[Paraview] PV 3.10.1 - compile error w.r.t. MapReduceMPI

David Partyka david.partyka at kitware.com
Fri Aug 5 10:53:39 EDT 2011 

Yeah, FindMPI has recently been re-written I would update to the latest and
give that a shot.

On Fri, Aug 5, 2011 at 10:50 AM, Paul Melis <paul.melis at sara.nl> wrote:

> Hi,
>
> I just noticed my cmake is 2.8.2, would trying the latest version help
> here?
>
> Paul
>
> On 08/05/2011 04:47 PM, Paul Melis wrote:
> > Hi David,
> >
> > On 08/05/2011 02:55 PM, David Partyka wrote:
> >> Have you turned MPI On then Off and then back On again? I've seen it get
> >> confused when this happens.
> >
> > Tried that, doesn't help, unfortunately
> >
> >> Can you try a fresh (delete your build tree)
> >> build of 3.10.1 and turn everything on at once?
> >
> > A fresh build in a clean build directory (together with the cmake line
> > below) doesn't solve the problem. Note that I'm not setting the openmpi
> > header/library locations directly, but let CMake detect them. I assume
> > that's not a problem?
> >
> > Regards,
> > Paul
> >
> >>
> >> On Fri, Aug 5, 2011 at 8:15 AM, Paul Melis <paul.melis at sara.nl
> >> <mailto:paul.melis at sara.nl>> wrote:
> >>
> >>     Hi,
> >>
> >>     I'm building PV 3.8.1 and PV 3.10.1 on exactly the same Debian 6.0
> >>     system (64-bit) system using the exact same CMAKE configuration
> lines:
> >>
> >>     #!/bin/sh
> >>     cmake \
> >>        -DCMAKE_BUILD_TYPE=Release \
> >>        -DMANTA_BUILD=$HOME/c/manta-2439-build \
> >>        -DMANTA_SOURCE=$HOME/c/manta-2439 \
> >>        -DPARAVIEW_BUILD_PLUGIN_Manta=ON \
> >>        -DPARAVIEW_ENABLE_PYTHON=ON \
> >>        -DPARAVIEW_USE_MPI=ON \
> >>        <source-dir>
> >>
> >>     The 3.8.1 build succeeds, but the 3.10.1 buid fails because mpi.h is
> not
> >>     being found:
> >>
> >>     [  4%] Built target ProcessShader
> >>     [  4%] Built target vtkMaterialLibraryConfiguredFiles
> >>     [  5%] Built target vtkproj4
> >>     [  5%] Built target lproj
> >>     [  5%] Building CXX object
> >>     VTK/Utilities/mrmpi/src/CMakeFiles/MapReduceMPI.dir/mapreduce.cpp.o
> >>
> /home/opti/c/ParaView-3.10.1/VTK/Utilities/mrmpi/src/mapreduce.cpp:14:17:
> >>     error:
> >>     mpi.h: No such file or directory
> >>     In file included from
> >>
> /home/opti/c/ParaView-3.10.1/VTK/Utilities/mrmpi/src/mapreduce.cpp:22:
> >>     /home/opti/c/ParaView-3.10.1/VTK/Utilities/mrmpi/src/mapreduce.h:38:
> >>     error: field ‘MPI_Comm’ has incomplete type
> >>     /home/opti/c/ParaView-3.10.1/VTK/Utilities/mrmpi/src/mapreduce.h:81:
> >>     error: ‘MPI_Comm’ does not name a type
> >>     /home/opti/c/ParaView-3.10.1/VTK/Utilities/mrmpi/src/mapreduce.h:93:
> >>     error: ‘MPI_Comm’ does not name a type
> >>     In file included from
> >>
> /home/opti/c/ParaView-3.10.1/VTK/Utilities/mrmpi/src/mapreduce.cpp:23:
> >>     /home/opti/c/ParaView-3.10.1/VTK/Utilities/mrmpi/src/keyvalue.h:36:
> >>     error: field ‘MPI_Comm’ has incomplete type
> >>
> >>     The relevant CMAKE MPI variables seem to be set correctly:
> >>
> >>     opti at optihd0:~/c/paraview-3101-release$ grep ^MPI_ CMakeCache.txt
> >>     MPI_COMPILER:FILEPATH=/usr/bin/mpic++
> >>     MPI_COMPILE_FLAGS:STRING=
> >>
> MPI_EXTRA_LIBRARY:STRING=/usr/lib/openmpi/lib/libmpi.so;/usr/lib/openmpi/lib/libopen-rte.so;/usr/lib/openmpi/lib/libopen-pal.so;/usr/lib/libdl.so;/usr/lib/libnsl.so;/usr/lib/libutil.so;/usr/lib/libm.so;/usr/lib/libdl.so
> >>
> MPI_INCLUDE_PATH:STRING=/usr/lib/openmpi/include;/usr/lib/openmpi/include/openmpi
> >>     MPI_LIBRARY:FILEPATH=/usr/lib/openmpi/lib/libmpi_cxx.so
> >>     MPI_LINK_FLAGS:STRING=-Wl,--export-dynamic
> >>     MPI_COMPILER-ADVANCED:INTERNAL=1
> >>     MPI_COMPILE_FLAGS-ADVANCED:INTERNAL=1
> >>     MPI_EXTRA_LIBRARY-ADVANCED:INTERNAL=0
> >>     MPI_INCLUDE_PATH-ADVANCED:INTERNAL=0
> >>     MPI_LIB:INTERNAL=MPI_LIB-NOTFOUND
> >>     MPI_LIBRARY-ADVANCED:INTERNAL=0
> >>     MPI_LINK_FLAGS-ADVANCED:INTERNAL=1
> >>     opti at optihd0:~/c/paraview-3101-release$ find /usr/lib -name mpi.h
> >>     /usr/lib/openmpi/include/mpi.h
> >>
> >>     The MPI related cache variables seem to be almost the same between
> 3.8
> >>     and 3.10, and in the differences I see nothing related to missing
> >>     include paths or something like that:
> >>
> >>     opti at optihd0:~/c/paraview-3101-release$ grep MPI_ CMakeCache.txt >
> >>     mpi310.txt
> >>     opti at optihd0:~/c/paraview-3101-release$ grep MPI_
> >>     ../paraview-381-release/CMakeCache.txt > mpi38.txt
> >>     opti at optihd0:~/c/paraview-3101-release$ diff -u mpi38.txt
> mpi310.txt
> >>     --- mpi38.txt   2011-08-05 14:13:28.781521205 +0200
> >>     +++ mpi310.txt  2011-08-05 14:13:24.305022071 +0200
> >>     @@ -1,3 +1,4 @@
> >>
> +IceTMPI_LIB_DEPENDS:STATIC=general;m;general;IceTCore;general;/usr/lib/openmpi/lib/libmpi_cxx.so;general;/usr/lib/openmpi/lib/libmpi.so;general;/usr/lib/openmpi/lib/libopen-rte.so;general;/usr/lib/openmpi/lib/libopen-pal.so;general;/usr/lib/libdl.so;general;/usr/lib/libnsl.so;general;/usr/lib/libutil.so;general;/usr/lib/libm.so;general;/usr/lib/libdl.so;
> >>      MPI_COMPILER:FILEPATH=/usr/bin/mpic++
> >>      MPI_COMPILE_FLAGS:STRING=
> >>
>  MPI_EXTRA_LIBRARY:STRING=/usr/lib/openmpi/lib/libmpi.so;/usr/lib/openmpi/lib/libopen-rte.so;/usr/lib/openmpi/lib/libopen-pal.so;/usr/lib/libdl.so;/usr/lib/libnsl.so;/usr/lib/libutil.so;/usr/lib/libm.so;/usr/lib/libdl.so
> >>     @@ -15,12 +16,8 @@
> >>      ICET_MPI_MAX_NUMPROCS-ADVANCED:INTERNAL=1
> >>      //This is set from VTK_MPI_MAX_NUMPROCS.
> >>      ICET_MPI_MAX_NUMPROCS:INTERNAL=2
> >>     -//ADVANCED property for variable: ICET_MPI_POSTFLAGS
> >>     -ICET_MPI_POSTFLAGS-ADVANCED:INTERNAL=1
> >>      //This is set from VTK_MPI_POSTFLAGS.
> >>      ICET_MPI_POSTFLAGS:INTERNAL=
> >>     -//ADVANCED property for variable: ICET_MPI_PREFLAGS
> >>     -ICET_MPI_PREFLAGS-ADVANCED:INTERNAL=1
> >>      //This is set from a combination of VTK_MPI_PREFLAGS
> >>     VTK_MPI_NUMPROC_FLAG
> >>      // VTK_MPI_MAX_NUMPROCS VTK_MPI_PREFLAGS.
> >>      ICET_MPI_PREFLAGS:INTERNAL=;-np;2;
> >>
> >>     Any clues?
> >>
> >>     Regards,
> >>     Paul
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> >>
> >
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