[Paraview-developers] superbuild again on intel compilers on Linux cluster

[Scott, W Alan]

I am also trying to do Intel superbuilds on a Linux, Intel compiler, as we will have to do for Trinity.  We are failing trying to find libatomic - a gnu library!  That shouldn't happen, I would figure.  Anyway, here is where I ended up:

cMakeVars = -DCMAKE_INSTALL_PREFIX:PATH=/projects/viz/paraview/ParaView/5.1.1-sbi-mesa/Linux-chama-x86_64 -DBUILD_TESTING:BOOL=OFF -DCMAKE_BUILD_TYPE:STRING=Release -DParaView_FROM_GIT:BOOL=OFF -DParaView_FROM_SOURCE_DIR:BOOL=ON -DPARAVIEW_SOURCE_DIR:PATH=/projects/viz/paraview/src/ParaView/5.1.1-sbi/ParaView5 -DPARAVIEW_ALWAYS_SECURE_CONNECTION:BOOL=ON -DENABLE_paraview:BOOL=ON -DENABLE_ffmpeg:BOOL=ON -DENABLE_python:BOOL=ON -DENABLE_numpy:BOOL=ON -DENABLE_png:BOOL=ON -DENABLE_osmesa:BOOL=ON -DENABLE_cgns:BOOL=ON -DENABLE_silo:BOOL=ON -DENABLE_visitbridge:BOOL=ON -DMPI_COMPILER:FILEPATH=/opt/openmpi-1.8-intel//bin/mpicxx -DPARAVIEW_ALWAYS_SECURE_CONNECTION:BOOL=ON -DENABLE_mpi:BOOL=ON -DPARAVIEW_USE_MPI:BOOL=ON -DMPI_INCLUDE_PATH:PATH=/opt/openmpi-1.8-intel//include/

-- Using git-describe to determine ParaView version
-- Could not use git to determine source version, using version
-- Using ParaView Version: 5.1.0 (5|1|0|)
-- Using system EGL. Pick correct python based on your deployment target
-- Enabling zlib since needed by: boost;cgns;ffmpeg;hdf5;png;python;silo
-- Enabling szip since needed by: hdf5
-- Enabling hdf5 since needed by: cgns;silo
-- Enabling cgns as requested.
-- Enabling ffmpeg as requested.
-- Enabling mpi as requested.
-- Enabling bzip2 since needed by: python
-- Enabling png as requested.
-- Enabling python as requested.
-- Enabling numpy as requested.
-- Enabling llvm since needed by: osmesa
-- Enabling osmesa as requested.
-- Enabling boost since needed by: visitbridge
-- Enabling silo as requested.
-- Enabling visitbridge as requested.
-- Enabling paraview as requested.
-- PROJECTS_ENABLED zlib;szip;hdf5;cgns;ffmpeg;mpi;bzip2;png;python;numpy;llvm;osmesa;boost;silo;visitbridge;paraview
-- Configuring done
-- Generating done
-- Build files have been written to: /projects/viz/paraview/ParaView/5.1.1-sbi-mesa/Linux-chama-x86_64/Build
[  7%] Built target zlib
[ 14%] Built target szip
[ 20%] Built target hdf5
[ 27%] Built target cgns
[ 33%] Built target boost
[ 39%] Built target ffmpeg
[ 45%] Built target silo
[ 51%] Built target visitbridge
[ 57%] Built target png
[ 63%] Built target bzip2
[ 70%] Built target python
[ 76%] Built target mpi
[ 82%] Built target numpy
[ 83%] Performing configure step for 'llvm'
CMake Error at cmake/modules/CheckAtomic.cmake:36 (message):
  Host compiler appears to require libatomic, but cannot find it.
Call Stack (most recent call first):
  cmake/config-ix.cmake:296 (include)
  CMakeLists.txt:407 (include)


-- Configuring incomplete, errors occurred!
See also "/projects/viz/paraview/ParaView/5.1.1-sbi-mesa/Linux-chama-x86_64/Build/llvm/src/llvm-build/CMakeFiles/CMakeOutput.log".
See also "/projects/viz/paraview/ParaView/5.1.1-sbi-mesa/Linux-chama-x86_64/Build/llvm/src/llvm-build/CMakeFiles/CMakeError.log".
make[2]: *** [llvm/src/llvm-stamp/llvm-configure] Error 1
make[1]: *** [CMakeFiles/llvm.dir/all] Error 2


Thanks for any help,

Alan

--------------------------------------------------------
W. Alan Scott
ParaView Support Manager

SAIC
Sandia National Laboratories, MS 0822
Org 9326 - Building 880 A1-K
(505) 284-0932   FAX (505) 284-5619
---------------------------------------------------------

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