[Paraview] paraview and silo + cosmo
Alin M Elena
alinm.elena at googlemail.com
Fri May 1 10:29:43 EDT 2009
Hi Berk,
Thank you very much for you answer.
It seems that cosmo, pvblot filters fail too for cvs
The cosmo should be something very simple I may have a look into it if I get
some time.
Anyhow do you have any ET for the silo, as I need the plugin working for one
of our users. (Try to move some from Visit to Paraview).
Otherwise it compiles fine.
Once installed the binary will complain about missing libs
paraview
paraview: error while loading shared libraries: libpqComponents.so: cannot
open shared object file: No such file or directory
More than sure this has to do with
-- Removed runtime path from "/usr/local/lib/paraview-3.5/libpqCore.so"
-- Installing: /usr/local/lib/paraview-3.5/libpqComponents.so
-- Removed runtime path from "/usr/local/lib/paraview-3.5/libpqComponents.so"
-- Installing: /usr/local/bin/pqClientDocFinder.txt
-- Installing: /usr/local/bin/paraview
-- Removed runtime path from "/usr/local/bin/paraview"
Why is there no uninstall target in the CMakeLists.txt of paravie?
As a side, I use qt4.5.1 Why is the prefered version for qt still 4.3?
regards,
Alin
[ 97%] Building CXX object
Plugins/CosmoFilters/CMakeFiles/CosmoFiltersSMPlugin.dir/CosmoFiltersSMPluginPluginImplementation.o
[ 97%] Building CXX object
Plugins/CosmoFilters/CMakeFiles/CosmoFiltersSMPlugin.dir/qrc_CosmoFiltersSMPlugin.o
[ 97%] Building CXX object
Plugins/CosmoFilters/CMakeFiles/CosmoFiltersSMPlugin.dir/vtkCosmoHaloCountFilter.o
[ 97%] Building CXX object
Plugins/CosmoFilters/CMakeFiles/CosmoFiltersSMPlugin.dir/vtkCosmoHaloClassFilter.o
[ 97%] Building CXX object
Plugins/CosmoFilters/CMakeFiles/CosmoFiltersSMPlugin.dir/vtkCosmoHaloFinder.o
/home/alin/ParaView3/Plugins/CosmoFilters/vtkCosmoHaloFinder.cxx: In member
function ‘void vtkCosmoHaloFinder::Reorder(long long int*, long long int*,
int)’:
/home/alin/ParaView3/Plugins/CosmoFilters/vtkCosmoHaloFinder.cxx:495: error:
‘nth_element’ is not a member of ‘std’
make[2]: ***
[Plugins/CosmoFilters/CMakeFiles/CosmoFiltersSMPlugin.dir/vtkCosmoHaloFinder.o]
Error 1
make[1]: *** [Plugins/CosmoFilters/CMakeFiles/CosmoFiltersSMPlugin.dir/all]
Error 2
make: *** [all] Error 2
[ 99%] Building CXX object Plugins/pvblot/CMakeFiles/pvblot.dir/pqBlotDialog.o
In file included from /home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx:29:
/home/alin/ParaView3CVS/Plugins/pvblot/ui_pqBlotDialog.h:24:25: error:
pqblotShell.h: No such file or directory
In file included from /home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx:29:
/home/alin/ParaView3CVS/Plugins/pvblot/ui_pqBlotDialog.h: In member function
‘void Ui_pqBlotDialog::setupUi(QDialog*)’:
/home/alin/ParaView3CVS/Plugins/pvblot/ui_pqBlotDialog.h:55: error: invalid
use of incomplete type ‘struct pqBlotShell’
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.h:27: error: forward
declaration of ‘struct pqBlotShell’
/home/alin/ParaView3CVS/Plugins/pvblot/ui_pqBlotDialog.h:56: error: invalid
use of incomplete type ‘struct pqBlotShell’
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.h:27: error: forward
declaration of ‘struct pqBlotShell’
/home/alin/ParaView3CVS/Plugins/pvblot/ui_pqBlotDialog.h:58: error: no
matching function for call to ‘QVBoxLayout::addWidget(pqBlotShell*&)’
/usr/include/QtGui/qboxlayout.h:85: note: candidates are: void
QBoxLayout::addWidget(QWidget*, int, Qt::Alignment)
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx: In constructor
‘pqBlotDialog::pqBlotDialog(QWidget*)’:
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx:50: error: no matching
function for call to ‘pqBlotDialog::connect(pqBlotShell*&, const char*,
QWidget*&, const char*)’
/usr/include/QtCore/qobject.h:202: note: candidates are: static bool
QObject::connect(const QObject*, const char*, const QObject*, const char*,
Qt::ConnectionType)
/usr/include/QtCore/qobject.h:307: note: bool
QObject::connect(const QObject*, const char*, const char*, Qt::ConnectionType)
const
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx: In member function
‘virtual pqServer* pqBlotDialog::activeServer() const’:
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx:69: error: invalid use of
incomplete type ‘struct pqBlotShell’
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.h:27: error: forward
declaration of ‘struct pqBlotShell’
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx: In member function
‘virtual void pqBlotDialog::setActiveServer(pqServer*)’:
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx:74: error: invalid use of
incomplete type ‘struct pqBlotShell’
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.h:27: error: forward
declaration of ‘struct pqBlotShell’
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx: In member function
‘virtual void pqBlotDialog::open(const QString&)’:
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx:85: error: invalid use of
incomplete type ‘struct pqBlotShell’
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.h:27: error: forward
declaration of ‘struct pqBlotShell’
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx: In static member
function ‘static pqBlotDialogExecuteAction*
pqBlotDialogExecuteAction::connect(QAction*, pqBlotShell*)’:
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx:106: error: no matching
function for call to
‘pqBlotDialogExecuteAction::pqBlotDialogExecuteAction(pqBlotShell*&, QString)’
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx:96: note: candidates are:
pqBlotDialogExecuteAction::pqBlotDialogExecuteAction(QObject*, const QString&)
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.h:67: note:
pqBlotDialogExecuteAction::pqBlotDialogExecuteAction(const
pqBlotDialogExecuteAction&)
/home/alin/ParaView3/Plugins/pvblot/pqBlotDialog.cxx:109: error: no matching
function for call to
‘pqBlotDialogExecuteAction::connect(pqBlotDialogExecuteAction*&, const char*,
pqBlotShell*&, const char*)’
/usr/include/QtCore/qobject.h:202: note: candidates are: static bool
QObject::connect(const QObject*, const char*, const QObject*, const char*,
Qt::ConnectionType)
/usr/include/QtCore/qobject.h:307: note: bool
QObject::connect(const QObject*, const char*, const char*, Qt::ConnectionType)
const
make[2]: *** [Plugins/pvblot/CMakeFiles/pvblot.dir/pqBlotDialog.o] Error 1
make[1]: *** [Plugins/pvblot/CMakeFiles/pvblot.dir/all] Error 2
make: *** [all] Error 2
Alin
--
______________________________________________________________________
"If the Universities will not study useless subjects, who will?"
G. F. FitzGerald, Nature, 45/46, 392 (1892)
______________________________________________________________________
Mr Alin M ELENA
Irish Centre for High-End Computing -- www.ichec.ie
The Design Tower, Trinity Technology & Enterprise Campus
Grand Canal Quay, Dublin 2, Ireland
Tel: +353 (0) 1 5241608 ext 29
Fax: +353 (0) 1 7645845
http://alin.elenaworld.net
alin.elena at ichec.ie
alinm.elena at gmail.com
______________________________________________________________________
On Friday 01 May 2009 14:39:46 you wrote:
> I'd recommend turning of the Silo reader. We will remove it and
> replace it with another reader in the version.
>
> -berk
>
> On Fri, May 1, 2009 at 5:04 AM, Alin M Elena <alinm.elena at googlemail.com>
wrote:
> > Hi,
> >
> >
> > I try to compile paraview CVS with silo plugin on a linux 64 bit machine
> > opensuse 11.1 with MVAPICH2-0.9.8
> > and gnu compilers.
> >
> > However I get the following error (The same error I get with the 3.4.0
> > stable
> > version, I have attached the CMakeCache.txt too)
> >
> > [ 34%] Building CXX object
> > Servers/Filters/CMakeFiles/vtkPVFilters.dir/vtkSiloReader.o
> > cd /home/alin/ParaView3CVS/Servers/Filters &&
> > /usr/lib64/mpi/gcc/mvapich2/bin/mpicxx -DvtkPVFilters_EXPORTS -
> > DVTK_PYTHON_BUILD -DMPICH_IGNORE_CXX_SEEK -Wno-deprecated -fPIC -
> > I/home/alin/ParaView3/Servers/Filters -I/home/alin/ParaView3CVS -
> > I/home/alin/ParaView3CVS/VTK/Utilities -I/home/alin/silo-4.7/include -
> > I/home/alin/ParaView3CVS/Servers/Filters
> > -I/home/alin/ParaView3/Servers/Common
> > -I/home/alin/ParaView3/Utilities/hdf5
> > -I/home/alin/ParaView3CVS/Utilities/hdf5
> > -I/home/alin/ParaView3/VTK -I/home/alin/ParaView3CVS/VTK -
> > I/home/alin/ParaView3/VTK/Utilities -I/home/alin/ParaView3/VTK/Common -
> > I/home/alin/ParaView3CVS/VTK/Common -I/home/alin/ParaView3/VTK/Filtering
> > - I/home/alin/ParaView3CVS/VTK/Filtering -
> > I/home/alin/ParaView3/VTK/GenericFiltering -
> > I/home/alin/ParaView3CVS/VTK/GenericFiltering
> > -I/home/alin/ParaView3/VTK/IO -
> > I/home/alin/ParaView3CVS/VTK/IO -I/home/alin/ParaView3/VTK/Imaging -
> > I/home/alin/ParaView3CVS/VTK/Imaging -I/home/alin/ParaView3/VTK/Rendering
> > - I/home/alin/ParaView3CVS/VTK/Rendering
> > -I/home/alin/ParaView3/VTK/Parallel -
> > I/home/alin/ParaView3CVS/VTK/Parallel -I/home/alin/ParaView3/VTK/Graphics
> > - I/home/alin/ParaView3CVS/VTK/Graphics -I/home/alin/ParaView3/VTK/Hybrid
> > - I/home/alin/ParaView3CVS/VTK/Hybrid
> > -I/home/alin/ParaView3/VTK/VolumeRendering
> > -I/home/alin/ParaView3CVS/VTK/VolumeRendering -
> > I/home/alin/ParaView3/VTK/Widgets -I/home/alin/ParaView3CVS/VTK/Widgets -
> > I/home/alin/ParaView3/VTK/Infovis -I/home/alin/ParaView3CVS/VTK/Infovis -
> > I/home/alin/ParaView3/VTK/Views -I/home/alin/ParaView3CVS/VTK/Views -
> > I/home/alin/ParaView3/Utilities/Xdmf2/vtk -
> > I/home/alin/ParaView3CVS/Utilities/Xdmf2/vtk -
> > I/usr/lib64/mpi/gcc/mvapich2/include -
> > I/home/alin/ParaView3/Utilities/IceT/src/include -
> > I/home/alin/ParaView3CVS/Utilities/IceT/src/include -
> > I/home/alin/ParaView3/Utilities/VTKClientServer -
> > I/home/alin/ParaView3CVS/Utilities/VTKClientServer -o
> > CMakeFiles/vtkPVFilters.dir/vtkSiloReader.o -c
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx: In member
> > function ‘vtkDataSet* vtkSiloReader::CreateRectilinearMesh(DBquadmesh*)’:
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:1732: error:
> > pointer of
> > type ‘void *’ used in arithmetic
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:1732: error:
> > ‘void*’ is
> > not a pointer-to-object type
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx: In member
> > function ‘vtkDataSet* vtkSiloReader::GetCurve(DBfile*, const char*)’:
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2008: error:
> > pointer of
> > type ‘void *’ used in arithmetic
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2008: error:
> > ‘void*’ is
> > not a pointer-to-object type
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2008: error:
> > pointer of
> > type ‘void *’ used in arithmetic
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2008: error:
> > ‘void*’ is
> > not a pointer-to-object type
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx: In member
> > function ‘vtkDataArray* vtkSiloReader::GetQuadVectorVar(DBquadvar*)’:
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2205: error:
> > pointer of
> > type ‘void *’ used in arithmetic
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2205: error:
> > ‘void*’ is
> > not a pointer-to-object type
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2206: error:
> > pointer of
> > type ‘void *’ used in arithmetic
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2206: error:
> > ‘void*’ is
> > not a pointer-to-object type
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2206: error:
> > pointer of
> > type ‘void *’ used in arithmetic
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2206: error:
> > ‘void*’ is
> > not a pointer-to-object type
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx: In member
> > function ‘vtkDataSet* vtkSiloReader::GetPointMesh(DBfile*, const char*)’:
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2256: error:
> > pointer of
> > type ‘void *’ used in arithmetic
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2256: error:
> > ‘void*’ is
> > not a pointer-to-object type
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx: In member
> > function ‘vtkDataArray* vtkSiloReader::GetPointVectorVar(DBmeshvar*)’:
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2306: error:
> > pointer of
> > type ‘void *’ used in arithmetic
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2306: error:
> > ‘void*’ is
> > not a pointer-to-object type
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2307: error:
> > pointer of
> > type ‘void *’ used in arithmetic
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2307: error:
> > ‘void*’ is
> > not a pointer-to-object type
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2307: error:
> > pointer of
> > type ‘void *’ used in arithmetic
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2307: error:
> > ‘void*’ is
> > not a pointer-to-object type
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx: In member
> > function ‘vtkDataArray* vtkSiloReader::GetUcdVectorVar(DBucdvar*)’:
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2482: error:
> > invalid conversion from ‘void*’ to ‘float*’
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2483: error:
> > invalid conversion from ‘void*’ to ‘float*’
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2485: error:
> > invalid conversion from ‘void*’ to ‘float*’
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx: In member
> > function ‘vtkDataSet* vtkSiloReader::GetUnstructuredMesh(DBfile*, const
> > char*)’: /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2577:
> > error: invalid conversion from ‘void*’ to ‘const float*’
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2578: error:
> > invalid conversion from ‘void*’ to ‘const float*’
> > /home/alin/ParaView3/Servers/Filters/vtkSiloReader.cxx:2581: error:
> > invalid conversion from ‘void*’ to ‘const float*’
> > make[2]: ***
> > [Servers/Filters/CMakeFiles/vtkPVFilters.dir/vtkSiloReader.o] Error 1
> > make[2]: Leaving directory `/home/alin/ParaView3CVS'
> > make[1]: *** [Servers/Filters/CMakeFiles/vtkPVFilters.dir/all] Error 2
> > make[1]: Leaving directory `/home/alin/ParaView3CVS'
> > make: *** [all] Error 2
> >
> > Alin
> >
> > --
> > ______________________________________________________________________
> > "If the Universities will not study useless subjects, who will?"
> > G. F. FitzGerald, Nature, 45/46, 392 (1892)
> > ______________________________________________________________________
> > Mr Alin M ELENA
> > Irish Centre for High-End Computing -- www.ichec.ie
> > The Design Tower, Trinity Technology & Enterprise Campus
> > Grand Canal Quay, Dublin 2, Ireland
> > Tel: +353 (0) 1 5241608 ext 29
> > Fax: +353 (0) 1 7645845
> > http://alin.elenaworld.net
> > alin.elena at ichec.ie
> > alinm.elena at gmail.com
> > ______________________________________________________________________
> >
> >
> > _______________________________________________
> > Powered by www.kitware.com
> >
> > Visit other Kitware open-source projects at
> > http://www.kitware.com/opensource/opensource.html
> >
> > Please keep messages on-topic and check the ParaView Wiki at:
> > http://paraview.org/Wiki/ParaView
> >
> > Follow this link to subscribe/unsubscribe:
> > http://www.paraview.org/mailman/listinfo/paraview
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