[Paraview-developers] [EXTERNAL] Re: Master is broken (trying to build and link Fortran)
Scott, W Alan
wascott at sandia.gov
Fri Apr 5 16:41:37 EDT 2013
Andy,
That worked! Master now builds and runs correctly. This includes the fortran issues as well as the kwProcessXML issue.
Thanks to you and the team.
Alan
From: Andy Bauer [mailto:andy.bauer at kitware.com]
Sent: Friday, April 05, 2013 10:48 AM
To: Scott, W Alan
Cc: paraview-developers at paraview.org
Subject: Re: [EXTERNAL] Re: [Paraview-developers] Master is broken (trying to build and link Fortran)
Hi Alan,
FYI: This is now fixed in master.
Andy
On Thu, Apr 4, 2013 at 2:04 PM, Andy Bauer <andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>> wrote:
You should be able to do:
git fetch --prune
# the next command should show whether or not you have the git remotes set up properly
git branch -a |grep 13997_disable_phasta_adaptor
git checkout -b disable_phasta_adaptor stage/13997_disable_phasta_adaptor
If everything went right, if you do "git log" you'll see at the top:
commit 639a0bd639a63f9b6ec92e60dc6aca6cc9be9ea6
Merge: 3e5396a 22ca08d
Author: Andrew Bauer <andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>>
Date: Thu Apr 4 06:36:51 2013 -0400
Merge topic 'disable_phasta_adaptor' into 13997_disable_phasta_adaptor
Conflicts:
CoProcessing/Adaptors/BuildAdaptors.cmake
Change-Id: I9f0280754c45c3191206e20907efef3576cd9fe9
If none of this works or you've tried all the git-fu you can deal with for the day you can just put the attached file in <pv source dir>/CoProcessing/Adaptors/
Andy
On Thu, Apr 4, 2013 at 1:43 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov>> wrote:
Andy,
My git-fu is weak. How do I make a code pull from say a week ago (i.e., pre Utkarsh's last checkin :) )
Alan
From: Andy Bauer [mailto:andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>]
Sent: Thursday, April 04, 2013 11:25 AM
To: Scott, W Alan
Cc: paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>
Subject: Re: [EXTERNAL] Re: [Paraview-developers] Master is broken (trying to build and link Fortran)
Hi Alan,
You can fetch the branch at stage/13997_disable_phasta_adaptor if you want to. Otherwise, the difference is:
diff --git a/CoProcessing/Adaptors/BuildAdaptors.cmake b/CoProcessing/Adaptors/BuildAdaptors.cmake
index 2f5a8fb..6f2aa97 100644
--- a/CoProcessing/Adaptors/BuildAdaptors.cmake
+++ b/CoProcessing/Adaptors/BuildAdaptors.cmake
@@ -86,18 +86,12 @@ if (PARAVIEW_USE_MPI)
endif()
#------------------------------------------------------------------------------
-# Adaptors that need Fortran -- we disable them by default because not all
-# systems load all of the proper Fortran dependencies like MPI_Fortran_LIBRARIES
+# Adaptors that need Fortran
#------------------------------------------------------------------------------
if (CMAKE_Fortran_COMPILER_WORKS)
- cmake_dependent_option(BUILD_PHASTA_ADAPTOR
- "Build the Phasta Catalyst Adaptor" OFF
- "PARAVIEW_BUILD_CATALYST_ADAPTORS" OFF)
- if(BUILD_PHASTA_ADAPTOR)
- build_adaptor(PhastaAdaptor
- COMMENT "Building Phasta Adaptor"
- DEPENDS vtkPVCatalyst)
- endif()
+ build_adaptor(PhastaAdaptor
+ COMMENT "Building Phasta Adaptor"
+ DEPENDS vtkPVCatalyst)
endif()
Andy
On Thu, Apr 4, 2013 at 11:50 AM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov><mailto:wascott at sandia.gov<mailto:wascott at sandia.gov>>> wrote:
Thanks Andy!
Mind e-mailing me a patch?
Alan
From: Andy Bauer [mailto:andy.bauer at kitware.com<mailto:andy.bauer at kitware.com><mailto:andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>>]
Sent: Thursday, April 04, 2013 9:01 AM
To: Scott, W Alan
Cc: paraview-developers at paraview.org<mailto:paraview-developers at paraview.org><mailto:paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>
Subject: Re: [EXTERNAL] Re: [Paraview-developers] Master is broken (trying to build and link Fortran)
Hi Alan,
I have a fix for this in review. It should make it through the gatekeeper review tomorrow. Thanks for the information.
Andy
On Wed, Apr 3, 2013 at 12:31 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov><mailto:wascott at sandia.gov<mailto:wascott at sandia.gov>><mailto:wascott at sandia.gov<mailto:wascott at sandia.gov><mailto:wascott at sandia.gov<mailto:wascott at sandia.gov>>>> wrote:
You are correct with regards to the complaint about MPI fortran libraries. However, it kills my build - thus is more than just an annoyance.
Alan
From: Andy Bauer [mailto:andy.bauer at kitware.com<mailto:andy.bauer at kitware.com><mailto:andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>><mailto:andy.bauer at kitware.com<mailto:andy.bauer at kitware.com><mailto:andy.bauer at kitware.com<mailto:andy.bauer at kitware.com>>>]
Sent: Tuesday, April 02, 2013 8:32 PM
To: Scott, W Alan
Cc: paraview-developers at paraview.org<mailto:paraview-developers at paraview.org><mailto:paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>><mailto:paraview-developers at paraview.org<mailto:paraview-developers at paraview.org><mailto:paraview-developers at paraview.org<mailto:paraview-developers at paraview.org>>>
Subject: [EXTERNAL] Re: [Paraview-developers] Master is broken (trying to build and link Fortran)
Hi Alan,
Thanks for the report. Technically it's complaining about not finding the MPI fortran libraries. Either way it's an annoyance that the user shouldn't have to worry about. I'll take care of it.
Thanks,
Andy
On Tue, Apr 2, 2013 at 6:05 PM, Scott, W Alan <wascott at sandia.gov<mailto:wascott at sandia.gov><mailto:wascott at sandia.gov<mailto:wascott at sandia.gov>><mailto:wascott at sandia.gov<mailto:wascott at sandia.gov><mailto:wascott at sandia.gov<mailto:wascott at sandia.gov>>><mailto:wascott at sandia.gov<mailto:wascott at sandia.gov><mailto:wascott at sandia.gov<mailto:wascott at sandia.gov>><mailto:wascott at sandia.gov<mailto:wascott at sandia.gov><mailto:wascott at sandia.gov<mailto:wascott at sandia.gov>>>>> wrote:
Master appears to be broken for an MPI cluster build of ParaView. When I do a fresh pull of Master, we are trying to compile and link against Fortran. I am seeing the following:
-- The C compiler identification is GNU 4.1.2
-- The CXX compiler identification is GNU 4.1.2
-- Could not use git to determine source version, using version 3.98.1
-- The Fortran compiler identification is Intel
-- Checking whether /..../bin/intel64/ifort supports Fortran 90
-- Checking whether /..../bin/intel64/ifort supports Fortran 90 -- yes
..........
-- Checking for C type size macros
-- Checking for C type size macros - compiled
-- Could NOT find OpenGL (missing: OPENGL_gl_LIBRARY)
-- Could NOT find OpenGL (missing: OPENGL_gl_LIBRARY)
VTK will be built with OSMesa support!
CMake Warning at VTK/CMake/FindMPI.cmake:383 (message):
Unable to find MPI library imf
Call Stack (most recent call first):
VTK/CMake/FindMPI.cmake:569 (interrogate_mpi_compiler)
Utilities/VisItBridge/Library/VisItLib/CMake/VisItCommon.cmake:479 (include)
Utilities/VisItBridge/Library/VisItLib/CMakeLists.txt:11 (include)
-- Could NOT find MPI_Fortran (missing: MPI_Fortran_LIBRARIES)
-- Could NOT find OpenGL (missing: OPENGL_gl_LIBRARY)
CMake Warning at VTK/CMake/FindMPI.cmake:383 (message):
Unable to find MPI library imf
Call Stack (most recent call first):
VTK/CMake/FindMPI.cmake:569 (interrogate_mpi_compiler)
VTK/ThirdParty/Cosmo/CMakeLists.txt:16 (find_package)
-- Could NOT find MPI_Fortran (missing: MPI_Fortran_LIBRARIES)
CMake Warning at VTK/CMake/FindMPI.cmake:383 (message):
Unable to find MPI library imf
Call Stack (most recent call first):
VTK/CMake/FindMPI.cmake:569 (interrogate_mpi_compiler)
VTK/Parallel/MPI/CMakeLists.txt:1 (find_package)
-- Could NOT find MPI_Fortran (missing: MPI_Fortran_LIBRARIES)
CMake Warning at VTK/CMake/FindMPI.cmake:383 (message):
Unable to find MPI library imf
Call Stack (most recent call first):
VTK/CMake/FindMPI.cmake:569 (interrogate_mpi_compiler)
VTK/IO/MPIImage/CMakeLists.txt:1 (find_package)
-- Could NOT find MPI_Fortran (missing: MPI_Fortran_LIBRARIES)
CMake Warning at VTK/CMake/FindMPI.cmake:383 (message):
Unable to find MPI library imf
Call Stack (most recent call first):
VTK/CMake/FindMPI.cmake:569 (interrogate_mpi_compiler)
VTK/IO/ParallelNetCDF/CMakeLists.txt:1 (find_package)
-- Could NOT find MPI_Fortran (missing: MPI_Fortran_LIBRARIES)
CMake Warning at VTK/CMake/FindMPI.cmake:383 (message):
Unable to find MPI library imf
Call Stack (most recent call first):
VTK/CMake/FindMPI.cmake:569 (interrogate_mpi_compiler)
VTK/ThirdParty/VPIC/CMakeLists.txt:28 (find_package)
-- Could NOT find MPI_Fortran (missing: MPI_Fortran_LIBRARIES)
CMake Warning at VTK/CMake/FindMPI.cmake:383 (message):
Unable to find MPI library imf
Call Stack (most recent call first):
VTK/CMake/FindMPI.cmake:569 (interrogate_mpi_compiler)
VTK/IO/VPIC/CMakeLists.txt:2 (find_package)
However, when I open ./CMakeLists.txt, line 301, and change the definition of PARAVIEW_ENABLE_CATALYST from ON to OFF, all builds well. So, the gross error is the following line:
option(PARAVIEW_ENABLE_CATALYST "Enable Catalyst CoProcessing modules" ON)
CMakeCache.txt available upon request.
Thanks for looking at this,
Alan
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