[Paraview] numpy build issues

Scott, W Alan wascott at sandia.gov
Fri Oct 16 14:44:40 EDT 2015


I am having issues getting ParaView, remote cluster, working with my own build of Python and numpy.  Obviously, I don't have root on these clusters, and I want to use my own Python.  (Clusters often have 10 year old python.)

>From the following, it appears I am missing a libgfortran.so.1.  Any idea why numpy wants Fortran, where it should be found and what I did wrong?   Any idea what I should do to fix it?

Thanks,

Alan

Python 2.7.5 (default, Jun 17 2013, 15:19:53)
[GCC 4.1.2 20080704 (Red Hat 4.1.2-50)] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> import numpy
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/Users/me/Python-2.7.5/lib/python2.7/site-packages/numpy/__init__.py", line 137, in <module>
    import add_newdocs
  File "/Users/me/Python-2.7.5/lib/python2.7/site-packages/numpy/add_newdocs.py", line 9, in <module>
    from numpy.lib import add_newdoc
  File "/Users/me/Python-2.7.5/lib/python2.7/site-packages/numpy/lib/__init__.py", line 13, in <module>
    from polynomial import *
  File "/Users/me/Python-2.7.5/lib/python2.7/site-packages/numpy/lib/polynomial.py", line 17, in <module>
    from numpy.linalg import eigvals, lstsq, inv
  File "/Users/me/Python-2.7.5/lib/python2.7/site-packages/numpy/linalg/__init__.py", line 48, in <module>
    from linalg import *
  File "/Users/me/Python-2.7.5/lib/python2.7/site-packages/numpy/linalg/linalg.py", line 23, in <module>
    from numpy.linalg import lapack_lite
ImportError: libgfortran.so.1: cannot open shared object file: No such file or directory

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