[Paraview] Problems with Paraview 3.6.1 on cluster (client - server mode)

myaccountmail9 myaccountmail9 myaccountmail9 at gmail.com
Wed Oct 21 03:13:38 EDT 2009


Hi again Ken,
I forgot to say that our Debian version is Lenny 64 bit (I hope this
information can help to understand the problem).

Thank you very much
Luis

2009/10/21 myaccountmail9 myaccountmail9 <myaccountmail9 at gmail.com>

> Hi Ken,
> thank you for your reply.
> No, we didn't compile OSMesa ourselves, but we installed OSMesa library on
> each node downloading the .deb packages with:
>
> apt-get install libosmesa6
> apt-get install libosmesa6-dev
>
> Have you got any other idea?
> Thank you again.
> Luis
>
>
> 2009/10/20 Moreland, Kenneth <kmorel at sandia.gov>
>
>  Could it be a problem with mismatched libraries?  I notice in the error
>> below that it occurs in /usr/lib/libGL.so.1.  This is a system library.  Did
>> you compile OSMesa yourself?  If so, then you should not be using the system
>> GL libraries; you should be using the libraries that you compiled when you
>> also generated the OSMesa library.
>>
>> -Ken
>>
>>
>>
>> On 10/20/09 1:56 AM, "myaccountmail9 myaccountmail9" <
>> myaccountmail9 at gmail.com> wrote:
>>
>> Hi,
>> we have a Linux (Debian) cluster without gpu and we have a big problem
>> using Paraview 3.6.1in client - server mode.
>> The server has been compiled with OSMesa library and following the
>> instructions reported here (in particular the section "OSMesa support"):
>>
>> http://www.itk.org/Wiki/Setting_up_a_ParaView_Server
>>
>> If we try to connect the client started with the command:
>>
>> paraview
>>
>> and the server, started with the command:
>>
>> pvserver --use-offscreen-rendering
>>
>> we must disable the checkbox "Remote rendering threshold" (but this causes
>> bad performances) in the client settings (Edit -> Settings -> Render view ->
>> Server), othervise Paraview crashes after loading a big input or performing
>> some operation such us changing "outline" to "wireframe"...
>>
>> The error always is (similar to):
>>
>> ParaView3/Servers/Common/vtkServerConnection.cxx, line 67
>> vtkServerConnection (0x3182220): Server Connection Closed!
>>
>> Executing with: 0
>> *** Process received signal ***
>> Signal: Segmentation fault (11)
>> Signal code:  (128)
>> Failing at address: (nil)
>> [ 0] /lib/libpthread.so.0 [0x7f4fc6536a80]
>> [ 1] /usr/lib/libGL.so.1(glBlendFuncSeparateEXT+0x16) [0x7f4fc7bc12e6]
>> *** End of error message ***
>> Segmentation fault
>>
>>
>> This error also occurs if we start client and server logging directly
>> (without any ssh connection) on the master node; on master node X is running
>> and we can execute the test:
>>
>> mpirun -np 4 /usr/X11R6/bin/glxgears
>>
>> So, it doen't seem a problem regarding X connection and permission...
>>
>> Moreover, executing the test:
>>
>> /ParaView/ParaView-bin$ ctest -I ,,10
>>
>> we obtain some segmentation fault, but the log file can't give any useful
>> information.
>>
>> 111/475 Testing TestGradientBackground        ***Exception: SegFault
>> 121/475 Testing TestOSConeCxx                 ***Exception: SegFault
>> 131/475 Testing TestTranslucentLUTDepthPeeling***Exception: SegFault
>> 141/475 Testing BoxWidget                     ***Exception: SegFault
>> 151/475 Testing TestParallelopipedWidget      ***Exception: SegFault
>>
>> ..
>>
>> On our local machine with gpu 100% test passed, and we haven't any problem
>> to connect client and server on that machine.
>>
>>
>> MPI version is: mpirun (Open MPI) 1.2.7rc2
>> OSMesa version is: 7.0.3-7
>>
>>
>> We searched on google, on Paraview wiki... without any succes: can you
>> help us please?
>>
>> If you need more information let us now
>>
>> Thank you very much
>>
>> Luis
>>
>>
>>
>>
>>
>>
>>
>>
>>    ****      Kenneth Moreland
>>     ***      Sandia National Laboratories
>> ***********
>> *** *** ***  email: kmorel at sandia.gov
>> **  ***  **  phone: (505) 844-8919
>>     ***      web:   http://www.cs.unm.edu/~kmorel<http://www.cs.unm.edu/%7Ekmorel>
>>
>>
>
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