[Paraview] Recent Xdmf volume rendering

Berk Geveci berk.geveci at kitware.com
Wed Dec 2 09:09:30 EST 2009


Hmm. This is not good. I am guessing this is in CVS ParaView? Do you
know when this started happening? Any suggestions on how to reproduce
it? Also, can you run in a debugger and give us stack traces?

On Wed, Dec 2, 2009 at 7:51 AM, Dominik Szczerba <dominik at itis.ethz.ch> wrote:
> However: changing ExtractSubset parameters (output extents) at some point
> (after a few changes) "propagates" upstream, i.e., the original dataset
> "inherits" the extents of the downstream filter (gets truncated). This is
> clearly wrong, but probably unrelated to this topic.
>
> BTW. For a longer while I have been observing dramatic drop in PV usability.
> Average time before crashes is only a few minutes. I am basically scared to
> touch anything once I set up my pipeline (change names of calculator
> variables, extents of VOI etc. etc.). My last resort of using save states is
> now failing too, it is usually impossible to reload the state (segmentation
> faults).
>
> Dominik
>
> Dominik Szczerba wrote:
>>
>> I checked the latest CVS (compilation errors see the other thread) and the
>> problem is gone, ExtractSubset behaves now correctly.
>>
>> Thanks
>> Dominik
>>
>>
>>
>> Utkarsh Ayachit wrote:
>>>
>>> Possibly related. Any possibility you can share a concrete
>>> example/dataset?
>>>
>>> Utkarsh
>>>
>>> On Tue, Dec 1, 2009 at 4:49 PM, Dominik Szczerba <dominik at itis.ethz.ch>
>>> wrote:
>>>>
>>>> Just on the occasion of transient 3DCoRectMesh datasets being loaded as
>>>> "Image (Uniform Rectilinear - I just noticed that "Extract Subset" goes
>>>> completely crazy - the output is wrongly sized and contains no cells...
>>>> Accidental or related?
>>>>
>>>> Dominik
>>>>
>>>>
>>>>>>>> Grid) with blanking"
>>>>
>>>> Eric E. Monson wrote:
>>>>>
>>>>> That seems to work great now, Utkarsh -- Thanks for the fast fix!
>>>>>
>>>>> Can someone please explain what the "with blanking" is, though -- Is it
>>>>> a
>>>>> way to mask out certain blocks, or something? Is this something that is
>>>>> supported within Xdmf? Not a huge issue, but I was just curious...
>>>>>
>>>>> Thanks again,
>>>>> -Eric
>>>>>
>>>>>
>>>>> On Nov 26, 2009, at 12:31 PM, Utkarsh Ayachit wrote:
>>>>>
>>>>>> There was another bug in the code that was incorrectly publishing
>>>>>> origin of the dataset as spacing which could have been messing up the
>>>>>> volume rendering. I've committed a fix. Feel free to give it a try
>>>>>> now.
>>>>>>
>>>>>> Utkarsh
>>>>>>
>>>>>> On Thu, Nov 26, 2009 at 12:07 PM, Utkarsh Ayachit
>>>>>> <utkarsh.ayachit at kitware.com> wrote:
>>>>>>>
>>>>>>> To keep the behavior consistent with the previous reader, I've
>>>>>>> changed
>>>>>>> the vtkXdmfReader2 to produce vtkImageData for 2D/3DCoRectMesh.
>>>>>>>
>>>>>>> Utkarsh
>>>>>>>
>>>>>>> On Wed, Nov 25, 2009 at 4:33 PM, Eric E. Monson <emonson at cs.duke.edu>
>>>>>>> wrote:
>>>>>>>>
>>>>>>>> Hey all,
>>>>>>>>
>>>>>>>> I just noticed today that I can't volume render my Xdmf ImageData
>>>>>>>> sets
>>>>>>>> in
>>>>>>>> CVS ParaView (today's -- OS X 10.5.8, serial build, Qt 4.5.2 cocoa,
>>>>>>>> cmake
>>>>>>>> 2.9.20091003).
>>>>>>>>
>>>>>>>> With the binary PV 3.6.1 I can load in a temporal collection or
>>>>>>>> single
>>>>>>>> 3DCoRectMesh and it  volume renders fine. With current 3.7 (now
>>>>>>>> using
>>>>>>>> vtkXdmfReader2, I assume), this data shows up as "Image (Uniform
>>>>>>>> Rectilinear
>>>>>>>> Grid) with blanking" and I can choose volume rendering but nothing
>>>>>>>> shows up
>>>>>>>> in the render window.
>>>>>>>>
>>>>>>>> Volume rendering of a Wavelet Source works just fine, so I'm
>>>>>>>> wondering
>>>>>>>> what
>>>>>>>> the "with blanking" part is, and if that's what's causing my
>>>>>>>> trouble?
>>>>>>>>
>>>>>>>> Thanks,
>>>>>>>> -Eric
>>>>>>>>
>>>>>>>> ------------------------------------------------------
>>>>>>>> Eric E Monson
>>>>>>>> Duke Visualization Technology Group
>>>>>>>>
>>>>>>>>
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>
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