[Paraview] Paravew on XC30

[Angelini, Richard C (Rick) CIV USARMY ARL (US)]

Yeah - I have two builds - one for the login nodes and one for the compute
nodes … yeah, I included the login node build - but the structure is
essentially the same.
________________________________
Rick Angelini
USArmy Research Laboratory
CISD/HPC Architectures Team
Phone:  410-278-6266




On 10/27/14, 12:11 PM, "Burlen Loring" <burlen.loring at gmail.com> wrote:

>Hi Rick,
>
>It doesn't look like you're building for the compute nodes, either that
>or you've got GPU's. for example Qt is on and OSMesa is off. I'm
>unfamiliar with the superbuild process but normally that would produce a
>binary that couldn't be run on the compute node without gpu's.
>
>I'm expecting my installs to work with the Kitware provided client
>binaries. For that in the past at least we need to match their build
>options to some some extent. For example the VisIt bridge would be on. I
>know there have been some updates to how the server capabilities are
>exposed so I'm not sure how much of an issue that is in 4.2.
>
>Burlen
>
>On 10/27/2014 08:22 AM, Angelini, Richard C (Rick) CIV USARMY ARL (US)
>wrote:
>> Chris - I’ve been able to build on 3 different XC30 systems … here’s my
>> script.  I’m using
>> PrgEnv-gnu/5.2.14
>> cray-mpich/6.3.1
>> gcc/4.8.2
>>
>>
>>
>> #!/bin/csh
>>
>> module unload PrgEnv-cray
>> module load PrgEnv-gnu
>> module load cray-mpich
>> module load pbs
>> module list
>>
>>
>> setenv gcc "gcc"
>> setenv gplusplus "g++"
>> setenv gfortran "gfortran"
>>
>> setenv CC $gcc
>> setenv CXX $gplusplus
>> setenv FC $gfortran
>> setenv F70 $gfortran
>> setenv F77 $gfortran
>> setenv F90 $gfortran
>> setenv F95 $gfortran
>>
>> set version=4.2.0
>>
>> if (! -d Build_${version}_mesa) mkdir Build_${version}_mesa
>>
>> cd Build_${version}_mesa
>>
>> if (! -d install) mkdir install
>>
>> set INSTALLPATH=`pwd`/install
>>
>> #Build the latest version of CMAKE
>> if (! -e install/bin/cmake) then
>>          echo "Need to build cmake"
>>          cp ../Downloads/cmake-2.8.11.tar.gz .
>>          tar xzvf cmake-2.8.11.tar.gz
>>          cd cmake-2.8.11
>>          ./bootstrap --prefix=$INSTALLPATH
>>          make -j 8 install
>>          cd ..
>> endif
>>
>> setenv PATH ${INSTALLPATH}/bin:$PATH
>>
>> cmake \
>> -DCMAKE_INSTALL_PREFIX:PATH=${HOME}/pv-test/${version}_mesa \
>> -DCMAKE_BUILD_TYPE=Release \
>> -DParaView_FROM_GIT=OFF \
>> -Ddownload_location=`pwd`/../Downloads \
>> -DParaView_URL=`pwd`/../Downloads/ParaView-v4.2.0-source.tar.gz \
>> -DENABLE_boost=ON \
>> -DENABLE_cgns=OFF \
>> -DENABLE_ffmpeg=ON \
>> -DENABLE_fontconfig=ON \
>> -DENABLE_freetype=ON \
>> -DENABLE_hdf5=ON \
>> -DENABLE_libxml2=ON \
>> -DENABLE_matplotlib=OFF \
>> -DENABLE_osmesa=OFF \
>> -DENABLE_mesa=ON \
>> -DENABLE_qt=ON \
>> -DENABLE_mpi=ON \
>> -DENABLE_numpy=ON \
>> -DENABLE_paraview=ON \
>> -DENABLE_png=ON \
>> -DENABLE_python=ON \
>> -DENABLE_qhull=ON \
>> -DENABLE_silo=ON \
>> -DENABLE_szip=ON \
>> -DENABLE_visitbridge=OFF \
>> 
>>-DMPI_CXX_LIBRARIES:STRING="/opt/cray/mpt/6.3.1/gni/mpich2-gnu/48/lib/lib
>>mp
>> ichcxx.so" \
>> 
>>-DMPI_C_LIBRARIES:STRING="/opt/cray/mpt/6.3.1/gni/mpich2-gnu/48/lib/libmp
>>ic
>> h.so" \
>> 
>>-DMPI_LIBRARY:FILEPATH="/opt/cray/mpt/6.3.1/gni/mpich2-gnu/48/lib/libmpic
>>hc
>> xx.so" \
>> 
>>-DMPI_CXX_INCLUDE_PATH:STRING="/opt/cray/mpt/6.3.1/gni/mpich2-gnu/48/incl
>>ud
>> e/" \
>> 
>>-DMPI_C_INCLUDE_PATH:STRING="/opt/cray/mpt/6.3.1/gni/mpich2-gnu/48/includ
>>e/
>> " \
>> -DUSE_SYSTEM_mpi=ON \
>> -DUSE_SYSTEM_python=ON \
>> -DUSE_SYSTEM_zlib=ON \
>> ../Source
>>
>> make -j 4 install
>>
>> ________________________________
>> Rick Angelini
>> USArmy Research Laboratory
>> CISD/HPC Architectures Team
>> Phone:  410-278-6266
>>
>>
>>
>>
>> On 10/27/14, 11:00 AM, "Burlen Loring" <bloring at lbl.gov> wrote:
>>
>>>
>>>
>>> Hi Christopher,
>>>
>>> I can't help you with the superbuild, but I can show you how to build
>>>PV
>>> on the XC30. here's
>>>
>>> the script
>>> 
>>><https://github.com/burlen/pvserver-configs/blob/master/servers/edison/b
>>>ui
>>> lds/config-pv-mesa.sh> I used to build ParaView 4.2 with
>>> PrgEnv-gnu/5.2.25 on our XC30
>>>
>>> You'll see a bunch of paths that need to be set specific to the version
>>> of PrgEnv-gnu that you are running. The easiest way to figure out these
>>> is to look at the CRAY_LD_LIBRARY_PATH environment variable. If for
>>>some
>>> reason that isn't set then you can alway
>>> look at the output of "CC --verbose". You also need to point to an
>>> OSMesa install
>>> <http://www.paraview.org/Wiki/ParaView/ParaView_And_Mesa_3D>.
>>>
>>> Burlen
>>>
>>> On 10/26/2014 10:22 PM, R C Bording wrote:
>>>
>>>
>>> Hi,
>>> Trying to build Paraview on our XC30,
>>> here is the end of the build log where it goes pear-shape,
>>>
>>> Making install in test
>>> /usr/bin/install -c -m 644 fonts.dtd
>>> 
>>>'/group/director100/cbording/vis/cle52/build/osmesa-ParaViewSuperbuild-4
>>>.2
>>> .0/ParaViewSuperbuild-4.2.0-build/install/etc/fonts'
>>> /usr/bin/install -c -m 644 ./fonts.conf
>>> 
>>>/group/director100/cbording/vis/cle52/build/osmesa-ParaViewSuperbuild-4.
>>>2.
>>> 0/ParaViewSuperbuild-4.2.0-build/install/etc/fonts/fonts.conf
>>> 
>>>/group/director100/cbording/vis/cle52/build/osmesa-ParaViewSuperbuild-4.
>>>2.
>>> 0/ParaViewSuperbuild-4.2.0-build/install/bin/fc-cache -s -f -v
>>> /usr/share/fonts: caching, new cache contents: 0 fonts, 10 dirs
>>> /usr/share/fonts/100dpi: /bin/sh: line 9: 16194 Illegal instruction
>>> 
>>>/group/director100/cbording/vis/cle52/build/osmesa-ParaViewSuperbuild-4.
>>>2.
>>> 0/ParaViewSuperbuild-4.2.0-build/install/bin/fc-cache -s -f -v
>>> make[5]: *** [install-data-local] Error 132
>>> make[4]: *** [install-am] Error 2
>>> make[3]: *** [install-recursive] Error 1
>>> make[2]: *** [fontconfig/src/fontconfig-stamp/fontconfig-install]
>>>Error 2
>>> make[1]: *** [CMakeFiles/fontconfig.dir/all] Error 2
>>> make: *** [all] Error 2
>>>
>>> Here is the cmake build flags for the paraviewsuperbuild script.
>>>
>>> IBS_TOOL_CONFIGURE='-DCMAKE_BUILD_TYPE=Release \
>>> -DParaView_FROM_GIT=OFF \
>>> -DParaView_URL=$MYGROUP/vis/cle52/src/ParaView-v4.2.0-source.tar.gz \
>>> -DENABLE_boost=ON \
>>> -DENABLE_cgns=OFF \
>>> -DENABLE_ffmpeg=ON \
>>> -DENABLE_fontconfig=ON \
>>> -DENABLE_freetype=ON \
>>> -DENABLE_hdf5=ON \
>>> -DENABLE_libxml2=ON \
>>> -DENABLE_matplotlib=OFF \
>>> -DENABLE_mesa=OFF \
>>> -DENABLE_mpi=ON \
>>> -DENABLE_numpy=ON \
>>> -DENABLE_osmesa=ON \
>>> -DENABLE_paraview=ON \
>>> -DENABLE_png=ON \
>>> -DENABLE_python=ON \
>>> -DENABLE_qhull=ON \
>>> -DENABLE_qt=OFF \
>>> -DENABLE_silo=ON \
>>> -DENABLE_szip=ON \
>>> -DENABLE_visitbridge=ON \
>>> 
>>>-DMPI_CXX_LIBRARIES:STRING="/opt/cray/mpt/7.0.0/gni/mpich2-gnu/49/lib/li
>>>bm
>>> pichcxx.so" \
>>> 
>>>-DMPI_C_LIBRARIES:STRING="/opt/cray/mpt/7.0.0/gni/mpich2-gnu/49/mpt/lib/
>>>li
>>> bmpich.so" \
>>> 
>>>-DMPI_LIBRARY:FILEPATH="/opt/cray/mpt/7.0.0/gni/mpich2-gnu/49/lib/libmpi
>>>ch
>>> cxx.so" \
>>> 
>>>-DMPI_CXX_INCLUDE_PATH:STRING="/opt/cray/mpt/7.0.0/gni/mpich2-gnu/49/inc
>>>lu
>>> de" \
>>> 
>>>-DMPI_C_INCLUDE_PATH:STRING="/opt/cray/mpt/7.0.0/gni/mpich2-gnu/49/inclu
>>>de
>>> " \
>>> -DUSE_SYSTEM_mpi=ON \
>>> -DUSE_SYSTEM_python=OFF \
>>> -DUSE_SYSTEM_zlib=ON '
>>>
>>> Is there other CRAY specific libraries that I should check for before I
>>> try again to install paraview?
>>> Our Cray does NOT have any GPUS!
>>>
>>> R. Christopher Bording
>>> Supercomputing Team-iVEC at UWA
>>> E: cbording at ivec.org
>>> T: +61 8 6488 6905
>>>
>>>
>>> 26 Dick Perry Avenue,
>>> Technology Park
>>> Kensington, Western Australia.
>>> 6151
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
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>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>>http://www.kitware.com/opensource/opensource.html
>>
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>>http://paraview.org/Wiki/ParaView
>>
>> Follow this link to subscribe/unsubscribe:
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>