[Paraview] Paraview Timestep information

Biao She shebiao at gmail.com
Thu Mar 5 12:46:14 EST 2009


We are talking about multiple DICOM files (a file series).
Each DICOM file has its own DICOM tags. These tags contain the information
of the specific DICOM file. Different DICOM file may have the same tag
values (i.e. patient ID, Acquisition Time).
In my case, for simplicity, suppose all my DIOCM files have the same patient
ID, but they don't have the same Acquisition Time. There are 10 different
acquistion times in total. So, my DICOM files can divide to 10 groups and
each group of DICOM files have the same acquisition time. Also, each group
represents the same object (because they have the same patient ID).
The reader I want will enable Paraview to aware of this acquisition time
information in DICOM files and animate the DICOM files according to the
information (from group 0 to group 9).
Currently, I use the vtkDICOMImageReader to read one group of DICOM files.
This reader doesn't support reading acquisition time information. But
reading acquisition time shouldn't be very hard to implement. The things
that I am not sure is that how to relate the time information to this group
of DIOCM files (i.e. group 0), and then keep reading until all the groups
are being read?
I hope I explain my question clear using my broken english, please let me
know if not.
Thanks

Aaron

On Thu, Mar 5, 2009 at 9:48 AM, Berk Geveci <berk.geveci at kitware.com> wrote:

> I am not familiar with the structure of DICOM format. Are we talking
> about multiple DICOM files (i.e. a file series) or one file that has
> all time steps? Also, which DICOM reader are you using and can that
> reader support time?
>
> -berk
>
> On Thu, Mar 5, 2009 at 1:27 AM, Biao She <shebiao at gmail.com> wrote:
> > Hi everyone.
> > I am trying to visualize a beating heart using Paraview.
> > The files I need to read is a 4d dicom files. It contains several
> "groups"
> > of DICOM files. Each group of DICOM files has the same "Acquisition
> Time",
> > which means that this group of DICOM files represent the heart in a
> specific
> > time.
> > To make things easier to say, suppose that I have 10 groups of DICOM
> files.
> > The first group of DICOM files is the heart at time 0, the last group of
> > DICOM files is the heart at time 9. I need to read those files and
> animate
> > them from 0 to 9.
> > I know how to read one group of DICOM files into paraview. The question
> is I
> > am not sure how to read all the files into paraview with "time"
> information?
> > The time information will be used for animation by Paraview.
> > Anyone has done that before? Any comment and idea will be highly
> > appreciated.
> > Thanks very much for your time!
> >
> > Aaron
> >
> >
> >
> >
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-- 
She, Biao
Department of Computing Science,
University of Alberta, Edmonton, Canada
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