[Paraview] compile error with 3.6.1 on RHEL5

Jack Gundrum jsg3 at psu.edu
Fri Dec 18 16:27:40 EST 2009


Hi all,
I run into the following compile error with gcc (GCC) 4.4.2 and openmpi 
1.3.3 on RHEL5?



Scanning dependencies of target vtkSMExtractDocumentation
[ 86%] Building CXX object 
Servers/ServerManager/CMakeFiles/vtkSMExtractDocumentation.dir/vtkSMExtractDocumentation.o
Linking CXX executable ../../bin/vtkSMExtractDocumentation
/usr/global/paraview/3.6.1/paraview3build/bin/libvtkPVServerCommon.a(vtkPVMPICommunicator.o): 
In function `MPI::Intracomm::Intracomm()':
vtkPVMPICommunicator.cxx:(.text._ZN3MPI9IntracommC2Ev[MPI::Intracomm::Intracomm()]+0x11): 
undefined reference to `MPI::Comm::Comm()'
/usr/global/paraview/3.6.1/paraview3build/bin/libvtkPVServerCommon.a(vtkPVMPICommunicator.o): 
In function `MPI::Intracomm::Intracomm(ompi_communicator_t*)':
vtkPVMPICommunicator.cxx:(.text._ZN3MPI9IntracommC1EP19ompi_communicator_t[MPI::Intracomm::Intracomm(ompi_communicator_t*)]+0x16): 
undefined reference to `MPI::Comm::Comm()'
/usr/global/paraview/3.6.1/paraview3build/bin/libvtkPVServerCommon.a(vtkPVMPICommunicator.o): 
In function `MPI::Op::Init(void (*)(void const*, void*, int, 
MPI::Datatype const&), bool)':
vtkPVMPICommunicator.cxx:(.text._ZN3MPI2Op4InitEPFvPKvPviRKNS_8DatatypeEEb[MPI::Op::Init(void 
(*)(void const*, void*, int, MPI::Datatype const&), bool)]+0x20): 
undefined reference to `ompi_mpi_cxx_op_intercept'
/usr/global/paraview/3.6.1/paraview3build/bin/libvtkPVServerCommon.a(vtkPVMPICommunicator.o):(.rodata._ZTVN3MPI3WinE[vtable 
for MPI::Win]+0x48): undefined reference to `MPI::Win::Free()'
/usr/global/paraview/3.6.1/paraview3build/bin/libvtkPVServerCommon.a(vtkPVMPICommunicator.o):(.rodata._ZTVN3MPI8DatatypeE[vtable 
for MPI::Datatype]+0x78): undefined reference to `MPI::Datatype::Free()'
collect2: ld returned 1 exit status
make[2]: *** [bin/vtkSMExtractDocumentation] Error 1
make[1]: *** 
[Servers/ServerManager/CMakeFiles/vtkSMExtractDocumentation.dir/all] Error 2

-- 
Jack Gundrum
ITS - Research Computing & Cyberinfrastucture
Penn State University



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