968	9.4862	1.08717
41	96.423	-31.596	142.645	8821	11253	6633	7.33943	0.8511
42	52.793	-46.894	189.635	14249	2694	4195	5.50591	0.92305
43	70.994	-1.079	175.54	16937	16784	16365	8.42919	0.74369
44	59.003	-25.981	105.225	16968	5465	5245	5.70543	0.81652
45	-21.102	-1.702	184.218	4071	4922	12475	2.31215	0.9418
46	55.737	-1.277	99.638	10310	10291	10297	4.39256	0.87788
47	16.667	-55.733	157.427	7270	11418	14121	4.95189	1.43057
48	19.226	24.252	162.77	1860	4286	19594	5.31093	2.35209
49	-17.991	-55.44	178.346	14657	103	14969	2.22407	0.3757
50	58.981	-7.466	117.162	11663	11777	639	4.84544	0.81175
51	55.258	-37.669	188.82	7721	22165	22201	6.29766	0.85569
52	51.683	-22.327	99.758	2065	5148	6028	5.33887	0.95487
53	-13.163	-50.711	169.6	9941	11269	10848	1.98573	0.7207
54	-39.29	-2.612	177.815	9192	14744	14772	1.41494	0.64676
55	42.777	17.437	123.449	22319	22229	22313	2.72004	0.70116
56	38.474	15.313	125.221	6643	123	5100	2.69387	0.78511
57	72.277	-23.711	168.732	7210	13096	16956	7.79873	1.09656
58	20.053	-59.792	150.766	16736	11926	12347	6.14475	2.83339
59	-20.891	-54.209	185.066	4511	5914	15101	2.09185	0.35595
60	60.952	-40.205	188.401	5067	17301	17263	6.63958	0.9144
61	34.117	16.632	130.778	9725	5706	3250	2.47319	0.51642
62	-22.583	-54.076	166.527	13204	13128	13163	2.08993	0.42557
63	20.927	14.122	186.825	1572	11284	12648	2.4621	2.42555
64	-33.384	-38.79	178.261	12361	8344	21267	1.58919	0.60828
65	-21.964	-22.176	195.618	22598	22515	16286	2.02373	0.55853
66	75.876	-3.193	113.247	980	11106	11163	4.1064	0.77006
67	58.212	-0.732	175.969	9035	8821	21131	7.5023	1.00901
68	0.79	-58.81	170.045	6077	18998	3798	2.7343	1.21082
69	30.889	32.699	147.739	11407	3271	3361	4.62332	1.03887
70	60.132	-43.701	125.878	17364	17250	1159	9.18386	1.90275
71	10.952	-62.699	173.493	15719	15787	8796	2.94152	1.72267
72	47.126	-39.12	112.037	12973	72	12605	5.87321	1.28351
73	-9.219	-20.131	191.267	2925	3435	6428	4.57292	4.38415
74	54.172	12.753	127.561	12959	20347	675	3.19857	0.6872
75	30.219	-15.514	186.75	16575	16710	16827	4.08769	2.5904
76	62.513	21.292	167.397	10200	12951	4955	5.89917	0.54786
77	44.763	5.107	101.405	13254	13206	13128	3.94028	0.66935
78	20.191	26.81	176.942	6505	14781	14760	3.01324	2.52067
79	-15.209	-21.318	191.614	1713	14957	817	3.98299	2.53282
80	85.768	-34.511	161.183	7647	14191	12722	8.21238	1.07844
81	-23.524	-39.387	159.302	6109	6108	14837	2.12111	0.62179
82	45.373	18.799	155.019	11500	11409	3687	6.44652	1.49557
83	41.25	13.31	130.306	3581	2926	5547	2.78439	0.58067
84	80.969	-17.849	151.329	7123	19604	18251	6.77879	0.72065
85	-10.704	-13.484	194.062	4688	2078	16534	2.96016	0.67797
86	-21.546	-37.614	145.617	12938	1865	12837	1.88789	0.30829
87	60.161	-5.408	102.091	21439	15913	18113	4.65922	0.84878
88	6.953	24.752	181.016	18636	18662	5011	2.93891	2.57862
89	53.75	-38.433	196.552	4092	8784	10645	4.79575	1.90689
90	-38.771	-19.449	187.648	20551	20431	20548	1.34899	0.68415
91	55.493	-27.325	112.567	1895	3286	14773	5.49107	0.95337
92	-24.342	-53.165	183.263	18148	18048	12271	2.04758	0.35847
93	52.501	13.674	159.242	1210	4961	6396	5.72103	0.94089
94	60.14	14.452	174.838	12721	6045	12634	7.08603	0.86004
95	64.133	-64.754	195.336	4435	7652	9169	5.80294	2.98035
96	42.44	21.944	142.126	7937	6130	4468	3.86752	0.64875
97	59.839	27.162	132.586	7877	5014	1085	2.38178	0.33266
98	43.39	-5.958	100.266	17929	17924	1692	4.60203	1.13191
99	13.891	-52.901	130.841	12512	9545	15270	4.29954	1.49922
100	36.806	-16.512	201.067	18284	4577	3906	5.55898	3.69629
101	58.075	-47.253	134.146	19090	19007	19005	10.3486	1.96839
102	46.398	0.098	105.646	18329	18169	18253	4.03822	0.67085
103	-17.912	-48.058	167.367	5186	10122	8094	2.10087	0.74668
104	-37.84	-19.802	188.886	20621	20519	3924	1.34437	0.67927
105	50.496	0.057	117.6	22003	21920	22002	4.1886	0.77538
106	81.441	-50.09	183.928	1019	19980	2417	10.59746	2.55608
107	-18.159	-45.612	144.105	59	11930	11911	1.95227	0.33315
108	61.384	-18.871	104.246	21178	18095	21165	5.48872	0.7678
109	50.912	15.848	154.561	2738	14287	3785	5.80614	1.02038
110	-27.01	-26.072	183.488	7864	5360	355	3.00819	0.91771
111	95.464	-44.114	152.077	8515	10308	5274	8.07103	0.83255
112	28.189	31.402	148.992	2964	19856	8573	5.56537	1.58149
113	-15.198	-33.714	196.488	8672	1456	3578	2.27997	0.49472
114	90.663	-24.931	155.339	8748	2439	12985	7.00309	0.91384
115	23.327	35.283	159.858	482	7378	5226	5.1653	1.38078
116	-37.489	-26.56	180.453	12760	21293	21275	2.71563	0.84593
117	82.337	-39.093	143.323	17198	17151	17119	9.3054	2.99483
118	-38.229	-17.754	180.106	390	10788	11132	2.57085	0.81407
119	74.934	-9.144	137.145	18353	18283	5398	4.09276	1.77548
120	1.796	-55.582	173.979	2821	17822	308	2.59432	0.95648
121	-50.901	-21.152	166.576	11347	7718	11475	1.5636	0.51735
122	77.579	-27.6	131.545	17646	13313	9507	7.26152	1.15158
123	62.319	24.576	137.331	8357	12636	8667	2.28906	0.34389
124	-15.638	-39.824	154.679	12700	9260	4345	2.01393	0.48325
125	44.905	26.956	151.665	7668	469	15915	3.10248	0.47951
126	83.347	-29.808	179.315	4478	13814	15169	5.52751	0.80966
127	47.425	-41.967	115.259	17835	17800	17785	6.39349	1.41559
128	52.453	20.258	128.26	4464	14530	482	2.68097	0.41779
129	38.209	-64.964	195.863	16557	11545	15459	3.26214	1.24885
130	21.071	16.783	177.775	2124	4447	2436	6.6407	4.97848
131	29.503	-64.462	157.111	23152	2238	22153	5.77072	5.76802
132	62.167	-18.958	105.134	6807	19849	11303	5.46422	0.73199
133	6.626	-14.038	188.224	15049	6099	6090	6.19926	2.59055
134	-18.292	-39.804	142.112	19646	19574	12920	1.8949	0.28161
135	58.067	-5.467	117.879	18758	20703	20603	4.87766	0.91224
136	58.952	-62.601	195.911	18234	6883	18150	5.65397	3.21416
137	18.451	-43.537	191.951	8143	6449	5545	4.95802	2.0711
138	78.537	3.731	168.99	14543	22535	2257	8.09634	0.71443
139	0.065	-4.453	186.477	14774	3239	14749	4.3532	1.60318
140	7.551	-59.184	172.99	9659	6407	2052	2.8661	1.41884
141	35.904	5.221	191.616	19651	3670	5342	2.75543	0.79064
142	55.492	-62.641	158.486	6016	14698	14908	6.0428	2.04161
143	-51.707	-23.366	162.721	11886	17786	22280	1.54081	0.41849
144	38.199	22.066	155.009	16484	17222	16624	7.22305	2.07787
145	59.764	-2.167	103.253	5098	7564	7346	4.51477	0.91686
146	42.767	-55.513	150.73	9809	9573	9807	6.3825	4.13087
147	29.798	-13.804	186.377	3585	14700	8287	3.67598	2.97188
148	77.063	-21.662	115.242	15109	9449	2855	5.64236	0.90502
149	52.99	11.83	139.44	6368	9095	20347	2.95492	0.52455
150	40.511	-54.77	148.262	9763	10370	1670	6.36309	3.98028
151	-49.092	-26.684	163.805	6328	4932	3205	1.56258	0.38596
152	59.971	6.571	155.524	10176	6776	10166	4.91326	0.82185
153	-24.866	-28.452	186.043	906	9810	4775	2.79098	0.95264
154	44.662	-48.676	118.845	2063	12358	10917	7.61089	1.58152
155	55.871	10.187	108.454	821	8457	178	3.33411	0.77467
156	56.263	8.075	136.497	9014	10284	8670	2.44282	0.46984
157	-18.815	-7.764	185.444	20111	7623	2362	3.01272	1.60671
158	-43.375	-12.602	175.902	8817	16588	17062	1.67179	0.6848
159	87.411	-52.38	173.786	5499	22777	22693	10.38615	2.69125
160	84.9	-12.495	132.408	1599	3995	8542	4.36721	1.80031
161	-45.47	-25.431	179.535	5762	18236	9450	1.27832	0.61841
162	3.663	-56.378	189.651	2316	2778	13336	2.6308	0.65465
163	28.746	31.93	150.032	23526	23480	23525	5.27731	1.34732
164	92.617	-45.781	160.079	16854	16185	2243	8.62868	1.21427
165	-10.411	-50.516	165.723	10179	2019	10054	2.05872	0.83639
166	-41.191	-16.528	183.301	18901	22205	22124	1.31882	0.65463
167	70.193	-25.125	175.367	4627	4075	11846	6.47076	1.3174
168	63.893	22.969	144.486	13356	20948	20880	2.75482	0.57495
169	15.677	-43.196	202.91	21828	3150	21744	5.50489	2.09489
170	80.432	-14.85	149.167	17579	10483	18068	6.26992	0.64043
171	-23.544	-52.4	176.909	7194	15829	15758	2.1411	0.36068
172	48.501	-43.479	190.572	9212	9732	3774	5.8345	1.14421
173	73.088	-25.679	125.597	7161	15947	1973	5.81738	1.14154
174	74.208	-29.189	127.185	22647	19047	5102	7.26981	1.46307
175	75.051	-17.57	111.451	17570	16961	2989	5.4035	0.85116
176	5.981	-59.854	182.614	18251	19445	19415	2.66773	1.03681
177	47.233	21.024	129.961	11185	11199	5292	2.60373	0.33581
178	72.128	-13.23	180.437	19558	19575	19501	6.26398	0.75417
179	84.048	-42.588	147.955	11959	59	11934	9.18352	1.77468
180	24.035	33.318	160.869	9969	20539	20636	4.90841	1.32855
181	16.209	-56.005	139.593	18131	18009	2561	5.98547	1.64692
182	68.684	16.413	150.994	18234	18011	18155	3.86496	0.95242
183	14.539	-46.446	141.887	10209	9999	1135	5.84617	2.99907
184	3.906	-27.25	190.856	19230	19142	19049	4.06015	0.81711
185	66.823	-64.962	194.689	16814	11512	16784	6.48876	2.07211
186	73.076	7.487	164.178	12786	17900	17893	8.26513	0.44479
187	-10.879	-51.307	162.166	7464	13313	6683	2.27142	0.69736
188	59.346	-1.14	175.448	19424	17998	13260	7.64111	1.15072
189	-49.738	-17.784	175.123	5552	5560	9188	1.38284	0.63434
190	-47.094	-17.445	178.549	5811	369	3721	1.31408	0.63302
191	-3.706	-26.805	192.052	15237	11736	15533	3.67866	1.62258
192	63.147	-44.607	133.754	10660	9238	12526	11.44737	2.27365
193	42.233	-65.805	195.815	2615	12896	12256	2.90751	1.31921
194	37.174	-71.163	189.133	15620	9965	15554	2.28842	0.63617
195	63.99	-60.857	176.089	21016	20975	20994	2.76055	0.55386
196	39.447	13.621	126.592	11084	14234	12741	2.71738	0.74074
197	63.492	-48.183	195.64	7816	1081	6978	7.98561	5.62748
198	7.937	-62	174.244	19069	9386	20309	2.80825	1.37713
199	-32.198	-19.376	191.352	5130	3521	14303	1.47061	0.75481
200	-0.821	-46.11	186.766	4962	2036	791	2.56714	0.56325
201	-15.785	-49.722	169.754	14216	14200	13004	2.01106	0.7064
202	53.443	11.732	108.767	17514	5406	5400	3.26958	0.76122
203	58.609	26.091	128.817	9924	14617	2564	2.5215	0.41332
204	62.173	-7.372	103.97	10633	5141	11815	4.81105	0.73124
205	-12.277	-44.261	194.885	396	14288	12351	2.40452	0.48872
206	-29.175	-37.307	155.934	19124	700	19123	1.96464	0.38004
207	-17.902	-54.205	171.785	18745	18568	18053	2.24362	0.42387
208	51.933	6.097	185.325	3711	1201	5811	4.98127	0.76553
209	18.073	-57.34	163.025	11237	6228	11226	3.97418	2.53893
210	45.763	12.336	108.124	10452	6653	14903	3.66254	0.68522
211	22.253	-57.7	182.715	15299	5793	15298	2.82287	1.18349
212	55.657	11.116	147.462	10990	5698	5148	4.19902	0.67524
213	79.149	-46.896	169.795	2879	239	8339	10.21322	4.19705
214	24.059	-61.912	152.575	6647	12015	12017	5.93547	4.09933
215	-30.622	-37.701	164.405	29	17891	17896	2.18105	0.63535
216	9.35	-23.217	203.638	8370	8324	240	5.16924	2.54491
217	31.933	23.718	156.355	7893	17746	17765	7.23317	2.4219
218	44.669	13.334	183.854	17756	6595	16187	4.22341	0.82705
219	43.59	3.107	97.064	9121	3513	8916	4.10185	0.6644
220	62.089	22.507	153.288	21501	14351	21482	4.0004	0.76176
221	84.794	-18.055	127.499	3847	20628	20627	5.44263	0.77346
222	33.881	21.603	121.922	7520	8406	8464	2.49019	0.69037
223	-26.971	-49.182	169.546	17739	17706	16300	1.99908	0.35578
224	80.334	3.746	116.877	23090	22968	19218	3.77325	1.123
225	4.924	-45.746	129.968	20841	20764	10679	3.72441	0.88165
226	35.398	-59.593	171.436	21066	21065	20110	3.89084	2.7391
227	43.552	-5.077	182.843	4920	2822	6581	9.08879	6.29922
228	43.548	26.462	138.084	11135	16303	9829	2.65346	0.2921
229	61.408	17.712	171.069	7325	22616	11451	6.70549	0.58616
230	0.858	-54.797	172.292	7750	10953	135	2.43143	0.99877
231	51.17	-49.819	139.325	11695	10422	8591	8.28274	2.37646
232	50.851	8.765	173.159	3502	3930	8392	6.4016	0.88429
233	63.463	-70.867	175.703	19723	19579	217	2.61628	0.41256
234	-6.654	-48.054	140.988	18463	19461	2533	2.96606	0.67322
235	-28.579	-40.591	176.757	17039	17003	16099	2.14527	0.76496
236	26.137	-55.425	187.779	18796	18727	9998	3.73228	1.04361
237	46.257	-70.901	185.519	15878	2276	8805	2.5701	0.47565
238	34.96	29.603	156.247	5645	1639	2563	4.21617	0.81365
239	39.414	22.407	150.729	21226	21188	21142	6.4431	1.6628
240	43.717	21.209	144.531	1569	20316	20447	4.41177	0.8878
241	86.898	-13.73	143.716	10473	4847	5839	4.845	1.839
242	20.457	12.201	187.297	13537	14259	6695	2.5244	2.31001
243	61.335	-26.657	108.064	31	7290	3142	5.82014	0.80396
244	-19.168	-29.979	189.354	17124	2342	17123	2.72031	1.34116
245	65.01	-58.642	196.509	3953	5835	3004	7.28194	5.1991
246	58.165	6.889	139.92	10505	10125	20038	2.39298	0.40483
247	66.612	0.361	114.582	17185	12053	13992	3.81888	0.94726
248	-43.193	-10.325	176.006	6612	3340	16424	1.55932	0.66902
249	-22.267	-25.699	188.568	159	7613	9402	3.21565	1.30798
250	-9.02	-35.828	190.791	1158	341	17999	2.46591	0.916
251	88.424	-55.23	155.435	8388	10300	10106	9.19358	1.98736
252	22.31	-62.725	167.356	7729	20686	20685	4.01123	3.1246
253	53.663	-23.465	110.717	5569	16179	4852	5.22962	0.73265
254	83.751	-48.485	152.989	48	7857	11912	9.10578	0.93748
255	-32.857	-43.521	164.059	16932	16891	15051	1.85779	0.26224
256	53.876	-9.572	107.448	19661	6594	7067	5.47994	1.08488
257	-7.471	5.469	182.869	20965	13444	21006	3.6246	1.08341
258	47.464	15.555	160.943	15509	3512	15472	6.87768	1.46911
259	47.208	-23.78	99.386	4227	4600	16908	5.14746	1.24585
260	45.282	2.669	96.733	21355	4910	11568	4.09711	0.67587
261	33.398	-54.567	196.622	5001	7746	116	3.92396	3.12539
262	48.592	13.794	126.544	16493	3603	2935	2.99808	0.58655
263	-30.011	-39.99	170.382	23102	14723	22149	2.27388	0.76697
264	84.534	-2.763	125.377	6358	1311	17697	3.57529	1.12883
265	76.686	-13.547	141.84	2409	18801	20993	5.17497	1.00353
266	74.684	-6.99	152.165	8986	7281	2786	5.75847	0.68531
267	57.507	22.987	158.466	14323	3289	13367	4.40175	0.77312
268	44.778	-1.386	191.78	15354	15350	7936	3.15822	0.73867
269	-36.429	-34.582	179.133	17982	18002	591	1.42894	0.65274
270	13.664	21.314	182.768	19396	18779	19324	2.7349	2.75313
271	90.691	-22.581	137.889	3382	792	15192	5.96064	0.88786
272	79.672	-64.287	169.452	1174	8737	460	6.73774	1.90426
273	-31.884	-46.493	169.486	10014	9979	481	1.87914	0.31139
274	-50.013	-25.488	166.847	6393	12663	10372	1.36872	0.52556
275	-17.857	-47.351	181.375	6206	19339	569	1.5656	0.51674
276	74.171	-12.576	126.874	17436	17399	13588	4.03242	1.60893
277	-43.102	-29.654	178.126	7415	2006	129	1.32869	0.57844
278	23.878	7.633	182.01	6460	203	6446	4.08586	3.41036
279	32.643	-38.384	202.28	20205	20070	13158	6.24237	2.49736
280	68.757	19.073	132.646	8335	1924	5106	2.2843	0.51873
281	19.963	31.311	174.506	12580	2658	4889	3.53471	2.12427
282	60.171	6.768	138.279	5144	4388	21388	2.16321	0.36154
283	-25.072	-43.84	168.303	4438	3160	8219	2.2205	0.80521
284	41.491	16.835	123.734	5358	9512	523	2.72005	0.72982
285	4.004	-23.146	202.145	23405	23366	751	5.74647	2.41107
286	80.399	-39.145	173.977	7344	18241	10383	10.95348	4.80662
287	44.661	11.766	104.826	8645	1363	2047	3.74817	0.6693
288	61.283	-43.95	188.794	9268	5450	10179	6.44109	0.93655
289	1.316	-45.732	141.546	18309	258	1428	3.92267	1.32012
290	-36.087	-41.092	169.586	938	8252	346	1.77298	0.29768
291	40.365	25.637	139.531	13733	11535	13235	3.16778	0.45361
292	45.475	12.335	106.449	11612	3605	15516	3.72081	0.68382
293	91.862	-25.945	138.901	12704	20373	20253	6.62464	1.15089
294	-7.883	-14.488	190.466	13284	13176	12307	4.92088	3.99068
295	59.744	5.527	179.831	10744	4357	10854	6.8516	1.06728
296	83.792	-12.649	123.202	10652	14018	2622	4.85578	1.07509
297	47.634	-69.537	197.482	11585	16010	11573	3.05374	1.10543
298	35.684	10.185	178.943	14504	7054	6284	5.33967	1.96767
299	59.704	-40.282	121.465	19747	1860	3815	7.83984	1.61665
300	32.404	32.272	147.055	13559	7304	1090	3.97954	0.78459
301	80.497	-63.17	160.503	18787	20836	1292	6.7613	1.23155
302	59.143	26.483	145.779	20	7903	7953	2.93849	0.46851
303	79.793	-54.719	184.675	21214	21163	3561	11.40557	2.77861
304	49.98	-31.131	109.724	11299	5866	11297	5.32019	1.12801
305	0.752	20.845	183.741	10146	18127	9189	3.4459	1.94912
306	62.253	-33.88	195.787	10536	18050	6089	5.92867	1.1085
307	20.025	-44.184	202.445	16183	3033	6697	5.66241	2.3828
308	81.229	-48.313	184.206	16917	7212	14639	9.87214	2.54319
309	-36.409	-40.32	170.716	7014	18177	23636	1.70949	0.34862
310	56.52	-53.695	146.814	1121	16593	3850	7.93287	2.02041
311	86.204	-12.027	143.002	23021	23019	22248	4.875	1.863
312	43.443	21.694	141.177	18242	9248	7832	3.72726	0.63029
313	58.477	-71.475	177.662	1877	13494	19917	2.29078	1.02878
314	69.017	-24.623	191.07	1868	9527	2049	5.49312	0.89225
315	46.132	-47.771	115.15	656	22312	7225	6.9885	1.31438
316	15.422	-54.805	135.258	12351	14288	572	5.174	2.01375
317	36.214	17.579	169.418	21175	21173	21079	9.78301	3.83124
318	61.051	-3.655	185.511	18116	12459	12492	7.03852	0.32753
319	91.522	-39.241	145.172	13586	14061	12690	7.9267	0.88077
320	37.825	-58.476	144.982	6321	5497	9603	6.28013	3.86663
321	18.118	31.461	157.712	5697	11296	11785	5.13233	1.80463
322	65.871	-45.724	138.122	21899	22627	1559	11.34772	2.11316
323	44.341	20.571	174.849	13674	21865	21957	5.00749	0.93962
324	66.107	-33.122	112.613	19850	19725	19724	6.15962	0.98288
325	61.108	-45.18	117.586	23076	23011	21733	7.07224	1.35339
326	20.14	35.571	157.872	10220	9484	10197	5.19468	1.51514
327	72.095	-53.298	156.211	14277	22866	19925	8.04678	0.9941
328	41.445	-59.606	149.331	16174	5731	5864	5.80987	3.97785
329	57.269	-59.538	144.598	23143	2327	23010	8.81776	2.06379
330	-12.459	-4.018	184.832	22730	2012	22641	3.23927	1.78494
331	49.333	12.9	182.33	21591	10309	11240	4.88399	0.78868
332	-51.516	-20.972	166.198	921	10655	20302	1.49064	0.49418
333	4.798	-49.442	186.214	3362	14882	3915	2.95089	0.4491
334	66.131	-2.774	127.47	19694	19622	2273	3.40893	0.62965
335	84.712	4.863	121.259	6999	4868	12408	3.469	0.96866
336	24.881	21.413	163.538	16038	15597	16037	7.40342	4.02157
337	39.491	29.038	163.961	344	4465	1944	4.0163	0.93451
338	45.765	-74.816	196.117	10377	7294	11334	2.54392	0.5465
339	18.838	-60.194	163.099	21498	21473	14587	4.21368	3.73021
340	35.298	23.322	153.665	5452	6268	6270	6.99065	2.06492
341	36.766	-43.138	199.799	15130	15086	9158	5.74883	3.37858
342	-45.744	-26.603	159.91	792	6062	15134	1.8295	0.3607
343	45.199	20.499	137.942	5401	2069	19928	3.34709	0.48162
344	-18.316	-47.385	145.187	6873	2499	5731	1.97288	0.35816
345	50.43	17.412	150.247	19841	18729	2999	5.06208	0.94621
346	73.021	-21.079	166.491	7679	15197	7077	7.91032	0.92393
347	74.328	-27.869	115.341	11607	10798	4159	6.03244	0.96855
348	77.416	-10.19	144.825	19232	19767	19568	5.23094	0.8086
349	81.774	-24.568	163.762	21252	3820	21216	8.22456	1.05976
350	52.381	14.984	153.975	19330	19181	6166	5.51576	0.98888
351	51.521	3.637	100.336	11866	16388	11613	3.98818	0.76103
352	85.852	-35.726	153.741	15279	15260	15207	7.81011	1.02358
353	15.916	-45.939	147.399	1998	13877	8991	6.41964	3.39682
354	62.508	24.3	134.606	15646	15633	14518	2.28297	0.43286
355	41.533	13.159	129.307	23546	18829	1994	2.78085	0.63761
356	46.974	14.421	181.832	19351	2962	21725	4.80899	0.83055
357	51.787	-38.118	189.7	12935	12892	12946	6.18653	1.02156
358	38.963	-54.152	141.023	2415	1166	12023	6.69595	3.11229
359	20.912	-56.909	183.72	16956	16910	7987	2.65375	1.126
360	32.197	19.635	125.93	9523	20854	20422	2.46121	0.6253
361	-9.714	-54.245	193.458	15573	15523	2726	2.10337	0.45405
362	8.968	0.797	185.237	8679	7667	14014	5.33548	2.36417
363	36.934	-71.809	192.251	3212	15047	14407	2.28487	0.76899
364	51.759	10.108	183.015	5016	3332	2499	5.05591	0.82199
365	33.417	-53.775	196.641	15337	17101	12200	4.35612	3.29872
366	-5.989	-50.509	157.999	6646	16864	4077	2.56584	0.75441
367	62.922	21.032	161.08	12420	12395	838	5.38594	0.67217
368	32.79	16.39	130.26	12256	12896	5567	2.45358	0.59077
369	7.894	-55.468	196.651	16326	7354	16322	3.23919	1.01041
370	39.559	-26.627	102.444	8966	10418	10424	5.06004	1.29984
371	-21.956	-16.003	193.685	15684	7102	5168	2.02607	0.63657
372	47.882	-36.623	110.198	1992	5830	15294	5.49952	1.22303
373	58.111	27.9	140.152	8549	8517	8010	2.49095	0.25832
374	61.238	-50.629	196.156	20804	3147	3143	8.05416	7.67137
375	67.719	-37.061	116.66	17044	17002	12085	6.63624	1.21305
376	-34.502	-26.666	189.662	17063	17550	15146	1.47919	0.70471
377	52.517	-7.773	181.483	828	767	11143	7.9277	3.50313
378	48.683	-51.334	190.868	8696	8276	17768	4.18079	0.91895
379	52.738	11.199	136.178	17743	83	1228	2.84809	0.49879
380	18.229	-6.357	187.599	813	2952	16482	4.87081	2.60163
381	11.549	-42.864	190.135	13976	14515	5255	4.09983	1.68032
382	35.839	-68.24	195.945	11865	13662	17241	2.45204	1.07216
383	-38.429	-27.99	186.323	17455	17414	13692	1.39275	0.69033
384	80.092	-18.923	148.917	9192	14720	14744	6.41284	0.72436
385	67.492	19.467	131.186	20625	20580	3975	2.61402	0.61851
386	33.786	-32.886	201.813	16701	11421	15516	6.52616	1.59208
387	97.119	-37.932	147.309	9254	11356	11378	7.84694	0.68655
388	78.533	-25.307	120.811	3959	18015	8905	5.96579	0.66587
389	-10.67	-47.539	156.624	6819	3395	13535	2.30718	0.5775
390	40.451	29.654	142.38	7394	12359	6560	3.05096	0.44845
391	32.988	-5.673	184.474	20959	2783	20928	2.83757	1.35326
392	66.739	5.778	120.022	19254	12440	19253	3.58114	1.74602
393	52.981	-1.926	112.833	18296	18215	18133	5.03512	0.94364
394	37.179	-26.664	200.323	496	12335	8919	6.53019	2.26736
395	51.947	-73.22	186.033	2301	8870	2883	2.71099	0.38313
396	62.717	-48.285	123.259	16006	14914	7622	7.3849	1.48824
397	9.958	-7.026	186.889	15120	15054	731	7.33011	3.51441
398	63.532	20.385	167.068	6490	21604	2709	6.36774	0.47874
399	-8.31	-28.865	190.836	3235	869	3940	3.58874	2.33423
400	87.34	-18.882	166.196	7513	14437	7310	7.58118	0.947
401	-38.984	-5.975	179.172	10279	7532	10270	1.52163	0.66429
402	20.805	-23.342	201.664	2100	16422	4888	6.23216	1.64526
403	-45.043	-30.669	163.028	4717	8852	11577	1.82097	0.29773
404	62.997	-9.66	104.837	16816	17394	180	4.95311	0.70484
405	56.768	10.504	159.632	6760	3968	12405	5.45328	0.83261
406	-51.951	-22.758	163.935	15225	15238	5761	1.44913	0.47691
407	55.902	23.627	171.033	10529	10509	9735	5.43039	0.65652
408	74.898	-56.123	143.01	8192	7019	8181	10.42564	3.24907
409	53.621	-61.744	180.655	19409	19338	19260	2.97338	0.80922
410	46.901	-55.532	155.99	6870	9600	9601	6.20875	4.57445
411	48.597	-55.452	149.969	14700	3585	12976	6.231	2.919
412	39.63	29.47	145.972	5485	9812	10435	2.88911	0.40839
413	50.156	-34.667	196.184	17663	17655	17647	5.60422	1.64903
414	43.746	10.249	106.092	18903	19871	10405	3.79423	0.64774
415	5.563	-47.183	137.322	6285	9333	10520	4.36197	1.62982
416	62.241	-11.245	103.849	20129	20503	20843	5.16377	0.71277
417	-44.252	-31.505	168.568	5707	9163	93	1.52	0.41047
418	50.869	-0.947	179.95	10498	7663	11653	7.50316	2.5406
419	59.491	-18.93	102.716	13099	15419	4188	5.51066	0.79166
420	64.82	-50.548	146.022	11178	11636	5740	9.84118	1.14224
421	85.637	-39.58	159.501	1305	9831	9850	8.0077	0.99759
422	50.531	-38.818	109.082	16382	16234	15629	6.42067	1.13136
423	-49.581	-25.676	160.672	10540	20645	1797	1.69216	0.31245
424	38.122	13.128	129.901	2671	11835	9185	2.70942	0.63027
425	58.435	7.624	146.733	15823	157	15673	3.51312	0.70123
426	43.157	28.365	143.766	9722	13871	13722	2.65143	0.31413
427	49.625	-53.306	145.189	19011	18917	18825	6.80992	2.99874
428	-26.072	-22.739	184.629	14894	6055	14858	3.12368	0.97405
429	77.504	-15.005	141.262	1135	7983	10091	5.03368	0.96139
430	48.553	-8.703	182.505	13276	4502	13243	9.06847	6.0738
431	63.316	-24.208	118.501	6297	8639	1871	5.7298	0.67077
432	1.54	-28.603	191.596	17022	16882	16983	3.42221	0.53261
433	3.187	-58.622	167.267	20576	8305	10343	2.83737	1.48182
434	66.341	-30.101	112.176	15080	13100	15058	5.95055	0.90917
435	58.281	22.624	159.138	3469	7745	19365	4.53943	0.80326
436	5.192	27.426	179.885	12288	11417	11216	3.36814	2.24911
437	-24.622	-42.531	164.497	15638	15630	4695	2.2095	0.77186
438	-27.193	-52.05	180.915	8144	5545	4522	2.01028	0.38612
439	-14.566	-57.614	191.771	5669	5692	4135	2.10549	0.37738
440	43.776	-55.555	157.217	12556	10312	12542	6.31255	5.62641
441	75.43	-37.528	191.324	7852	6978	5385	7.5634	1.81112
442	58.802	23.95	127.336	3683	4430	15999	2.60645	0.46588
443	70.331	-3.39	161.181	16658	16623	6809	7.97096	1.095
444	24.685	-61.055	148.246	6863	5909	13263	6.38526	3.7164
445	-13.358	-53.51	173.697	1361	1159	4966	2.37257	0.48419
446	36.026	21.372	123.452	18819	18621	2459	2.48629	0.62091
447	70.191	-36.608	195.203	7620	12680	17745	7.8708	1.8031
448	44.713	-63.187	162.46	9960	1588	3666	4.81732	4.35957
449	59.224	-29.048	107.311	14440	1467	5684	5.90151	0.88187
450	-14.656	-50.226	169.687	4914	17392	15361	2.00333	0.71692
451	24.64	-67.892	194.221	15958	1534	6692	2.06207	1.6829
452	33.654	-67.963	187.579	21099	1487	10755	2.22495	0.94793
453	54.455	-25.863	111.894	22976	22818	10875	5.26045	0.94645
454	-2.402	-17.799	196.779	4886	17290	6733	6.39612	2.37967
455	-17.806	-43.492	142.9	22858	16084	8934	1.93335	0.30314
456	64.008	-35.074	195.379	3584	7714	16314	6.32381	1.24896
457	-47.01	-19.179	179.268	10979	10776	5423	1.30313	0.62883
458	48.022	-12.346	99.799	9034	3702	11221	5.04511	0.98306
459	18.716	33.899	156.792	7599	4863	7505	5.25887	1.6467
460	83.926	-7.658	121.184	3568	11701	13943	4.34684	1.12023
461	19.67	-61.156	166.847	19090	19005	19089	3.63171	2.61965
462	70.744	-50.401	133.12	4084	17135	13575	9.38142	2.17058
463	58.237	-52.929	146.078	16790	23721	9375	8.76863	1.7042
464	70.814	12.969	155.586	3508	1847	10284	5.4608	0.82521
465	83.128	-3.824	139.519	480	10839	2543	4.539	0.435
466	40.808	22.338	145.565	9118	15531	1574	4.82901	1.09839
467	61.474	25.465	137.413	12274	21817	13641	2.31999	0.31703
468	56.694	10.164	133.481	7388	7883	7860	2.78321	0.59163
469	-20.419	-38.023	146.298	15132	17382	16865	1.89816	0.32487
470	81.422	-27.543	138.179	710	5203	14753	6.59115	1.20442
471	40.697	27.381	158.624	23652	10180	7094	3.74605	0.72917
472	64.641	-31.404	195.517	12571	368	1836	6.44464	1.1863
473	28.769	-24.448	200.688	16877	7974	2864	6.06337	1.27126
474	87.316	-13.626	156.58	23584	23510	9098	6.50855	0.75078
475	93.972	-46.477	152.771	17576	13341	17574	7.92507	0.76525
476	-17.191	-40.857	187.597	20717	7157	5574	1.82272	0.68008
477	70.988	-5.66	177.714	5214	11461	5508	7.75625	0.50238
478	97.703	-32.409	143.679	18016	8088	22557	7.31427	0.69801
479	-11.843	-50.304	176.194	1728	1721	1269	1.73524	0.59652
480	-42.803	-29.495	171.688	16481	5254	1097	2.30211	0.73339
481	67.82	14.254	120.459	3263	17150	15897	3.22791	1.35499
482	-34.128	-19.514	191.082	1660	21824	21953	1.34186	0.705
483	-6.465	-49.63	179.068	7826	11083	11109	1.89428	0.54036
484	44.908	-19.539	98.992	10653	20066	20195	5.12795	1.26754
485	-46.57	-26.298	163.012	7438	10102	10097	1.8417	0.4742
486	59.053	6.758	137.457	10600	9792	10589	2.30515	0.41692
487	-12.413	-23.737	191.002	16072	15981	10479	4.09989	2.92784
488	43.874	-51.12	118.574	11390	100	5715	7.50898	1.51177
489	75.087	-49.891	151.122	19236	10336	5105	9.70889	1.4845
490	49.503	12.704	107.763	15833	15696	15810	3.57372	0.74722
491	-51.005	-24.262	167.512	17487	1339	18337	1.37064	0.54981
492	18.342	-60.562	168.034	12911	12802	163	3.37508	1.926
493	57.389	-23.037	113.517	5964	260	4002	5.41692	0.69462
494	-28.42	-17.165	183.765	11437	8078	6346	2.71503	0.88067
495	84.701	-6.991	163.647	17980	17851	17970	7.9749	1.38965
496	45.627	9.073	101.738	4338	18464	18329	3.81082	0.67576
497	57.897	26.896	146.895	14820	14790	4111	2.89704	0.46949
498	-7.191	-51.702	160.422	13146	12593	13005	2.44968	0.81653
499	25.841	2.703	184.458	2955	2395	6617	3.47445	2.23611
500	35.852	-40.066	201.169	17509	17471	13480	6.07196	2.77716
501	91.672	-40.472	169.733	20883	749	20810	7.10723	1.37625
502	39.132	-0.663	96.648	21049	1794	21037	4.32641	0.75076
503	36.825	10.086	178.933	10741	9461	20505	5.48028	1.83466
504	4.913	-2.787	194.047	11081	11066	11055	4.97096	1.84071
505	58.043	4.444	105.963	18051	18164	382	3.672	1.011
506	69.641	-31.166	123.388	15296	15295	423	7.3315	1.40847
507	-26.471	-12.811	189.941	19614	19389	6693	1.78664	0.7536
508	33.408	17.659	130.119	13517	5176	17115	2.42768	0.53776
509	-7.394	-54.833	169.679	15053	6047	485	2.46393	0.75581
510	58.358	-22.505	102.946	11607	4159	11797	5.4768	0.79162
511	57.298	7.302	136.671	13351	14799	17909	2.39233	0.45574
512	-14.356	-17.774	195.213	12230	16922	12008	2.60745	0.68725
513	70.072	-9	179.7	10401	8593	14046	7.90811	0.4423
514	60.674	-51.211	144.125	22867	18090	14044	9.60029	1.39567
515	74.285	-4.772	144.516	9944	6291	778	4.59194	1.0447
516	92.687	-46.573	159.47	4260	1539	6007	8.62814	1.19073
517	49.465	2.725	98.367	17581	13757	13544	4.10737	0.74405
518	8.422	-24.736	204.053	2724	2123	1805	5.01893	2.17354
519	72.623	-52.332	154.261	6002	9728	10788	8.66995	1.05776
520	46.233	-62.587	158.015	10570	11320	10765	5.1169	4.3381
521	74.507	-51.722	174.062	5707	6068	10456	6.03418	2.31309
522	-37.245	-3.644	182.85	338	4909	4343	1.40008	0.65437
523	31.159	-41.059	190.704	13017	12933	12850	5.9832	2.90642
524	54.942	-48.012	135.067	14922	9089	14878	9.73832	2.0575
525	-46.879	-20.234	179.577	16539	7147	14593	1.28888	0.6288
526	38.697	21.507	156.588	7451	7733	3572	7.54111	2.24991
527	30.168	-64.76	158.403	22978	18895	18463	5.62034	5.93303
528	-22.228	-14.137	186.801	7507	18629	18074	3.03969	1.20361
529	64.419	-57.466	140.892	18939	8715	18214	10.22387	2.27004
530	-30.119	-38.537	150.571	10319	2459	2147	1.89832	0.28385
531	60.256	8.696	134.07	8438	8389	8221	2.69675	0.56138
532	27.025	-3.559	185.259	8365	20869	4034	3.3854	2.31775
533	68.689	15.873	154.205	12269	15848	1055	4.62897	0.8211
534	43.249	-67.827	179.395	17326	17247	7477	2.85445	1.1793
535	74.589	-60.491	184.759	11439	3124	7862	7.96994	1.99614
536	66.907	-68.404	167.357	16	14421	15903	3.9042	0.68707
537	80.251	-17.068	119.143	11606	16557	15459	5.30747	0.78188
538	44.447	-6.116	100.901	18975	20182	18350	4.55744	1.12772
539	38.863	-0.824	193.756	574	12785	12768	3.01007	0.8035
540	-31.89	-35.487	171.656	456	5468	10955	2.38871	0.76633
541	52.536	-67.657	197.02	7327	12880	5165	3.95627	1.68445
542	-35.765	-5.113	182.118	17587	19818	17728	1.66443	0.72325
543	61.076	5.791	149.248	23763	17908	23738	3.56968	0.89443
544	44.71	20.366	125.858	9331	3284	10005	2.59941	0.45781
545	65.165	5.234	141.478	20926	20859	20822	2.15	0.40854
546	5.839	-48.68	200.607	7210	7434	17011	3.51026	1.13297
547	58.949	6.89	139.032	17533	10482	17521	2.22656	0.3801
548	63.075	-69.528	171.951	20907	1705	2150	2.094	0.294
549	-43.905	-29.004	169.84	5197	13719	23478	2.1989	0.64685
550	56.85	-45.139	189.197	17372	15325	17374	6.05387	0.87985
551	87.514	-34.054	132.629	20819	20015	20776	8.83889	2.21157
552	40.041	-44.287	190.949	1466	6460	6446	5.11606	1.50541
553	67.085	17.333	156.809	19892	20246	20175	4.94383	0.71497
554	46.576	-73.863	197.669	10761	1330	21970	2.64733	0.64318
555	53.076	-2.51	191.276	205	14787	15360	5.64354	0.88098
556	47.953	-21.668	107.116	14104	14062	2841	4.93618	1.032
557	56.172	7.645	180.425	8217	5972	8207	6.18172	1.00311
558	62.665	-56.014	138.546	23729	23680	23702	9.91717	2.58594
559	44.468	-41.075	190.539	8394	5629	8295	5.63261	1.33983
560	-37.913	0.648	180.08	1136	22422	22863	1.4206	0.6536
561	69	5.528	120.93	16844	16800	16728	3.55184	1.66132
562	13.065	-59.2	195.655	9813	9811	2471	3.16318	1.24274
563	60.631	6.05	146.18	5662	299	4575	3.03497	0.72021
564	62.292	-13.124	104.102	11182	2905	6795	5.31781	0.73302
565	27.754	-59.464	172.594	11641	12418	10155	3.11182	1.68026
566	20.957	21.713	165.075	907	14482	7314	5.92645	3.11719
567	31.92	31.342	163.478	12810	18742	20097	4.42779	1.10975
568	-23.283	-32.437	186.599	11688	10762	2902	2.41614	0.90295
569	55.269	-47.852	118.484	1447	7840	7842	6.99635	1.31217
570	44.468	0.249	190.976	19012	9236	3476	2.472	0.354
571	49.514	-71.571	185.631	14599	14596	7493	2.65931	0.61332
572	60.41	-15.951	102.789	3884	5426	10775	5.47001	0.79234
573	71.461	-5.048	153.291	5103	7534	16519	5.51266	0.85815
574	-12.983	-53.634	176.022	13464	12753	9499	2.34853	0.48128
575	70.669	-10.026	161.975	12108	17167	17296	7.63598	0.91232
576	3.98	-60.433	174.836	15079	5952	15009	2.70421	1.14432
577	59.614	25.578	148.919	6868	4115	20396	3.17982	0.58537
578	62.19	-16.441	118.221	22468	22212	22380	4.85667	0.61259
579	-17.778	-25.918	197.472	17937	9193	17929	2.13164	0.50158
580	43.951	7.974	177.258	20407	1672	20287	5.98581	1.36237
581	41.904	-72.454	188.153	15473	12790	15510	2.45343	0.62645
582	-12.148	-38.243	144.385	6079	14859	3794	2.03631	0.37381
583	-43.15	-24.269	183.451	3200	3951	19715	1.32065	0.64652
584	33.357	-10.039	197.911	7596	3688	17705	3.09129	1.25955
585	-6.977	2.611	182.471	11660	18085	12926	3.82044	1.05528
586	-49.277	-24.273	159.097	15586	15519	10912	1.69343	0.33243
587	58.359	-41.909	189.002	14355	15046	15037	6.50753	0.88284
588	-3.979	-20.22	191.856	2108	8203	11042	5.90003	2.92378
589	60.539	6.718	137.332	19475	1474	18455	2.30442	0.42232
590	38.999	-66.63	195.849	5805	10005	9986	2.78196	1.09292
591	62.777	4.361	110.92	12463	17670	17668	3.67938	1.09924
592	17.737	0.396	191.323	19207	19118	10373	2.8504	1.71262
593	17.234	-55.179	134.983	18372	19340	22569	5.04455	2.25138
594	71.728	-22.142	168.126	18292	13780	16969	7.80677	1.02608
595	-32.654	-19.297	182.801	2344	17678	17685	2.81452	0.86564
596	92.657	-31.204	150.278	14751	14708	8782	7.19735	0.75949
597	83.45	-53.949	183.133	8496	16689	16607	11.52847	2.94135
598	-22.822	-53.945	168.088	5998	13463	13425	2.09005	0.41573
599	63.997	21.645	152.233	5837	20152	10365	3.90547	0.75305
600	52.913	-57.201	188.832	8412	18695	19816	3.18838	0.52989
601	-52.079	-22.667	169.7	19880	19690	19823	1.36541	0.55758
602	25.286	24.068	158.63	17173	3846	17172	6.60758	3.08055
603	50.723	0.671	97.432	11859	11839	10071	4.27127	0.76198
604	42.72	24.06	164.967	2822	953	2160	4.34245	0.88366
605	29.634	-65.045	176.367	4294	11798	1041	3.02439	2.50426
606	59.184	21.451	170.496	8733	3755	6188	5.937	0.58415
607	30.593	-65.917	195.459	19843	2194	3179	2.22541	1.36452
608	62.997	23.874	139.866	12738	4743	5019	2.39796	0.38318
609	-24.739	-51.45	173.486	14817	17302	17380	2.08797	0.37759
610	75.864	-37.249	124.602	1872	8499	8522	7.52035	1.49581
611	53.835	22.209	173.179	8787	18561	4033	5.6357	0.65782
612	0.399	-54.516	173.449	10612	20350	20459	2.4574	0.89455
613	-3.408	-56.395	195.342	20019	23785	23773	2.40718	0.60066
614	18.93	22.299	161.553	3960	19390	19485	5.77639	2.87646
615	49.574	12.091	133.887	20466	20404	20522	2.95928	0.53899
616	2.106	-39.625	198.906	17083	5397	17000	3.234	0.97286
617	-7.456	-57.481	193.675	13279	17158	1478	2.18366	0.49244
618	65.301	-40.438	187.242	10991	3221	5450	6.9158	1.04786
619	59.186	-35.102	109.006	3833	1533	10096	6.28498	1.02019
620	65.167	0.352	169.873	13953	2291	13864	7.86541	0.93649
621	55.132	-60.641	185.556	1710	3932	14471	3.24236	0.66848
622	-6.431	-42.857	186.875	17392	16897	17310	2.03877	0.61998
623	41.127	-36.414	198.772	7755	532	2333	6.58316	1.91112
624	34.086	-69.633	195.844	18245	18163	13863	2.27045	1.11541
625	68.111	16.107	127.872	13410	21810	22067	2.72009	0.81448
626	-0.243	-58.408	177.455	2530	2061	15771	2.5479	0.82863
627	25.634	-35.754	203.71	1556	2376	13091	6.76397	1.52011
628	-11.381	-55.557	192.819	17241	2951	15514	2.0437	0.36895
629	85.816	-42.926	137.725	16457	9502	16357	8.86188	2.11667
630	-16.263	-48.781	167.065	18148	10831	10660	2.08892	0.74442
631	-41.18	-33.334	173.564	8280	2920	3046	1.43278	0.48741
632	68.922	-55.871	196.598	21147	8360	12354	8.85981	5.59759
633	57.993	-55.282	159.931	980	11163	11147	6.14081	1.78441
634	25.134	23.797	178.593	5851	5098	9956	2.82998	2.62327
635	48.331	-1.528	106.999	23343	23241	23340	3.771	0.429
636	86.022	-1.39	121.975	16384	7122	16337	3.82372	0.98295
637	53.872	-14.813	106.335	8421	14908	12759	5.5698	1.05226
638	19.793	-50.452	149.252	21273	21214	8559	6.58217	3.43368
639	64.023	16.641	121.359	22157	13616	22071	2.92609	0.5116
640	24.292	12.119	178.921	15354	3570	4299	5.75646	4.45104
641	-47.044	-20.987	178.976	8791	7103	12820	1.28672	0.62857
642	40.658	13.029	128.63	18515	20247	20370	2.75526	0.66638
643	66.371	16.566	118.964	10155	12418	12437	3.04848	1.01541
644	82.622	-6.126	130.541	13318	13301	11275	3.74674	1.65841
645	20.04	-45.211	202.315	10779	19856	2964	5.52951	2.34079
646	71.867	-27.179	172.985	10205	3974	10455	7.22847	1.71575
647	-41.745	-21.789	177.416	12340	13068	19513	2.50318	0.80521
648	85.437	-4.926	143.481	22175	22098	19984	4.82667	1.05163
649	42.89	-55.961	153.249	12025	16637	16551	6.31843	4.91966
650	49.733	11.965	167.828	8935	9324	5306	6.4745	0.83223
651	23.591	37.551	162.151	11392	5570	9684	4.80712	1.34729
652	45.076	-63.464	164.813	3470	4305	2820	4.63379	4.20911
653	21.715	39.241	160.966	17714	974	1432	4.82538	1.44947
654	82.143	-52.758	144.088	11119	8970	11075	10.16579	1.33385
655	70.44	-9.626	163.104	11258	17534	5737	7.84232	0.97514
656	60.728	-74.271	185.82	17785	2	17749	3.23229	0.64911
657	53.834	-18.124	100.289	3987	18457	6578	5.23961	0.8742
658	61.884	4.763	155.203	12484	13461	13481	4.84006	0.82573
659	49.183	-66.295	175.815	16031	10671	4746	3.44412	1.51563
660	40.872	13.381	130.77	5407	12075	15251	2.79507	0.56588
661	55.073	-25.337	102.149	15477	15371	15432	5.50274	0.81203
662	27.985	-12.984	198.826	3101	6363	20442	3.80493	1.61419
663	73.828	11.98	145.736	7966	10860	14833	3.08136	1.68684
664	48.373	-1.27	96.251	5909	10340	13263	4.42907	0.78805
665	-11.563	-55.11	184.576	3935	20930	6629	2.29037	0.40446
666	24.715	-4.011	194.673	11770	15105	15969	3.15155	1.60819
667	50.65	11.589	106.145	17248	1864	17219	3.54113	0.75708
668	15.552	-57.168	150.568	4429	8410	7709	6.22767	2.0473
669	49.36	-54.003	190.501	16919	16918	16422	3.49007	0.66348
670	-12.717	-52.011	192.037	9227	6428	6671	2.22907	0.50781
671	72.848	-23.226	184.259	15217	7371	15807	5.55558	1.49399
672	23.103	-39.415	192.448	3622	742	4353	6.138	2.829
673	60.48	-11.868	102.147	6949	11563	5699	5.24723	0.77025
674	18.045	13.118	187.494	3635	10858	10572	2.51922	2.44417
675	55.979	11.839	115.392	22704	14157	22531	2.6561	0.89027
676	65.51	-59.45	180.121	11709	16334	559	3.3299	0.52361
677	61.337	4.075	162.056	10257	18967	18883	6.59654	0.85536
678	-44.327	-17.101	181.193	7735	6161	10188	1.29106	0.64455
679	39.358	-57.497	140.42	6653	14811	11259	6.96426	2.73961
680	-28.45	-48.564	170.529	4056	6264	15048	1.96116	0.35072
681	39.381	-54.207	133.634	10974	10958	9417	7.4759	2.39249
682	76.658	-54.501	142.653	11711	5455	8427	10.68723	3.51156
683	32.167	20.098	122.658	11781	4750	1202	2.4874	0.7286
684	81.151	-54.039	164.898	23033	22830	22988	9.02898	1.42432
685	-14.192	-39.075	146.831	14051	14890	8692	1.99824	0.37207
686	16.595	-63.518	178.245	984	840	2899	2.66456	2.19663
687	31.207	-45.101	191.512	5656	2173	13267	4.84767	2.03187
688	59.678	6.448	146.489	12686	12531	12655	3.10336	0.71321
689	-6.098	-24.004	191.522	17300	15563	1827	4.37246	2.88932
690	56.616	-29.197	105.372	2775	5440	17520	5.89603	0.89235
691	19.512	-61.047	166.089	6500	2058	394	3.459	2.037
692	4.26	-17.544	199.662	3026	13681	14020	6.40298	2.96209
693	-40.704	-28.499	184.284	5407	15251	13432	1.35804	0.66497
694	56.183	8.937	141.199	19011	1186	18917	2.88655	0.5048
695	22.846	-61.753	159.562	5471	19287	19203	5.1134	5.25915
696	53.457	-1.648	116.075	8488	12704	19763	5.00462	0.94526
697	84.581	-26.045	175.113	138	9189	16830	6.60147	0.93264
698	57.326	7.239	139.087	17230	6777	2091	2.45802	0.42618
699	36.248	22.416	176.3	13804	13782	13758	4.0465	1.35846
700	-12.128	-49.484	159.973	843	1332	11383	2.23096	0.63587
701	-0.166	-34.378	191.694	20663	3346	20004	2.59022	0.58643
702	22.546	-62.795	166.458	19903	19844	19776	4.12591	3.41492
703	84.699	-6.879	123.627	9722	14222	13192	4.11786	1.39803
704	39.197	29.873	140.049	12277	15850	17326	3.34596	0.54325
705	51.742	-46.574	131.288	15742	15645	435	9.22988	2.21111
706	36.452	30.331	167.905	15856	7744	6801	3.82837	1.26616
707	78.304	-15.414	145.921	7934	10282	1103	5.83954	0.75923
708	-37.559	-18.534	180.714	23697	23576	14130	2.64924	0.83375
709	46.2	-51.17	141.208	23610	21401	13337	7.13661	3.08093
710	71.918	9.247	123.76	11375	8633	11365	3.26568	1.22305
711	66.601	-27.378	181.849	8702	9629	8768	5.70877	1.03929
712	43.971	-66.819	196.004	12212	11748	15893	2.63224	0.90783
713	40.801	-57.727	140.9	1068	19628	19700	6.98731	2.71284
714	68.812	-49.667	187.923	1325	3959	1342	5.87596	0.80408
715	69.379	-6.158	172.479	9355	144	3384	8.66358	0.63097
716	48.055	-72.99	197.316	10438	8016	13441	2.74817	0.75859
717	-20.311	-37.854	145.178	11186	10135	3792	1.88721	0.31264
718	-47.358	-25.644	164.433	6742	3507	8393	1.81931	0.48579
719	55.465	-44.872	114.137	9188	18598	18358	6.87611	1.22384
720	29.388	-44.906	191.73	4114	6423	6411	5.29513	3.19988
721	15.011	26.23	173.344	8325	10598	3141	5.23501	2.32815
722	1.136	-57.698	166.023	13895	9256	13033	2.68759	1.27971
723	-20.87	-46.578	178.769	13575	13045	4861	1.75699	0.60189
724	48.471	9.915	103.41	3541	6065	2434	3.72492	0.71952
725	50.464	12.424	115.551	21795	21515	21714	2.93217	0.81301
726	33.254	-69.07	189.026	6244	21451	2102	2.21823	0.94785
727	41.93	-14.344	185.454	21049	21037	12835	8.3281	8.18814
728	21.547	-10.189	198.824	13760	14937	1934	3.95176	2.27719
729	14.978	-47.157	149.799	105	91	17931	6.34417	3.13356
730	41.022	-27.186	98.151	6741	2778	2316	5.20547	1.41058
731	54.671	-68.32	196.765	5972	8038	8162	4.02574	1.73513
732	13.079	-62.206	181.103	17955	18560	7633	2.64561	1.61308
733	29.283	28.715	160.758	6632	12843	19298	4.71906	1.12219
734	65.375	20.21	163.206	20864	11537	9552	5.79344	0.59416
735	36.153	12.945	129.38	20349	20318	20317	2.60437	0.6682
736	89.235	-22.548	133.182	12697	17736	7620	5.72601	0.80145
737	61.313	-36.838	195.784	8691	3328	10113	5.8986	1.34246
738	31.299	33.126	176.858	12259	16082	12398	3.39681	1.96479
739	68.668	-16.613	108.478	17236	14219	17246	5.29544	0.71157
740	29.233	-29.541	190.271	12871	19879	9643	6.30611	2.40535
741	15.857	-52.943	125.619	3243	10770	20069	3.76788	1.33533
742	-37.045	-1.537	180.217	20781	6778	9541	1.49113	0.66412
743	-29.596	-48.785	173.452	2397	2979	15338	1.99106	0.37584
744	7.279	-17.015	188.341	14490	16779	16810	5.99802	2.12377
745	53.674	30.454	135.163	12225	14800	3428	2.41654	0.22817
746	52.402	-50.8	121.338	5214	5508	6111	7.11975	1.41162
747	78.547	-38.322	138.252	20725	20665	20621	9.36308	2.69907
748	-4.908	4.508	185.853	18169	17962	10614	3.9636	1.25551
749	40.539	-57.463	139.872	10697	11288	4101	7.21304	2.58211
750	54.904	-44.964	189.334	22241	18564	22068	5.9739	0.89453
751	88.717	-39.401	174.941	519	1898	19423	6.25188	1.32707
752	1.89	22.387	174.082	14365	13286	16925	3.98494	1.85567
753	19.268	-50.63	143.664	6837	4213	12571	6.50237	3.70728
754	69.361	-9.37	108.261	1778	4506	6066	4.74159	0.57516
755	-3.016	-0.018	193.014	23529	23487	23448	4.31063	1.49301
756	63.584	-29.261	110.468	2308	23282	23145	5.94228	0.86813
757	61.13	5.4	154.45	17126	13950	17004	4.70016	0.85131
758	34.957	-62.394	196.053	9225	5135	10730	3.18777	1.24646
759	-14.447	-49.225	145.943	11849	14864	14808	2.17858	0.43841
760	82.966	-2.376	126.39	6293	7454	8510	3.47267	1.01592
761	43.161	13.001	130.224	21639	1810	18958	2.86841	0.57531
762	40.41	-0.737	94.08	17259	17169	8332	4.46678	0.70425
763	15.706	-54.687	131.714	13471	3616	21838	4.56268	1.83663
764	40.758	0.873	97.575	4236	7926	6289	4.20198	0.72339
765	33.418	-53.008	196.629	16103	10691	1435	4.53603	3.58769
766	-13.415	-48.792	145.24	13160	6025	13080	2.24081	0.50911
767	69.436	-43.662	122.935	10764	7476	10894	7.81884	1.68488
768	44.375	19.94	131.033	20878	19201	20877	2.66022	0.33865
769	14.713	-6.607	187.065	22610	3944	14406	5.79458	2.98991
770	72.363	-35.114	118.854	6462	11834	4686	6.65116	1.0515
771	-12.697	-26.033	190.905	8170	13818	13872	3.58957	2.38388
772	61.72	5.925	145.452	22233	8866	13566	2.83133	0.6976
773	40.519	13.213	129.376	2558	2776	3191	2.74407	0.63262
774	-44.365	-25.285	181.533	6471	1520	6451	1.29876	0.63699
775	6.007	33.459	171.836	5133	8350	20497	4.25698	1.61775
776	47.856	12.746	108.607	19754	6336	10341	3.62653	0.72274
777	-44.228	-28.367	159.843	21222	21342	21354	1.93488	0.38168
778	48.089	-50.233	190.814	12804	9686	12914	4.53859	0.97372
779	84.64	-45.151	151.556	4724	1912	14391	8.93905	1.21148
780	61.898	10.042	129.808	891	4892	4525	3.14586	0.73582
781	69.77	-5.233	109.634	4605	5477	10123	4.206	0.4125
782	-27.32	-35.544	143.73	961	20117	5671	1.85185	0.22829
783	47.244	19.31	125.752	9973	7461	5419	2.6841	0.47114
784	54.874	3.723	120.449	10902	11279	3739	3.84353	0.77072
785	56.88	23.324	170.871	10605	10614	276	5.52095	0.637
786	4.205	2.022	184.61	9303	9262	19024	4.54024	1.30427
787	49.877	-52.346	143.64	10070	1407	8586	7.04527	2.85503
788	3.311	-56.137	193.164	18339	18092	18319	2.67718	0.67215
789	44.077	5.399	113.714	10384	2489	8946	3.79679	0.65117
790	-47.502	-14.3	177.457	20173	19770	20114	1.36058	0.6426
791	57.675	-8.578	100.202	12144	4630	12007	4.9122	0.81926
792	7.26	-46.451	133.404	3956	3724	5592	4.15625	1.43402
793	49.971	26.2	148.389	16145	7661	16091	2.86533	0.39631
794	0.387	-31.85	200.238	234	4487	14604	3.5	1.02656
795	50.654	9.332	120.898	3506	1764	3768	3.37437	0.70792
796	44.383	-50.891	132.225	3397	11681	12456	8.13932	2.32323
797	-23.29	-52.646	177.563	7381	941	6022	2.12395	0.35726
798	30.779	-46.287	191.546	1262	646	17996	4.425	1.182
799	68.091	-18.637	123.399	22795	7640	3869	4.80871	0.71802
800	49.316	-37.864	197.053	2893	10953	7750	5.45469	2.04155
801	3.758	-6.501	187.533	22680	1365	3421	4.55034	2.33837
802	58.726	-48.609	121.172	18093	17695	382	6.81	1.299
803	-22.587	-53.797	165.044	13226	19603	19678	2.08701	0.428
804	51.508	16.424	152.123	2511	10371	121	5.095	0.91591
805	14.587	-43.483	190.808	20216	20233	20232	4.67872	1.91938
806	44.407	-36.843	189.997	22545	22459	10827	5.90548	1.50728
807	40.527	18.452	122.55	10136	10113	7281	2.65632	0.72744
808	6.361	-39.761	201.509	9719	16838	16768	3.68802	1.21468
809	41.193	28.682	149.095	23793	23785	20019	2.92228	0.40127
810	45.251	-3.868	95.762	6917	16456	10807	4.6663	0.88356
811	-16.478	-40.887	192.624	11657	9310	14677	2.28466	0.46777
812	78.137	-17.006	115.889	10110	16349	16399	5.22202	0.74034
813	-43.612	-21.931	183.037	12931	8820	35	1.30008	0.64976
814	96.426	-30.054	143.219	11279	7582	3739	6.91064	0.71098
815	81.078	-23.878	123.842	23531	21390	23489	5.73989	0.68894
816	42.61	-2.097	99.962	6784	17435	16327	4.29919	0.8349
817	36.49	33.208	165.32	1169	15208	336	4.03168	1.03833
818	23.218	33.188	173.754	11118	11075	2654	3.54329	2.09561
819	69.083	13.943	122.037	19936	722	19807	3.20855	1.2466
820	45.282	20.276	130.367	8322	6253	6083	2.62182	0.34446
821	41.714	18.588	122.782	85	17270	6630	2.64007	0.71081
822	-10.775	-24.12	190.382	7633	18114	18558	4.16053	3.13307
823	59.163	14.24	176.029	10385	19237	19150	6.91838	0.99652
824	20.037	-52.895	155.404	4875	2397	4103	5.31634	1.87561
825	36.413	-68.447	186.071	7880	3215	6329	2.244	0.468
826	59.689	-25.151	105.413	1773	8080	6382	5.67076	0.79838
827	-11.807	-46.677	145.98	17063	12766	17550	2.49368	0.56402
828	-4.785	-3.363	185.458	20364	20107	20304	3.96104	1.28106
829	-6.11	-47.577	144.647	5868	15952	15829	3.177	0.74572
830	70.735	-9.088	160.636	8430	3502	8392	7.6351	0.93935
831	59.576	6.757	140.575	5707	10456	9163	2.27481	0.38179
832	-18.094	-44.925	161.67	9259	19471	20460	2.16578	0.71808
833	52.696	11.028	106.9	12862	7963	12290	3.46661	0.79219
834	-10.746	-44.812	195.698	18047	17768	17719	2.45901	0.52294
835	91.364	-26.605	149.896	3148	12973	12067	6.35785	1.01871
836	70.72	-64.548	159.928	20399	20282	20351	5.403	0.99
837	-10.126	-49.878	177.114	9268	10991	5450	1.72962	0.59263
838	70.936	-25.268	188.298	3936	5300	7529	5.433	0.633
839	64	-38.094	114.416	20329	19454	10134	6.62648	1.16383
840	3.684	-56.496	166.903	6843	13168	20893	2.76055	1.49472
841	3.081	22.708	173.774	10299	6093	17244	4.05458	1.89273
842	2.707	-50.123	145.551	13439	13365	13422	5.21872	1.60745
843	36.012	23.583	151.024	12606	12207	13736	6.71692	1.91676
844	-5.179	7.304	182.912	8277	16234	16382	3.99351	1.19623
845	73.941	11.215	149.11	14766	11447	11718	4.16091	1.39547
846	89.941	-40.685	172.907	19208	12461	19120	6.71371	1.47051
847	-10.703	-34.554	190.961	19141	18880	7198	2.55176	1.06889
848	65.301	3.238	158.561	13686	6580	10316	5.97511	0.81091
849	14.883	-60.236	195.728	19958	4139	20067	2.97932	1.26945
850	76.266	-8.694	134.136	8967	11077	11062	3.73989	1.84371
851	-37.52	-30.422	185.174	9153	9596	20290	1.39324	0.6889
852	70.637	-39.258	195.172	7196	5119	6787	8.3132	2.41605
853	13.425	-46.152	141.484	22879	22631	10803	5.47127	2.61
854	27.963	-53.9	153.407	13718	15775	15196	5.83385	3.32246
855	1.798	20.609	174.652	3024	1792	17955	3.87767	1.88419
856	57.357	-9.139	110.443	10660	18020	9238	5.52136	1.03257
857	39.048	-26.335	199.61	18428	7128	18426	6.91671	1.81442
858	77.534	-10.147	134.954	22210	21954	18564	3.8363	2.32235
859	64.79	-28.336	183.533	14081	13560	12223	4.863	0.534
860	48.303	-75.055	194.062	150	15347	15307	2.70694	0.58324
861	59.39	6.95	148.733	6201	5182	14699	3.74326	0.76244
862	56.588	-23.818	113.151	18761	18580	18404	5.38056	0.71617
863	39.641	-60.784	173.503	11981	2642	4671	3.61387	2.41273
864	-2.532	-19.374	197.185	12894	4398	12657	5.43598	2.12206
865	62.249	24.667	141.334	17031	13951	4316	2.5736	0.40395
866	43.888	11.235	111.866	16214	16106	16109	3.55128	0.69666
867	57.419	-58.301	164.309	9656	8057	5991	4.39788	1.42025
868	71.619	-34.077	117.543	11024	17564	1056	6.50279	1.09107
869	-22.061	-45.316	179.884	9403	17446	14934	1.75699	0.60189
870	63.709	-70.314	186.656	8940	11703	11457	4.21125	1.16187
871	56.87	9.259	144.642	22015	21807	2513	3.30373	0.58736
872	-1.67	-49.864	198.954	15534	15531	11682	2.53204	0.79709
873	54.953	-61.536	195.838	7289	1133	7154	4.99436	2.90759
874	-15.883	-48.953	154.283	3240	6342	6281	2.22505	0.48668
875	1.514	-54.956	166.677	16213	16027	982	2.56357	1.29613
876	81.122	-3.285	130.015	14269	14066	6680	3.43727	1.07339
877	-36.397	-21.951	190.897	10147	10944	10936	1.43116	0.72867
878	-45.495	-10.008	176.518	18192	20385	20339	1.48885	0.65854
879	11.109	-49.31	127.445	3918	10209	10229	3.80632	1.1326
880	-24.392	-37.557	156.692	12542	10312	12417	2.02822	0.48278
881	55.771	-47.338	132.675	3599	15964	15912	9.75154	2.01643
882	19.508	38.163	163.317	16242	6525	1219	4.66473	1.48278
883	43.792	-65.74	195.829	2856	4804	15301	2.53099	0.92163
884	45.107	-60.821	170.878	15491	15412	5838	4.4733	3.48557
885	19.039	-6.926	187.91	1324	11815	434	4.6931	2.48281
886	59.237	-23.425	185.262	21134	759	4996	6.46369	1.12075
887	64.045	-41.213	187.833	16440	15076	7400	6.95465	1.12808
888	-41.237	-28.28	175.813	20998	18571	2297	2.4371	0.79136
889	65	5.472	149.437	6233	18617	2043	3.68736	1.10438
890	51.22	-39.58	114.877	19085	4223	19083	6.41877	1.39112
891	65.913	-67.729	166.427	12856	1928	18881	3.9042	0.84324
892	44.23	-24.825	105.582	14747	14478	16864	4.9145	1.1885
893	49.631	21.479	175.218	11425	10560	1414	5.57172	0.71713
894	34.568	29.279	171.747	17877	16267	7402	3.60613	1.51075
895	57.288	28.704	137.741	14707	6330	14705	2.289	0.168
896	31.745	-23.686	201.036	8066	10498	11665	5.55096	1.88981
897	91.729	-42.466	169.124	20541	641	20540	7.68397	1.60162
898	-30.525	-19.115	183.227	21910	21809	19893	2.85053	0.89735
899	92.799	-38.068	159.093	10044	632	4709	8.71243	1.19615
900	53.641	-59.368	144.126	4861	13045	17094	8.29341	2.18969
901	24.852	-55.084	148.178	4918	2729	13405	6.48903	3.56956
902	40.376	12.395	174.478	8270	3508	8653	7.23109	2.62033
903	23.917	-58.884	175.111	17323	17243	17288	2.89841	1.59977
904	59.315	-20.1	102.844	12826	23408	619	5.46942	0.79167
905	0.66	-58.805	167.762	13977	7824	6667	2.72038	1.29265
906	64.907	19.738	119.87	6164	12686	12800	2.88867	0.64382
907	46.036	8.578	115.819	15726	15529	15510	3.42039	0.70936
908	48.034	24.566	161.888	21030	20971	21029	4.17141	0.76513
909	78.228	-64.423	162.608	5361	9599	10950	5.31613	1.25055
910	40.994	20.455	173.489	3228	5654	5955	4.65731	1.02066
911	16.436	-55.463	134.306	2226	4663	3934	4.98399	2.12644
912	23.338	37.756	163.421	12504	2816	4078	4.67175	1.36573
913	28.287	-44.364	202.107	1491	1008	1918	5.86272	2.94423
914	12.82	-48.365	121.709	5047	23037	22986	3.36562	0.92258
915	45.365	11.845	104.147	4317	18125	17953	3.74825	0.68207
916	78.264	-61.24	156.919	7796	9529	10065	8.06424	1.1699
917	42.032	-31.975	102.336	20081	19941	18407	5.46805	1.28723
918	61.83	25.008	133.566	15977	15934	927	2.32992	0.40529
919	-13.246	-39.321	147.266	2683	13142	22646	2.07433	0.40304
920	-9.745	-27.885	190.735	17862	15839	8115	3.678	2.53692
921	70.236	15.679	145.533	8587	4973	8578	2.66495	1.00047
922	19.699	-36.768	192.391	14096	14646	16964	6.18969	3.432
923	34.022	17.455	130.294	11434	10246	4067	2.43598	0.51437
924	21.411	26.539	176.879	4493	6857	20704	3.01324	2.52067
925	-36.413	-20.892	182.04	20165	13158	20106	2.80197	0.85481
926	55.273	11.045	145.003	16329	14539	16211	3.61342	0.62649
927	28.331	-54.289	154.549	11188	11156	10135	5.44365	3.25746
928	83.329	3.046	117.928	3224	7472	1584	3.82858	0.91241
929	78.557	-64.443	177.072	5691	9606	8328	6.126	2.448
930	-14.236	-52.5	167.255	20269	20098	8138	2.25491	0.5446
931	65.185	-58.029	142.044	6841	19694	19621	10.23704	1.99473
932	21.079	-62.727	171.983	3039	14943	14698	3.21318	2.26103
933	-51.406	-20.489	168.597	861	14239	14238	1.47034	0.56288
934	45.324	5.943	99.779	13499	4531	13482	3.92087	0.67638
935	14.876	-24.713	202.802	6863	10340	5909	5.76836	2.06367
936	56.863	-52.863	145.703	20479	1034	7458	8.16032	2.00225
937	49.115	17.978	151.387	19853	3753	19793	5.32475	1.01823
938	29.505	-64.536	157.638	11452	13867	11210	5.70012	5.83451
939	-30.146	-47.67	170.224	10508	11730	11703	1.93743	0.32603
940	12.02	-43.382	123.328	12137	10690	13397	3.20518	0.87534
941	5.409	32.476	171.83	20480	20413	2477	4.25718	1.63833
942	52.983	-45.494	126.34	11476	11245	2682	8.77976	1.87047
943	52.267	-22.796	194.283	7190	10333	1033	7.5809	3.17797
944	8.574	-50.515	135.49	5213	7111	10455	5.02528	1.15668
945	75.277	-40.547	136.304	14977	9326	14945	10.22335	2.18728
946	-45.028	-25.765	180.174	13696	14601	10437	1.28479	0.62275
947	70.208	-25.456	190.17	12369	17307	17345	5.35119	0.89303
948	18.597	-51.179	152.471	20958	20856	6712	5.81856	2.59895
949	42.32	16.046	133.396	15989	12698	11621	2.96668	0.45298
950	57.899	-29.104	114.489	10927	8938	9333	5.81605	0.96524
951	58.899	-55.441	137.005	16059	11770	15969	9.19307	2.31413
952	-23.195	-45.902	171.799	19127	2364	18863	2.12949	0.7782
953	20.305	-55.267	161.505	16483	16284	7147	4.21206	1.86725
954	69.547	2.601	143.806	6096	9503	3269	3.07178	1.18729
955	42.915	27.776	152.429	7480	20204	9386	3.17499	0.50579
956	-29.709	-15.793	182.927	7753	15697	15777	2.66309	0.84124
957	-2.601	-50.374	180.74	6415	3489	834	2.35634	0.51156
958	-13.906	-45.467	185.528	5246	3998	1438	1.58016	0.53998
959	70.442	-58.884	145.369	4121	15064	6511	9.98215	2.57699
960	6.118	28.362	179.111	19815	19750	433	3.42134	2.21078
961	64.385	-48.037	124.184	4468	7827	7883	7.4948	1.57219
962	-9.302	-54.374	170.474	1208	14618	6011	2.43136	0.65283
963	70.609	-31.98	178.433	11400	17193	17191	7.41537	2.12274
964	83.883	-7.398	167.776	16053	7914	16051	8.47079	1.54238
965	70.918	-6.526	155.296	2600	18979	18890	5.96421	0.72427
966	-15.054	-37.519	144.001	13255	10900	10745	1.94984	0.33236
967	48.851	-48.742	198.011	18345	19493	19410	6.0271	3.62134
968	52.891	-26.227	101.389	10579	2164	6689	5.48696	0.88912
969	47.256	-45.747	118.454	4007	9561	20015	7.14094	1.56078
970	60.527	-40.503	112.896	9404	9913	8453	6.74933	1.18909
971	85.522	-36.021	159.49	13165	13083	10075	8.16027	0.97983
972	42.884	18.879	160.449	7995	17797	13123	7.50082	1.9193
973	-35.139	-17.366	181.588	7013	1302	8317	2.62663	0.82901
974	-17.538	-13.614	189.288	18160	913	4106	3.4365	1.64103
975	72.137	-5.744	136.694	14712	5475	1298	3.68631	1.10304
976	84.227	-10.832	128.499	17125	17002	17044	4.31181	1.78649
977	12.294	-62.548	179.097	19585	19428	19584	2.76524	1.56924
978	-12.97	-25.034	191.144	16305	4262	4128	3.90287	2.67239
979	-10.393	-42.735	155.278	14463	15963	12491	2.2572	0.51822
980	9.789	28.858	171.568	10527	9480	17456	4.58539	1.74237
981	68.962	15.686	153.552	15294	15285	4184	4.41506	0.87453
982	49.587	-40.124	109.857	7720	7941	9440	6.46759	1.1486
983	65.088	-37.633	115.063	4419	5218	1235	6.62643	1.16383
984	-32.652	-44.13	174.251	13766	17072	2407	1.79058	0.41706
985	9.613	2.204	191.369	6182	6911	15621	4.20843	1.85773
986	-20.593	-10.877	194.599	4408	17919	1570	2.02661	0.69564
987	51.108	-3.665	97.533	10337	1543	1711	4.61101	0.86804
988	-39.748	-7.767	182.405	16678	17178	15337	1.33548	0.64544
989	14.348	-47.575	129.647	19325	19169	9141	3.8829	1.45465
990	72.968	-4.164	140.821	11479	10817	2014	3.81254	1.14295
991	50.241	17.497	149.417	1760	10909	6304	4.9253	0.92575
992	25.353	-51.912	189.979	4527	8284	9027	4.36312	1.29339
993	41.506	-64.949	195.897	7538	3679	10972	3.08075	1.50218
994	67.002	-27.226	121.388	13441	13388	10399	6.32059	1.09537
995	43.924	-51.544	120.163	2256	11583	4390	7.59977	1.57257
996	43.475	22.163	168.765	9874	1731	974	4.72473	0.88692
997	1.964	-58.208	166.524	17173	1892	6848	2.75007	1.34396
998	-40.834	-34.715	161.526	12480	12134	13882	1.88638	0.30367
999	83.525	-26.877	146.672	2007	2221	5912	6.8786	1.22746
1000	-23.596	-45.694	175.221	19779	2487	19643	2.01111	0.72283
1001	46.63	16.571	159.994	18958	2334	18774	6.91111	1.53779
1002	-46.362	-19.926	180.378	14198	21224	21139	1.2874	0.63588
1003	58.749	-37.121	188.089	8013	13366	678	6.21727	0.77346
1004	80.674	-51.59	166.66	5507	7047	2198	8.90996	2.28925
1005	13.131	-45.311	127.813	19209	19124	19123	3.52751	1.12461
1006	0.236	-8.826	196.496	9570	20819	20894	6.78664	2.76295
1007	70.439	-9.041	108.708	23305	23257	9038	4.60541	0.56089
1008	9.07	-57.671	195.223	8257	20572	20620	3.17463	0.96571
1009	70.975	9.784	122.412	9428	10166	8750	3.32997	1.50946
1010	-12.662	-47.24	140.755	17297	7912	17170	2.16883	0.39031
1011	-17.443	-49.318	174.289	1905	413	8483	1.87481	0.6591
1012	13.567	-63.053	177.972	13638	3455	8382	2.73873	1.68802
1013	43.783	13.605	170.179	23373	23266	23265	7.93201	2.08322
1014	58.965	-43.959	114.541	16397	7873	15914	6.94121	1.26573
1015	21.279	37.176	168.77	4935	8295	7022	4.22493	1.60111
1016	-13.846	-53.599	191.538	5195	22783	22800	2.18554	0.45457
1017	76.475	-5.9	174.507	3555	13043	623	8.29307	0.79397
1018	-4.696	-27.765	191.594	15922	4	4269	3.54606	1.5981
1019	40.389	-42.761	108.59	3251	9369	4270	6.18166	1.26941
1020	-49.695	-24.704	159.472	16270	16146	7258	1.69216	0.32089
1021	59.492	-54.606	135.408	10470	15679	9638	9.06607	2.30463
1022	62.27	-10.498	103.834	9356	11030	11027	5.10232	0.71745
1023	43.695	-55.929	154.33	1012	3189	10977	6.32701	5.02589
1024	-20.756	-40.263	185.671	9739	9092	5544	1.77294	0.63619
1025	42.087	-4.908	95.175	2184	10838	2489	4.77736	0.91591
1026	45.85	-18.151	195.043	572	14283	10740	7.09243	4.67321
1027	54.892	30.314	137.576	11904	11888	11903	2.26502	0.1709
1028	57.622	-29.782	186.966	17099	12008	15125	5.97831	1.00962
1029	78.485	-60.457	155.607	14106	13888	3342	8.83681	1.08253
1030	39.677	-22.401	97.77	17549	14080	4902	5.25083	1.57385
1031	88.562	-27.491	169.473	7126	17174	17263	7.8868	1.00574
1032	-20.463	-11.147	186.479	12312	3208	11891	3.04928	1.47713
1033	-12.262	-15.888	190.821	15662	15655	325	4.03317	2.39281
1034	60.809	-9.517	102.251	5906	5917	905	5.05326	0.77591
1035	-41.899	-6.472	180.647	12224	12225	12208	1.29642	0.63567
1036	-7.377	-28.581	197.936	19525	9420	19374	2.89352	0.78649
1037	68.128	2.462	156.685	9397	22376	22552	5.9083	0.72707
1038	76.306	-55.773	186.192	20464	4395	13008	9.98952	2.49855
1039	8.448	-26.723	204.372	17529	2769	14641	4.89134	1.99016
1040	0.549	-55.77	165.621	14154	15795	15924	2.56626	1.21919
1041	83.515	-6.629	128.451	8905	4237	1049	3.84995	1.68275
1042	22.548	-57.292	144.963	18303	4988	5029	6.35499	3.02615
1043	46.837	11.023	117.054	19768	2211	19558	3.17047	0.71109
1044	33.951	-63.148	195.957	2281	19791	19790	3.02167	1.00965
1045	70.919	-18.913	110.817	1430	6269	6296	5.44668	0.68941
1046	-41.755	-7.39	180.925	10830	3884	11073	1.30056	0.63603
1047	71.138	2.034	153.507	18880	18782	18593	5.91625	0.73289
1048	52.485	15.147	180.141	5870	7593	9115	5.67661	0.8058
1049	62.522	2.514	124.615	2058	14961	2074	3.55015	0.7784
1050	-43.429	-7.951	179.877	16950	16900	6946	1.30283	0.63315
1051	72.68	-38.849	122.119	14786	15439	3061	7.15456	1.32137
1052	16.664	-55.996	137.552	4649	7507	18662	5.55377	2.01264
1053	-39.402	-20.986	179.671	17987	21850	21950	2.6945	0.83384
1054	56.483	-54.843	135.282	21164	8310	5249	8.52527	2.10372
1055	92.34	-28.493	149.165	20431	9244	20430	6.63284	0.8352
1056	78.298	-4.475	114.227	21793	21727	21524	4.21527	0.66716
1057	40.589	-53.507	130.25	13195	10353	3811	7.90655	2.11296
1058	31.177	-58.93	169.731	83	8041	6948	3.6212	2.33384
1059	54.831	-12.211	107.415	9491	17469	14384	5.8092	1.14977
1060	33.479	-65.882	177.227	19637	5074	40	2.87379	2.00727
1061	67.954	15.967	159.097	12430	4341	12427	5.87082	0.62094
1062	37.548	20.977	159.536	13129	18698	18419	7.94579	2.58398
1063	57.172	-11.434	109.687	13081	4979	5279	5.90672	1.11417
1064	39.752	-53.592	137.325	19667	9676	19589	7.05247	2.71883
1065	36.112	-20.373	100.33	7764	10252	3918	5.04503	1.43405
1066	73.186	-27.197	171.741	9537	20396	20453	7.54003	1.72985
1067	-22.184	-24.34	188.545	10859	11395	10829	3.39221	1.39851
1068	67.756	-20.399	122.638	18585	18759	1381	5.15488	0.74441
1069	57.414	-22.6	186.31	18883	18744	18934	6.62555	1.22793
1070	68.369	-19.883	187.998	6151	4903	19634	5.8274	0.61185
1071	43.481	20.786	150.306	1382	1832	7831	6.10762	1.39562
1072	16.559	-55.338	133.568	9849	9349	9286	4.94083	2.1265
1073	-4.245	-41.837	188.469	20085	19875	12775	2.19324	0.53495
1074	39.791	22.693	146.318	22253	6796	13307	5.27249	1.19279
1075	66.62	-59.188	167.141	6552	22039	16199	3.62214	0.84943
1076	44.243	19.751	153.412	11225	11222	4879	6.42567	1.48576
1077	57.136	0.442	102.173	406	17889	17878	4.21804	0.90257
1078	61.91	22.694	165.862	2335	3411	1520	5.52455	0.63447
1079	31.842	-65.846	167.321	21710	18696	21649	4.77838	4.98168
1080	57.272	27.619	131.138	5715	11277	2585	2.44816	0.33382
1081	12.224	27.662	172.125	20525	20524	20577	4.73523	1.80972
1082	53.975	-7.302	107.885	2929	8305	20469	5.39023	1.0422
1083	56.026	21.702	172.714	11708	1053	11530	5.77983	0.61785
1084	73.781	-36.078	121.082	8605	9186	15647	6.92517	1.13797
1085	-20.844	-40.855	159.049	15714	14018	1908	2.12608	0.64067
1086	-45.052	-27.813	164.08	5484	17223	17177	1.97737	0.49897
1087	-34.827	-6.056	183.525	2765	15184	16442	1.66474	0.73153
1088	60.191	26.255	142.073	2049	19674	19938	2.65525	0.37111
1089	26.215	-66.128	195.328	12717	15944	15597	1.8834	1.77421
1090	35.283	-15.703	201.48	14213	12650	12500	4.67498	2.63906
1091	36.218	30.834	146.465	5885	15643	1178	3.28817	0.52249
1092	45.372	11.658	114.438	378	7521	18805	3.39984	0.74253
1093	74.055	-67.581	171.576	12223	13560	7942	5.20325	1.3516
1094	-24.935	-43.436	184.16	7948	16300	4268	1.82786	0.49324
1095	-10.379	-53.444	175.443	19927	887	11547	2.38611	0.52261
1096	79.885	-13.407	117.263	9971	5125	5283	4.87027	0.54625
1097	40.218	22.759	142.856	13908	13868	1080	4.04918	0.75557
1098	30.43	-42.576	201.762	18252	3498	17638	6.06577	2.90992
1099	-4.062	-51.784	163.153	9007	10145	10954	2.43913	0.93757
1100	38.979	19.432	121.912	9004	4492	14306	2.60927	0.75808
1101	-40.071	-26.043	177.983	9675	15955	15733	2.59621	0.81462
1102	-25.626	-49.921	162.986	7486	8170	13872	1.98429	0.3638
1103	45.707	-34.603	108.058	7375	5312	2145	5.30343	1.18163
1104	89.045	-19.557	156.981	12115	17579	18068	6.85189	0.69115
1105	-13.593	-19.935	191.54	2526	9152	8195	4.09898	2.7502
1106	87.048	3.363	121.484	12160	11945	12613	3.64878	0.9198
1107	59.141	24.474	152.055	7972	6924	10398	3.59739	0.63415
1108	6.413	-42.296	189.988	1466	6446	5617	3.31904	0.92326
1109	-40.025	-30.462	181.234	11874	11835	2671	1.34253	0.65074
1110	7.655	-44.052	124.811	23762	23738	13022	3.37154	0.91046
1111	86.857	-16.879	165.499	2953	2478	7294	7.79641	0.9861
1112	66.202	-66.422	187.14	21320	11114	8538	5.2555	1.36692
1113	83.476	7.874	119.371	13154	13038	528	3.51921	1.03715
1114	32.437	10.416	178.153	11537	20698	18026	5.86148	2.45044
1115	62.751	-12.106	120.326	4254	13938	15179	4.39486	0.74408
1116	77.385	-54.617	166.906	4154	500	20505	7.62899	2.17028
1117	53.398	-24.95	111.241	15319	14411	14412	5.22538	0.83729
1118	21.654	-57.756	181.727	21551	9657	1583	2.71593	1.19666
1119	54.943	-29.73	195.272	3275	14660	5493	6.12161	0.92693
1120	69.646	3.618	151.943	703	10745	3043	4.71814	0.99774
1121	14.181	-45.667	202.363	15732	15536	6335	5.11769	1.90248
1122	29.369	31.423	147.851	9159	23767	6957	5.57754	1.46434
1123	47.154	4.397	98.988	15712	14928	428	3.9588	0.70264
1124	28.786	-65.382	195.423	13776	13300	1353	1.95759	1.59214
1125	41.689	29.229	141.115	22220	22140	1595	2.95699	0.40474
1126	56.303	11.228	112.556	22212	18178	21957	2.88855	0.64628
1127	70.106	-10.759	166.859	4148	14965	13120	8.22544	0.76992
1128	27.636	-52.851	197.76	20522	20404	10559	4.3363	3.00723
1129	72.542	-3.858	139.906	10019	9447	7442	3.62062	1.13077
1130	54.538	-3.286	179.53	13559	9513	10876	6.597	0.552
1131	59.667	-9.353	101.379	321	12017	11919	5.01468	0.80154
1132	54.069	29.73	139.454	11034	11780	11791	2.208	0.123
1133	-19.89	-54.535	182.292	7903	7586	4939	2.13875	0.33838
1134	-38.107	-36.827	173.476	9333	8938	8956	1.55659	0.47084
1135	49.579	-47.947	190.397	20304	20240	10289	4.88395	1.01664
1136	-16.205	-48.213	165.572	11346	7470	9949	2.11825	0.75577
1137	72.714	-18.518	126.914	9313	11133	6564	4.278	1.026
1138	33.999	-59.79	172.715	14206	12490	16372	3.59729	2.26151
1139	-41.355	-25.807	185.256	18233	8515	5088	1.34797	0.66772
1140	42.343	-38.622	108.728	13429	5942	10690	5.50089	1.26286
1141	43.006	-21.394	197.063	9220	1947	4747	7.94406	5.68558
1142	46.317	-46.759	114.236	15365	16119	16172	6.88856	1.28312
1143	72.036	-6.681	132.663	1528	15183	15238	3.5007	0.86897
1144	-15.631	-55.203	180.213	11170	16102	12136	2.2425	0.40054
1145	58.61	-55.247	158.581	8539	14037	1045	6.8468	1.64718
1146	42.14	-54.848	128.927	10917	12353	13983	7.72809	1.86467
1147	-51.514	-20.115	172.056	5451	6217	6227	1.4329	0.59646
1148	-25.03	-37.513	147.175	6129	9742	2086	1.8915	0.29264
1149	72.228	-68.28	170.223	5935	11266	11271	3.85983	1.12959
1150	38.191	6.907	190.579	477	18750	18816	2.89118	0.80916
1151	39.909	24.378	140.7	20245	20172	20112	3.35791	0.51213
1152	19.418	21.731	160.58	15154	3418	662	6.07235	3.00719
1153	-37.475	-31.942	166.395	1541	642	4206	2.1924	0.65909
1154	56.691	-53.94	133.439	6294	15577	14457	8.31378	2.00982
1155	22.975	35.313	158.842	16703	11581	16261	5.23827	1.43945
1156	15.153	-47.791	137.059	12218	14641	10492	4.69024	1.63604
1157	34.29	23.507	154.15	3787	7364	15711	7.07888	2.26211
1158	85.912	-8.481	152.517	21683	19592	21682	5.74966	1.15545
1159	29.355	32.635	147.781	20845	1171	20833	5.20028	1.28072
1160	18.794	-44.02	202.382	2906	1050	5312	5.66297	2.26416
1161	38.859	21.171	123.063	18145	1174	3688	2.52142	0.63162
1162	-19.726	-47.166	167.605	14909	10265	2880	2.11542	0.76431
1163	90.087	-30.597	167.499	17773	17729	12986	7.723	0.92434
1164	52.22	25.912	157.609	5114	14535	11135	3.7378	0.6564
1165	36.563	-57.065	141.311	13248	3137	462	6.51652	3.21952
1166	54.182	13.481	122.237	6509	2467	4724	2.90556	0.60487
1167	-13.88	-54.335	178.553	1817	20111	2362	2.31086	0.45231
1168	86.528	4.28	121.744	9239	6999	12408	3.56348	0.95509
1169	-26.279	-36.21	145.264	11256	11125	10137	1.8635	0.25415
1170	-2.924	-4.021	194.566	5141	11817	3410	5.39205	1.73931
1171	-3.115	-50.037	159.846	96	4334	21331	2.63331	0.80837
1172	-37.701	-18.609	188.183	1000	16446	17492	1.34386	0.66896
1173	18.112	34.184	157.851	5157	14159	2309	5.0912	1.66808
1174	-3.529	-55.9	179.155	14670	15948	9679	2.44621	0.64484
1175	50.834	24.924	161.786	13790	12097	10690	4.11497	0.72214
1176	46.475	-75.298	193.882	21342	21181	6170	2.55178	0.5067
1177	69.086	-10.269	107.982	20480	2477	1106	4.90763	0.61393
1178	66.04	19.315	120.842	2043	18617	19687	3.04186	0.6612
1179	7.752	-59.324	184.368	5448	4659	7854	2.67151	0.98451
1180	54.827	-57.831	196.461	22295	2666	19633	5.13016	3.45197
1181	87.26	-13.298	158.313	12193	15860	12162	6.9221	0.80428
1182	37.462	14.729	131.339	21568	14310	21558	2.65999	0.54083
1183	68.446	4.936	146.693	9637	10252	7764	3.02448	1.26011
1184	56.373	-35.851	188.316	12253	2984	14274	6.09369	0.89381
1185	37.413	18.902	165.135	11761	11716	11759	8.35686	2.60769
1186	82.993	-43.643	165.763	220	14765	1895	10.33022	3.45096
1187	77.083	-38.343	180.104	1168	10766	1145	7.1913	1.56879
1188	-18.273	-48.907	172.466	14772	14744	7171	1.98013	0.70825
1189	-48.281	-24.124	166.804	4373	6762	5002	1.76998	0.5621
1190	-25.279	-42.066	164.451	18241	5376	10383	2.20344	0.74998
1191	57.231	-6.49	99.78	8701	7248	7377	4.75658	0.83957
1192	61.303	-61.518	177.763	14077	11043	13980	2.87896	0.69076
1193	58.544	8.332	161.48	17659	8955	17625	5.75656	0.78152
1194	32.961	2.17	183.76	16979	11400	15022	3.08702	1.28186
1195	-46.089	-27.56	176.018	5361	10950	2087	1.29792	0.59414
1196	-12.055	-44.694	140.028	23453	15486	17052	2.0692	0.34548
1197	30.948	-25.077	201.05	10683	23342	23240	6.43456	1.5807
1198	72.482	-14.661	161.541	39	14665	2474	7.28485	0.73685
1199	-24.889	-51.991	177.868	20108	20036	19888	2.09368	0.36807
1200	32.046	18.111	129.291	19268	19015	2369	2.43332	0.59786
1201	8.433	-53.238	146.67	23009	22933	22785	6.4111	1.55014
1202	44.801	-55.128	149.021	8345	239	2386	6.46129	3.66082
1203	-28.403	-21.883	183.579	10821	11228	11233	2.97816	0.92367
1204	-33.518	-15.407	181.534	18833	18663	18638	2.55155	0.82055
1205	53.49	-43.338	189.533	15554	450	15515	6.02921	0.90661
1206	56.585	10.157	109.361	683	3733	17049	3.15797	0.73349
1207	52.732	-53.668	126.699	11020	10150	11010	7.53318	1.67081
1208	-37.527	-12.468	180.553	19449	19417	4183	2.17007	0.75627
1209	48.642	12.782	107.854	6115	9391	5951	3.62747	0.72791
1210	77.245	-51.802	169.506	15876	927	3864	7.57221	2.51231
1211	5.338	-46.81	131.196	12987	12416	12214	3.89713	0.88121
1212	71.336	-6.424	154.305	1144	15191	16710	5.89283	0.73071
1213	-5.984	-55.213	168.458	7393	9751	5164	2.50551	0.90691
1214	33.856	29.604	174.877	20213	18738	20374	3.50021	1.72536
1215	55.427	-69.26	196.059	9396	1849	8544	4.04153	1.67989
1216	59.713	5.702	108.216	8396	8295	4935	3.69616	0.87135
1217	43.045	-57.053	161.406	4515	14299	3531	6.01151	5.6107
1218	82.183	-6.464	118.36	22867	22791	22710	4.33218	0.78081
1219	56.802	-31.942	195.568	6592	16987	16927	5.33078	0.94333
1220	61.439	-10.6	102.889	10672	4866	11340	5.11307	0.75328
1221	41.657	-51.244	197.531	15811	15739	300	5.10931	3.16812
1222	72.506	-15.029	108.738	14758	6631	14764	5.10872	0.71072
1223	-8.978	-44.881	157.573	3695	13893	10362	2.25899	0.58966
1224	84.915	-49.195	162.591	7915	7216	7882	8.99218	1.63291
1225	58.512	12.707	177.283	5693	7834	17474	6.97277	1.022
1226	85.488	-61.931	163.066	17228	6821	17142	8.16247	1.78916
1227	45.391	18.681	155.731	5376	1303	10390	6.56315	1.53628
1228	63.37	-38.55	195.419	7947	10878	2165	6.63696	1.44801
1229	45.913	19.194	124.879	13546	12399	1497	2.68008	0.57456
1230	71.652	-40.227	184.361	869	3997	15939	6.93568	1.44172
1231	74.702	5.38	132.835	4024	1383	13862	3.05319	1.32308
1232	53.043	25.615	157.832	12036	17115	5101	3.77534	0.68034
1233	-20.594	-7.525	193.389	5919	15254	5954	1.725	0.855
1234	55.072	23.551	129.353	21256	21190	2791	2.60267	0.37653
1235	45.396	-73.23	198.424	8130	5441	8436	2.55128	0.73171
1236	34.143	25.959	179.616	15140	15109	14687	3.54663	1.74805
1237	37.391	-50.573	196.598	4259	6482	7144	5.08599	3.44265
1238	0.04	-58.217	178.673	3055	4500	491	2.5634	0.83794
1239	15.6	21.07	182.857	1832	4815	7831	2.66715	2.76624
1240	85.557	-37.339	157.022	23427	23380	23270	7.74057	0.65709
1241	10.377	-54.206	147.15	21775	13930	21581	6.56444	1.53005
1242	70.68	-17.548	109.786	20813	20729	20770	5.37506	0.73486
1243	11.147	-45.048	121.173	3326	14942	14983	3.30197	0.87183
1244	2.6	-38.715	199.261	21140	21157	14569	3.25696	0.99848
1245	-19.741	-14.961	194.289	19800	13460	1195	2.14224	0.62011
1246	62.712	-27.061	109.542	3165	11906	5941	5.82237	0.79089
1247	77.73	-29.007	122.069	14044	18090	22866	6.59054	0.96526
1248	24.877	32.706	174.623	7196	9364	7761	3.49682	2.18845
1249	23.966	-63.663	173.596	6358	8930	1226	3.18909	2.57415
1250	75.001	-20.268	112.216	16510	14571	846	5.60394	1.02928
1251	33.057	-66.161	173.981	21240	21166	13780	3.54112	3.06401
1252	-40.578	-31.651	170.201	10435	9094	10418	2.26321	0.70651
1253	53.411	3.684	101.648	9291	12507	4462	4.00149	0.80213
1254	7.178	32.335	169.608	16529	15532	507	4.54215	1.58525
1255	-36.796	-32.465	161.266	12719	20154	20088	2.06804	0.5356
1256	70.176	10.824	131.892	959	10627	3374	2.865	0.318
1257	69.177	-46.27	126.064	11129	7826	11109	8.15013	1.83628
1258	71.864	15.346	140.733	13284	13259	13176	1.87495	0.96428
1259	17.949	4.384	183.779	4239	10486	14032	3.24971	2.6777
1260	64.955	-28.371	194.654	11172	11139	11137	6.23443	1.02847
1261	21.087	-45.177	202.463	20534	7458	1546	5.52383	2.39762
1262	-38.441	-12.054	183.907	4282	11719	11091	1.39983	0.65203
1263	27.713	-63.683	154.997	1387	11832	304	5.85701	5.08659
1264	-42.078	-33.813	168.287	4889	14332	14343	1.62346	0.33544
1265	15.103	-52.726	125.079	12424	15110	3619	3.76788	1.29974
1266	96.936	-31.743	144.114	19185	19717	20909	7.01833	0.66634
1267	45.277	17.713	124.163	9302	12306	11963	2.72136	0.62403
1268	-39.681	-14.169	179.537	21272	3183	7376	2.1854	0.75736
1269	20.424	-58.281	178.465	9677	9674	18173	2.69593	1.32743
1270	-39.525	-16.971	184.961	3963	10724	1757	1.33829	0.65934
1271	44.722	12.687	130.382	16843	2054	11245	2.90845	0.57293
1272	-13.529	-55.643	185.342	11244	3842	11238	2.22143	0.39544
1273	-45.489	-19.998	181.189	14942	352	14941	1.29004	0.64009
1274	-49.523	-17.048	175.122	9883	13120	15036	1.39596	0.63929
1275	73.53	-32.301	190.428	2115	4587	12811	7.33928	1.46959
1276	43.471	-54.446	190.384	2905	7738	11111	3.67695	0.84471
1277	45.128	23.24	135.524	9584	9806	7641	2.63698	0.29114
1278	34.974	-69.046	195.989	5345	19153	8657	2.3137	1.1087
1279	44.379	-68.222	196.45	12286	12486	1962	2.67891	0.90679
1280	-26.824	-11.692	188.146	14025	3180	4745	1.98418	0.81879
1281	27.168	-62.345	150.781	11768	1922	1845	6.20538	4.44633
1282	30.131	31.298	165.418	10140	4441	2188	4.3716	1.2213
1283	49.593	-7.045	103.876	12145	8377	5171	4.51323	0.86581
1284	-29.174	-14.932	189.542	2589	20348	6520	1.64517	0.72152
1285	56.478	10.918	132.65	17979	11047	12633	2.88105	0.62167
1286	5.77	-29.335	191.446	6255	1746	16638	3.651	0.465
1287	-39.918	-24.462	186.865	6591	13351	17917	1.39925	0.68128
1288	63.539	-49.275	125.515	21281	21304	542	7.57514	1.57988
1289	10.344	-4.305	193.514	12343	5557	13113	3.9202	2.55997
1290	63.924	22.806	146.12	14896	16781	6887	2.8778	0.60521
1291	21.935	2.587	184.611	16132	3296	11253	3.9552	2.49844
1292	64.109	-21.128	181.969	16815	4130	2584	6.60777	0.9865
1293	43.016	-43.228	190.882	2518	6870	4030	5.41032	1.38638
1294	53.314	-70.456	180.562	6800	13933	4151	3.01892	0.75112
1295	47.683	1.452	96.587	10840	15802	7604	4.21656	0.71933
1296	65.297	-60.015	178.335	8565	1674	4857	3.0966	0.54356
1297	44.265	8.828	104.505	14461	943	4519	3.86544	0.65564
1298	58.967	-20.596	113.784	6936	5536	8798	5.4728	0.61668
1299	60.35	2.6	167.996	5756	2860	1613	7.2633	0.95065
1300	-48.233	-27.512	165.379	9086	16545	10277	1.51745	0.41643
1301	42.13	26.916	157.621	5120	9034	10728	3.72547	0.69171
1302	-28.087	-38.614	179.708	17962	4625	4761	2.0602	0.70415
1303	44.178	8.395	102.303	1048	13636	15478	3.87496	0.65832
1304	-48.251	-25.276	158.912	1530	8712	17315	1.77586	0.31225
1305	84.72	-60.552	170.292	9935	12144	12072	10.53554	2.54025
1306	44.05	21.477	139.017	922	4147	15674	3.37888	0.48902
1307	51.262	18.474	177.76	5252	10754	963	5.78844	0.72216
1308	54.409	-52.464	124.335	13089	12764	13046	7.42538	1.56219
1309	-39.148	-9.616	179.86	15299	15288	5793	1.77725	0.7006
1310	56.498	14.22	178.359	20179	19976	20178	6.42434	0.96474
1311	-33.757	-42.559	163.243	17324	7477	14011	1.87551	0.27204
1312	4.651	-52.859	182.664	834	5541	668	2.78847	0.53147
1313	7.654	34.897	171.747	361	3051	4080	4.20858	1.66604
1314	12.508	-44.684	126.613	22058	22055	21970	3.44186	1.01572
1315	-37.122	-39.112	162.387	18505	18357	1818	1.88638	0.2933
1316	-7.53	-30.845	190.861	20647	19397	8488	2.93727	1.44909
1317	56.65	-56.565	196.731	18110	652	913	5.58347	3.88222
1318	18.463	-59.359	165.277	19006	787	21069	3.6233	2.8667
1319	19.831	-52.252	142.113	15979	15748	7954	5.96875	3.2335
1320	83.677	-3.595	126.52	20347	10566	243	3.55813	1.17236
1321	71.753	-28.12	114.286	3431	6231	1586	6.01038	1.10076
1322	67.198	17.906	153.513	21100	8835	21096	4.11165	0.82709
1323	3.753	-59.602	168.938	10691	15911	12220	2.87611	1.52556
1324	51.118	14.914	180.579	19493	8810	19410	5.29799	0.78157
1325	-12.618	-32.288	197.146	527	18023	145	2.37386	0.52956
1326	16.033	-52.288	126.743	9670	11797	11850	3.89508	1.42952
1327	46.522	6.476	116.286	19513	13068	19359	3.55812	0.68518
1328	62.221	-9.73	103.763	13378	20788	12859	5.03573	0.7236
1329	84.754	-19.645	171.014	15589	7594	15588	6.55506	0.86703
1330	-1.258	15.137	180.778	23419	853	448	3.69711	1.55697
1331	2.924	-49.844	146.173	20676	12840	20631	5.21877	1.7958
1332	80.423	-0.484	127.229	4899	6457	3534	3.35493	0.80514
1333	26.632	-36.645	203.392	802	19521	20879	6.62481	1.84376
1334	82.858	-8.924	170.033	4110	14608	21500	9.0765	1.107
1335	14.921	-54.129	134.371	20402	20285	4395	4.94896	1.78095
1336	52.134	1.973	99.281	278	9387	3082	4.13609	0.78939
1337	-33.627	-31.33	169.556	8351	8349	6962	2.29241	0.73655
1338	47.29	19.988	176.694	10571	11256	10449	5.42401	0.7923
1339	-26.058	-50.763	173.913	3269	12094	18081	2.06628	0.38786
1340	5.754	17.856	184.761	13250	20533	19871	3.05841	2.35787
1341	51.646	14.579	180.691	2208	1278	8403	5.30953	0.79591
1342	65.306	1.214	114.751	16164	2755	4297	3.77792	1.02914
1343	59.977	-21.296	115.407	2405	19453	20541	5.49272	0.53144
1344	-33.501	-8.012	184.214	22652	22621	14049	1.88086	0.79546
1345	59.991	-14.774	102.26	13880	17278	2126	5.41557	0.78161
1346	35.264	24.111	149.74	19009	9871	17613	6.43357	1.75509
1347	-40.587	-10.886	182.321	7193	6216	7177	1.32537	0.64361
1348	55.462	11.857	179.815	14912	14893	4985	6.34572	0.98021
1349	68.807	-50.42	187.435	10105	8916	5050	5.50764	0.81231
1350	-36.693	-40.266	163.659	9474	9884	9122	1.85916	0.26894
1351	-3.86	-52.803	165.131	20507	20521	4395	2.34843	1.00157
1352	26.733	-64.609	177.431	7629	9435	9268	2.80399	2.53514
1353	34.812	-61.371	154.13	20177	3009	20176	5.68821	5.43523
1354	41.412	-22.817	97.767	16677	17313	6568	5.23757	1.58551
1355	70.69	16.884	137.752	3411	6290	4517	2.0019	0.58808
1356	81.518	-26.917	126.704	6971	11181	828	6.49514	1.06232
1357	44.864	-27.515	99.172	15569	12099	5264	5.24008	1.33015
1358	37.047	19.691	163.429	11990	12744	12712	8.34541	2.70471
1359	74.887	-37.465	123.648	21125	2895	10149	7.37624	1.43033
1360	86.263	-9.037	151.392	1482	16423	12128	5.61162	1.2099
1361	34.181	20.307	183.414	6201	14699	2954	3.46088	1.61214
1362	33.67	15.519	128.259	11631	22592	22504	2.51574	0.70302
1363	16.635	-58.628	168.487	20613	20570	6368	3.28605	2.32711
1364	49.811	-3.714	181.059	5521	113	8607	8.11447	3.5307
1365	40.028	-42.479	108.603	6732	14872	12692	6.11649	1.26927
1366	15.766	-51.33	128.919	19288	13246	19204	4.02658	1.58772
1367	37.057	-25.093	99.44	13176	4763	13087	5.12915	1.50519
1368	62.621	0.763	108	17855	16745	17835	4.07137	0.85021
1369	16.564	-50.291	152.039	18313	12696	18199	6.07359	2.57515
1370	35.782	-34.902	189.648	10408	3507	6742	6.51392	1.6337
1371	-48.276	-21.338	176.578	12558	20881	19215	1.30956	0.61917
1372	9.148	-45.427	202.798	19097	1153	19096	4.3805	1.56435
1373	-17.032	-55.493	178.898	18919	9125	5064	2.2416	0.3829
1374	-27.085	-49.243	170.357	8259	16132	11253	2.00723	0.36069
1375	-11.777	-52.892	167.185	16558	7175	16513	2.29192	0.62545
1376	72.297	-15.289	126.321	14822	14813	682	4.41694	1.27527
1377	43.179	1.605	95.393	20837	20800	20716	4.23667	0.67706
1378	19.867	-49.02	190.374	10023	10167	4842	4.3101	1.91969
1379	29.099	-64.421	195.623	4070	7068	866	2.082	1.2
1380	35.141	32.842	167.403	16594	389	4733	3.92107	1.31573
1381	63.809	22.92	138.857	3582	3653	5682	2.33466	0.42383
1382	34.098	-58.47	183.294	21515	21464	11729	3.2402	1.18128
1383	47.541	-54.468	146.93	2289	10220	10252	6.55211	3.29997
1384	38.16	31.026	165.97	20952	20886	18571	3.968	1.0203
1385	4.744	-44.772	129.042	18031	5281	12444	3.52469	0.89501
1386	79.301	-52.357	185.692	424	9815	1021	11.48751	2.70405
1387	9.105	-61.859	172.101	6057	6062	792	3.01023	1.80748
1388	4.659	-51	184.672	13235	3879	7162	2.82608	0.50045
1389	53.899	-34.034	195.869	13637	17921	4237	5.22173	1.30733
1390	30.255	-55.393	187.776	17223	17098	17177	3.85124	1.12334
1391	53.181	-25.355	101.188	20917	19742	20883	5.48706	0.85254
1392	-27.144	-47.806	163.986	12307	13176	13162	1.94454	0.32846
1393	45.629	-48.424	115.564	9047	9691	18013	7.00649	1.33357
1394	44.748	3.549	112.279	12923	20737	20784	3.92467	0.61758
1395	-11.435	-29.879	197.478	6064	18522	8663	2.42952	0.58192
1396	32.678	-53.797	196.614	7601	8999	9433	4.35464	3.32528
1397	9.58	-49.987	133.24	869	15939	3940	4.53155	1.25173
1398	0.664	-48.333	142.684	19149	18907	19082	4.22835	1.05785
1399	-27.347	-35.756	143.351	11964	11887	8849	1.85186	0.22501
1400	19.875	7.5	187.8	2762	11775	9827	2.52841	1.90338
1401	16.93	-20.54	202.096	18319	18092	1502	5.55329	2.20631
1402	48.747	-13.284	184.055	1395	5756	14884	8.95433	5.19926
1403	36.15	-64.546	160.417	15555	16301	16244	5.3097	5.6977
1404	85.617	-38.274	159.93	2716	10046	18355	8.07447	1.09605
1405	41.314	-70.588	196.54	16572	21097	21080	2.40409	0.76808
1406	-39.522	-34.982	173.782	17527	17532	1867	1.48621	0.47838
1407	-11.894	-43.582	140.519	19089	18911	19088	1.98053	0.32117
1408	37.07	-58.86	182.095	17875	6825	17869	3.16846	1.17679
1409	12.287	-54.748	145.222	15739	5713	2994	6.74505	1.26033
1410	13.589	-46.317	127.475	1323	15670	14401	3.6045	1.11969
1411	64.685	21.987	145.401	18568	6220	8746	2.74848	0.66313
1412	84.108	-27.161	163.57	19312	19230	19277	8.703	1.182
1413	-6.323	-48.529	159.902	13177	13005	13106	2.32002	0.6915
1414	97.632	-33.583	144.51	20872	20839	19264	7.45241	0.7002
1415	45.055	1.485	101.519	10726	14821	5743	4.07441	0.71792
1416	-4.554	4.404	182.301	5347	5692	1726	4.04476	1.08794
1417	-28.458	-50.438	179.709	9786	7374	12770	1.92474	0.43498
1418	43.933	-44.978	197.502	23136	2715	4571	5.72495	2.86392
1419	-5.678	-51.857	173.812	14571	4858	846	1.99438	0.75742
1420	40.228	-33.684	189.676	2875	7784	18266	6.35721	1.78505
1421	19.315	-50.425	150.218	16351	16136	16303	6.34008	3.27643
1422	82.798	3.82	117.518	11142	11100	3459	3.78396	1.00357
1423	21.477	34.081	172.615	20933	9281	20829	3.84295	1.8807
1424	-2.928	-8.554	187.89	1263	8683	9567	3.645	0.807
1425	76.939	-14.694	113.679	8432	8401	2638	5.445	0.882
1426	90.469	-20.674	141.769	1884	1568	5996	5.52225	1.05105
1427	-7.592	4.497	183.816	21911	11578	21605	3.62563	1.13616
1428	-8.063	-51.552	172.507	13996	3475	13981	1.89682	0.72231
1429	47.113	8.494	101.907	20012	9527	8585	3.82379	0.69649
1430	56.902	-27.209	187.032	1509	2253	3310	6.26703	0.79839
1431	-34.592	-16.339	181.503	2241	8155	6968	2.55421	0.81834
1432	-18.503	-5.127	193.716	15650	5747	5728	2.18434	0.58542
1433	10.331	-53.275	143.02	4010	15012	2114	6.39841	1.23215
1434	57.28	-58.366	141.997	15938	7241	14679	9.17	2.24987
1435	59.6	-32.258	195.795	23601	23629	23524	5.47348	0.92541
1436	62.261	24.659	139.815	2194	19561	3179	2.47484	0.36215
1437	37.921	28.891	159.194	9844	7761	9556	3.91783	0.74842
1438	-10.61	-28.901	190.8	17445	17429	4322	3.49029	2.07823
1439	10.453	-37.939	204.68	14419	7138	4259	4.44182	1.53445
1440	68.28	17.107	149.433	17029	17028	9222	3.35731	0.9876
1441	25.992	30.123	152.736	5944	8416	344	5.62433	1.56094
1442	81.726	-63.047	165.515	1631	6789	14499	6.42824	1.80249
1443	46.018	-55.279	149.166	13757	11166	13533	6.41597	3.66879
1444	35.108	27.815	169.731	10497	11212	4092	3.71332	1.39956
1445	13.622	-49.694	122	22315	6552	16199	3.46765	0.98262
1446	68.515	19.054	136.711	14686	14807	17427	2.03734	0.46612
1447	53.201	-75.925	189.781	8287	7292	15713	2.59478	0.35968
1448	69.405	13.744	131.575	17890	3454	14465	2.712	0.495
1449	51.147	12.629	110.668	21404	14060	1005	3.19019	0.82728
1450	6.243	34.109	170.873	2098	5184	4122	4.38717	1.56733
1451	33.592	15.928	130.729	14686	5583	13834	2.48547	0.57872
1452	78.393	-45.779	132.745	10564	15384	15973	9.39158	2.37443
1453	49.091	-40.194	190.217	16685	12011	16603	5.96	1.2213
1454	41.399	-68.232	195.883	2320	1830	3885	2.48184	0.84566
1455	34.981	21.265	120.71	17414	9480	13216	2.52016	0.76684
1456	-26.275	-46.827	182.611	14890	14864	11849	1.84533	0.46505
1457	-38.496	-16.306	179.907	18433	18223	6060	2.48915	0.80146
1458	72.148	12.143	142.058	10426	10420	6761	2.08885	1.1036
1459	-18.142	-56.462	189.524	8738	12721	12683	2.11659	0.3871
1460	40.78	-16.515	98.942	4590	3620	15048	5.448	2.31
1461	-20.358	-34.363	187.638	2192	5272	1344	2.275	0.93923
1462	20.964	-47.877	201.478	19062	10336	1792	5.06929	2.17422
1463	-6.943	-52.28	195.042	5162	14583	11628	2.21664	0.62501
1464	12.575	-16.051	201.712	14269	14201	14263	4.46903	3.14884
1465	51.557	12.631	109.982	14157	5636	12886	3.23099	0.80172
1466	55.338	-47.326	117.465	15526	15471	2628	6.93894	1.29766
1467	21.506	-62.558	169.358	10820	8886	10621	3.62822	2.36544
1468	63.608	23.193	140.088	9273	12891	12305	2.39737	0.4302
1469	38.319	-54.834	142.406	2882	15467	15523	6.60181	3.2653
1470	76.193	-65.487	177.45	1541	4206	1372	5.63147	1.6128
1471	69.593	12.056	134.793	5290	7520	4514	2.48701	0.60951
1472	84.346	-51.132	143.396	1801	7724	9344	9.16238	2.03073
1473	-27.651	-16.135	190.843	2008	11951	17601	1.7571	0.66634
1474	34.173	-50.66	196.55	10513	18371	5784	5.12776	3.98317
1475	-1.7	-57.444	177.208	4465	8362	2270	2.52752	0.79748
1476	67.325	-53.764	135.12	16865	17382	16978	9.733	2.27229
1477	89.226	-26.976	164.316	16222	2134	1116	7.64457	0.91935
1478	56.82	-11.129	100.348	15907	14401	554	5.15171	0.81385
1479	33.386	-39.197	202.392	6137	18280	18135	6.15278	2.66536
1480	43.705	-27.494	98.792	5176	13652	5101	5.16935	1.37835
1481	84.349	-58.753	176.627	20139	1317	9475	10.05741	3.39141
1482	-2.12	-51.308	198.274	6441	20021	19943	2.49919	0.72951
1483	20.396	24.401	170.892	22177	2815	19379	5.77303	2.94436
1484	55.054	-0.085	99.815	2185	17765	17800	4.2894	0.85908
1485	28.438	21.458	181.085	20478	10576	20533	2.88263	2.36124
1486	58.937	-19.991	185.124	17471	4906	17508	7.15941	1.35902
1487	47.913	-64.549	166.757	4602	14161	17087	4.50215	3.32034
1488	-8.892	-47.723	195.362	18303	7610	18219	2.33503	0.6454
1489	68.358	-35.399	116.159	13508	6543	8783	6.55074	1.21468
1490	72.071	-8.699	109.388	1302	6899	8275	4.55091	0.54441
1491	55.242	-8.494	108.461	5073	10581	9172	5.50563	1.17656
1492	69.468	12.216	131.184	9887	775	8073	2.67	0.342
1493	58.823	-61.747	178.928	17513	17505	17419	3.02943	0.65402
1494	38.728	-67.764	179.395	10121	11795	17069	2.73575	1.44814
1495	-43.295	-26.464	182.31	20674	12630	20626	1.3065	0.62444
1496	53.755	4.253	176.126	13202	16729	8951	7.02369	1.3848
1497	23.024	-63.483	182.275	18818	18725	10478	2.42941	2.64943
1498	-10.621	-58.284	192.292	19522	19439	2098	2.16343	0.39977
1499	45.472	12.046	111.798	2607	8312	4936	3.49206	0.74109
1500	7.285	-56.943	190.073	10573	363	20110	2.84804	0.8035
1501	34.818	22.943	155.793	13025	7583	21284	7.44845	2.41543
1502	13.242	-59.872	195.142	7795	1586	7430	2.92828	1.11436
1503	28.765	-41.28	190.965	5255	14515	16655	5.95903	2.9112
1504	50.197	-31.137	102.541	11917	15244	15272	5.61146	1.07046
1505	22.23	37.347	167.622	16173	5864	7139	4.28932	1.53832
1506	-19.749	-46.935	179.787	16052	9328	18278	1.67057	0.56395
1507	53.222	-49.138	138.175	5640	14232	16288	9.02947	2.18631
1508	48.73	12.095	117.904	18720	18514	2255	3.02118	0.71213
1509	-37.405	-15.189	180.424	7857	5941	11912	2.30676	0.776
1510	57.54	-9.818	110.648	4340	10939	9772	5.52142	1.03239
1511	-20.095	-44.906	163.192	19572	19417	19233	2.17862	0.74487
1512	42.62	17.996	134.545	20615	20513	20614	3.01308	0.40571
1513	40.972	-31.298	102.995	11251	12054	3771	5.29676	1.29299
1514	52.171	-55.122	148.253	9704	20101	20100	7.19719	2.72614
1515	-14.65	-55.28	182.525	10542	11994	1863	2.23763	0.41907
1516	-42.331	-26.025	183.98	16346	12405	564	1.33144	0.64652
1517	16.286	-48.957	189.394	15631	15616	15600	4.11496	1.54577
1518	61.438	25.468	138.934	1190	5600	1699	2.44135	0.30771
1519	49.4	12.728	110.995	14543	2257	4974	3.34948	0.78618
1520	39.078	18.344	129.133	7997	17712	17798	2.58414	0.43312
1521	-46.194	-21.339	180.207	6774	8537	8577	1.27864	0.63052
1522	75.919	5.488	158.641	17942	18013	18157	6.6186	0.78183
1523	83.993	8.028	119.098	1458	9762	4690	3.56751	1.05434
1524	16.834	-26.527	202.604	429	10339	10346	5.90305	1.98039
1525	73.506	-7.777	134.452	2495	2475	11251	3.77245	1.35354
1526	-46.975	-22.537	178.328	5344	1069	5842	1.27508	0.6274
1527	56.266	-19.174	101.035	20571	20458	20457	5.35769	0.84971
1528	88.574	-34.801	135.574	17246	17281	17236	8.25324	1.60017
1529	78.106	-47.975	149.645	22576	5131	22231	10.01038	1.35991
1530	24.45	-7.217	187.377	494	15580	15226	3.70687	2.19833
1531	57.961	-41.092	111.307	15270	1141	13340	6.76774	1.19642
1532	9.238	-51.965	139.083	2157	12801	12596	5.76037	1.19177
1533	68.066	0.394	115.857	17048	7526	16941	3.83013	0.78891
1534	70.961	12.143	139.424	248	5528	1343	2.32488	1.04458
1535	56.303	-28.285	104.499	13896	13860	608	5.76456	0.8824
1536	17.747	-7.703	188.006	15018	15011	3415	4.86379	2.7031
1537	59.167	-25.75	115.111	1474	1643	19082	5.75115	0.77199
1538	-14.456	-47.423	149.783	253	13248	10745	2.23607	0.47645
1539	85.718	-18.776	129.244	12702	5633	2601	5.334	0.426
1540	-47.499	-21.268	177.929	16156	5744	12065	1.28672	0.62564
1541	40.643	-4.633	98.217	4446	10518	13448	4.63044	1.06001
1542	58.45	-76.286	188.029	21052	21043	13093	3.03123	0.56648
1543	95.53	-34.066	147.283	16216	1094	16186	7.52224	0.72808
1544	60.657	24.858	149.184	18038	6475	14286	3.36181	0.63457
1545	-11.411	-16.019	190.797	20040	19772	19969	4.22055	3.2796
1546	-46.031	-26.735	167.604	10617	5539	8980	1.99308	0.57275
1547	60.853	-28.105	116.509	1972	21114	21195	6.02877	0.93562
1548	62.737	-41.568	124.918	6989	6322	17725	8.0909	1.74954
1549	34.986	-0.698	184.29	18533	9744	18430	2.81899	1.36851
1550	77.264	-11.236	136.037	22721	10022	22631	4.14099	1.8306
1551	-17.923	-43.35	159.632	18591	993	21151	2.14629	0.68407
1552	-17.86	-28.274	190.207	20707	10662	20656	3.0647	1.72285
1553	30.349	-41.821	201.689	12876	11706	6559	6.13653	2.7807
1554	55.34	6.336	105.141	21433	21319	21431	3.68445	0.87791
1555	7.593	-61.302	180.076	20623	20578	18506	2.72968	1.22717
1556	-50.45	-24.005	159.584	9612	12137	13472	1.65124	0.3375
1557	46.133	-49.174	134.411	1085	4135	5347	8.20652	2.43299
1558	51.354	-53.022	197.72	8571	8554	1795	5.54528	2.77249
1559	-1.489	-46.538	147.781	6452	13014	12217	3.49495	1.13404
1560	87.841	-38.645	136.636	1322	16001	16000	8.81177	1.87902
1561	69.349	13.856	170.118	16037	15597	15987	7.67026	0.56014
1562	51.393	9.645	104.815	10737	11070	11137	3.68644	0.76433
1563	-37.982	-37.954	171.869	13602	13694	4754	1.61431	0.39276
1564	58.585	0.428	184.939	19442	8040	19142	6.30462	0.52254
1565	15.9	-49.459	135.311	3069	11285	13317	4.72944	2.16178
1566	-41.309	-34.777	168.32	9239	12408	6674	1.63704	0.32348
1567	45.042	-25.848	98.99	6904	23626	8200	5.13225	1.33198
1568	-9.585	-28.749	190.834	13028	8271	13325	3.5885	2.37735
1569	61.323	13.233	174.527	17365	13515	17333	7.17975	0.89056
1570	68.046	-41.856	119.864	302	12372	5801	7.24038	1.46041
1571	27.297	-54.333	155.284	5120	11283	9034	5.27549	3.01534
1572	26.879	25.239	155.115	2119	5958	7320	6.51544	2.42717
1573	59.476	-51.075	125.997	1101	4782	4612	7.83497	1.66787
1574	44.895	22.277	170.047	20262	13582	13319	4.83457	0.86958
1575	54.009	-27.825	102.679	9653	4424	10909	5.61372	0.8888
1576	-29.694	-35.976	159.336	7668	15777	532	2.05746	0.49786
1577	57.246	-64.723	163.626	15191	16759	16710	3.882	1.668
1578	42.155	-3.943	99.796	15822	15682	7262	4.40387	0.90413
1579	78.216	-63.119	159.842	11788	6295	11373	6.76097	1.14327
1580	-11.561	-29.852	190.798	16191	16141	16080	3.15707	1.90778
1581	0.051	-46.201	137.404	20110	21070	21066	3.53798	0.74012
1582	63.419	-61.338	174.593	8065	2427	10077	2.54717	0.49172
1583	-36.918	-33.987	179.173	5974	3740	15126	1.40721	0.65229
1584	39.82	-6.985	195.878	9469	11334	11361	3.04767	1.05066
1585	60.145	26.529	129.707	16832	15982	6678	2.48699	0.44073
1586	38.914	15.637	131.528	776	19488	1451	2.66208	0.45127
1587	13.945	-56.242	151.517	23378	23322	23224	5.9561	1.76565
1588	50.293	12.581	114.607	12766	17567	17553	3.01644	0.83732
1589	76.95	3.639	160.848	15979	14521	7986	6.516	0.483
1590	-45.69	-24.182	179.759	4143	9260	12700	1.28344	0.62704
1591	64.546	22.137	140.122	13261	17801	7893	2.27138	0.45518
1592	53.227	-52.486	123.785	18885	8388	18884	7.26028	1.50587
1593	-5.781	-22.016	191.652	9629	5829	9622	4.95387	3.55656
1594	52.008	-60.04	187.01	18415	16460	10106	3.05065	0.62092
1595	22.977	-54.682	198.238	3347	15173	984	3.83989	2.22408
1596	54.422	1.405	100.497	7993	7705	4807	4.13288	0.82648
1597	-11.878	-44.946	194.799	8544	2052	9641	2.39924	0.50237
1598	40.576	16.381	132.347	6595	139	7318	2.84685	0.4105
1599	41.369	-58.306	143.154	12334	16334	11709	6.8248	2.88539
1600	-34.798	-21.7	182.724	10177	10081	10173	2.84551	0.86404
1601	0.29	-44.585	139.891	2027	2594	17644	3.41231	1.01248
1602	69.538	12.821	136.581	61	23414	14514	2.229	0.381
1603	-45.197	-18.352	181.033	4941	1304	3292	1.29012	0.64046
1604	72.539	8.446	123.754	18094	4113	18086	3.31431	1.18703
1605	-5.277	-35.595	191.013	13424	8141	4504	2.43053	0.71336
1606	-14.595	-3.291	184.249	14592	198	23091	3.03181	1.73995
1607	-45.07	-26.823	179.097	1960	12848	12802	1.29502	0.6071
1608	58.344	9.546	111.871	22719	22614	6311	3.01211	0.63362
1609	73.577	-1.003	114.404	4489	10831	18238	3.95763	0.88978
1610	27.871	-39.965	202.672	8204	12835	12843	6.39289	2.21957
1611	37.18	31.156	167.059	21032	20994	21015	3.84784	1.21785
1612	44.869	5.765	114.844	8990	9320	12205	3.6948	0.66843
1613	-24.153	-43.194	165.189	1798	15164	4276	2.20886	0.78366
1614	23.875	-33.199	191.65	9627	19458	19615	6.37456	2.3335
1615	68.705	-6.826	108.786	19246	13049	18860	4.46733	0.50638
1616	77.221	6.794	153.989	6866	21200	3528	4.644	1.4775
1617	-6.539	-54.963	174.134	15301	14380	2089	2.4614	0.67013
1618	-45.934	-11.041	178.586	15994	12878	12846	1.33176	0.63689
1619	-43.952	-19.698	182.343	20954	20919	19602	1.29696	0.65131
1620	-24.542	-43.803	167.24	592	6354	15336	2.21513	0.79296
1621	49.784	20.686	129.3	11280	1096	5787	2.58691	0.37787
1622	43.639	-36.743	189.959	1452	8568	8588	6.00516	1.54804
1623	73.924	6.018	137.233	4762	4205	2339	2.60614	1.96901
1624	-41.791	-19.207	184.241	21275	194	2826	1.3192	0.65951
1625	73.259	-29.658	174.469	5111	11798	11766	7.94628	2.24099
1626	6.877	-46.936	142.399	21288	4216	21249	4.90543	2.16106
1627	71.745	-16.52	165.809	16821	4730	16599	7.8593	0.75294
1628	47.672	-31.97	108.173	9318	13504	12373	5.20043	1.16159
1629	62.465	3.806	109.469	6672	12731	17779	3.74556	0.96038
1630	84.104	-0.53	119.372	3010	15868	5384	3.96458	0.86491
1631	8.971	-19.905	203.205	9212	3774	1275	5.22546	2.88552
1632	-43.729	-9.994	180.023	10183	19784	19716	1.30379	0.63367
1633	47.945	-19.307	105.823	9507	13313	11706	5.17261	0.9045
1634	95.196	-34.401	148.34	23691	23689	23688	7.60929	0.74966
1635	40.719	-27.186	198.739	6655	8389	8398	6.93951	1.81442
1636	69.213	18.74	135.829	2051	3603	16493	2.07112	0.45661
1637	90.898	-25.613	152.637	9865	14598	11523	6.79052	1.00838
1638	56.211	29.604	136.4	19850	19724	19786	2.3036	0.20741
1639	11.872	-15.532	201.458	19659	20901	4118	4.28915	3.2716
1640	-3.699	-12.085	189.366	14204	1085	2717	5.08248	2.38788
1641	43.743	20.477	125.154	12033	11919	12023	2.58729	0.50164
1642	-29.495	-16.349	190.118	15905	2101	15778	1.6316	0.69533
1643	59.224	-17.391	102.252	17615	17588	6452	5.49641	0.80574
1644	22.647	-14.606	199.995	17134	11624	6702	4.54473	1.89378
1645	77.904	6.084	154.733	4389	12086	10840	5.20803	1.25084
1646	23.46	-61.054	148.62	9635	14125	15420	6.29778	3.4973
1647	51.469	2.802	99.575	13309	13248	253	4.08315	0.76102
1648	43.153	-55.383	130.139	2616	4055	8178	7.61745	1.88428
1649	82.274	0.818	146.066	10565	11094	10580	4.50373	1.61472
1650	80.755	-21.008	176.134	13684	14678	1208	6.1393	0.64757
1651	46.127	12.285	112.988	2985	4616	16669	3.37718	0.75375
1652	-41.584	-24.377	185.356	6093	7052	17244	1.34186	0.66921
1653	75.106	8.836	152.645	4120	8823	282	5.47646	0.96788
1654	89.062	-38.754	140.477	12344	12675	928	8.53385	1.71061
1655	58.09	-5.993	187.563	12965	9786	11639	7.39022	0.4149
1656	-43.518	-13.966	175.863	13247	21998	22167	1.82576	0.7043
1657	32.576	-60.199	176.578	17556	3220	4021	3.09685	1.54065
1658	36.276	30.838	148.496	16410	13726	5166	3.27469	0.51986
1659	86.73	-22.499	170.214	6075	17435	6784	7.33836	1.04493
1660	15.803	-41.799	203.225	19274	19366	19304	5.67387	2.12865
1661	45.089	11.929	113.23	8581	391	8545	3.4841	0.73573
1662	48.273	27.194	136.473	4437	14438	17870	2.57199	0.24421
1663	82.275	-21.263	158.084	4312	16982	17021	7.47239	0.84658
1664	54.491	6.981	173.361	3924	20519	20462	6.5635	0.97021
1665	17.374	-49.321	140.796	11649	17066	18576	5.61688	2.7798
1666	34.754	-47.595	197.562	11013	13630	7334	5.45547	4.04463
1667	-46.379	-26.524	165.857	2046	5544	8027	1.9467	0.51948
1668	77.788	-30.138	184.154	23722	4270	23721	5.6532	1.29017
1669	31.441	-65.698	165.716	1491	1918	15798	5.00553	5.42892
1670	-25.167	-11.006	188.856	19814	20887	18058	2.00352	0.82014
1671	-16.011	-8.559	196.522	6498	7684	9740	2.73604	0.77249
1672	65.255	-13.25	106.088	3215	5227	4035	5.20257	0.68189
1673	-43.66	-28.967	161.569	5889	5687	4913	1.96507	0.41963
1674	73.108	7.083	126.315	7433	1232	15770	3.4748	0.84681
1675	73.165	-2.312	112.682	6584	16131	16154	4.02143	0.75324
1676	39.932	-40.968	107.736	2512	11379	10636	5.79307	1.25183
1677	5.949	-61.112	173.277	13794	9289	13762	2.80678	1.3551
1678	2.266	-46.745	142.298	1433	19754	10341	4.15554	1.50307
1679	46.3	-2.775	95.791	15459	9906	16461	4.59328	0.81362
1680	55.302	-59.804	145.393	21015	20994	10711	8.43077	2.11325
1681	-40.641	-18.394	184.95	9078	4292	21523	1.32956	0.6679
1682	30.689	23.98	156.81	935	3068	14718	7.07679	2.63968
1683	-46.638	-26.726	158.903	12858	12712	9237	1.85462	0.32677
1684	35.565	3.835	183.136	20740	20762	20720	2.9775	0.5355
1685	36.409	22.791	154.531	14109	15236	15260	7.15445	2.16659
1686	45.437	-16.951	99.597	14975	8511	14918	5.07582	1.20257
1687	6.135	-24.961	204.446	5068	2156	4253	5.02456	1.9976
1688	21.474	-13.032	189.669	4307	448	18503	3.86613	3.051
1689	81.502	-10.912	173.356	11615	14355	15087	8.53951	0.99238
1690	-36.749	-11.936	180.946	19503	22186	12516	2.17007	0.75636
1691	53.292	13.637	180.632	17727	2745	17772	5.59894	0.8602
1692	31.093	-56.103	162.258	8916	6193	5503	4.6419	3.36929
1693	26.17	-63.28	157.229	16445	16502	10110	5.55374	5.36333
1694	60.945	-54.791	188.37	7892	2505	8454	4.28996	0.60903
1695	32.917	-4.721	184.33	11786	11766	4803	3.31024	2.10951
1696	-25.551	-52.699	180.906	20089	5092	4170	2.04523	0.36908
1697	78.407	-56.248	162.517	22327	16122	11478	8.06816	1.51509
1698	-47.527	-24.216	168.822	6579	9009	1878	1.90087	0.59764
1699	15.479	-16.494	201.26	13627	15994	12846	4.58584	2.81881
1700	20.45	-55.587	198.394	18761	18671	18580	3.76228	1.85469
1701	47.761	12.607	111.074	8448	1268	3305	3.42071	0.76911
1702	-39.988	-17.382	184.852	14868	2449	11592	1.326	0.6615
1703	49.887	-6.803	98.443	8823	19195	2491	4.82936	0.97307
1704	20.299	-5.139	187.288	8359	11653	11661	4.36982	2.386
1705	46.939	23.66	163.487	22379	14681	22129	4.29172	0.79634
1706	62.569	-48.133	140.598	11513	11517	1566	10.57148	1.63195
1707	-5.134	-26.169	191.745	9366	2220	9548	3.99244	2.35832
1708	51.998	-28.43	195.164	13501	8422	16734	6.6793	2.18006
1709	70.445	0.01	143.351	6154	4769	6992	3.34259	1.17527
1710	58.964	-75.46	186.613	433	19683	19815	3.03624	0.57259
1711	51.125	2.433	187.977	6959	10888	10934	4.89415	0.62968
1712	43.14	-3.616	100.575	23240	23127	23185	4.37755	0.92225
1713	44.178	-55.676	130.631	18048	12678	10155	7.58991	1.89515
1714	36.617	-65.019	195.835	20171	12394	13536	3.26761	1.26005
1715	-3.11	-41.04	189.41	18118	18128	18169	2.25524	0.50321
1716	37.598	-12.079	186.087	17030	16937	16998	6.31888	5.87789
1717	59.212	-2.991	122.148	12259	16094	16082	3.9563	0.71757
1718	12.495	-37.955	204.54	13829	3227	13599	5.12253	1.76333
1719	62.973	16.049	118.104	10521	11406	9374	2.80082	0.68609
1720	-38.929	-15.15	179.799	12940	13221	13140	2.2784	0.77084
1721	-4.397	-48.724	159.319	5988	15021	14979	2.5891	0.76321
1722	51.359	7.116	119.809	19974	19905	19718	3.68391	0.72696
1723	51.846	-61.75	177.287	1932	7049	4329	2.94059	1.05029
1724	50.346	-60.133	187.791	15445	6315	15431	2.76335	0.57336
1725	74.16	-33.208	118.975	8909	15741	15666	6.5489	0.88415
1726	45.415	20.249	175.893	15987	15597	15942	5.05517	0.86472
1727	-38.211	-13.719	180.183	64	243	20346	2.17007	0.75627
1728	84.517	-60.994	169.233	14441	16278	16868	9.89642	2.26652
1729	-40.745	-25.461	185.962	21913	21703	18902	1.36657	0.6772
1730	-36.361	-18.163	181.28	8458	1389	9401	2.65534	0.82903
1731	-10.449	-27.517	197.474	19531	2343	19317	2.59355	0.62263
1732	56.406	-48.142	119.386	10943	6012	493	6.99164	1.34137
1733	-12.692	-4.333	195.135	15873	1518	17673	3.24235	0.9729
1734	40.07	-2.106	184.035	5317	2824	11208	6.07665	3.14806
1735	81.559	-42.639	145.465	14180	14131	12069	9.80463	2.6895
1736	41.767	15.626	182.712	14211	12069	14186	4.31155	1.01151
1737	42.427	4.074	181.291	13705	8994	1752	5.18652	1.20907
1738	66.545	-25.95	121.106	5498	15757	15818	6.09496	1.02143
1739	52.475	-62.167	154.56	6335	2793	15574	6.40945	2.59081
1740	20.389	-15.425	200.5	2052	4394	9641	4.71657	2.17547
1741	34.122	-62.244	196.069	18976	18795	18974	3.07258	1.0093
1742	73.063	-18.087	110.512	4436	20618	13392	5.44819	0.79363
1743	-39.377	-36.427	161.876	13428	17334	17366	1.88638	0.30333
1744	84.996	-5.098	123.331	15802	15667	9865	3.97636	1.25974
1745	70.172	-52.086	134.612	15393	6484	15310	9.85289	2.3113
1746	-11.198	2.159	182.433	2903	17636	11842	3.40169	1.13992
1747	50.155	12.466	123.253	2421	7475	10324	3.11948	0.63248
1748	36.958	-45.218	198.753	3797	4278	4047	5.64118	3.56057
1749	-37.598	-0.114	180.774	13649	13320	9204	1.4206	0.6536
1750	80.656	-20.815	149.273	11909	18396	10802	6.48603	0.8074
1751	86.535	-46.044	142.269	4048	13215	13453	8.95627	1.57258
1752	0.732	9.185	180.54	8043	5899	15716	3.94803	1.43205
1753	61.769	-61.561	175.407	4719	10895	8726	2.69916	0.61368
1754	-41.173	-5.314	180.91	15771	9528	2530	1.30056	0.63605
1755	42.849	-21.877	97.954	10251	8361	5727	5.3252	1.48241
1756	78.476	-52.885	155.42	12560	16315	2193	9.78197	0.86539
1757	39.888	-0.162	94.249	20474	20409	20473	4.38834	0.68232
1758	-13.561	-34.252	196.984	16766	16088	11793	2.36613	0.49747
1759	-23.51	-47.442	152.326	13750	16297	6421	2.0003	0.39653
1760	46.938	26.416	154.872	20110	21059	9580	3.54592	0.61658
1761	66.061	3.794	118.674	18267	18106	18165	3.65586	1.30461
1762	42.112	-63.34	163.364	14571	664	14396	4.87826	4.52668
1763	50.068	24.625	133.387	2358	6637	13766	2.48578	0.28694
1764	34.939	15.122	127.171	13817	13172	13733	2.55753	0.74084
1765	-32.145	-11.497	182.011	12362	12517	12592	2.27794	0.82072
1766	77.619	-11.194	175.984	4165	14763	1124	8.08418	0.84884
1767	14.902	-49.709	200.595	5715	11336	11277	4.58907	1.85158
1768	69.658	-69.731	175.584	8432	8407	1831	2.95031	0.43827
1769	-31.924	-18.546	182.798	9994	9963	9144	2.81127	0.86537
1770	84.168	-9.294	123.141	18209	5912	734	4.43942	1.27249
1771	-29.744	-37.524	162.105	1592	7866	7885	2.13627	0.6224
1772	-44.57	-14.317	180.016	2651	8050	12197	1.30651	0.64053
1773	70.499	-12.008	107.955	1144	16759	15191	4.99983	0.63377
1774	70.236	-14.467	170.107	11205	9554	10956	8.30449	0.64184
1775	53.709	24.377	154.275	4897	21402	21380	3.6075	0.64248
1776	-18.972	-55.621	188.018	4255	5571	210	2.09279	0.37753
1777	78.594	-11.796	146.382	8524	8505	5152	5.60998	0.73161
1778	37.787	21.267	173.081	4527	5847	5597	4.21599	1.24877
1779	71.036	-48.121	145.408	14124	14111	3026	10.31737	1.80736
1780	17.551	-58.766	155.041	6318	2191	10012	5.41361	2.6726
1781	62.633	15.358	123.918	1231	23217	22651	2.742	0.285
1782	16.7	37.1	166.55	13140	12336	12940	4.47326	1.53157
1783	35.714	23.433	152.338	9989	1102	9895	6.7872	2.00766
1784	25.148	32.07	164.078	18232	10451	10461	4.65277	1.30385
1785	42.903	2.056	190.698	12137	13397	13472	2.84913	0.48701
1786	34.781	18.682	123.369	16250	12159	16121	2.54503	0.80264
1787	53.278	-5.236	107.6	10209	9518	10070	4.88655	0.94206
1788	85.415	-7.996	158.923	8306	1302	8275	7.26155	1.1162
1789	44.449	10.581	114.361	4080	8659	361	3.43084	0.71926
1790	22.636	-61.592	159.17	20382	20263	4304	5.09821	4.94392
1791	-30.637	-30.312	188.324	10230	5741	9483	1.61035	0.66378
1792	-2.341	-28.281	198.624	17015	851	16959	3.7697	1.24064
1793	0.134	-0.202	184.855	20771	586	20729	4.54224	1.33246
1794	40.664	28.416	138.847	20339	17752	2195	2.92746	0.37704
1795	-15.797	-51.29	190.313	16134	10213	11953	2.22255	0.46503
1796	21.406	10.558	180.39	17061	17019	630	5.00481	4.89695
1797	57.429	-14.31	100.808	2789	16909	3521	5.30408	0.82321
1798	6.24	-27.112	190.843	12531	12364	8211	4.28467	0.88843
1799	48.515	-44.494	118.209	23116	23092	22970	7.06833	1.55389
1800	-48.03	-24.868	164.977	4976	19883	19960	1.76014	0.49721
1801	-25.907	-38.901	145.489	8700	20958	6712	1.87774	0.25502
1802	54.792	-58.875	196.143	15310	7236	4296	5.03669	3.17786
1803	27.042	-67.688	191.06	5871	1998	14318	2.18336	1.66971
1804	47.758	12.203	130.858	20863	20829	20692	2.98602	0.5797
1805	13.825	-21.597	202.666	22760	22682	13268	5.25444	2.42422
1806	-41.389	-1.962	178.683	22107	13315	2485	1.31549	0.63565
1807	-26.423	-14.85	190.917	6548	1552	11026	1.73365	0.68736
1808	86.703	1.21	123.178	10642	8879	18620	3.5625	0.90801
1809	39.318	5.155	181.816	16499	16373	2857	3.6843	0.76088
1810	8.541	-50.291	148.333	17251	14442	13099	5.78098	2.48013
1811	21.902	-57.74	144.086	14940	1479	15167	6.29829	2.86444
1812	92.048	-29.562	139.177	5507	2198	11060	7.29298	1.20852
1813	-21.861	-43.655	147.178	4916	17113	16795	1.95228	0.34075
1814	76.693	-9.868	142.945	17222	17686	12757	5.05796	0.93294
1815	-0.898	-34.156	199.244	21562	21542	21541	3.24261	0.79254
1816	29.488	12.56	175.917	9268	10179	10988	6.13178	3.96761
1817	-35.169	-29.2	187.41	8807	8793	2140	1.4719	0.69582
1818	-45.796	-23.09	172.392	7223	16489	16539	2.03723	0.68567
1819	-36.478	-21.176	190.855	17628	4471	94	1.37838	0.72743
1820	48.963	-50.771	140.788	20001	19861	1317	7.73238	2.72682




Many thanks 
neil








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From tim.gallagher at gatech.edu  Fri Feb  5 05:25:13 2016
From: tim.gallagher at gatech.edu (Tim Gallagher)
Date: Fri, 05 Feb 2016 10:25:13 -0000
Subject: [Paraview] [Non-DoD Source] Building on Cray systems
In-Reply-To: <CAMaOp+H1HdgBJmcHr-GWn=O9JgSDd=ubYioEwFgokZdUvOzfpg@mail.gmail.com>
Message-ID: <349981568.26567490.1454667903745.JavaMail.root@mail.gatech.edu>

Good morning! 

Thanks Andy and Richard for the advice. 

After banging my head on my keyboard for most of the day yesterday, neither approach worked on Copper. 

For Andy's suggestion of building pv5.0 with the Cray cross compiling script, I got a bunch of errors towards the end. It looks like many things did build, but then those errors about an unknown system kicked in and it seemed to all fall apart. I attached the output log as cray_build_pv5.0.txt 

Richard, I tried your setup as well. I initially was trying to avoid the building CMake step but eventually something in the ParaviewSuperbuild failed because it said it needed CMake 2.8.11 and Copper only has 2.8.10. So, I took a step back and tried to build CMake. When I just do what is in your script -- configure and then make -- the build fails quickly because it says it cannot statically link shared libraries. So I tried to build CMake using the Catamount.cmake toolchain that we use for our application code as well. The initial configuration took over an hour, it sits at 95% for a long time going through the portion where it looks for various headers/features. But eventually it finishes and I tried to build but that failed. I get: 

tgallagh at copper01:~/cmake/build> make 
[ 3%] Built target cmsys 
[ 4%] Built target cmsys_c 
[ 6%] Built target cmzlib 
[ 6%] Building C object Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o 
/u/tgallagh/cmake/cmake/Utilities/cmcurl/lib/strerror.c:32:6: error: #error "strerror_r MUST be either POSIX, glibc or vxworks-style" 
# error "strerror_r MUST be either POSIX, glibc or vxworks-style" 
^ 
make[2]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/strerror.c.o] Error 1 
make[1]: *** [Utilities/cmcurl/lib/CMakeFiles/cmcurl.dir/all] Error 2 

So taking a big step backwards here to look at the big picture -- am I (and our lab) just using Cray systems in a fundamentally incorrect way? We've always struggled to get things to build when we never have had issues with SGI/Intel, BlueGene, or IBM machines (even when they were using PowerPC). We used to have all these same issues with our CFD code on Cray as well and the only solution we found was to build all of our codes' libraries statically and drop support for shared libraries. 

I appreciate the help with the scripts. If there's any follow-up advice on what I'm doing wrong in both/either approach, that would be great. 

Thanks, 

Tim 


----- Original Message -----

From: "Andy Bauer" <andy.bauer at kitware.com> 
To: "tim gallagher" <tim.gallagher at gatech.edu> 
Cc: "paraview" <paraview at paraview.org>, "Richard C Angelini (Rick) CIV USARMY RDECOM ARL (US)" <richard.c.angelini.civ at mail.mil> 
Sent: Thursday, February 4, 2016 9:37:11 AM 
Subject: Re: [Paraview] [Non-DoD Source] Building on Cray systems 










Hi Tim, 

I would recommend the ParaView superbuild script at Scripts/Sites/Cray-PrgEnv-cross-compile.sh for building PV 5.0. 

The options you want to give it are the following: 
Cray-PrgEnv-cross-compile.sh <comp> </path/to/cmake> </temp/download/directory> </install/directory> 

Here, comp needs to be the string used to load the program environment, e.g. "PrgEnv-[gnu/gcc/Gnu] on those machines. 

I used this to build a PV 5.0 pre-release version on Cori at NERSC and it worked just fine. It doesn't have an option to freeze python but after running that script you can go into the newly created cross/paraview/src/paraview-build subdirectory and switch it to that. 

Another thing is if you're using the Intel compilers you may need to do a "module load gcc" when building and running your code. Intel's C++11 compilers rely on the GCC header files and libraries for some stuff and without gcc loaded it will give errors like "missing GLIBC". 

Good luck and let us know how it goes! 

Best, 
Andy 









On Thu, Feb 4, 2016 at 9:24 AM, Tim Gallagher < tim.gallagher at gatech.edu > wrote: 




Andy, 

We don't really care about the compiler or MPI used for paraview. Our code only supports Intel and GNU, but for simplicity I usually build paraview with GNU so everybody can use it. We usually use the default MPI for a system also, which on copper is cray-mpich/7.1.0 currently. 

When we build our code, we have to specify the Catamount toolchain so everything is statically linked because we haven't really figured out how to update everything to use shared libraries on the compute nodes. When we first set up our build environment, shared libraries wasn't an option. If we go that route, will I need the FREEZE_PYTHON option since shared linking won't be available? 

I suppose the proper answer is that we should update our build environment for shared linking rather than static. It's been on my to-do list to figure out for awhile now, but I haven't been able to write the proper toolchain file for it. 

It appears that on copper at least (haven't checked the others), the system install has the libvtkPVPythonCatalyst* libraries (I misspoke in my previous email) but it does not have the development files from the PARAVIEW_INSTALL_DEVELOPMENT_FILES option. That and PARAVIEW_ENABLE_COPROCESSING are the only options in addition to the standard set of build options we need. 

Tim 



From: "Andy Bauer" < andy.bauer at kitware.com > 
To: "Richard C Angelini (Rick) CIV USARMY RDECOM ARL (US)" < richard.c.angelini.civ at mail.mil > 
Cc: "tim gallagher" < tim.gallagher at gatech.edu >, "paraview" < paraview at paraview.org > 
Sent: Thursday, February 4, 2016 9:15:03 AM 
Subject: Re: [Paraview] [Non-DoD Source] Building on Cray systems 






Hi Rick, 

Did you build ParaView with PARAVIEW_INSTALL_DEVELOPMENT_FILES enabled? Tim will need that for using Catalyst if he's going to be using your builds but not if he's going to do his own. 

Tim, some questions on what you need: 

    * Do you have a specific compiler and version you want/need to use? Same thing for MPI implementation. 
    * Do you have a specific version of ParaView that you want to use? 


I would recommend using the superbuild tools, to build statically with Python and Mesa. The other libraries can be built with the superbuild (definitely use system MPI though) for convenience even though for Catalyst you probably won't need many of them. The FREEZE_PYTHON option is to statically linking the other Python modules into the executable. This is definitely useful for when running with a high number of MPI ranks since when loading a module (e.g. paraview.simple) in parallel it can really kill the file system if thousands of processes are simultaneously trying to load a bunch of Python modules. Note though that this isn't needed for a Catalyst Python script since that is done specially where process 0 reads the file and broadcasts it to all of the other processes. 
Cheers, 
Andy 



On Thu, Feb 4, 2016 at 8:54 AM, Angelini, Richard C (Rick) CIV USARMY RDECOM ARL (US) < richard.c.angelini.civ at mail.mil > wrote: 

<blockquote>
Tim - I've already built ParaView on all of these systems - there are 
modules available to load various version of Paraview. If you need to do 
your own builds to support specific functionality - I can provide you the 
build scripts we use on those systems. 




-----Original Message----- 
From: ParaView [mailto: paraview-bounces at paraview.org ] On Behalf Of Tim 
Gallagher 
Sent: Thursday, February 04, 2016 8:25 AM 
To: paraview < paraview at paraview.org > 
Subject: [Non-DoD Source] [Paraview] Building on Cray systems 

All active links contained in this email were disabled. Please verify the 
identity of the sender, and confirm the authenticity of all links contained 
within the message prior to copying and pasting the address to a Web 
browser. 




---- 

Hi everybody, 

I'm about to endeavor on the always fun process of building Paraview on Cray 
systems, specifically Copper (ERDC), Garnet (ERDC) and Excalibur (ARL). 
Little is ever easy on these systems and I've never succeeded at building 
paraview on them in the past. However, we want to run with co-processing on 
the compute nodes and so it's time to try again. 

I saw there are some build scripts in the ParaviewSuperbuild for Cray 
systems. Does anybody know of any documentation or examples on how to use 
them? What dependencies do I need to build using the superbuild and what can 
I use that is already on the system? For example -- python, HDF5, zlib, etc 
are all available, but do I need to build my own versions? 

Is it possible to build just Paraview (not using the superbuild) using the 
system-installed modules? Does the FREEZE_PYTHON option work or help 
eliminate the issues of running on the compute nodes? 

If anybody has any advice on the best way to go, I would greatly appreciate 
it. We need to have python, co-processing, and off-screen rendering enabled; 
otherwise, it's just the standard build options. 

Thanks! 

Tim 
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From kmorel at sandia.gov  Mon Feb  8 17:41:20 2016
From: kmorel at sandia.gov (Moreland, Kenneth)
Date: Mon, 08 Feb 2016 22:41:20 -0000
Subject: [Paraview] mapping scalars onto surface geometry
Message-ID: <D2DE659A.2CA79%kmorel@sandia.gov>

Giles,

"Image Data" is simply what VTK calls a structured grid with axis aligned points with uniform spacing between them. It is a restrictive data format, but if your data fits then it is a compact representation because you don't have to explicitly specify cell connections or point locations. I've attached an excerpt from the ParaView Tutorial that lists the data types including both image data and unstructured grids.

Legacy VTK files (those with a .vtk extension) can represent either unstructured grid data or image data. I've also attached an example vtk file containing image data. Complete documentation of the vtk file format can be found in this document: http://www.vtk.org/VTK/img/file-formats.pdf.

-Ken

From: Richardson CFD <garcfd at gmail.com<mailto:garcfd at gmail.com>>
Date: Sunday, February 7, 2016 at 3:15 AM
To: Kenneth Moreland <kmorel at sandia.gov<mailto:kmorel at sandia.gov>>
Cc: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>
Subject: [EXTERNAL] Re: mapping scalars onto surface geometry

Kenneth, wonderful - that's done the trick (see attached).
A quick and simple solution!

Whats the difference between an image file (and the unstructured data file that I have created)?

Thanks very much, Giles.

On Sun, Feb 7, 2016 at 6:31 AM, Moreland, Kenneth <kmorel at sandia.gov<mailto:kmorel at sandia.gov>> wrote:
Giles,

I think I've figured out your problem. The scalars data you sent me is an unstructured grid with "voxel"-type cells. One of my least favorite features of VTK is that there is a distinction between a box in an unstructured grid (called a hexahedra) and a box in a data set with structured grid (called a voxel). These two cells are essentially the same shape, but the order of the points is different.

The reason why I dislike this feature is that it is technically allowable to put voxel cells in an unstructured grid. However, this fouls up lots of filters that don't check for this corner case. Apparently the probe filter, which is the underlying filter for resample with dataset, is one of the filters broken for voxels. (Unless there is something else about this dataset that I am missing.) I submitted a bug about this (http://www.paraview.org/Bug/view.php?id=15982).

The most expedient way around this problem is to run the tetrahedralize filter on the scalars. That will convert the voxels to tetrahedra correctly, and the probe filter has no problem on that data type. The interpolation will be slightly different but close. Overall a better solution is to save your data as image data rather than convert it to an unstructured grid. The file will be smaller and the interpolation should happen correctly.

-Ken

From: Richardson CFD <garcfd at gmail.com<mailto:garcfd at gmail.com>>
Date: Saturday, February 6, 2016 at 5:54 AM
To: "paraview at paraview.org<mailto:paraview at paraview.org>" <paraview at paraview.org<mailto:paraview at paraview.org>>, Kenneth Moreland <kmorel at sandia.gov<mailto:kmorel at sandia.gov>>
Subject: [EXTERNAL] mapping scalars onto surface geometry

Kenneth,

I have made two files here available for download (sphere.stl and scalars.vtk).

https://drive.google.com/file/d/0B4bNbYR3XwvQVlBZNlVBX0RXSkU/view?usp=sharing

https://drive.google.com/file/d/0B4bNbYR3XwvQTkJxRDhLb0MxZGc/view?usp=sharing

I hope you can give these a try using "Resample with Dataset" to see what the problem is.

Regards Giles.
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From ruggiero.guida at gmail.com  Tue Feb 23 10:24:49 2016
From: ruggiero.guida at gmail.com (Ruggiero Guida)
Date: Tue, 23 Feb 2016 15:24:49 -0000
Subject: [Paraview] CellDataToPointData much slower in 5.0?
In-Reply-To: <CACJ=gTgY1+ZcfHcheJmKMkayzKp4UwTnNapXaHvN1nwyTVjkKw@mail.gmail.com>
References: <CA+U776BXLbzgeybPwu+VhP5bvbZwskVTjYGfejBb3wFHg79_ZQ@mail.gmail.com>
 <CAB5Fpx7GhuV7+2+99jC7dK4Ayb9afw9RYsSfQhNpPWsdwaVtSg@mail.gmail.com>
 <CA+U776Cp7nLsRWjRGu39cpT9kCWg6iCAh4BO5mU6PHdtV5qGkQ@mail.gmail.com>
 <CACJ=gTgY1+ZcfHcheJmKMkayzKp4UwTnNapXaHvN1nwyTVjkKw@mail.gmail.com>
Message-ID: <CA+U776Az+fovS1TGb2pg7X2y932dMNj8gNUuv0RaZovrbZHDEA@mail.gmail.com>

Hi Joachim,

You can download the first 10 files of the series here
<https://dl.dropboxusercontent.com/u/1342856/Archive.zip>.  I am also
attaching the state file

The pipeline is quite simple:
- Open files
- Apply filter

Thanks
Ruggiero

On Tue, 23 Feb 2016 at 15:09 Joachim Pouderoux <
joachim.pouderoux at kitware.com> wrote:

> Ruggiero,
>
> Could you give us the whole pipeline involved here?
> As you are processing temporal data, CellDataToPointData might not be the
> problem here: the reader might be the cause.
>
> Joachim
>
> *Joachim Pouderoux*
>
> *PhD, Technical Expert*
> *Kitware SAS <http://www.kitware.fr>*
>
>
> 2016-02-23 15:16 GMT+01:00 Ruggiero Guida <ruggiero.guida at gmail.com>:
>
>> Hi Cory,
>>
>> I am using the binary version:
>>
>> ParaView-5.0.0-Qt4-OpenGL2-MPI-OSX10.7-64bit.dmg
>>
>> Thanks
>> Ruggiero
>>
>> On Tue, 23 Feb 2016 at 14:15 Cory Quammen <cory.quammen at kitware.com>
>> wrote:
>>
>>> Ruggiero,
>>>
>>> Are you using the ParaView 5.0 MacOS binary from the ParaView
>>> downloads page, or are you building it yourself? If the latter, make
>>> sure to build in Release mode.
>>>
>>> Thanks,
>>> Cory
>>>
>>> On Tue, Feb 23, 2016 at 9:14 AM, Ruggiero Guida
>>> <ruggiero.guida at gmail.com> wrote:
>>> > Hi,
>>> >
>>> > I am testing Paraview 5.0 on MacOS X Yosemite and I have noticed that
>>> the
>>> > CellDataToPointData filter has become very, very slow.
>>> >
>>> > I am visualizing a timeseries and each timestep may take up to 2
>>> seconds to
>>> > be visualized.
>>> >
>>> > In order to verify I have reinstalled 4.4 and everything is smooth as
>>> > always.
>>> >
>>> > Any suggestion on why this is happening? Is there any default
>>> parameter that
>>> > I should set?
>>> >
>>> > Thanks
>>> > Ruggiero
>>> >
>>> > _______________________________________________
>>> > Powered by www.kitware.com
>>> >
>>> > Visit other Kitware open-source projects at
>>> > http://www.kitware.com/opensource/opensource.html
>>> >
>>> > Please keep messages on-topic and check the ParaView Wiki at:
>>> > http://paraview.org/Wiki/ParaView
>>> >
>>> > Search the list archives at: http://markmail.org/search/?q=ParaView
>>> >
>>> > Follow this link to subscribe/unsubscribe:
>>> > http://public.kitware.com/mailman/listinfo/paraview
>>> >
>>>
>>>
>>>
>>> --
>>> Cory Quammen
>>> R&D Engineer
>>> Kitware, Inc.
>>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>
>>
>
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From pmopanhx at gmail.com  Thu Feb 25 22:52:23 2016
From: pmopanhx at gmail.com (hengxing pan)
Date: Fri, 26 Feb 2016 03:52:23 -0000
Subject: [Paraview] How to determine that some points are inside some
 closed surfaces or not ?
In-Reply-To: <CAB5Fpx5iyzBWEvLcaw+Z+EnbUPvT51msVWo6tOXiL_EMbLg9RQ@mail.gmail.com>
References: <CAFJvLTaVeU7D38uU4o6mUSEJe8Q5XFCD7VC5NsvOyDO2z4+uGw@mail.gmail.com>
 <CAB5Fpx5iyzBWEvLcaw+Z+EnbUPvT51msVWo6tOXiL_EMbLg9RQ@mail.gmail.com>
Message-ID: <CAFJvLTYJP+SdnGiXndv71rUbM3YPaEORsHYOWLgu2Rok5Bi9cw@mail.gmail.com>

Hi, Cory
I have tried to take out the points inside a tube to lines in the same
programmable filter as you, but it turns out that there are always some
points outside the tube which the filter can not get rid of. I have made a
small example for you. Do you have any idea about this situation ?
Hengxing

2016-02-23 22:57 GMT+08:00 Cory Quammen <cory.quammen at kitware.com>:

> Hi,
>
> Please load the attached state file that shows how to find the points
> inside an object. In this case, I use a Point Source to generate the
> points and a Sphere Source to generate the object. The Programmable
> Filter shows how to find the signed distance of points to the nearest
> surface, then threshold those points to select all whose signed
> distance is less than 0.
>
> HTH,
> Cory
>
> On Tue, Feb 23, 2016 at 6:15 AM, hengxing pan <pmopanhx at gmail.com> wrote:
> > Hi,all
> >
> > I wrote the lines.vtk in binary format and the points.vtk in ASCII format
> > according to www.vtk.org/VTK/img/file-formats.pdf.
> > The attached pictures show the process how I get the tubes(closed
> surfaces
> > which I thought the tubes are) ,then I want to find out the points which
> are
> > inside the tubes (blue area in the view3), but I don't know how to work
> it
> > out.
> > Now I'm desperate for achieving my aim, so please help me if you know
> how to
> > do it !
> > Thank you in advance !
> > pan hengxing
> >
> >
> >
> > _______________________________________________
> > Powered by www.kitware.com
> >
> > Visit other Kitware open-source projects at
> > http://www.kitware.com/opensource/opensource.html
> >
> > Please keep messages on-topic and check the ParaView Wiki at:
> > http://paraview.org/Wiki/ParaView
> >
> > Search the list archives at: http://markmail.org/search/?q=ParaView
> >
> > Follow this link to subscribe/unsubscribe:
> > http://public.kitware.com/mailman/listinfo/paraview
> >
>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
>
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