[ITK-users] [ANN] ITK 4.9 Release Candidate 1 is ready for testing!
Simon Alexander
skalexander at gmail.com
Wed Nov 25 11:29:40 EST 2015
Two of the three failures look like truncation issues (like
https://open.cdash.org/testDetails.php?test=395263772&build=4117158)
The other (
https://open.cdash.org/testDetails.php?test=395264938&build=4117158) is
less obvious.
If I have time this evening I'll try and have a look at these.
Is your standard test build in 32 bit ? That might explain the difference
if there are some underlying type assumptions, but not obvious why 2015
would trigger but not 2013.
On Wed, 25 Nov 2015 at 11:01 Matt McCormick <matt.mccormick at kitware.com>
wrote:
> Ah, cool! Here:
>
> https://open.cdash.org/viewBuildError.php?type=1&buildid=4117158
>
> Could you please look into the test failures?
>
> @Hyun Jae, could you please look into the KWStyle warnings?
>
> Thanks,
> Matt
>
>
> On Wed, Nov 25, 2015 at 10:55 AM, Simon Alexander <skalexander at gmail.com>
> wrote:
> > Sorry, if I wasn't clear - I submitted two builds yesterday from
> SIMON-LAP,
> > (actually 3 as I wasn't sure the config was right on the first one).
> VS2013
> > was green, three failures on VS2015 (and 18 warnings). Looks like a
> > truncation problem on the resuts.
> >
> > On Wed, 25 Nov 2015 at 10:51 Matt McCormick <matt.mccormick at kitware.com>
> > wrote:
> >>
> >> Hi Simon,
> >>
> >> Thanks for testing.
> >>
> >> We have a Visual Studio 2015 build on the dashboard that is green:
> >>
> >> https://open.cdash.org/buildSummary.php?buildid=4117955
> >>
> >> Are there any different flags? Could you please submit an Experimental
> >> build?
> >>
> >> ctest -j 4 -M Experimental -T Configure -T Build -T Test -T Submit -C
> >> Release
> >>
> >> from a fresh build tree.
> >>
> >> Thanks,
> >> Matt
> >>
> >> On Wed, Nov 25, 2015 at 9:07 AM, Simon Alexander <skalexander at gmail.com
> >
> >> wrote:
> >> > Looks like a few problems with x64 build on visual studio 2015 - do
> you
> >> > have
> >> > a test machine in this configuration?
> >> >
> >> > On Mon, 23 Nov 2015 at 17:53 Matt McCormick <
> matt.mccormick at kitware.com>
> >> > wrote:
> >> >>
> >> >> On behalf of the Insight Toolkit community, we are proud to announce
> >> >> that
> >> >> ITK 4.9 release candidate 1 has been tagged and is available for
> >> >> testing!
> >> >>
> >> >> Please take this opportunity to test the new features in the release
> >> >> candidate.
> >> >>
> >> >>
> >> >> To obtain the source code,
> >> >>
> >> >> git clone http://itk.org/ITK.git
> >> >> cd ITK
> >> >> git checkout -q --detach v4.9rc01
> >> >>
> >> >> For more details, please see the Git documentation [1].
> >> >>
> >> >>
> >> >> A few selected highlights for this release:
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >> * New Remote modules: the Cuberille module for smooth generation of
> >> >> meshes
> >> >> from binary segmentation images, and the AnisotropicDiffusionLBR
> module
> >> >> improved edge-preserving smoothing.
> >> >> * Build your own ITK module outside the source tree, add continuous
> >> >> integration testing on GitHub, and easily add Python wrapping for
> your
> >> >> C++
> >> >> algorithms.
> >> >> * Python wrapping, including Python 3, builds faster with a more
> >> >> standard
> >> >> installation
> >> >> * Improved performance of itk::Image::GetPixel and operations on
> >> >> itk::VariableLengthVector’s
> >> >> * Generate a FlatStructuringElement from an image
> >> >> * Point-set registration with time-varying B-splines
> >> >> * Module dependencies can now be specified as public / private /
> >> >> compile /
> >> >> test
> >> >>
> >> >>
> >> >> Please test the release candidate and share your experiences on the
> >> >> mailing list, issue tracker, and Gerrit Code Review. The new module
> >> >> dependency specification mechanism may unearth missing dependencies
> for
> >> >> projects that use ITK COMPONENTS with the CMake find_package command.
> >> >>
> >> >>
> >> >> An Experimental build, which demonstrates how the test suite performs
> >> >> on
> >> >> your local build system, can be submitted to the dashboard [2] with:
> >> >>
> >> >> mkdir ../ITK-build
> >> >> cd ../ITK-build
> >> >> cmake ../ITK
> >> >> ctest -j 4 -M Experimental -T Configure -T Build -T Test -T Submit
> >> >>
> >> >> Visual Studio builds must also add “-C Release” to the ctest command.
> >> >>
> >> >> Notify the mailing list if there are any unexpected failures.
> Testing
> >> >> your own applications against the RC is also appreciated.
> >> >>
> >> >>
> >> >> Congratulations and well done to the 35 contributors to this release.
> >> >> We
> >> >> would especially like to recognize the new contributors: Mikhail
> >> >> Isakov,
> >> >> Betsy McPhail, Alexander Leinoff, Shawn Waldon, Tobias Wood, Seun
> >> >> Odutola,
> >> >> Hyun Jae Kang, Lucas Gandel, Adam Snyder, Junjie Bai, Pablo
> >> >> Hernandez-Cerdan, Abhishek Tiwari, Eugene Prilepin, Zach Williamson,
> >> >> Luc
> >> >> Hermitte, Laurentiu Nicola, and Floris Berendsen.
> >> >>
> >> >>
> >> >> The final release is scheduled for mid-December.
> >> >>
> >> >>
> >> >> [1] http://www.itk.org/Wiki/ITK/Git
> >> >>
> >> >> [2] http://open.cdash.org/index.php?project=Insight
> >> >>
> >> >>
> >> >>
> >> >> New Features
> >> >> ---------------------
> >> >>
> >> >> Wrapping improvements
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >> * Python 3 supported
> >> >> * Wrapping builds much faster due to CastXML binaries
> >> >> * LandmarkBasedTransformInitializer now wrapped
> >> >> * NumPy bridge with VisualStudio
> >> >> * Wrapping for the MinimalPathExtraction module
> >> >> * Wrapping is now installed into Python’s site-packages directory in
> >> >> the
> >> >> “itk” package
> >> >> * Wrapping package size is decreased
> >> >> * Better package portability on Mac OSX
> >> >>
> >> >>
> >> >> New Remote Modules
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >> * Cuberille
> >> >> * Insight Journal Article: http://hdl.handle.net/10380/3186
> >> >> * AnisotropicDiffusionLBR
> >> >> * Insight Journal Article: http://hdl.handle.net/10380/3505
> >> >> * Web browser reproducibility:
> >> >> http://www.kitware.com/blog/home/post/942
> >> >>
> >> >>
> >> >> Core Improvements
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >> * External Modules can now be developed outside of the ITK source
> tree
> >> >> and
> >> >> on GitHub
> >> >> * Details: http://www.kitware.com/blog/home/post/997
> >> >> * New utilities in itk::Math:
> >> >> * AlmostEquals
> >> >> * NotAlmostEquals
> >> >> * ExactlyEquals
> >> >> * NotExactlyEquals
> >> >> * New itk::NumericTraits
> >> >> * IsInteger
> >> >> * IsSigned
> >> >> * Improved C++11 support
> >> >> * New ITK_DELETE_FUNCTION macro for “=delete”
> >> >> * New ITK_NOEXCEPT macro for the “noexcept” keyword
> >> >> * Improved capabilities of itk::ResourceProbe and
> >> >> itk::ResourceProbesCollectorBase
> >> >> * Improve numerical stability in VNL eigen system estimation
> >> >> * itksys_ios:: and itksys_stl:: have been remove (use std::)
> >> >>
> >> >>
> >> >> Filtering Improvements
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >> * Generate a FlatStructuringElement from an image
> >> >> * WarpImageFilter support VectorImage’s
> >> >> * ConvertLabelMap supports different LabelMap types
> >> >> * ImageToPathFilter moved from the ITKReview to the ITKPath module
> >> >> * itk::MovingHistogramImageFilter moved to the ITKImageFilterBase
> >> >> module
> >> >>
> >> >>
> >> >> Registration Improvements
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >> * Point-set registration with time-varying B-splines
> >> >>
> >> >>
> >> >> Build Improvements
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >> * Module dependencies can now be specified as public / private /
> >> >> compile /
> >> >> test
> >> >> * BUILD_EXAMPLES CMake option is now OFF by default
> >> >> * Option to export all library symbols on Windows:
> >> >> * Details: http://www.kitware.com/blog/home/post/939
> >> >> * Expat third party library is now name mangled
> >> >> * Many more modules can be built as shared libraries
> >> >> * KWStyle is automatically built and configured when tests are built
> >> >>
> >> >>
> >> >> Performance Improvements
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >> * New MetaProgrammingLibrary namespace (itk::mpl) holds members for
> >> >> metaprogramming
> >> >> * itk::mpl::{TrueType,FalseType}
> >> >> * itk::mpl::{If,Not,And,Or,Xor}
> >> >> * itk::mpl::EnableIf
> >> >> * itk::mpl::IsBaseOf
> >> >> * itk::mpl::IsConvertible
> >> >> * itk::mpl::IsNumber
> >> >> * itk::mpl::IsSame
> >> >> * itk::mpl::PromoteType
> >> >> * Image::GetPixel performance improvements
> >> >> * Many itk::VariableLengthVector performance improvements
> >> >> * AdaptiveHistogramEqualization uses a moving histogram
> >> >> * WarpImageFilter performance improvements
> >> >>
> >> >>
> >> >> Documentation Improvements
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >> * Updates to the Software Guide, Doxygen, Wiki and Sphinx Examples
> >> >> * ITK Software Guide improvements
> >> >> * How to use Python wrapping
> >> >> * How to create an ITK module
> >> >> * Improvements to segmentation examples
> >> >> * Expanded Canny edge detection example
> >> >> * Expanded tree container example
> >> >>
> >> >>
> >> >> Third Party Library Updates
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >> * FFTW updated to latest upstream
> >> >> * Build with recent OpenCV 2 and 3
> >> >> * Build with the latest VTK
> >> >> * PNG update to the latest upstream
> >> >> * GDCM updated to the latest upstream
> >> >> * KWSys updated to the latest upstream
> >> >> * MINC updated to the latest upstream
> >> >> * SWIG updated to the latest upstream
> >> >> * Third party PNG and MINC are now Git subtrees
> >> >>
> >> >>
> >> >> Style improvements -- ITK gets more stylish with every release!
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >> * Private copy constructors and operator= use ITK_DELETE_FUNCTION
> >> >>
> >> >>
> >> >> Improved code coverage -- we are at 84.9%!
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >>
> >> >> * *Lots* of important bug fixes
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >>
> >> >> * And much more! See details in the log below.
> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
> >> >>
> >> >>
> >> >>
> >> >> Changes from v4.8.0..v4.9rc01
> >> >> --------------------------------------------
> >> >>
> >> >>
> >> >> Abhishek Tiwari (1):
> >> >> BUG: "tmpImageIndex" not initialized to 0.
> >> >>
> >> >> Adam Snyder (1):
> >> >> PERF: Reworked MMI Threading using a per-thread buffer
> >> >>
> >> >> Alexander Leinoff (6):
> >> >> ENH: Adds IsInteger and IsSigned to NumericTraits.
> >> >> COMP: Doxygen itkMath.h 'OneValue()' could not be resolved.
> >> >> ENH: Adds ExactlyEquals and NotExactlyEquals functions to
> >> >> itkMath.h
> >> >> COMP: Removes floating-point equality checks
> >> >> ENH: COMP: Adds support for complex values to Math::AlmostEquals
> >> >> ENH: Updates fftw dependency
> >> >>
> >> >> Arnaud Gelas (5):
> >> >> COMP: fix warning (unused local typedef)
> >> >> COMP: simplify ITKVideoBridgeOpenCV dependency
> >> >> DOC: add doxgen documentation for
> >> >> BinaryImageToLevelSetImageAdaptor
> >> >> ENH: add tests to exercise itk::ThreadedIteratorRangePartitioner
> >> >> COMP: fix compilation error with OpenCV2 and OpenCV3
> >> >>
> >> >> Betsy McPhail (1):
> >> >> BUG: Improve buffer alignment in OctreeNode .
> >> >>
> >> >> Bill Hoffman (2):
> >> >> ENH: Use new CMake Windows export symbol dll feature.
> >> >> COMP: Put vnl_export.h in the list of sources so it gets
> >> >> installed.
> >> >>
> >> >> Bill Lorensen (4):
> >> >> COMP: VTkGlue linker errors
> >> >> BUG: Inappropriate use of AlmostEquals
> >> >> ENH: Bump tag for wiki examples
> >> >> ENH: Better layout strategy
> >> >>
> >> >> Brad King (3):
> >> >> ENH: Remove use of include <itksys/ios/*> and itksys_ios::*
> >> >> ENH: Remove use of include <itksys/stl/*> and itksys_stl::*
> >> >> ENH: Update CMake Policy settings in Testing/TestExternal
> project
> >> >>
> >> >> Bradley Lowekamp (31):
> >> >> BUG: Avoid null deference in PrintSelf with default construction
> >> >> ENH: Enable base classes for templates of landmark initializer
> >> >> STYLE: Use "Swap" for ITK member name
> >> >> BUG: Demonstrate Eigen analysis failure
> >> >> BUG: Fix computation of Eigen analysis
> >> >> ENH: Update DiscreteHessianGaussian Test baseline
> >> >> ENH: Correctly demonstrate float point Eigen failure
> >> >> ENH: compile vnl_math_hypot, and use at least double
> >> >> ENH: Adding initial update script from used libpng version.
> >> >> ENH: removing non-subtree files for itkpng
> >> >> ENH: Ported ITK changes for building to subtree merged code
> >> >> ENH: Update libpng update script for v1.6.9
> >> >> BUG: Use ParameterValueType for computation of landmark affine
> >> >> ENH: Wrap LandmarkBasedTransformInitializer
> >> >> BUG: Avoid potential exception in itk::Object::UnRegister
> >> >> ENH: Update itkpng zlib, configuration, and rename
> >> >> ENH: Update itkpng name mangling
> >> >> BUG: Use const pointer in Set method for constant ReferenceImage
> >> >> ivar
> >> >> BUG: Increase tolerance for
> PhysicsBasedNonRigidRegistrationMethod
> >> >> BUG: Demonstrate side effect on registration due to
> BSplineScatter
> >> >> change
> >> >> ENH: Move MovingHistogramImageFilter base classes to
> >> >> ImageFilterBase
> >> >> BUG: Avoid potential exception in itk::Object::UnRegister
> >> >> BUG: Avoid null deference in PrintSelf with default construction
> >> >> BUG: Use const pointer in Set method for constant ReferenceImage
> >> >> ivar
> >> >> ENH: Optimize AdaptiveHistogramEqualization with MovingHistogram
> >> >> base
> >> >> COMP: address sign unsigned comparison warning
> >> >> COMP: Address signed unsigned comparison warning
> >> >> COMP: Address unused member variable and methods in anonymous ns
> >> >> BUG: Fix segfault when with empty IsolatedWatershed Threshold
> >> >> range
> >> >> BUG: Adjust intensity tolerance for PhysicsBasedNonRigid test
> >> >> BUG: Reduce number of targets with MSVC
> >> >>
> >> >> Davis Vigneault (7):
> >> >> DOC: Minor improvements to segmentation examples.
> >> >> DOC: Expanded Canny Edge Detection Example
> >> >> DOC: Expanded TreeContainer Example
> >> >> COMP: Warnings in itkVTKImageExport when compiling with c++11
> >> >> COMP: Warnings in FFTW Classes when compiling with c++11
> >> >> COMP: Update Git Tag for Subdivision Module
> >> >> COMP: Warnings in FFTW Classes when compiling with c++11
> >> >>
> >> >> Dženan Zukić (1):
> >> >> STYLE: better formatting of the "usage" message
> >> >>
> >> >> Eugene Prilepin (1):
> >> >> BUG: Fix a template name formation in python wrappings
> >> >>
> >> >> Floris Berendsen (1):
> >> >> STYLE: Improve naming conventions in comments.
> >> >>
> >> >> Hans Johnson (29):
> >> >> STYLE: Instrument for FixedParameters typedef
> >> >> BUG: Demonstrate DisplacementTransformFailure
> >> >> BUG: FixedParameters should be double precision
> >> >> STYLE: Minor code style issues for MGHIO
> >> >> COMP: Update to version for WikiExamples
> >> >> ENH: Update Sphinx for ITK 4.8.0
> >> >> ENH: Update MGHIO to be shared lib
> >> >> ENH: Provide consistent floating point comparisons
> >> >> BUG: Fix MGHIO to fix write failures
> >> >> PERF: Remove floating point as sentinal value
> >> >> COMP: Const correctness needs to be maintained
> >> >> BUG: Preserve backwards compatibility
> >> >> DOC: Provide consistent naming in comments
> >> >> ENH: Conversion between transform type tolerance
> >> >> STYLE: Prefer initialization to assignment
> >> >> ENH: Missing ITK_OVERRIDE
> >> >> COMP: Need to propagate ITKGDCM
> >> >> COMP: Need to propagate ITKGDCM
> >> >> COMP: Add missing ITK_OVERRIDE
> >> >> STYLE: Minor code style issues for MGHIO
> >> >> COMP: Update to version for WikiExamples
> >> >> ENH: Update Sphinx for ITK 4.8.0
> >> >> ENH: Update MGHIO to be shared lib
> >> >> BUG: Fix MGHIO to fix write failures
> >> >> ENH: C++11 allows for rigorous =delete
> >> >> COMP: Remove unnecessary failing assert test
> >> >> ENH: Ignore internal files for the Clion editor
> >> >> COMP: Fix VNL compilation for wider C++11 support
> >> >> BUG: In configuration test need to mirror code
> >> >>
> >> >> Hyun Jae Kang (27):
> >> >> BUG: Remove std::cout calls from class
> >> >> BUG: Avoid an unexpected output of static_cast
> >> >> BUG: Update python example codes for ImageRegistration
> >> >> BUG: Retrieve the missed wrap file
> >> >> BUG: itkVTKImageIO class does not handle blank lines in VTK file
> >> >> header.
> >> >> BUG: Fix HDF5 CMake configuration with VS2015
> >> >> BUG: Fix a compilation issue on ITK4 with FFTW and shared
> >> >> libraries
> >> >> BUG: Fixed older XCode linking error
> >> >> ENH: Use CastXML binaries when building with x86_64 Mac OS X
> >> >> BUG: Remove std::cout calls from class
> >> >> BUG: itkVTKImageIO class does not handle blank lines in VTK file
> >> >> header.
> >> >> BUG: Fixed older XCode linking error
> >> >> ENH: Add automatic KWStyle build and configuration setup
> >> >> COMP: KWStyle shadow, format-nonliteral and autological-compare
> >> >> warning.
> >> >> COMP: Fixed the warning messages from itkGPU Module
> >> >> COMP: Fixed a warning message of unused-private-field
> >> >> COMP: Apply latest version of KWStyle
> >> >> COMP: Update KWStyle to fix its additional warning messages
> >> >> COMP: Update KWStyle to fix its additional warning messages
> >> >> COMP: Fix data-conversion warning messages on Windows
> >> >> ENH: Update itkResourceProbe to calculate statistical data
> >> >> COMP: Fix data-conversion warning messages on VS14
> >> >> COMP: Fixed 'std::sqrt' : ambiguous call to overloaded function
> >> >> ENH: Update the Report() function of
> >> >> itkResourceProbesCollectorBase
> >> >> COMP: Fix data-conversion warning message on itkResourceProbe
> >> >> COMP: Fix additional warning messages of KWStyle
> >> >> COMP: Fix data-conversion warning messages
> >> >>
> >> >> Jon Haitz Legarreta (6):
> >> >> ENH: Add test for itkStatisticsUniqueLabelMapFilter
> >> >> BUG: Fix compilation issues for
> StatisticsUniqueLabelMapFilterTest
> >> >> BUG: Fix comparison issues for itkStatisticsUniqueLabelMapFilter
> >> >> BUG: Test for StatisticsUniqueLabelMapFilter stability
> >> >> ENH: Add test for itkParametricStpaceToImageSpaceFilter
> >> >> ENH: Improve code coverage for
> >> >> itkParametricSpaceToImageSpaceMeshFilter
> >> >>
> >> >> Julien Michel (1):
> >> >> ENH: Support of VectorImage as template parameters for
> >> >> WarpImageFilter
> >> >>
> >> >> Junjie Bai (2):
> >> >> BUG: ConvertLabelMap with different LabelMapTypes
> >> >> BUG: LabelObject CopyAttribute support different LabelObject
> type
> >> >>
> >> >> KWSys Robot (4):
> >> >> KWSys 2015-07-10 (c9336bcf)
> >> >> KWSys 2015-07-30 (f63febb7)
> >> >> KWSys 2015-08-24 (cdaf522c)
> >> >> KWSys 2015-08-28 (dc3fdd7f)
> >> >>
> >> >> LIBPNG Upstream (2):
> >> >> PNG 2009-04-06 (e68f5a36)
> >> >> PNG 2014-02-05 (3e753eb8)
> >> >>
> >> >> Laurentiu Nicola (2):
> >> >> PERF: Avoid temporary smartptr in ProcessObject::GetInput
> >> >> PERF: Optimize WarpImageFilter by avoiding refcount bouncing
> >> >>
> >> >> Luc Hermitte (8):
> >> >> PERF: itk::Image::GetPixel() performance improvment.
> >> >> PERF: Performance enhancements on VariableLengthVectors 1/...
> >> >> ENH: Dependencies on itkVariableLengthVector.h reduced
> >> >> BUG: Error in VariableLengthVector Unit Tests
> >> >> PERF: Performance enhancements on VLV 2/...
> >> >> PERF: Performances enhancements on VLV 3/...
> >> >> COMP: Fix signed/unsigned warnings
> >> >> BUG: std::copy/fill on empty VLV
> >> >>
> >> >> Lucas Gandel (4):
> >> >> ENH: Move ImageToPathFilter from ITKReview to ITKPath module.
> >> >> BUG: Fixing ImageToPathFilter wrapping call from Review Module
> >> >> STYLE: Fix KWStyle dashboard errors
> >> >> BUG: Fix external module BUILD_SHARED_LIBS status
> >> >>
> >> >> Mathieu Malaterre (1):
> >> >> BUG: Name mangle the included expat third party library.
> >> >>
> >> >> Matthew McCormick (94):
> >> >> ENH: Change itkSystemInformationTest to
> itkCMakeConfigurationTest.
> >> >> ENH: Add AnisotropicDiffusionLBR Remote Module.
> >> >> ENH: Bump ITK version to 4.9.0.
> >> >> BUG: Remove std::cout calls from classes.
> >> >> COMP: Remove unused argument in ConditionVariableNoThreads.
> >> >> BUG: Implement UpdateLargestPossibleRegion for
> >> >> ImageToVTKImageFilter.
> >> >> COMP: Add link interface specification for wrapping
> >> >> target_link_libraries.
> >> >> STYLE: Fix indentation in itkMINCTransformIOFactory.cxx.
> >> >> COMP: Fix MINCTransformIO factory registration.
> >> >> COMP: Add -D_LARGEFILE64_SOURCE for HDF5 with Emscripten-1.
> >> >> COMP: Remove unknown doxygen command in AnisotropicDiffusionLBR.
> >> >> BUG: Initialize mutex for 32 bit AtomicInt.
> >> >> ENH: Use CastXML binaries when building with x86_64 Linux.
> >> >> STYLE: Rename gccxml -> castxml in {idx,igenerator}.py.
> >> >> COMP: Disable the gold linker for static builds on Ubuntu 14.04.
> >> >> ENH: Use Windows binaries for CastXML.
> >> >> ENH: Add better scoping in igenerator.py.
> >> >> BUG: Fix CMAKE_BUILD_TYPE initialization with Ninja + MSVC.
> >> >> BUG: LevelSetsv4 used signed char instead of char.
> >> >> ENH: Add better scoping to idx.py.
> >> >> COMP: Define newSize and oldSize in VariableLengthVector.
> >> >> STYLE: Use prefix increment operator in ImageBase.
> >> >> DOC: Correct spelling of Continuous.
> >> >> ENH: Add more progress information to IterativeClosestPoint2.
> >> >> BUG: Build BridgeNumPy with Visual Studio.
> >> >> ENH: Add ITKModuleExternal.cmake
> >> >> COMP: Wrap Image< bool, D > for FlatStructuringElement.
> >> >> BUG: Use CastXML binary built in Release.
> >> >> BUG: ContinuousIndex should not be templated over TCoordRep.
> >> >> COMP: Set CMP0054 to new.
> >> >> COMP: Address line length too long for Software Guide.
> >> >> COMP: Fix CannyEdgeDetectionImageFilter.cxx types.
> >> >> BUG: Support Python 3 wrapping module initialization.
> >> >> BUG: Update itkTemplate.py for Python 3.
> >> >> BUG: Update itkExtras.py for Python 3.
> >> >> BUG: Prevent Python callback addition recursion.
> >> >> BUG: Fix test scripts for Python 3.
> >> >> BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.
> >> >> ENH: Allow projects to build against an external module.
> >> >> ENH: Replace CABLE_CONFIGURATION with ITK_WRAPPING_PARSER.
> >> >> ENH: Rename _cable_ to _wrappers_.
> >> >> BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.
> >> >> BUG: Define ITK_WRAPPING_PARSER when wrapping.
> >> >> COMP: Do not use C++11 alignas in itkAlignedTypedef.
> >> >> ENH: Bump CMakeLists.txt version to 4.8.1.
> >> >> BUG: Pass the CMAKE_CXX_FLAGS to castxml.
> >> >> ENH: Bump CastXML version to 2015-30-29.
> >> >> ENH: Bump LLVM / Clang to 3.7.0.
> >> >> COMP: Avoid itklibminc linking with ITK_USE_SYSTEM_HDF5.
> >> >> COMP: Add missing ITKIOImageBase dependency for
> ITKTransformMINC.
> >> >> COMP: Use itkSimpleNewMacro in
> >> >> ThreadedIteratorRangePartitionerTest.
> >> >> ENH: Add wrapping support for building modules externally.
> >> >> BUG: Fix KWStyle test paths when building a module externally.
> >> >> ENH: Add Cuberille Remote module.
> >> >> COMP: Remove carriage returns from Cuberille remote.
> >> >> COMP: Remove unused argument in ConditionVariableNoThreads.
> >> >> DOC: Correct spelling of Continuous.
> >> >> ENH: Bump the MinimalPathExtraction Remote to 2015-10-20.
> >> >> COMP: Fix KernelTransform SetFixedParameters argument type.
> >> >> STYLE: Use prefix increment operator in ImageBase.
> >> >> COMP: Use ITK's pygccxml by correctly setting up the sys.path
> >> >> Revert "COMP: Put vnl_export.h in the list of sources so it gets
> >> >> installed."
> >> >> BUG: Revert "BUG: ConvertLabelMap with different LabelMapTypes"
> >> >> ENH: Marking wrapping CMake configuration variables as advanced.
> >> >> STYLE: Rename CASTXML to CASTXML_EXECUTABLE.
> >> >> COMP: Non-virtual copy attribute members in LabelMap cannot have
> >> >> override.
> >> >> COMP: Add wrapping for AdaptiveHistogramEqualizationImageFilter.
> >> >> COMP: Add itkMacro.h to itkPromoteType.h for ITK_EXCEPT.
> >> >> ENH: Remove CMake version check in ITKModuleHeaderTest.cmake
> >> >> BUG: Improve KWStyle ExternalProject utilization.
> >> >> ENH: Remove old KWStyle build script.
> >> >> COMP: Address VariableLengthVector Doxygen rhs @param not found.
> >> >> ENH: Rename WRAPPING_LIBRARY_GROUPS to WRAPPING_SUBMODULE_ORDER.
> >> >> ENH: Install Python bindings into site-packages.
> >> >> ENH: Improve readability of Python site-packages path detection.
> >> >> COMP: DiscreteGaussianDerivativeImageFilter unsigned expression
> >> >> warning.
> >> >> BUG: ITKCommon publically depends on ITKDoubleConversion.
> >> >> COMP: Improve scoping in CovariantVectorGeometryTest.
> >> >> ENH: Improves names and export of module dependencies.
> >> >> STYLE: Improve namespace bracket style in itkIsConvertible.
> >> >> COMP: Set CMP0054 to new.
> >> >> BUG: Remove unused wrapping files.
> >> >> BUG: Do install install wrapping development files.
> >> >> ENH: Add WRAP_ITK_INSTALL_COMPONENT_IDENTIFIER.
> >> >> BUG: Remove duplicate inclusion of wrapping submodules.
> >> >> COMP: Do not use C++ style comments for Doxygen cond.
> >> >> BUG: Fix detection of the gold linker.
> >> >> BUG: Update Python package installation locations.
> >> >> ENH: Bump CMakeLists.txt version to 4.8.2.
> >> >> ENH: Change BUILD_EXAMPLES default to OFF.
> >> >> BUG: Use 'from itk import ITKCommon' in module2module test.
> >> >> COMP: Link to VTK Python when built with Kits support.
> >> >> BUG: Install itk_minc2.h header.
> >> >> COMP: ITKIOMINC has a public dependency on ITKIOImageBase.
> >> >>
> >> >> Michka Popoff (9):
> >> >> ENH: Update to swig 3.0.7
> >> >> ENH: Do not link against specific Python library on OS X
> >> >> COMP: Fix wrapping warnings when building with
> >> >> ITK_WRAP_IMAGE_DIMS=2
> >> >> COMP: Add missing wrapping for TransformBase
> >> >> COMP: Use ITK's pygccxml by correctly setting up the sys.path
> >> >> COMP: Disable incompatible modules when using Python 3 wrapping
> >> >> COMP: Move MovingHistogramImageFilterBase wrapping to
> >> >> ImageFilterBase
> >> >> module
> >> >> COMP: Disable incompatible modules when using Python 3 wrapping
> >> >> ENH: Allow operations on Indexes and Offsets in Python
> >> >>
> >> >> Mikhail Isakov (1):
> >> >> BUG: DiffusionTensor3DReconstruction segfault if no baseline
> image
> >> >>
> >> >> Nick Tustison (5):
> >> >> BUG: Set a default b-spline epsilon.
> >> >> ENH: Adding testing for closed loop.
> >> >> BUG: Updating B-spline classes with the same epsilon strategy.
> >> >> PERF: Switch vnl_vectors for fixed arrays.
> >> >> ENH: Point-set registration with time-varying B-spline.
> >> >>
> >> >> Olivier Commowick (3):
> >> >> BUG: Correct discrepancy in tridiagonal reduction wrt VNL eigen
> >> >> system
> >> >> BUG: Correct under/overflows in vnl_math_hypot (taken from
> pythag
> >> >> from V3P)
> >> >> BUG: Switch eigenvalues computation to double
> >> >>
> >> >> Pablo Hernandez-Cerdan (2):
> >> >> ENH: Help class for itkFlatStructuringElement with constructor
> >> >> from
> >> >> images.
> >> >> COMP: Fix test errors and warnings in FlatStructuringElement.
> >> >>
> >> >> Seun Odutola (1):
> >> >> COMP: Fixed name clash with Apple header (check Macro), renamed
> >> >> check
> >> >> to Check
> >> >>
> >> >> Shawn Waldon (1):
> >> >> COMP: Set target OS X version in environment for tools using
> >> >> compiler
> >> >>
> >> >> Simon Alexander (1):
> >> >> BUG: incorrect closest point computation
> >> >>
> >> >> Tobias Wood (2):
> >> >> BUG: LBFGSB was printing messages even with debug switched off.
> >> >> BUG: Removed an unguarded print statement.
> >> >>
> >> >> Vladimir S. FONOV (9):
> >> >> BUG: Missing ITKIOMINC_EXPORT on __Private()
> >> >> COMP: Changing the order of HDF5 library components
> >> >> COMP: Splitting up IOMINC module into two parts: MINC and
> >> >> Transform
> >> >> STYLE: updated comments to properly reference LIBMINC
> >> >> ENH: Add script to merge upstream MINC as a subtree
> >> >> MINC 2015-07-23 (c033d431)
> >> >> COMP: Update MINC CMake code
> >> >> MINC 2015-08-18 (6d7e3ba8)
> >> >> MINC 2015-09-13 (95cd5374)
> >> >>
> >> >> Xiaoxiao Liu (1):
> >> >> DOC: update email address for xiaoxiao.
> >> >>
> >> >> Zach Williamson (10):
> >> >> BUG: Use correct libraries for ImageFusion tests
> >> >> ENH: Consolidate Library Dependencies
> >> >> COMP: Add a missing link to Review module
> >> >> COMP: Use correct linking macro in DCMTK
> >> >> BUG: Use correct libraries for TestKernel tests
> >> >> COMP: Fix inconsistant naming of GPUPDEDeformableRegistration
> >> >> ENH: Use new linking system macros
> >> >> PERF: Avoid searching private dependencies for include
> directories
> >> >> COMP: Recover missing dependencies
> >> >> ENH: use new linking macros in Filtering module
> >> >>
> >> >>
> >> >>
> >> >> -----------------------------------------------------
> >> >> Errors or omissions? Please fix them here:
> >> >>
> >> >>
> >> >>
> >> >>
> https://docs.google.com/document/d/1j3IAZFfi0ToO8N6hTr0fVTTMmHIMkXAxx0AsAajsYuM/edit
> >> >> _____________________________________
> >> >> Powered by www.kitware.com
> >> >>
> >> >> Visit other Kitware open-source projects at
> >> >> http://www.kitware.com/opensource/opensource.html
> >> >>
> >> >> Kitware offers ITK Training Courses, for more information visit:
> >> >> http://www.kitware.com/products/protraining.php
> >> >>
> >> >> Please keep messages on-topic and check the ITK FAQ at:
> >> >> http://www.itk.org/Wiki/ITK_FAQ
> >> >>
> >> >> Follow this link to subscribe/unsubscribe:
> >> >> http://public.kitware.com/mailman/listinfo/insight-users
>
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