No subject
Wed May 9 12:08:04 EDT 2012
different than the header files and libraries. By this I mean that it will
pick up the python header files and libraries from one version of python
and the python interpretor will be from a different version. I don't think
that's what's going on but you may want to check on that in CMake.
Andy
On Tue, Sep 11, 2012 at 11:21 AM, Vanmoer, Mark W <mvanmoer at illinois.edu>wr=
ote:
> Hi Andy,****
>
> ** **
>
> Sorry, I lost track of where I was in debugging. What I had was an
> openmpi/pgi debug build that passed the ctest -R CoPro tests. But the app
> I'm working on still crashes when trying to create a python interpreter.*=
*
> **
>
> ** **
>
> I started over from scratch working with the Wiki example, using gcc 4.4.=
6
> and mpich2 1.4.1p1.****
>
> ** **
>
> I have the C++ wiki example working with both the ParaView-3.14.1-Source
> tarball and with git commit 2537cabbf0cc9b39f17f347105ee18c559d0041a.****
>
> ** **
>
> I then made a Fortran version of the wiki example. It works with the
> ParaView-3.14.1-Source tarball build, but crashes when built against the
> git branch build. Seems to be at the same spot as the pgi build, when it
> tries to return the python interpreter instance. I stepped through with g=
db
> and don=92t see anything obvious. It seems to crash when it tries to crea=
te
> an interpreter to add the python script to the module search path.****
>
> ** **
>
> Mark****
>
> *From:* Andy Bauer [mailto:andy.bauer at kitware.com]
> *Sent:* Thursday, August 30, 2012 10:26 PM
> *To:* Vanmoer, Mark W
> *Cc:* paraview at paraview.org
> *Subject:* Re: [Paraview] Python interpreter not being created for
> coprocessing?****
>
> ** **
>
> Glad to hear that it's working. As for the parallel test failure, I think
> you can ignore that for now. I need to fix it but I just haven't gotten
> around to it yet. I think it's either a parallel rendering/compositing
> issue or a problem with the actors's visibility in the views getting
> screwed up. Both of those things are not my area of expertise so I've bee=
n
> reluctant to go and fix it. Now that you've publicly shamed me I'm going =
to
> have to bite the bullet and fix it :) Hopefully by the end of next week =
it
> will be fixed. I created a mantis issue (
> http://paraview.org/Bug/view.php?id=3D13417) if you want to follow it.
>
> Andy****
>
> On Thu, Aug 30, 2012 at 6:19 PM, Vanmoer, Mark W <mvanmoer at illinois.edu>
> wrote:****
>
> Hi Andy, ****
>
> Not sure what changed, but I was able to build pgi/openmpi and got to the
> point you did below, where the parallel test fails with =93CPGrid0 image
> compare failed.=94 ****
>
> Can I ignore this error? Anyway, the python interpreter seems to be
> created, so that issue is closed.****
>
> Mark****
>
> ****
>
> *From:* Andy Bauer [mailto:andy.bauer at kitware.com]
> *Sent:* Wednesday, August 29, 2012 12:15 PM****
>
>
> *To:* Vanmoer, Mark W
> *Cc:* paraview at paraview.org
> *Subject:* Re: [Paraview] Python interpreter not being created for
> coprocessing?****
>
> ****
>
> Ok, glad to hear that coprocessing is working in some fashion. Now to
> figure out how to get it running properly with your desired configuration=
.
> Unfortunately at this point I don't know how to move forward except for
> trying to piecemeal from having it working with GCC without everything yo=
u
> need to working with PGI, CUDA and everything else.
>
> Andy****
>
> On Tue, Aug 28, 2012 at 2:51 PM, Vanmoer, Mark W <mvanmoer at illinois.edu>
> wrote:****
>
> [mvanmoer at forge ParaView]$ git log origin/master | head -1****
>
> commit 2537cabbf0cc9b39f17f347105ee18c559d0041a****
>
> ****
>
> I should mention I do have a gcc, mvapich2 compiled version of
> coprocessing compiled on Forge and it works great. However any program
> built with PGI/openmpi code (required because of the CUDA Fortran) crashe=
s
> with MPI errors. That=92s why I was trying to build ParaView with
> PGI/openmpi. I guess I could try gcc/openmpi and see if that linked to
> pgi/openmpi will run. ****
>
> ****
>
> Mark****
>
> ****
>
> ****
>
> *From:* Andy Bauer [mailto:andy.bauer at kitware.com]
> *Sent:* Tuesday, August 28, 2012 12:19 PM****
>
>
> *To:* Vanmoer, Mark W
> *Cc:* paraview at paraview.org
> *Subject:* Re: [Paraview] Python interpreter not being created for
> coprocessing?****
>
> ****
>
> Hmm, ParaView has been undergoing a lot of changes lately so it's been a
> bit unstable. I just checked out a clean version and built it without any
> problems. The SHA from that was 2537cabbf0cc9b39f17f347105ee18c559d0041a.
> What version are you on?
>
> Have you tried building with GCC instead of PGI? I'm thinking of ways to
> simplify the build since I haven't tried building with PGI+CUDA+MPI+Pytho=
n
> myself.
>
> Andy****
>
> On Mon, Aug 27, 2012 at 3:31 PM, Vanmoer, Mark W <mvanmoer at illinois.edu>
> wrote:****
>
> Hi Andy, I just did a fresh git clone and ccmake gives me****
>
> Make Error at VTK/CMake/vtkModuleTop.cmake:29 (message):****
>
> No such module "vtkWrappingTools" needed by
> "vtkUtilitiesWrapClientServer"****
>
> Call Stack (most recent call first):****
>
> VTK/CMake/vtkModuleTop.cmake:45 (vtk_module_check)****
>
> VTK/CMake/vtkModuleTop.cmake:52 (vtk_module_check)****
>
> VTK/CMakeLists.txt:334 (include)****
>
> ****
>
> Mark****
>
> ****
>
> *From:* Andy Bauer [mailto:andy.bauer at kitware.com]
> *Sent:* Monday, August 27, 2012 11:59 AM****
>
>
> *To:* Vanmoer, Mark W
> *Cc:* paraview at paraview.org
> *Subject:* Re: [Paraview] Python interpreter not being created for
> coprocessing?****
>
> ****
>
> Hi Mark,
>
> With the modularization of VTK and ParaView the coprocessing tests were
> temporarily in a bad state. The serial ones are fixed now (the parallel
> runs but gives incorrect results for the screenshot). Is it possible for
> you to update your version of ParaView and retry this?
>
> Thanks,
> Andy****
>
> On Fri, Aug 24, 2012 at 4:03 PM, Vanmoer, Mark W <mvanmoer at illinois.edu>
> wrote:****
>
> Hi, I rebuilt with ParaViewData directory set and it=92s only finding 1 o=
ut
> 3 of the CoProcessing tests. Did I forget a step?****
>
> ****
>
> $ ctest --verbose --output-on-failure --output-log ctest.out -R CoProcess=
*
> ***
>
> ****
>
> UpdateCTestConfiguration from
> :/usr/apps/vis/ParaView/repo/withTesting/DartConfiguration.tcl****
>
> Parse Config
> file:/usr/apps/vis/ParaView/repo/withTesting/DartConfiguration.tcl****
>
> UpdateCTestConfiguration from
> :/usr/apps/vis/ParaView/repo/withTesting/DartConfiguration.tcl****
>
> Parse Config
> file:/usr/apps/vis/ParaView/repo/withTesting/DartConfiguration.tcl****
>
> Test project /usr/apps/vis/ParaView/repo/withTesting****
>
> Constructing a list of tests****
>
> Done constructing a list of tests****
>
> Checking test dependency graph...****
>
> Checking test dependency graph end****
>
> test 29****
>
> Start 29: vtkCoProcessor-HeaderTest****
>
> ****
>
> 29: Test command: /usr/bin/python
> "/usr/apps/vis/ParaView/repo/ParaView/VTK/Testing/Core/HeaderTesting.py"
> "/usr/apps/vis/ParaView/repo/ParaView/CoProcessing/Core"
> "VTKCOPROCESSOR_EXPORT"****
>
> 29: Test timeout computed to be: 1500****
>
> 29: Use export macro: VTKCOPROCESSOR_EXPORT****
>
> 1/3 Test #29: vtkCoProcessor-HeaderTest ........ Passed 0.37 sec***=
*
>
> test 100****
>
> Start 100: CoProcessingTestPythonScript****
>
> ****
>
> 100: Test command: /usr/apps/vis/CMake/2.8.9/bin/cmake "-Dcfg=3DRelease"
> "-P"
> "/usr/apps/vis/ParaView/repo/withTesting/CoProcessing/CoProcessingTestPyt=
honScript.cmake"
> ****
>
> 100: Test timeout computed to be: 1500****
>
> 100: CMake Error at
> /usr/apps/vis/ParaView/repo/withTesting/CoProcessing/CoProcessingTestPyth=
onScript.cmake:6
> (message):****
>
> 100: ****
>
> 100:
> '/usr/apps/vis/ParaView/repo/withTesting/ThirdParty/protobuf/vtkprotobuf/=
bin/Release/CoProcessingPythonScriptExample.exe'
> ****
>
> 100: does not exist****
>
> 100: ****
>
> 100: ****
>
> 2/3 Test #100: CoProcessingTestPythonScript .....***Failed 0.79 sec***=
*
>
> CMake Error at
> /usr/apps/vis/ParaView/repo/withTesting/CoProcessing/CoProcessingTestPyth=
onScript.cmake:6
> (message):****
>
> ****
>
>
> '/usr/apps/vis/ParaView/repo/withTesting/ThirdParty/protobuf/vtkprotobu=
f/bin/Release/CoProcessingPythonScriptExample.exe'
> ****
>
> does not exist****
>
> ****
>
> ****
>
> ****
>
> test 101****
>
> Start 101: PCoProcessingTestPythonScript****
>
> ****
>
> 101: Test command: /usr/apps/vis/CMake/2.8.9/bin/cmake "-Dcfg=3DRelease"
> "-P"
> "/usr/apps/vis/ParaView/repo/withTesting/CoProcessing/PCoProcessingTestPy=
thonScript.cmake"
> ****
>
> 101: Test timeout computed to be: 1500****
>
> 101: CMake Error at
> /usr/apps/vis/ParaView/repo/withTesting/CoProcessing/PCoProcessingTestPyt=
honScript.cmake:6
> (message):****
>
> 101: ****
>
> 101:
> '/usr/apps/vis/ParaView/repo/withTesting/ThirdParty/protobuf/vtkprotobuf/=
bin/Release/CoProcessingPythonScriptExample.exe'
> ****
>
> 101: does not exist****
>
> 101: ****
>
> 101: ****
>
> 3/3 Test #101: PCoProcessingTestPythonScript ....***Failed 0.01 sec***=
*
>
> CMake Error at
> /usr/apps/vis/ParaView/repo/withTesting/CoProcessing/PCoProcessingTestPyt=
honScript.cmake:6
> (message):****
>
> ****
>
>
> '/usr/apps/vis/ParaView/repo/withTesting/ThirdParty/protobuf/vtkprotobu=
f/bin/Release/CoProcessingPythonScriptExample.exe'
> ****
>
> does not exist****
>
> ****
>
> ****
>
> ****
>
> ****
>
> The following tests passed:****
>
> vtkCoProcessor-HeaderTest****
>
> ****
>
> 33% tests passed, 2 tests failed out of 3****
>
> ****
>
> Total Test time (real) =3D 8.14 sec****
>
> ****
>
> The following tests FAILED:****
>
> 100 - CoProcessingTestPythonScript (Failed)****
>
> 101 - PCoProcessingTestPythonScript (Failed)****
>
> Errors while running CTest****
>
> ****
>
> Mark****
>
> *From:* Andy Bauer [mailto:andy.bauer at kitware.com]
> *Sent:* Thursday, August 23, 2012 3:06 PM****
>
>
> *To:* Vanmoer, Mark W
> *Cc:* paraview at paraview.org
> *Subject:* Re: [Paraview] Python interpreter not being created for
> coprocessing?****
>
> ****
>
> ****
>
> On Thu, Aug 23, 2012 at 4:00 PM, Vanmoer, Mark W <mvanmoer at illinois.edu>
> wrote:****
>
> Two questions =96 is there a way to tell ctest where the ParaViewData is
> without having to go back into cmake and rebuilding?****
>
>
> Not possible for most, if not all, tests. The reason is that the test
> doesn't get added unless ParaViewData is available.
> ****
>
> And 2, is there a way to tell ctest to not use MPIEXEC_MAX_NUMPROCS when
> running tests?****
>
>
> Many parallel tests, including the parallel coprocessing test, usually
> just have it hard coded to use 2 or 4 processes for testing.
> ****
>
> ****
>
> Mark****
>
> *From:* Andy Bauer [mailto:andy.bauer at kitware.com]
> *Sent:* Thursday, August 23, 2012 1:32 PM****
>
>
> *To:* Vanmoer, Mark W
> *Cc:* paraview at paraview.org
> *Subject:* Re: [Paraview] Python interpreter not being created for
> coprocessing?****
>
> ****
>
> It looks like you've built it properly. At least I don't see anything tha=
t
> looks wrong. I think the reason you didn't get any coprocessing tests is
> that they depend on ParaViewDAta. Maybe the next step is to download
> ParaViewData (git://paraview.org/ParaViewData.git) and then set the
> location ParaViewData in cmake. After that, run the coprocessing tests
> (ctest -R CoProcess) and show me the output from that.
>
> Andy****
>
> On Wed, Aug 22, 2012 at 12:26 PM, Vanmoer, Mark W <mvanmoer at illinois.edu>
> wrote:****
>
> Hi Andy,****
>
> ****
>
> I set PARAVIEW_ENABLE_PYTHON to ON, is more needed? It did build pvpython=
,
> I don=92t know if that=92s separate thing entirely, though.****
>
> $ pvserver =96version****
>
> paraview version 3.14.1-1549-g5f34f40****
>
> ****
>
> $ python =96version****
>
> Python 2.6.6****
>
> ****
>
> $ cmake =96version****
>
> cmake version 2.8.9****
>
> ****
>
> CMakeCache.txt is attached.****
>
> ****
>
> I also just noticed that ctest =96R CoProcessing returns No tests were
> found!!!, yet it does have other tests.****
>
> Let me know what else you need.****
>
> ****
>
> Mark****
>
> ****
>
> *From:* Andy Bauer [mailto:andy.bauer at kitware.com]
> *Sent:* Wednesday, August 22, 2012 10:49 AM
> *To:* Vanmoer, Mark W
> *Cc:* paraview at paraview.org
> *Subject:* Re: [Paraview] Python interpreter not being created for
> coprocessing?****
>
> ****
>
> Hi Mark,
>
> I think I can guess what the problem is but can't be certain without some
> more information. My guess is that you're using ParaView 3.14.1 for this
> and you're trying to use the fortran interface but haven't built ParaView
> with Python enabled. There were some dependency issues there that have be=
en
> ironed out since then though. If that's not the case though I'll need mor=
e
> information on versions and maybe sending your CMakeCache.txt in your
> ParaView build directory.
>
> Andy****
>
> On Wed, Aug 22, 2012 at 11:12 AM, Vanmoer, Mark W <mvanmoer at illinois.edu>
> wrote:****
>
> Hello,****
>
> ****
>
> I'm setting up someone's code to use coprocessing with OSMesa and
> openmpi/pgi/cuda fortran on NCSA's Forge using ParaView from the git repo=
.
> I'm getting segfaults and pgdbg gives me this error when
> coprocessorinitialize is called:****
>
> ****
>
> [0] Signalled SIGSEGV at 0x2B62188CFD9A, function
> vtkCPPythonHelper::GetPythonInterpretor(), file
> /usr/apps/vis/ParaView/repo/ParaView/CoProcessing/CoProcessor/vtkCPPython=
Helper.cxx,
> line 136****
>
> 0x2B62188CFD9A: 48 8B 41 38 movq 56(%rcx),%rax****
>
> ****
>
> which is:****
>
> vtkPVPythonInterpretor* vtkCPPythonHelper::GetPythonInterpretor()****
>
> {****
>
> return Instance->PythonInterpretor;****
>
> }****
>
> ****
>
> The call stack is****
>
> vtkCPPythonHelper::GetPythonInterpretor() line 136 in vtkCPPythonHelper.c=
xx
> ****
>
> vtkCPPythonScriptPipeline::Initialize(const char *) line 69 in
> vtkCPPythonScriptPipeline.cxx****
>
> coprocessorinitialize_ line 88 in FortranAdaptorAPI.cxx****
>
> ****
>
> ****
>
> So is an Instance not getting created? I have the system python in my pat=
h.
> ****
>
> ****
>
> Thanks,****
>
> Mark****
>
>
> _______________________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Please keep messages on-topic and check the ParaView Wiki at:
> http://paraview.org/Wiki/ParaView
>
> Follow this link to subscribe/unsubscribe:
> http://www.paraview.org/mailman/listinfo/paraview****
>
> ****
>
> ****
>
> ****
>
> ****
>
> ****
>
> ****
>
> ** **
>
--20cf307ca38634eb4804c984fdfe
Content-Type: text/html; charset=windows-1252
Content-Transfer-Encoding: quoted-printable
Can you send me your Fortran version of the wiki example?<br><br>From what =
I remember, CMake treats the Python interpretor/executable different than t=
he header files and libraries. By this I mean that it will pick up the pyth=
on header files and libraries from one version of python and the python int=
erpretor will be from a different version. I don't think that's wha=
t's going on but you may want to check on that in CMake.<br>
<br>Andy<br><br><div class=3D"gmail_quote">On Tue, Sep 11, 2012 at 11:21 AM=
, Vanmoer, Mark W <span dir=3D"ltr"><<a href=3D"mailto:mvanmoer at illinois=
.edu" target=3D"_blank">mvanmoer at illinois.edu</a>></span> wrote:<br><blo=
ckquote class=3D"gmail_quote" style=3D"margin:0 0 0 .8ex;border-left:1px #c=
cc solid;padding-left:1ex">
<div link=3D"blue" vlink=3D"purple" lang=3D"EN-US">
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Hi Andy,<u></u><u></u></s=
pan></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d"><u></u>=A0<u></u></span><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Sorry, I lost track of wh=
ere I was in debugging. What I had was an openmpi/pgi debug build that pass=
ed the ctest -R CoPro tests. But the app I'm working on
still crashes when trying to create a python interpreter.<u></u><u></u></s=
pan></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d"><u></u>=A0<u></u></span><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">I started over from scrat=
ch working with the Wiki example, using gcc 4.4.6 and mpich2 1.4.1p1.<u></u=
><u></u></span></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d"><u></u>=A0<u></u></span><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">I have the C++ wiki examp=
le working with both the ParaView-3.14.1-Source tarball and with git commit=
2537cabbf0cc9b39f17f347105ee18c559d0041a.<u></u><u></u></span></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d"><u></u>=A0<u></u></span><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">I then made a Fortran ver=
sion of the wiki example. It works with the ParaView-3.14.1-Source tarball =
build, but crashes when built against the git branch build.
Seems to be at the same spot as the pgi build, when it tries to return the=
python interpreter instance. I stepped through with gdb and don=92t see an=
ything obvious. It seems to crash when it tries to create an interpreter to=
add the python script to the module
search path.<u></u><u></u></span></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d"><u></u>=A0<u></u></span><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Mark<u></u><u></u></span>=
</p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt;font-family:"=
;Tahoma","sans-serif"">From:</span></b><span style=3D"font-s=
ize:10.0pt;font-family:"Tahoma","sans-serif""> Andy Bau=
er
</span><a href=3D"mailto:[mailto:andy.bauer at kitware.com]" target=3D"_blank"=
><span style=3D"font-size:10.0pt;font-family:"Tahoma","sans-=
serif"">[mailto:andy.bauer at kitware.com]</span></a><span style=3D"font-=
size:10.0pt;font-family:"Tahoma","sans-serif"">
<br>
<b>Sent:</b> Thursday, August 30, 2012 10:26 PM<br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> </span><a href=3D"mailto:paraview at paraview.org" target=3D"_blank=
"><span style=3D"font-size:10.0pt;font-family:"Tahoma","sans=
-serif"">paraview at paraview.org</span></a><span style=3D"font-size:10.0=
pt;font-family:"Tahoma","sans-serif""><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?<u></u><u></u></span></p>
<p class=3D"MsoNormal"><u></u>=A0<u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt">Glad to hear that it&=
#39;s working. As for the parallel test failure, I think you can ignore tha=
t for now. I need to fix it but I just haven't gotten around to it yet.=
I think it's either a parallel rendering/compositing
issue or a problem with the actors's visibility in the views getting s=
crewed up. Both of those things are not my area of expertise so I've be=
en reluctant to go and fix it. Now that you've publicly shamed me I'=
;m going to have to bite the bullet and fix it :)=A0
Hopefully by the end of next week it will be fixed. I created a mantis iss=
ue (<a href=3D"http://paraview.org/Bug/view.php?id=3D13417" target=3D"_blan=
k">http://paraview.org/Bug/view.php?id=3D13417</a>) if you want to follow i=
t.<br>
<br>
Andy<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Thu, Aug 30, 2012 at 6:19 PM, Vanmoer, Mark W <=
;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illino=
is.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Hi Andy,
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Not sure what changed, bu=
t I was able to build pgi/openmpi and got to the point you did below, where
the parallel test fails with =93CPGrid0 image compare failed.=94 </span><u=
></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Can I ignore this error? =
Anyway, the python interpreter seems to be created, so that issue is closed=
.</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Mark</span><u></u><u></u>=
</p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt;font-family:"=
;Tahoma","sans-serif"">From:</span></b><span style=3D"font-s=
ize:10.0pt;font-family:"Tahoma","sans-serif""> Andy Bau=
er [mailto:</span><a href=3D"mailto:andy.bauer at kitware.com" target=3D"_blan=
k"><span style=3D"font-size:10.0pt;font-family:"Tahoma","san=
s-serif"">andy.bauer at kitware.com</span></a><span style=3D"font-size:10=
.0pt;font-family:"Tahoma","sans-serif"">]
<br>
<b>Sent:</b> Wednesday, August 29, 2012 12:15 PM</span><u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> <a href=3D"mailto:paraview at paraview.org" target=3D"_blank">parav=
iew at paraview.org</a><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?<u></u><u></u></p>
</div>
</div>
<div>
<div>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt">Ok, glad to hear that=
coprocessing is working in some fashion. Now to figure out how to get it r=
unning properly with your desired configuration. Unfortunately at this poin=
t I don't know
how to move forward except for trying to piecemeal from having it working =
with GCC without everything you need to working with PGI, CUDA and everythi=
ng else.<br>
<br>
Andy<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Tue, Aug 28, 2012 at 2:51 PM, Vanmoer, Mark W <=
;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illino=
is.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">[mvanmoer at forge ParaView]=
$ git log origin/master | head -1</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">commit 2537cabbf0cc9b39f1=
7f347105ee18c559d0041a</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">I should mention I do hav=
e a gcc, mvapich2 compiled version of coprocessing compiled on Forge and
it works great. However any program built with PGI/openmpi code (required =
because of the CUDA Fortran) crashes with MPI errors. That=92s why I was tr=
ying to build ParaView with PGI/openmpi. I guess I could try gcc/openmpi an=
d see if that linked to pgi/openmpi
will run. </span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Mark</span><u></u><u></u>=
</p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt;font-family:"=
;Tahoma","sans-serif"">From:</span></b><span style=3D"font-s=
ize:10.0pt;font-family:"Tahoma","sans-serif""> Andy Bau=
er [mailto:</span><a href=3D"mailto:andy.bauer at kitware.com" target=3D"_blan=
k"><span style=3D"font-size:10.0pt;font-family:"Tahoma","san=
s-serif"">andy.bauer at kitware.com</span></a><span style=3D"font-size:10=
.0pt;font-family:"Tahoma","sans-serif"">]
<br>
<b>Sent:</b> Tuesday, August 28, 2012 12:19 PM</span><u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> <a href=3D"mailto:paraview at paraview.org" target=3D"_blank">parav=
iew at paraview.org</a><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?<u></u><u></u></p>
</div>
</div>
<div>
<div>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt">Hmm, ParaView has bee=
n undergoing a lot of changes lately so it's been a bit unstable. I jus=
t checked out a clean version and built it without any problems. The SHA fr=
om that was 2537cabbf0cc9b39f17f347105ee18c559d0041a.
What version are you on?<br>
<br>
Have you tried building with GCC instead of PGI? I'm thinking of ways t=
o simplify the build since I haven't tried building with PGI+CUDA+MPI+P=
ython myself.<br>
<br>
Andy<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Mon, Aug 27, 2012 at 3:31 PM, Vanmoer, Mark W <=
;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illino=
is.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Hi Andy, I just did a fre=
sh git clone and ccmake gives me</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Make Error at VTK/CMake/v=
tkModuleTop.cmake:29 (message):</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0=A0 No such module &qu=
ot;vtkWrappingTools" needed by "vtkUtilitiesWrapClientServer"=
;</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Call Stack (most recent c=
all first):</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0=A0 VTK/CMake/vtkModul=
eTop.cmake:45 (vtk_module_check)</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0=A0 VTK/CMake/vtkModul=
eTop.cmake:52 (vtk_module_check)</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0=A0 VTK/CMakeLists.txt=
:334 (include)</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Mark</span><u></u><u></u>=
</p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt;font-family:"=
;Tahoma","sans-serif"">From:</span></b><span style=3D"font-s=
ize:10.0pt;font-family:"Tahoma","sans-serif""> Andy Bau=
er [mailto:</span><a href=3D"mailto:andy.bauer at kitware.com" target=3D"_blan=
k"><span style=3D"font-size:10.0pt;font-family:"Tahoma","san=
s-serif"">andy.bauer at kitware.com</span></a><span style=3D"font-size:10=
.0pt;font-family:"Tahoma","sans-serif"">]
<br>
<b>Sent:</b> Monday, August 27, 2012 11:59 AM</span><u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> <a href=3D"mailto:paraview at paraview.org" target=3D"_blank">parav=
iew at paraview.org</a><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?<u></u><u></u></p>
</div>
</div>
<div>
<div>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt">Hi Mark,<br>
<br>
With the modularization of VTK and ParaView the coprocessing tests were tem=
porarily in a bad state. The serial ones are fixed now (the parallel runs b=
ut gives incorrect results for the screenshot). Is it possible for you to u=
pdate your version of ParaView and
retry this?<br>
<br>
Thanks,<br>
Andy<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Fri, Aug 24, 2012 at 4:03 PM, Vanmoer, Mark W <=
;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illino=
is.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Hi, I rebuilt with ParaVi=
ewData directory set and it=92s only finding 1 out 3 of the CoProcessing te=
sts.
Did I forget a step?</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">$ ctest --verbose --outpu=
t-on-failure --output-log ctest.out -R CoProcess</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">UpdateCTestConfiguration=
=A0 from :/usr/apps/vis/ParaView/repo/withTesting/DartConfiguration.tcl</sp=
an><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Parse Config file:/usr/ap=
ps/vis/ParaView/repo/withTesting/DartConfiguration.tcl</span><u></u><u></u>=
</p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">UpdateCTestConfiguration=
=A0 from :/usr/apps/vis/ParaView/repo/withTesting/DartConfiguration.tcl</sp=
an><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Parse Config file:/usr/ap=
ps/vis/ParaView/repo/withTesting/DartConfiguration.tcl</span><u></u><u></u>=
</p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Test project /usr/apps/vi=
s/ParaView/repo/withTesting</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Constructing a list of te=
sts</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Done constructing a list =
of tests</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Checking test dependency =
graph...</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Checking test dependency =
graph end</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">test 29</span><u></u><u><=
/u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0=A0=A0 Start=A0 29: vt=
kCoProcessor-HeaderTest</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">29: Test command: /usr/bi=
n/python "/usr/apps/vis/ParaView/repo/ParaView/VTK/Testing/Core/Header=
Testing.py"
"/usr/apps/vis/ParaView/repo/ParaView/CoProcessing/Core" "V=
TKCOPROCESSOR_EXPORT"</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">29: Test timeout computed=
to be: 1500</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">29: Use export macro: VTK=
COPROCESSOR_EXPORT</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">1/3 Test=A0 #29: vtkCoPro=
cessor-HeaderTest ........=A0=A0 Passed=A0=A0=A0 0.37 sec</span><u></u><u><=
/u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">test 100</span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0=A0=A0 Start 100: CoPr=
ocessingTestPythonScript</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">100: Test command: /usr/a=
pps/vis/CMake/2.8.9/bin/cmake "-Dcfg=3DRelease" "-P" &q=
uot;/usr/apps/vis/ParaView/repo/withTesting/CoProcessing/CoProcessingTestPy=
thonScript.cmake"</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">100: Test timeout compute=
d to be: 1500</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">100: CMake Error at /usr/=
apps/vis/ParaView/repo/withTesting/CoProcessing/CoProcessingTestPythonScrip=
t.cmake:6
(message):</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">100:=A0=A0
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">100:=A0=A0 '/usr/apps=
/vis/ParaView/repo/withTesting/ThirdParty/protobuf/vtkprotobuf/bin/Release/=
CoProcessingPythonScriptExample.exe'</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">100:=A0=A0 does not exist=
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">100:
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">100:
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">2/3 Test #100: CoProcessi=
ngTestPythonScript .....***Failed=A0=A0=A0 0.79 sec</span><u></u><u></u></p=
>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">CMake Error at /usr/apps/=
vis/ParaView/repo/withTesting/CoProcessing/CoProcessingTestPythonScript.cma=
ke:6
(message):</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0=A0'/usr/apps/vis/=
ParaView/repo/withTesting/ThirdParty/protobuf/vtkprotobuf/bin/Release/CoPro=
cessingPythonScriptExample.exe'</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0 does not exist</span>=
<u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">test 101</span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0=A0=A0 Start 101: PCoP=
rocessingTestPythonScript</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">101: Test command: /usr/a=
pps/vis/CMake/2.8.9/bin/cmake "-Dcfg=3DRelease" "-P" &q=
uot;/usr/apps/vis/ParaView/repo/withTesting/CoProcessing/PCoProcessingTestP=
ythonScript.cmake"</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">101: Test timeout compute=
d to be: 1500</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">101: CMake Error at /usr/=
apps/vis/ParaView/repo/withTesting/CoProcessing/PCoProcessingTestPythonScri=
pt.cmake:6
(message):</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">101:=A0=A0
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">101:=A0=A0 '/usr/apps=
/vis/ParaView/repo/withTesting/ThirdParty/protobuf/vtkprotobuf/bin/Release/=
CoProcessingPythonScriptExample.exe'</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">101:=A0=A0 does not exist=
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">101:
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">101:
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">3/3 Test #101: PCoProcess=
ingTestPythonScript ....***Failed=A0=A0=A0 0.01 sec</span><u></u><u></u></p=
>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">CMake Error at /usr/apps/=
vis/ParaView/repo/withTesting/CoProcessing/PCoProcessingTestPythonScript.cm=
ake:6
(message):</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0
</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0=A0'/usr/apps/vis/=
ParaView/repo/withTesting/ThirdParty/protobuf/vtkprotobuf/bin/Release/CoPro=
cessingPythonScriptExample.exe'</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0 does not exist</span>=
<u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">The following tests passe=
d:</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0=A0=A0=A0=A0=A0=A0=A0=
=A0=A0=A0=A0=A0=A0=A0 vtkCoProcessor-HeaderTest</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">33% tests passed, 2 tests=
failed out of 3</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Total Test time (real) =
=3D=A0=A0 8.14 sec</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">The following tests FAILE=
D:</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0=A0=A0=A0=A0=A0=A0=A0=
=A0=A0=A0=A0=A0=A0=A0 100 - CoProcessingTestPythonScript (Failed)</span><u>=
</u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0=A0=A0=A0=A0=A0=A0=A0=
=A0=A0=A0=A0=A0=A0=A0 101 - PCoProcessingTestPythonScript (Failed)</span><u=
></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Errors while running CTes=
t</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Mark</span><u></u><u></u>=
</p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt;font-family:"=
;Tahoma","sans-serif"">From:</span></b><span style=3D"font-s=
ize:10.0pt;font-family:"Tahoma","sans-serif""> Andy Bau=
er [mailto:</span><a href=3D"mailto:andy.bauer at kitware.com" target=3D"_blan=
k"><span style=3D"font-size:10.0pt;font-family:"Tahoma","san=
s-serif"">andy.bauer at kitware.com</span></a><span style=3D"font-size:10=
.0pt;font-family:"Tahoma","sans-serif"">]
<br>
<b>Sent:</b> Thursday, August 23, 2012 3:06 PM</span><u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> <a href=3D"mailto:paraview at paraview.org" target=3D"_blank">parav=
iew at paraview.org</a><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?<u></u><u></u></p>
</div>
</div>
<div>
<div>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt">=A0<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Thu, Aug 23, 2012 at 4:00 PM, Vanmoer, Mark W <=
;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illino=
is.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Two questions =96 is ther=
e a way to tell ctest where the ParaViewData is without having to go back
into cmake and rebuilding?</span><u></u><u></u></p>
</div>
</div>
<div>
<p class=3D"MsoNormal"><br>
Not possible for most, if not all, tests. The reason is that the test doesn=
't get added unless ParaViewData is available.<br>
=A0<u></u><u></u></p>
</div>
<blockquote style=3D"border:none;border-left:solid #cccccc 1.0pt;padding:0i=
n 0in 0in 6.0pt;margin-left:4.8pt;margin-top:5.0pt;margin-right:0in;margin-=
bottom:5.0pt">
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">And 2, is there a way to =
tell ctest to not use MPIEXEC_MAX_NUMPROCS when running tests?</span><u></u=
><u></u></p>
</div>
</div>
</blockquote>
<div>
<p class=3D"MsoNormal"><br>
Many parallel tests, including the parallel coprocessing test, usually just=
have it hard coded to use 2 or 4 processes for testing.<br>
=A0<u></u><u></u></p>
</div>
<blockquote style=3D"border:none;border-left:solid #cccccc 1.0pt;padding:0i=
n 0in 0in 6.0pt;margin-left:4.8pt;margin-top:5.0pt;margin-right:0in;margin-=
bottom:5.0pt">
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Mark</span><u></u><u></u>=
</p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt;font-family:"=
;Tahoma","sans-serif"">From:</span></b><span style=3D"font-s=
ize:10.0pt;font-family:"Tahoma","sans-serif""> Andy Bau=
er [mailto:</span><a href=3D"mailto:andy.bauer at kitware.com" target=3D"_blan=
k"><span style=3D"font-size:10.0pt;font-family:"Tahoma","san=
s-serif"">andy.bauer at kitware.com</span></a><span style=3D"font-size:10=
.0pt;font-family:"Tahoma","sans-serif"">]
<br>
<b>Sent:</b> Thursday, August 23, 2012 1:32 PM</span><u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> <a href=3D"mailto:paraview at paraview.org" target=3D"_blank">parav=
iew at paraview.org</a><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?<u></u><u></u></p>
</div>
</div>
<div>
<div>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt">It looks like you'=
;ve built it properly. At least I don't see anything that looks wrong. =
I think the reason you didn't get any coprocessing tests is that they d=
epend on ParaViewDAta. Maybe
the next step is to download ParaViewData (git://<a href=3D"http://paravie=
w.org/ParaViewData.git" target=3D"_blank">paraview.org/ParaViewData.git</a>=
) and then set the location ParaViewData in cmake. After that, run the copr=
ocessing tests (ctest -R CoProcess)
and show me the output from that.<br>
<br>
Andy<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Wed, Aug 22, 2012 at 12:26 PM, Vanmoer, Mark W &l=
t;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illin=
ois.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Hi Andy,</span><u></u><u>=
</u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">I set PARAVIEW_ENABLE_PYT=
HON to ON, is more needed? It did build pvpython, I don=92t know if that=92=
s
separate thing entirely, though.</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">$ pvserver =96version</sp=
an><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">paraview version 3.14.1-1=
549-g5f34f40</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">$ python =96version</span=
><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Python 2.6.6</span><u></u=
><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">$ cmake =96version</span>=
<u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">cmake version 2.8.9</span=
><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">CMakeCache.txt is attache=
d.</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">I also just noticed that =
ctest =96R CoProcessing returns No tests were found!!!, yet it does have ot=
her
tests.</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Let me know what else you=
need.</span><u></u><u></u></p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">Mark</span><u></u><u></u>=
</p>
<p class=3D"MsoNormal"><span style=3D"font-size:11.0pt;font-family:"Ca=
libri","sans-serif";color:#1f497d">=A0</span><u></u><u></u><=
/p>
<p class=3D"MsoNormal"><b><span style=3D"font-size:10.0pt;font-family:"=
;Tahoma","sans-serif"">From:</span></b><span style=3D"font-s=
ize:10.0pt;font-family:"Tahoma","sans-serif""> Andy Bau=
er [mailto:</span><a href=3D"mailto:andy.bauer at kitware.com" target=3D"_blan=
k"><span style=3D"font-size:10.0pt;font-family:"Tahoma","san=
s-serif"">andy.bauer at kitware.com</span></a><span style=3D"font-size:10=
.0pt;font-family:"Tahoma","sans-serif"">]
<br>
<b>Sent:</b> Wednesday, August 22, 2012 10:49 AM<br>
<b>To:</b> Vanmoer, Mark W<br>
<b>Cc:</b> </span><a href=3D"mailto:paraview at paraview.org" target=3D"_blank=
"><span style=3D"font-size:10.0pt;font-family:"Tahoma","sans=
-serif"">paraview at paraview.org</span></a><span style=3D"font-size:10.0=
pt;font-family:"Tahoma","sans-serif""><br>
<b>Subject:</b> Re: [Paraview] Python interpreter not being created for cop=
rocessing?</span><u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt">Hi Mark,<br>
<br>
I think I can guess what the problem is but can't be certain without so=
me more information. My guess is that you're using ParaView 3.14.1 for =
this and you're trying to use the fortran interface but haven't bui=
lt ParaView with Python enabled. There were some
dependency issues there that have been ironed out since then though. If th=
at's not the case though I'll need more information on versions and=
maybe sending your CMakeCache.txt in your ParaView build directory.<br>
<br>
Andy<u></u><u></u></p>
<div>
<p class=3D"MsoNormal">On Wed, Aug 22, 2012 at 11:12 AM, Vanmoer, Mark W &l=
t;<a href=3D"mailto:mvanmoer at illinois.edu" target=3D"_blank">mvanmoer at illin=
ois.edu</a>> wrote:<u></u><u></u></p>
<div>
<div>
<p class=3D"MsoNormal">Hello,<u></u><u></u></p>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
<p class=3D"MsoNormal">I'm setting up someone's code to use coproce=
ssing with OSMesa and openmpi/pgi/cuda fortran on NCSA's Forge using Pa=
raView from the git repo. I'm getting segfaults and pgdbg gives
me this error when coprocessorinitialize is called:<u></u><u></u></p>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
<p class=3D"MsoNormal">[0] Signalled SIGSEGV at 0x2B62188CFD9A, function vt=
kCPPythonHelper::GetPythonInterpretor(), file /usr/apps/vis/ParaView/repo/P=
araView/CoProcessing/CoProcessor/vtkCPPythonHelper.cxx,
line 136<u></u><u></u></p>
<p class=3D"MsoNormal">0x2B62188CFD9A:=A0 48 8B 41 38=A0=A0=A0=A0=A0=A0=A0=
=A0=A0=A0=A0 movq=A0=A0 56(%rcx),%rax<u></u><u></u></p>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
<p class=3D"MsoNormal">which is:<u></u><u></u></p>
<p class=3D"MsoNormal">vtkPVPythonInterpretor* vtkCPPythonHelper::GetPython=
Interpretor()<u></u><u></u></p>
<p class=3D"MsoNormal">{<u></u><u></u></p>
<p class=3D"MsoNormal">=A0 return Instance->PythonInterpretor;<u></u><u>=
</u></p>
<p class=3D"MsoNormal">}<u></u><u></u></p>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
<p class=3D"MsoNormal">The call stack is<u></u><u></u></p>
<p class=3D"MsoNormal">vtkCPPythonHelper::GetPythonInterpretor() line 136 i=
n vtkCPPythonHelper.cxx<u></u><u></u></p>
<p class=3D"MsoNormal">vtkCPPythonScriptPipeline::Initialize(const char *) =
line 69 in vtkCPPythonScriptPipeline.cxx<u></u><u></u></p>
<p class=3D"MsoNormal">coprocessorinitialize_ line 88 in FortranAdaptorAPI.=
cxx<u></u><u></u></p>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
<p class=3D"MsoNormal">So is an Instance not getting created? I have the sy=
stem python in my path.<u></u><u></u></p>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
<p class=3D"MsoNormal">Thanks,<u></u><u></u></p>
<p class=3D"MsoNormal">Mark<u></u><u></u></p>
</div>
</div>
<p class=3D"MsoNormal" style=3D"margin-bottom:12.0pt"><br>
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<br>
Please keep messages on-topic and check the ParaView Wiki at: <a href=3D"ht=
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</div>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
</div>
</div>
</div>
</div>
</div>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
</div>
</div>
</div>
</div>
</blockquote>
</div>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
</div>
</div>
</div>
</div>
</div>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
</div>
</div>
</div>
</div>
</div>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
</div>
</div>
</div>
</div>
</div>
<p class=3D"MsoNormal">=A0<u></u><u></u></p>
</div>
</div>
</div>
</div>
</div>
<p class=3D"MsoNormal"><u></u>=A0<u></u></p>
</div>
</div>
</blockquote></div><br>
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