[Paraview] ParaView superbuild matplotlib not finding numpy (UNCLASSIFIED)

Tue Jun 3 09:15:34 EDT 2014

Classification: UNCLASSIFIED
Caveats: NONE

Hi Cory,

When I do a make numpy, this is what I got the following.
In the pv-matplotlib-build.cmake file attached, -DNUMPY_INSTALL_DIR is defined 
as

-DNUMPY_INSTALL_DIR:PATH=/u/ssu/build/paraview/Build_4.1.0_osmesa/ParaViewSuperbuild_4.1.0-build/install;

Thanks for your help
-simon

================ make numpy =========================
-- Enabling zlib since needed by: boost;ffmpeg;freetype;hdf5;png;silo
-- Enabling boost as requested.
-- Enabling ffmpeg as requested.
-- Enabling freetype as requested.
-- Enabling libxml2 as requested.
-- Enabling fontconfig as requested.
-- Enabling szip as requested.
-- Enabling hdf5 as requested.
-- Enabling python as requested.
-- Enabling numpy as requested.
-- Enabling png as requested.
-- Enabling matplotlib as requested.
-- Enabling mpi as requested.
-- Enabling osmesa as requested.
-- Enabling qhull as requested.
-- Enabling silo as requested.
-- Enabling visitbridge as requested.
-- Enabling paraview as requested.
-- PROJECTS_ENABLED 
zlib;boost;ffmpeg;freetype;libxml2;fontconfig;szip;hdf5;python;numpy;png;matplotlib;mpi;osmesa;qhull;silo;visitbridge;paraview
-- Configuring done
-- Generating done
-- Build files have been written to: 
/u/ssu/build/paraview/Build_4.1.0_osmesa/ParaViewSuperbuild_4.1.0-build
[ 50%] Built target python
[100%] Built target numpy

=================================================================================

-----Original Message-----
From: Cory Quammen [mailto:cory.quammen at kitware.com]
Sent: Tuesday, June 03, 2014 8:50 AM
To: Su, Simon M CTR USARMY ARL (US)
Cc: ParaView
Subject: Re: [Paraview] ParaView superbuild matplotlib not finding numpy 
(UNCLASSIFIED)

Hi Simon,

You normally shouldn't have to point to the numpy directory, especially when 
you are opting to build numpy, as your options show. I wonder if your numpy 
built successfully.

If you navigate to

/u/ssu/build/paraview/Build_4.1.0_osmesa/ParaViewSuperbuild_4.1.0-build

and run 'make numpy', does it succeed?

Also, what can you send me the file 
/u/ssu/build/paraview/Build_4.1.0_osmesa/ParaViewSuperbuild_4.1.0-build/pv-matplotlib-build.cmake? 
There should be an option -DNUMPY_INSTALL_DIR:PATH in the command variable.

Thanks,
Cory

On Mon, Jun 2, 2014 at 5:05 PM, Su, Simon M CTR USARMY ARL (US) 
<simon.m.su.ctr at mail.mil> wrote:

	Classification: UNCLASSIFIED
	Caveats: NONE

	Hello,

	How do you specify to the superbuild process when building 'matplotlib', 
where
	numpy was built?  I  configured cmake using the following and the error
	message at the end of the email

	thanks
	-simon

	cmake \
	-DCMAKE_INSTALL_PREFIX:PATH=${HOME}/pv-test/${version}_osmesa \
	-DCMAKE_BUILD_TYPE=Release \
	-DParaView_FROM_GIT=ON \
	-DENABLE_boost=ON \
	-DENABLE_cgns=OFF \
	-DENABLE_ffmpeg=ON \
	-DENABLE_fontconfig=ON \
	-DENABLE_freetype=ON \
	-DENABLE_hdf5=ON \
	-DENABLE_libxml2=ON \
	-DENABLE_matplotlib=ON \
	-DENABLE_mesa=OFF \
	-DENABLE_mpi=ON \
	-DENABLE_numpy=ON \
	-DENABLE_osmesa=ON \
	-DENABLE_paraview=ON \
	-DENABLE_png=ON \
	-DENABLE_python=ON \
	-DENABLE_qhull=ON \
	-DENABLE_qt=OFF \
	-DENABLE_silo=ON \
	-DENABLE_szip=ON \
	-DENABLE_visitbridge=ON \
	-DUSE_SYSTEM_mpi=ON \
	-DUSE_SYSTEM_python=ON \
	-DUSE_SYSTEM_zlib=ON \
	../ParaViewSuperbuild_${version}

	===================== error message
	================================================
	-- Enabling zlib since needed by: boost;ffmpeg;freetype;hdf5;png;silo
	-- Enabling boost as requested.
	-- Enabling ffmpeg as requested.
	-- Enabling freetype as requested.
	-- Enabling libxml2 as requested.
	-- Enabling fontconfig as requested.
	-- Enabling szip as requested.
	-- Enabling hdf5 as requested.
	-- Enabling python as requested.
	-- Enabling numpy as requested.
	-- Enabling png as requested.
	-- Enabling matplotlib as requested.
	-- Enabling mpi as requested.
	-- Enabling osmesa as requested.
	-- Enabling qhull as requested.
	-- Enabling silo as requested.
	-- Enabling visitbridge as requested.
	-- Enabling paraview as requested.
	-- PROJECTS_ENABLED
	zlib;boost;ffmpeg;freetype;libxml2;fontconfig;szip;hdf5;python;numpy;png;matplotlib;mpi;osmesa;qhull;silo;visitbridge;paraview
	-- Configuring done
	-- Generating done
	-- Build files have been written to:
	/u/ssu/build/paraview/Build_4.1.0_osmesa/ParaViewSuperbuild_4.1.0-build
	/u/ssu/build/paraview/Build_4.1.0_osmesa/ParaViewSuperbuild_4.1.0-build/install/lib64/python2.6/site-packages
	[ 20%] [ 22%] [ 29%] [ 38%] [ 38%] [ 37%] [ 40%] [ 40%] Built target zlib
	Built target szip
	Built target python
	Built target libxml2
	Built target visitbridge
	Built target osmesa
	Built target mpi
	Performing update step for 'qhull'
	[ 49%] [ 55%] Built target freetype
	[ 70%] [ 70%] [ 73%] [ 73%] Built target hdf5
	Built target numpy
	Built target png
	Built target boost
	Built target ffmpeg
	[ 78%] Built target fontconfig
	[ 81%] [ 84%] Built target silo
	Performing build step for 'matplotlib'
	LD_LIBRARY_PATH =
	/u/ssu/build/paraview/Build_4.1.0_osmesa/ParaViewSuperbuild_4.1.0-build/install/lib:/opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/lib64:/opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/lib64:/opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/lib64:/opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/lib64:/opt/gcc/mpc/0.8.1/lib:/opt/gcc/mpfr/2.4.2/lib:/opt/gcc/gmp/4.3.2/lib:/opt/gcc/4.8.2/snos/lib64:/opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/lib64:/opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/lib64:/opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/lib64:/opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/lib64:/opt/gcc/mpc/0.8.1/lib:/opt/gcc/mpfr/2.4.2/lib:/opt/gcc/gmp/4.3.2/lib:/opt/gcc/4.8.2/snos/lib64
	Already on 'master'
	Your branch is up-to-date with 'origin/master'.
	CMake Error at
	/u/ssu/build/paraview/Build_4.1.0_osmesa/ParaViewSuperbuild_4.1.0/Projects/matplotlib.build.cmake:12
	(message):
	  Failed to locate numpy-egg

	CMake Error at
	/u/ssu/build/paraview/Build_4.1.0_osmesa/ParaViewSuperbuild_4.1.0-build/pv-matplotlib-build.cmake:26
	(message):
	  Failed!!!

	make[2]: *** [matplotlib/src/matplotlib-stamp/matplotlib-build] Error 1
	make[1]: *** [CMakeFiles/matplotlib.dir/all] Error 2
	make[1]: *** Waiting for unfinished jobs....
	[ 85%] Performing configure step for 'qhull'

	Classification: UNCLASSIFIED
	Caveats: NONE

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Classification: UNCLASSIFIED
Caveats: NONE

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