[Paraview] [PV3_CVS] Problem when loading parallel data (SOS and XDMF)

Renato N. Elias rnelias at nacad.ufrj.br
Wed Jul 30 10:41:59 EDT 2008


So, I suppose it's not possible to load parallel xdmf files in PV yet  :o(

Renato.

Jerry Clarke wrote:
> I think what is happening is that the Xinclude/XPointer interfaces are 
> more particular. Technically, if the
> XML specifies a DTD it should be there, but it had been ignored in the
> past. So I guess we're all doing it wrong, technically.
>
> Jerry
>
> Renato N. Elias wrote:
>>
>> Ok, I commented all <!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []> clauses and 
>> now PV does not complain about DTD anymore but nothing is loaded :o(
>>
>> Am I doing something wrong? I can load the domain pieces individually 
>> which make me believe that the XDMF files are correct.
>>
>> Renato.
>>
>>
>> Jerry Clarke wrote:
>>> Renato,
>>>
>>> I think I've seen this before. The XML parser is trying to validate
>>> the XML.
>>>
>>> As a test, try removing "<!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []>" from the
>>> xml file or creating an empty Xdmf.dtd (I'll dig up the actual DTD).
>>>
>>> Jerry
>>>
>>>
>>> Renato N. Elias wrote:
>>>>
>>>> Oops, my mistake Berk. It's not the first time I mismatch 
>>>> versions... (it's easy to get confused when you have 6 different PV 
>>>> versions installed).
>>>>
>>>> Ok, now I can load SOS but it seems that time support is not 
>>>> available yet (besides some important parallel filters such as 
>>>> "clean to grid"). Is it correct?!
>>>>
>>>> For the XDMF file I've had no success. I've tried to load the 
>>>> following file:
>>>>
>>>> <?xml version="1.0" ?>
>>>> <!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []>
>>>> <Xdmf xmlns:xi="http://www.w3.org/2001/XInclude" Version="2.0">
>>>>   <Domain>
>>>>      <Grid GridType="Collection" CollectionType="Spatial">
>>>>         <xi:include href="cav_4_000.xmf" 
>>>> xpointer="xpointer(//Xdmf/Domain/Grid)" />
>>>>         <xi:include href="cav_4_001.xmf" 
>>>> xpointer="xpointer(//Xdmf/Domain/Grid)" />
>>>>         <xi:include href="cav_4_002.xmf" 
>>>> xpointer="xpointer(//Xdmf/Domain/Grid)" />
>>>>         <xi:include href="cav_4_003.xmf" 
>>>> xpointer="xpointer(//Xdmf/Domain/Grid)" />
>>>>      </Grid>
>>>>   </Domain>
>>>> </Xdmf>
>>>>
>>>> Started PV client and launched PV server with the command (mpiexec 
>>>> -n 4 pvserver -rc -ch=localhost) and got the following error:
>>>>
>>>> file:///C%3A/users/Renato/svn/EdgeCFD-HEAD/bin/cav31/P2P/cav_4_000.xmf:2: 
>>>> I/O wa
>>>> rning : failed to load external entity 
>>>> "file:///C%3A/users/Renato/svn/EdgeCFD-HEAD/bin/cav31/P2P/Xdmf.dtd"
>>>> <!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []>
>>>>                                    ^
>>>> file:///C%3A/users/Renato/svn/EdgeCFD-HEAD/bin/cav31/P2P/cav_4_001.xmf:2: 
>>>> I/O wa
>>>> rning : failed to load external entity 
>>>> "file:///C%3A/users/Renato/svn/EdgeCFD-HEAD/bin/cav31/P2P/Xdmf.dtd"
>>>> <!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []>
>>>>                                    ^
>>>> file:///C%3A/users/Renato/svn/EdgeCFD-HEAD/bin/cav31/P2P/cav_4_002.xmf:2: 
>>>> I/O wa
>>>> rning : failed to load external entity 
>>>> "file:///C%3A/users/Renato/svn/EdgeCFD-HEAD/bin/cav31/P2P/Xdmf.dtd"
>>>> <!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []>
>>>>                                    ^
>>>> file:///C%3A/users/Renato/svn/EdgeCFD-HEAD/bin/cav31/P2P/cav_4_003.xmf:2: 
>>>> I/O wa
>>>> rning : failed to load external entity 
>>>> "file:///C%3A/users/Renato/svn/EdgeCFD-HEAD/bin/cav31/P2P/Xdmf.dtd"
>>>> <!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []>
>>>>                                    ^
>>>> file:///C%3A/users/Renato/svn/EdgeCFD-HEAD/bin/cav31/P2P/cav_4_000.xmf:2: 
>>>> I/O wa
>>>> rning : failed to load external entity 
>>>> "file:///C%3A/users/Renato/svn/EdgeCFD-HEAD/bin/cav31/P2P/Xdmf.dtd"
>>>> <!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []>
>>>>
>>>> ...
>>>>
>>>> I also tried substituting the "xi:include..." statements by the 
>>>> corresponding XML extended portions. The model was not loaded, but 
>>>> the error message disappeared ;o)
>>>>
>>>> Regards
>>>>
>>>> Renato.
>>>>
>>>>
>>>> Berk Geveci wrote:
>>>>> I am pretty sure this is due to client/server version 
>>>>> incompatibility.
>>>>>
>>>>> -berk
>>>>>
>>>>> On Tue, Jul 29, 2008 at 3:42 PM, Renato N. Elias 
>>>>> <rnelias at nacad.ufrj.br> wrote:
>>>>>  
>>>>>> I'm trying to load XDMF and Ensight SOS parallel data in PV3 
>>>>>> (CVS's HEAD)
>>>>>> which is returning me the following error message:
>>>>>>
>>>>>> ERROR: In
>>>>>> C:\berk\ReleaseBuilds\ParaView3\Servers\Common\vtkPVDataInformation.cxx, 
>>>>>>
>>>>>> line 991
>>>>>> vtkPVDataInformation (062A6ED8): Error parsing bounds.
>>>>>> (...It's funny read error messages pointing to Berk's paths :oD  )
>>>>>>
>>>>>> The same problem occur with SOS and XDMF as well. Any hint?
>>>>>>
>>>>>> Regards
>>>>>>
>>>>>> Renato.
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
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>>>>>>
>>>>>>     
>>>>>
>>>>>   
>>>>
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>>>
>>
>



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