No subject
Wed May 9 12:08:04 EDT 2012
ent than the header files and libraries. By this I mean that it will pick u=
p the python header files and libraries from one version of python and the =
python interpretor will be from
a different version. I don't think that's what's going on but you may want=
to check on that in CMake.<br>
<br>
Andy<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Tue, Sep 11, 2012 at 11:21 AM, Vanmoer, Mark W &l=
t;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illin=
ois.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Hi Andy,</span><u></u><=
u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Sorry, I lost track of =
where I was in debugging. What I had was an openmpi/pgi debug build that pa=
ssed the ctest -R CoPro tests. But the app I'm working on
still crashes when trying to create a python interpreter.</span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">I started over from scr=
atch working with the Wiki example, using gcc 4.4.6 and mpich2 1.4.1p1.</sp=
an><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">I have the C++ =
wiki example working with both the ParaView-3.14.1-Source tarball and with =
git commit 2537cabbf0cc9b39f17f347105ee18c559d0041a.</span><u></u><u></u></=
p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">I then made a Fortran v=
ersion of the wiki example. It works with the ParaView-3.14.1-Source tarbal=
l build, but crashes when built against the git branch build.
Seems to be at the same spot as the pgi build, when it tries to return the=
python interpreter instance. I stepped through with gdb and don=92t see an=
ything obvious. It seems to crash when it tries to create an interpreter to=
add the python script to the module
search path.</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Mark</span><u></u><u></=
u></p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt; font-family:&quo=
t;Tahoma","sans-serif"">From:</span></b><span style=3D"font-=
size:10.0pt; font-family:"Tahoma","sans-serif""> Andy B=
auer
</span><a href=3D"mailto:[mailto:andy.bauer at kitware.com]" target=3D"_blank"=
><span style=3D"font-size:10.0pt; font-family:"Tahoma","sans=
-serif"">[mailto:andy.bauer at kitware.com]</span></a><span style=3D"font=
-size:10.0pt; font-family:"Tahoma","sans-serif"">
<br>
<b>Sent:</b> Thursday, August 30, 2012 10:26 PM<br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> </span><a href=3D"mailto:paraview at paraview.org" target=3D"_blank=
"><span style=3D"font-size:10.0pt; font-family:"Tahoma","san=
s-serif"">paraview at paraview.org</span></a><span style=3D"font-size:10.=
0pt; font-family:"Tahoma","sans-serif""><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?</span><u></u><u></u></p>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt">Glad to hear that it'=
s working. As for the parallel test failure, I think you can ignore that fo=
r now. I need to fix it but I just haven't gotten around to it yet. I think=
it's either a parallel rendering/compositing
issue or a problem with the actors's visibility in the views getting screw=
ed up. Both of those things are not my area of expertise so I've been reluc=
tant to go and fix it. Now that you've publicly shamed me I'm going to have=
to bite the bullet and fix it :)
Hopefully by the end of next week it will be fixed. I created a mantis iss=
ue (<a href=3D"http://paraview.org/Bug/view.php?id=3D13417" target=3D"_blan=
k">http://paraview.org/Bug/view.php?id=3D13417</a>) if you want to follow i=
t.<br>
<br>
Andy<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Thu, Aug 30, 2012 at 6:19 PM, Vanmoer, Mark W <=
;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illino=
is.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Hi Andy,
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Not sure what changed, =
but I was able to build pgi/openmpi and got to the point you did below, whe=
re the parallel test fails with =93CPGrid0 image compare failed.=94
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Can I ignore this error=
? Anyway, the python interpreter seems to be created, so that issue is clos=
ed.</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Mark</span><u></u><u></=
u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt; font-family:&quo=
t;Tahoma","sans-serif"">From:</span></b><span style=3D"font-=
size:10.0pt; font-family:"Tahoma","sans-serif""> Andy B=
auer [mailto:</span><a href=3D"mailto:andy.bauer at kitware.com" target=3D"_bl=
ank"><span style=3D"font-size:10.0pt; font-family:"Tahoma","=
sans-serif"">andy.bauer at kitware.com</span></a><span style=3D"font-size=
:10.0pt; font-family:"Tahoma","sans-serif"">]
<br>
<b>Sent:</b> Wednesday, August 29, 2012 12:15 PM</span><u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> <a href=3D"mailto:paraview at paraview.org" target=3D"_blank">parav=
iew at paraview.org</a><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?<u></u><u></u></p>
</div>
</div>
<div>
<div>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt">Ok, glad to hear that=
coprocessing is working in some fashion. Now to figure out how to get it r=
unning properly with your desired configuration. Unfortunately at this poin=
t I don't know how to move forward except
for trying to piecemeal from having it working with GCC without everything=
you need to working with PGI, CUDA and everything else.<br>
<br>
Andy<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Tue, Aug 28, 2012 at 2:51 PM, Vanmoer, Mark W <=
;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illino=
is.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">[mvanmoer at forge ParaVie=
w]$ git log origin/master | head -1</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">commit 2537cabbf0cc9b39=
f17f347105ee18c559d0041a</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">I should mention I do h=
ave a gcc, mvapich2 compiled version of coprocessing compiled on Forge and =
it works great. However any program built with PGI/openmpi
code (required because of the CUDA Fortran) crashes with MPI errors. That=
=92s why I was trying to build ParaView with PGI/openmpi. I guess I could t=
ry gcc/openmpi and see if that linked to pgi/openmpi will run.
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Mark</span><u></u><u></=
u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt; font-family:&quo=
t;Tahoma","sans-serif"">From:</span></b><span style=3D"font-=
size:10.0pt; font-family:"Tahoma","sans-serif""> Andy B=
auer [mailto:</span><a href=3D"mailto:andy.bauer at kitware.com" target=3D"_bl=
ank"><span style=3D"font-size:10.0pt; font-family:"Tahoma","=
sans-serif"">andy.bauer at kitware.com</span></a><span style=3D"font-size=
:10.0pt; font-family:"Tahoma","sans-serif"">]
<br>
<b>Sent:</b> Tuesday, August 28, 2012 12:19 PM</span><u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> <a href=3D"mailto:paraview at paraview.org" target=3D"_blank">parav=
iew at paraview.org</a><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?<u></u><u></u></p>
</div>
</div>
<div>
<div>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt">Hmm, ParaView has bee=
n undergoing a lot of changes lately so it's been a bit unstable. I just ch=
ecked out a clean version and built it without any problems. The SHA from t=
hat was 2537cabbf0cc9b39f17f347105ee18c559d0041a.
What version are you on?<br>
<br>
Have you tried building with GCC instead of PGI? I'm thinking of ways to si=
mplify the build since I haven't tried building with PGI+CUDA+MPI&#=
43;Python myself.<br>
<br>
Andy<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Mon, Aug 27, 2012 at 3:31 PM, Vanmoer, Mark W <=
;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illino=
is.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Hi Andy, I just did a f=
resh git clone and ccmake gives me</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Make Error at VTK/CMake=
/vtkModuleTop.cmake:29 (message):</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> No such mo=
dule "vtkWrappingTools" needed by "vtkUtilitiesWrapClientSer=
ver"</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Call Stack (most recent=
call first):</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> VTK/CMake/=
vtkModuleTop.cmake:45 (vtk_module_check)</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> VTK/CMake/=
vtkModuleTop.cmake:52 (vtk_module_check)</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> VTK/CMakeL=
ists.txt:334 (include)</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Mark</span><u></u><u></=
u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt; font-family:&quo=
t;Tahoma","sans-serif"">From:</span></b><span style=3D"font-=
size:10.0pt; font-family:"Tahoma","sans-serif""> Andy B=
auer [mailto:</span><a href=3D"mailto:andy.bauer at kitware.com" target=3D"_bl=
ank"><span style=3D"font-size:10.0pt; font-family:"Tahoma","=
sans-serif"">andy.bauer at kitware.com</span></a><span style=3D"font-size=
:10.0pt; font-family:"Tahoma","sans-serif"">]
<br>
<b>Sent:</b> Monday, August 27, 2012 11:59 AM</span><u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> <a href=3D"mailto:paraview at paraview.org" target=3D"_blank">parav=
iew at paraview.org</a><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?<u></u><u></u></p>
</div>
</div>
<div>
<div>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt">Hi Mark,<br>
<br>
With the modularization of VTK and ParaView the coprocessing tests were tem=
porarily in a bad state. The serial ones are fixed now (the parallel runs b=
ut gives incorrect results for the screenshot). Is it possible for you to u=
pdate your version of ParaView and
retry this?<br>
<br>
Thanks,<br>
Andy<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Fri, Aug 24, 2012 at 4:03 PM, Vanmoer, Mark W <=
;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illino=
is.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Hi, I rebuilt with Para=
ViewData directory set and it=92s only finding 1 out 3 of the CoProcessing =
tests. Did I forget a step?</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">$ ctest --verbose --out=
put-on-failure --output-log ctest.out -R CoProcess</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">UpdateCTestConfiguratio=
n from :/usr/apps/vis/ParaView/repo/withTesting/DartConfiguration.tcl=
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Parse Config file:/usr/=
apps/vis/ParaView/repo/withTesting/DartConfiguration.tcl</span><u></u><u></=
u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">UpdateCTestConfiguratio=
n from :/usr/apps/vis/ParaView/repo/withTesting/DartConfiguration.tcl=
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Parse Config file:/usr/=
apps/vis/ParaView/repo/withTesting/DartConfiguration.tcl</span><u></u><u></=
u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Test project /usr/apps/=
vis/ParaView/repo/withTesting</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Constructing a list of =
tests</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Done constructing a lis=
t of tests</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Checking test dependenc=
y graph...</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Checking test dependenc=
y graph end</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">test 29</span><u></u><u=
></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> Star=
t 29: vtkCoProcessor-HeaderTest</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">29: Test command: /usr/=
bin/python "/usr/apps/vis/ParaView/repo/ParaView/VTK/Testing/Core/Head=
erTesting.py" "/usr/apps/vis/ParaView/repo/ParaView/CoProcessing/=
Core"
"VTKCOPROCESSOR_EXPORT"</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">29: Test timeout comput=
ed to be: 1500</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">29: Use export macro: V=
TKCOPROCESSOR_EXPORT</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">1/3 Test #29: vtk=
CoProcessor-HeaderTest ........ Passed 0.37 s=
ec</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">test 100</span><u></u><=
u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> Star=
t 100: CoProcessingTestPythonScript</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">100: Test command: /usr=
/apps/vis/CMake/2.8.9/bin/cmake "-Dcfg=3DRelease" "-P" =
"/usr/apps/vis/ParaView/repo/withTesting/CoProcessing/CoProcessingTest=
PythonScript.cmake"</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">100: Test timeout compu=
ted to be: 1500</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">100: CMake Error at /us=
r/apps/vis/ParaView/repo/withTesting/CoProcessing/CoProcessingTestPythonScr=
ipt.cmake:6 (message):</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">100:
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">100: '/usr/=
apps/vis/ParaView/repo/withTesting/ThirdParty/protobuf/vtkprotobuf/bin/Rele=
ase/CoProcessingPythonScriptExample.exe'</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">100: does n=
ot exist</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">100:
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">100:
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">2/3 Test #100: CoProces=
singTestPythonScript .....***Failed 0.79 sec</span><u></u=
><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">CMake Error at /usr/app=
s/vis/ParaView/repo/withTesting/CoProcessing/CoProcessingTestPythonScript.c=
make:6 (message):</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> '/usr/apps/=
vis/ParaView/repo/withTesting/ThirdParty/protobuf/vtkprotobuf/bin/Release/C=
oProcessingPythonScriptExample.exe'</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> does not exist</=
span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">test 101</span><u></u><=
u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> Star=
t 101: PCoProcessingTestPythonScript</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">101: Test command: /usr=
/apps/vis/CMake/2.8.9/bin/cmake "-Dcfg=3DRelease" "-P" =
"/usr/apps/vis/ParaView/repo/withTesting/CoProcessing/PCoProcessingTes=
tPythonScript.cmake"</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">101: Test timeout compu=
ted to be: 1500</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">101: CMake Error at /us=
r/apps/vis/ParaView/repo/withTesting/CoProcessing/PCoProcessingTestPythonSc=
ript.cmake:6 (message):</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">101:
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">101: '/usr/=
apps/vis/ParaView/repo/withTesting/ThirdParty/protobuf/vtkprotobuf/bin/Rele=
ase/CoProcessingPythonScriptExample.exe'</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">101: does n=
ot exist</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">101:
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">101:
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">3/3 Test #101: PCoProce=
ssingTestPythonScript ....***Failed 0.01 sec</span><u></u=
><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">CMake Error at /usr/app=
s/vis/ParaView/repo/withTesting/CoProcessing/PCoProcessingTestPythonScript.=
cmake:6 (message):</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> '/usr/apps/=
vis/ParaView/repo/withTesting/ThirdParty/protobuf/vtkprotobuf/bin/Release/C=
oProcessingPythonScriptExample.exe'</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> does not exist</=
span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">The following tests pas=
sed:</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">  =
; vtkCoPr=
ocessor-HeaderTest</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">33% tests passed, 2 tes=
ts failed out of 3</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Total Test time (real) =
=3D 8.14 sec</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">The following tests FAI=
LED:</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">  =
; 100 - C=
oProcessingTestPythonScript (Failed)</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">  =
; 101 - P=
CoProcessingTestPythonScript (Failed)</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Errors while running CT=
est</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Mark</span><u></u><u></=
u></p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt; font-family:&quo=
t;Tahoma","sans-serif"">From:</span></b><span style=3D"font-=
size:10.0pt; font-family:"Tahoma","sans-serif""> Andy B=
auer [mailto:</span><a href=3D"mailto:andy.bauer at kitware.com" target=3D"_bl=
ank"><span style=3D"font-size:10.0pt; font-family:"Tahoma","=
sans-serif"">andy.bauer at kitware.com</span></a><span style=3D"font-size=
:10.0pt; font-family:"Tahoma","sans-serif"">]
<br>
<b>Sent:</b> Thursday, August 23, 2012 3:06 PM</span><u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> <a href=3D"mailto:paraview at paraview.org" target=3D"_blank">parav=
iew at paraview.org</a><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?<u></u><u></u></p>
</div>
</div>
<div>
<div>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt"> <u></u><u></u><=
/p>
<div>
<p class=3D"MsoNormal">On Thu, Aug 23, 2012 at 4:00 PM, Vanmoer, Mark W <=
;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illino=
is.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Two questions =96 is th=
ere a way to tell ctest where the ParaViewData is without having to go back=
into cmake and rebuilding?</span><u></u><u></u></p>
</div>
</div>
<div>
<p class=3D"MsoNormal"><br>
Not possible for most, if not all, tests. The reason is that the test doesn=
't get added unless ParaViewData is available.<br>
<u></u><u></u></p>
</div>
<blockquote style=3D"border:none; border-left:solid #cccccc 1.0pt; padding:=
0in 0in 0in 6.0pt; margin-left:4.8pt; margin-top:5.0pt; margin-right:0in; m=
argin-bottom:5.0pt">
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">And 2, is there a way t=
o tell ctest to not use MPIEXEC_MAX_NUMPROCS when running tests?</span><u><=
/u><u></u></p>
</div>
</div>
</blockquote>
<div>
<p class=3D"MsoNormal"><br>
Many parallel tests, including the parallel coprocessing test, usually just=
have it hard coded to use 2 or 4 processes for testing.<br>
<u></u><u></u></p>
</div>
<blockquote style=3D"border:none; border-left:solid #cccccc 1.0pt; padding:=
0in 0in 0in 6.0pt; margin-left:4.8pt; margin-top:5.0pt; margin-right:0in; m=
argin-bottom:5.0pt">
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Mark</span><u></u><u></=
u></p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt; font-family:&quo=
t;Tahoma","sans-serif"">From:</span></b><span style=3D"font-=
size:10.0pt; font-family:"Tahoma","sans-serif""> Andy B=
auer [mailto:</span><a href=3D"mailto:andy.bauer at kitware.com" target=3D"_bl=
ank"><span style=3D"font-size:10.0pt; font-family:"Tahoma","=
sans-serif"">andy.bauer at kitware.com</span></a><span style=3D"font-size=
:10.0pt; font-family:"Tahoma","sans-serif"">]
<br>
<b>Sent:</b> Thursday, August 23, 2012 1:32 PM</span><u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> <a href=3D"mailto:paraview at paraview.org" target=3D"_blank">parav=
iew at paraview.org</a><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?<u></u><u></u></p>
</div>
</div>
<div>
<div>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt">It looks like you've =
built it properly. At least I don't see anything that looks wrong. I think =
the reason you didn't get any coprocessing tests is that they depend on Par=
aViewDAta. Maybe the next step is to
download ParaViewData (git://<a href=3D"http://paraview.org/ParaViewData.g=
it" target=3D"_blank">paraview.org/ParaViewData.git</a>) and then set the l=
ocation ParaViewData in cmake. After that, run the coprocessing tests (ctes=
t -R CoProcess) and show me the output
from that.<br>
<br>
Andy<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Wed, Aug 22, 2012 at 12:26 PM, Vanmoer, Mark W &l=
t;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illin=
ois.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Hi Andy,</span><u></u><=
u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">I set PARAVIEW_ENABLE_P=
YTHON to ON, is more needed? It did build pvpython, I don=92t know if that=
=92s separate thing entirely, though.</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">$ pvserver =96version</=
span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">paraview version 3.14.1=
-1549-g5f34f40</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">$ python =96version</sp=
an><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Python 2.6.6</span><u><=
/u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">$ cmake =96version</spa=
n><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">cmake version 2.8.9</sp=
an><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">CMakeCache.txt is attac=
hed.</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">I also just noticed tha=
t ctest =96R CoProcessing returns No tests were found!!!, yet it does have =
other tests.</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Let me know what else y=
ou need.</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d">Mark</span><u></u><u></=
u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt; font-family:"C=
alibri","sans-serif"; color:#1f497d"> </span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt; font-family:&quo=
t;Tahoma","sans-serif"">From:</span></b><span style=3D"font-=
size:10.0pt; font-family:"Tahoma","sans-serif""> Andy B=
auer [mailto:</span><a href=3D"mailto:andy.bauer at kitware.com" target=3D"_bl=
ank"><span style=3D"font-size:10.0pt; font-family:"Tahoma","=
sans-serif"">andy.bauer at kitware.com</span></a><span style=3D"font-size=
:10.0pt; font-family:"Tahoma","sans-serif"">]
<br>
<b>Sent:</b> Wednesday, August 22, 2012 10:49 AM<br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> </span><a href=3D"mailto:paraview at paraview.org" target=3D"_blank=
"><span style=3D"font-size:10.0pt; font-family:"Tahoma","san=
s-serif"">paraview at paraview.org</span></a><span style=3D"font-size:10.=
0pt; font-family:"Tahoma","sans-serif""><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?</span><u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt">Hi Mark,<br>
<br>
I think I can guess what the problem is but can't be certain without some m=
ore information. My guess is that you're using ParaView 3.14.1 for this and=
you're trying to use the fortran interface but haven't built ParaView with=
Python enabled. There were some
dependency issues there that have been ironed out since then though. If th=
at's not the case though I'll need more information on versions and maybe s=
ending your CMakeCache.txt in your ParaView build directory.<br>
<br>
Andy<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Wed, Aug 22, 2012 at 11:12 AM, Vanmoer, Mark W &l=
t;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illin=
ois.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal">Hello,<u></u><u></u></p>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal">I'm setting up someone's code to use coprocessing wi=
th OSMesa and openmpi/pgi/cuda fortran on NCSA's Forge using ParaView from =
the git repo. I'm getting segfaults and pgdbg gives me this error when copr=
ocessorinitialize is called:<u></u><u></u></p>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal">[0] Signalled SIGSEGV at 0x2B62188CFD9A, function vt=
kCPPythonHelper::GetPythonInterpretor(), file /usr/apps/vis/ParaView/repo/P=
araView/CoProcessing/CoProcessor/vtkCPPythonHelper.cxx, line 136<u></u><u><=
/u></p>
<p class=3D"MsoNormal">0x2B62188CFD9A: 48 8B 41 38 &=
nbsp; movq 56(%rcx),%=
rax<u></u><u></u></p>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal">which is:<u></u><u></u></p>
<p class=3D"MsoNormal">vtkPVPythonInterpretor* vtkCPPythonHelper::GetPython=
Interpretor()<u></u><u></u></p>
<p class=3D"MsoNormal">{<u></u><u></u></p>
<p class=3D"MsoNormal"> return Instance->PythonInterpretor;<u></u>=
<u></u></p>
<p class=3D"MsoNormal">}<u></u><u></u></p>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal">The call stack is<u></u><u></u></p>
<p class=3D"MsoNormal">vtkCPPythonHelper::GetPythonInterpretor() line 136 i=
n vtkCPPythonHelper.cxx<u></u><u></u></p>
<p class=3D"MsoNormal">vtkCPPythonScriptPipeline::Initialize(const char *) =
line 69 in vtkCPPythonScriptPipeline.cxx<u></u><u></u></p>
<p class=3D"MsoNormal">coprocessorinitialize_ line 88 in FortranAdaptorAPI.=
cxx<u></u><u></u></p>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal">So is an Instance not getting created? I have the sy=
stem python in my path.<u></u><u></u></p>
<p class=3D"MsoNormal"> <u></u><u></u></p>
<p class=3D"MsoNormal">Thanks,<u></u><u></u></p>
<p class=3D"MsoNormal">Mark<u></u><u></u></p>
</div>
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<p class=3D"MsoNormal"> <u></u><u></u></p>
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<p class=3D"MsoNormal"> <u></u><u></u></p>
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<p class=3D"MsoNormal"><u></u> <u></u></p>
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