[Paraview] ParaView 3.8.1 and HDF5

Wed Jan 12 08:09:17 EST 2011

Hello,

thanks a lot for your help. I have put the ETX and BTX around the line and now the compilation works.

best regards, 
nathalie

________________________________________
Von: Jerome Soumagne [soumagne at cscs.ch]
Gesendet: Dienstag, 11. Januar 2011 23:42
Bis: Biddiscombe, John A.
Cc: Rauschmayr, Nathalie; paraview at paraview.org
Betreff: Re: [Paraview] ParaView 3.8.1 and HDF5

Hi Nathalie,

I just checked what we had done with our last user and yes putting //BTX
and //ETX around the line 99 in vtkDsmManager.h will fix it. We forgot
to put this fix in the tarball. It is fixed in the Icarus git master
branch though.

The icarus plugin on hpcforge and the cscs-release branch  are still
compatible, be sure to do a git submodule update --init so that you get
the right versions of the different submodules:

git clone git://git.cscs.ch/ParaView.git
git checkout cscs-release
git submodule update --init

Everything should be working then.

Jerome

On 01/11/2011 10:54 PM, Biddiscombe, John A. wrote:
> I'm guessing ....
>
> It looks like you've got paraview+stuff on the master (cscs-release) branch, but the icarus plugin is no longer compatible. We are building against our not yet released 'steering' branch, but left our developments in icarus on the master branch.
>
> suggestion. Do a git log of paraview, see the most recent date, then update icarus to a date around then (ie go back to the same date) - does the compilation work?
>
> it looks like we messed up - so far we have only a small number of users/collaborators, so didn't quite expect anyone else to build the lot. We'll make the steering stuff available asap. please bear with us, we're struggling to get our stuff ready for others to use ...
>
> JB
>
> -----Original Message-----
> From: Nathalie.Rauschmayr at dlr.de [mailto:Nathalie.Rauschmayr at dlr.de]
> Sent: 11 January 2011 20:48
> To: Biddiscombe, John A.; paraview at paraview.org
> Subject: AW: ParaView 3.8.1 and HDF5
>
> Hello,
>
> thanks a lot for the hint. I have already expected, that there a some problems with ParaView's Xdmf.
> But I have still one more question:
> I've downloaded and installed your modified ParaView now. I've tried to install the Icarus-Plugin, but I get always the following compilation error:
>
>       syntax error
>       *** SYNTAX ERROR found in parsing the header file /home/nathalie/Desktop/Icarus-0.9.0/vtkDSMManager.h before line 99 ***
>       make[2]: *** [vtkDSMManagerClientServer.cxx] Error 1
>       make[1]: *** [CMakeFiles/CSCS_DSM.dir/all] Error 2
>
> This failure occures, wehen vtkGetMacro is called.
> I'm not sure what occurs the failure.
> Can you help me, please?
>
> best reagrds,
> nathalie
> ________________________________________
> Von: Biddiscombe, John A. [biddisco at cscs.ch]
> Gesendet: Montag, 10. Januar 2011 14:29
> Bis: Rauschmayr, Nathalie; paraview at paraview.org
> Betreff: RE: ParaView 3.8.1 and HDF5
>
> Nathalie
>
> The HDF5 you are using is our 'modified' one which supports external VFD compilation (such as the H5FDdsm code). paraview works fine with it, but the Xdmf that comes with paraview by default won't compile against it.
>
> Our instructions/documentation so far are not very complete but we are working on it. We have a couple of deadlines to meet over the next couple of weeks so can't really help you out right now, but once we get the full docs written up, we will make sure you are cc'd.
>
> To cut a long story short, we have our own paraview, with a modified Xdmf, git://git.cscs.ch/ParaView.git - submodules are different from the kitware versions for Xdmf, hdf etc. You may have more luck using the 'cscs-release' branch from there (it's a bit old, but was tested by 3rd parties and worked).
>
> In a couple of weeks we ought to have things stable enough to update all the wikis etc (and branches) with the correct info for building and testing
>
> JB
>
>
> -----Original Message-----
> From: paraview-bounces at paraview.org [mailto:paraview-bounces at paraview.org] On Behalf Of Nathalie.Rauschmayr at dlr.de
> Sent: 07 January 2011 15:13
> To: paraview at paraview.org
> Subject: [Paraview] ParaView 3.8.1 and HDF5
>
> Hello,
>
>
> I've installed a HDF5 version on my system and I've tried to compile ParaView 3.8.1 with this version.
> I used the CMAKE flag "PARAVIEW_USE_SYSTEM_HDF5" therefore. I always get the following error:
>
> ParaView/Utilities/Xdmf2/libsrc/XdmfH5Driver.cxx:189: error: braces around scalar initializer for type 'herr_t (*)(H5FD_t*, unsigned char*, hbool_t)'
>
> The HDF5 version, which I use, is a modified version, which is described in this site:
> https://hpcforge.org/plugins/mediawiki/wiki/h5fddsm/index.php/Main_Page
>
> What's going wrong with the installation of ParaView?
>
>
> best regards,
>
> nathalie
>
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