[Kwiver-users] Recommended version of CMAKE to be used for DIVA installation

Aaron Bray aaron.bray at kitware.com
Wed Jan 17 04:13:57 EST 2018 

We are landing a few branches to get a cohesive superbuild, I will keep you
posted when everything gets in and in sync

On Wed, Jan 17, 2018 at 12:18 AM, Ankit Parag Shah <aps1 at andrew.cmu.edu>
wrote:

> Hi all,
>
> Please provide further inputs with above error.
> I have tried a few things and making changes as per open pull requests to
> the compilation code which doesn't seem to work.
> Eagerly waiting for your response.
>
> Kind Regards,
> Ankit Shah
> Masters Student in Language Technologies
> Carnegie Mellon University.
>
> On Mon, Jan 15, 2018 at 5:28 PM, Ankit Parag Shah <aps1 at andrew.cmu.edu>
> wrote:
>
>> Hi Aaron,
>>
>> Thank you for your response.
>>
>> There is a pull request open to fix linking issues on KWANT on windows -
>> https://github.com/Kitware/kwant/pull/9/commits/a3766b22772c6f39717b23b34c7e7d194cd77f1e
>> - Fix linking issues in windows
>> <https://github.com/Kitware/kwant/pull/9/commits/a3766b22772c6f39717b23b34c7e7d194cd77f1e>
>> I am able to see that the current version of kwant being compiled on is
>> same as error prone linking version of above pull request. Further, it is
>> stuck in kwant-patch step within build.make 108 line which might get fixed
>> with the pull request.
>>
>>
>> Kind Regards,
>> Ankit Shah
>> Masters Student in Language Technologies
>> Carnegie Mellon University.
>>
>> On Mon, Jan 15, 2018 at 5:13 PM, Aaron Bray <aaron.bray at kitware.com>
>> wrote:
>>
>>> Thanks for the input Ankit!
>>>
>>> I will check it all out and get back to you!
>>>
>>> On Jan 15, 2018 1:52 PM, "Ankit Parag Shah" <aps1 at andrew.cmu.edu> wrote:
>>>
>>>> Hi all,
>>>>
>>>> @Aaron - many thanks for providing the detailed list of steps.
>>>>
>>>> I am trying to follow these exact same steps from a new clean directory
>>>> - With a prebuilt KWIVER path
>>>>
>>>> clean/DIVA/build/release# cmake ../../src -DCMAKE_BUILD_TYPE=Release
>>>> -Dkwiver_DIR:PATH=../../../../kwiver/build/release/
>>>> -- Looking for your kwiver...
>>>> -- I found your kwiver!
>>>> -- It uses this fletch /home/ankit/KWIVER-Software-Sc
>>>> ripts/fletch/build/rel
>>>> -- You provided a fletch_DIR and a kwiver_DIR, I am going to ignore
>>>> this fletch_DIR and use the fletch_DIR used to build kwiver
>>>> -- I am pulling and building kwant!
>>>> -- Configuring done
>>>> -- Generating done
>>>> -- Build files have been written to: /home/ankit/KWIVER-Software-Sc
>>>> ripts/clean/DIVA/build/release
>>>>
>>>> The above command is successfully completed.
>>>>
>>>> However, compilation fails as follows -
>>>>
>>>> -- Configuring incomplete, errors occurred!
>>>> See also "/home/ankit/KWIVER-Software-Scripts/clean/DIVA/build/releas
>>>> e/kwant-build/CMakeFiles/CMakeOutput.log".
>>>> CMakeFiles/kwant.dir/build.make:106: recipe for target
>>>> 'DIVA-ExternalProject-Stamps/kwant-configure' failed
>>>> make[2]: *** [DIVA-ExternalProject-Stamps/kwant-configure] Error 1
>>>> CMakeFiles/Makefile2:104: recipe for target 'CMakeFiles/kwant.dir/all'
>>>> failed
>>>> make[1]: *** [CMakeFiles/kwant.dir/all] Error 2
>>>> Makefile:83: recipe for target 'all' failed
>>>> make: *** [all] Error 2
>>>>
>>>> These tests are performed post confirmation of the switches required
>>>> for installation in KWIVER build release.
>>>>
>>>> ============
>>>>
>>>> To check on a clean docker image with no software installed prior using
>>>> DIVA directly to compile all the relevant dependencies such as kwiver,
>>>> fletch etc, I ran the following commands.
>>>>
>>>> apt-get update
>>>> yes | apt install wget
>>>> yes | apt install python
>>>> yes | apt install vim
>>>> yes | apt install git
>>>> yes | apt install cmake
>>>> yes | apt install build-essential
>>>> mkdir DIVA
>>>> cd DIVA
>>>> mkdir -p build/release
>>>> mkdir -p build/debug
>>>> git clone https://github.com/Kitware/DIVA src
>>>>
>>>> Then ran the following command from DIVA/build/release path
>>>>
>>>> cmake ../../src -DCMAKE_BUILD_TYPE=Release
>>>>
>>>> Output - As expected clean
>>>> -- The C compiler identification is GNU 5.4.0
>>>> -- The CXX compiler identification is GNU 5.4.0
>>>> -- Check for working C compiler: /usr/bin/cc
>>>> -- Check for working C compiler: /usr/bin/cc -- works
>>>> -- Detecting C compiler ABI info
>>>> -- Detecting C compiler ABI info - done
>>>> -- Detecting C compile features
>>>> -- Detecting C compile features - done
>>>> -- Check for working CXX compiler: /usr/bin/c++
>>>> -- Check for working CXX compiler: /usr/bin/c++ -- works
>>>> -- Detecting CXX compiler ABI info
>>>> -- Detecting CXX compiler ABI info - done
>>>> -- Detecting CXX compile features
>>>> -- Detecting CXX compile features - done
>>>> -- Found Git: /usr/bin/git (found version "2.7.4")
>>>> -- I am pulling and building fletch!
>>>> -- I am pulling and building kwiver!
>>>> -- I am pulling and building kwant!
>>>> -- Configuring done
>>>> -- Generating done
>>>> -- Build files have been written to: /mnt/sdd/aps/DIVA/build/release
>>>>
>>>> However make -j16 command fails
>>>>
>>>> -- Configuring incomplete, errors occurred!
>>>> See also "/mnt/sdd/aps/DIVA/build/release/kwant-build/CMakeFiles/CMak
>>>> eOutput.log".
>>>> CMakeFiles/kwant.dir/build.make:108: recipe for target
>>>> 'DIVA-ExternalProject-Stamps/kwant-configure' failed
>>>> make[2]: *** [DIVA-ExternalProject-Stamps/kwant-configure] Error 1
>>>> CMakeFiles/Makefile2:181: recipe for target 'CMakeFiles/kwant.dir/all'
>>>> failed
>>>> make[1]: *** [CMakeFiles/kwant.dir/all] Error 2
>>>> Makefile:83: recipe for target 'all' failed
>>>> make: *** [all] Error 2
>>>>
>>>> This error is same as the error with preinstalled KWIVER and a fresh
>>>> install of DIVA repository.
>>>>
>>>> Version of kwant checked out is -
>>>>
>>>> Cloning into 'kwant'...
>>>> Note: checking out 'f53aaaafbd06d7a2c7cbedebfdce94e9dbd83347'.
>>>>
>>>> Info obtained from the CMakeOutput.log file.
>>>>
>>>> All the above steps run for compiling DIVA are located as part bash
>>>> script in a private repository - https://github.com/ankitshah00
>>>> 9/KWIVER-Software-Scripts which if deemed useful, I could make it
>>>> public post permission from my advisor.
>>>> Kindly let me know how to fix the above issue.
>>>>
>>>> Looking forward to your response.
>>>>
>>>> Kind Regards,
>>>> Ankit Shah
>>>> Masters Student in Language Technologies
>>>> Carnegie Mellon University.
>>>>
>>>> On Sat, Jan 13, 2018 at 9:07 AM, Aaron Bray <aaron.bray at kitware.com>
>>>> wrote:
>>>>
>>>>> CMake version 3.5.1 will work just fine
>>>>>
>>>>> If you are running that cmake command from your intended DIVA build
>>>>> directory (Which should be empty, do not manually build fletch and kwiver
>>>>> to the same target build directory),
>>>>> This will execute the 'Superbuild' control flow in the DIVA CMake
>>>>> files.
>>>>> (A CMake super-build is a project which downloads, configures and
>>>>> builds other projects. )
>>>>>
>>>>> This control flow from your command should return something like this :
>>>>>
>>>>> *The C compiler identification is GNU 5.4.0*
>>>>>
>>>>> *The CXX compiler identification is GNU 5.4.0*
>>>>>
>>>>> *Check for working C compiler: /usr/bin/cc*
>>>>>
>>>>> *Check for working C compiler: /usr/bin/cc -- works*
>>>>>
>>>>> *Detecting C compiler ABI info*
>>>>>
>>>>> *Detecting C compiler ABI info - done*
>>>>>
>>>>> *Detecting C compile features*
>>>>>
>>>>> *Detecting C compile features - done*
>>>>>
>>>>> *Check for working CXX compiler: /usr/bin/c++*
>>>>>
>>>>> *Check for working CXX compiler: /usr/bin/c++ -- works*
>>>>>
>>>>> *Detecting CXX compiler ABI info*
>>>>>
>>>>> *Detecting CXX compiler ABI info - done*
>>>>>
>>>>> *Detecting CXX compile features*
>>>>>
>>>>> *Detecting CXX compile features - done*
>>>>>
>>>>> *Found Git: /usr/bin/git (found version "2.7.4") *
>>>>>
>>>>> *I am pulling and building fletch!*
>>>>>
>>>>> *I am pulling and building kwiver!*
>>>>>
>>>>> *Configuring done*
>>>>>
>>>>> This is telling you that it will create a Makefile that will download
>>>>> the fletch, kwiver, and kwant source code and build them each, and then
>>>>> build the DIVA code base
>>>>>
>>>>> The Eigen Error mentioned is usually due to running CMake on KWIVER
>>>>> source (from with the KWIVER build directory) (Which should be empty and a
>>>>> different folder or a subfolder from the DIVA build directory) and not
>>>>> providing a fletch_DIR for the KWIVER CMake script to use during it's
>>>>> configuration process
>>>>>
>>>>> Did you successfully build Fletch and KWIVER manually?
>>>>>
>>>>> If so, you should run CMake for DIVA, from an empty build directory
>>>>> like so, to inform the DIVA super build of the location of your  KWIVER
>>>>> build directory
>>>>>
>>>>> $ cmake ../../src -DCMAKE_BUILD_TYPE=Release -Dkwiver_DIR:PATH=<path/to/kwiver/build/dir>
>>>>>
>>>>> CMake will return something like this:
>>>>>
>>>>>
>>>>> *Looking for your kwiver...*
>>>>>
>>>>> *I found your kwiver!*
>>>>> *It uses this fletch <path to the fletch build directory>*
>>>>>
>>>>> *I am pulling and building kwant!*
>>>>>
>>>>> *Configuring done*
>>>>>
>>>>>
>>>>>
>>>>> I suggest using the cmake gui to help see what directories and CMake
>>>>> options are set to help get your build set up
>>>>>
>>>>> (I recommend checking the 'Grouped' and 'Advanced' options in the GUI)
>>>>>
>>>>>
>>>>> you can get it with
>>>>>
>>>>> $sudo apt-get install cmake-qt-gui
>>>>>
>>>>>
>>>>> Thanks,
>>>>>
>>>>>
>>>>>   Aaron
>>>>>
>>>>>
>>>>> On Sat, Jan 13, 2018 at 3:01 AM, Ankit Parag Shah <aps1 at andrew.cmu.edu
>>>>> > wrote:
>>>>>
>>>>>> Hi all,
>>>>>>
>>>>>> While building DIVA project using the following steps -
>>>>>> https://github.com/Kitware/DIVA, with a fresh Kwiver and fletch
>>>>>> installation steps, I am facing errors while performing the following
>>>>>> installation step.
>>>>>>
>>>>>> $ cmake ../../src -DCMAKE_BUILD_TYPE=Release
>>>>>>
>>>>>> Error is as follows: -
>>>>>>
>>>>>> CMake Error at /usr/share/cmake-3.5/Modules/F
>>>>>> indPackageHandleStandardArgs.cmake:148 (message):
>>>>>>   Could NOT find Eigen3 (missing: EIGEN3_INCLUDE_DIR
>>>>>> EIGEN3_VERSION_OK)
>>>>>>   (Required is at least version "2.91.0")
>>>>>> Call Stack (most recent call first):
>>>>>>   /usr/share/cmake-3.5/Modules/FindPackageHandleStandardArgs.cmake:388
>>>>>> (_FPHSA_FAILURE_MESSAGE)
>>>>>>   CMake/FindEigen3.cmake:81 (find_package_handle_standard_args)
>>>>>>   CMake/kwiver-depends-Eigen.cmake:3 (find_package)
>>>>>>   CMake/kwiver-depends.cmake:4 (include)
>>>>>>   CMakeLists.txt:138 (include)
>>>>>>
>>>>>> Upon researching on Google about the error caused and understanding
>>>>>> use of EIGEN, there are various hacks suggested to overcome the problem.
>>>>>> The problem seems to be within CMAKE which is not able to find
>>>>>> EIGEN3_INCLUDE_DIR in path variable.
>>>>>>
>>>>>> Currently, I am using cmake 3.5.1, may I ask whether it is
>>>>>> recommended to perform hacks or it is better to install latest version of
>>>>>> cmake available going forward.
>>>>>>
>>>>>> Looking forward to your response.
>>>>>>
>>>>>> Kind Regards,
>>>>>> Ankit Shah
>>>>>> Masters Student in Language Technologies
>>>>>> Carnegie Mellon University.
>>>>>>
>>>>>> _______________________________________________
>>>>>> Kwiver-users mailing list
>>>>>> Kwiver-users at public.kitware.com
>>>>>> https://public.kitware.com/mailman/listinfo/kwiver-users
>>>>>>
>>>>>>
>>>>>
>>>>
>>
>
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