[ITK-users] [ITK] Registration in SimpleITK

[Bradley Lowekamp]

Hello,

Binaries for the current master are on the dashboard and now include the CSharp for windows 64. You can find more information about downloading nightly binaries here:
http://www.itk.org/Wiki/SimpleITK/GettingStarted#Nightly_binaries

Brad

On Mar 12, 2015, at 8:50 PM, Bradley Lowekamp <blowekamp at mail.nih.gov> wrote:

> Hello,
> 
> Yes, it is more or less the same process. Grab all the ITK and SimpleITK dlls from the bin directories and place them in your path.
> 
> The SimpleITK Superbuild INSTALL target will actually install ITK and SimpleITK's core libraries correctly in to the CMake specified path. The installation target for the superbuild project just doesn't install the target languages ( every language has at least one own way of doing things that CMake does not know about ). You could use this to install all the needed dlls into a defined path. Then just grab the CSharp dll for your project and that should work too.
> 
> Also I worked on the explicit instantiation in SimpleITK today. I was able to reduce the size of the .o files on Linux by 30% by explicitly instantiating about 20 classes with their used templates. This is expected to resolve the linking and packaging issues on windows. So a solution is forth coming.
> 
> Brad
> 
> On Mar 12, 2015, at 7:26 PM, Matias Montroull <matimontg at gmail.com> wrote:
> 
>> Hi Brad, thanks for the explanation. I'm using C#, would that be the same process?
>> 
>> On Wed, Mar 11, 2015 at 8:56 PM, Bradley Lowekamp <blowekamp at mail.nih.gov> wrote:
>> Hello,
>> 
>> If you are willing to compile it yourself you can get it to work with just a little bit of effort.
>> 
>> Compile the SimpleITK superbuild with shared libraries enabled. Do the usual installation of SimpleITK from the super build [1], this will install the SimpleITK python library into your site-packages. However, this libraries also depends on all the SimpleITK an ITK dlls (not installed or packaged), these should be in the superbuild's bin directory. These need to be in your run-time path when importing SimpleITK. This can be done either by modifying you PATH environment variable you copying them to the appropriate place ( which may depend on the python environment, and there are likely several alternatives).
>> 
>> Brad
>> 
>> [1] http://www.itk.org/Wiki/SimpleITK/GettingStarted#Python_installation
>> 
>> On Mar 11, 2015, at 7:31 PM, Matias Montroull <matimontg at gmail.com> wrote:
>> 
>>> 
>>> My project is using 64 bits and some DLL I use as well, I've ran into issues when using the beta version because is 32 bits. I guess I'll wait until the final release is done.
>>> Thanks,
>>> Matias.
>>> 
>>> On Wed, Mar 11, 2015 at 7:54 PM, Matias Montroull <matimontg at gmail.com> wrote:
>>> Thanks Bradley, I'll give it a try. I downloaded version 0.8.1 but wasn't aware of this new Beta release
>>> Thanks,
>>> Matias.
>>> 
>>> On Wed, Mar 11, 2015 at 7:46 PM, Bradley Lowekamp <blowekamp at mail.nih.gov> wrote:
>>> Hello Matias,
>>> 
>>> Currently there is SimpleITK 0.9b01 [1] out with the registration framework.
>>> 
>>> With it you can do things like this:
>>> http://insightsoftwareconsortium.github.io/SimpleITK-Notebooks/56_VH_Registration1.html
>>> or
>>> http://www.itk.org/SimpleITKDoxygen/html/ImageRegistrationMethod2_8py-example.html
>>> 
>>> Please give it a try and let us know how it work for you.
>>> 
>>> Enjoy,
>>> Brad
>>> 
>>> [1] http://www.itk.org/Wiki/SimpleITK/ReleaseNotes#SimpleITK_-_Version_0.9.0_Release
>>> 
>>> On Mar 11, 2015, at 6:32 PM, Matias Montroull <matimontg at gmail.com> wrote:
>>> 
>>>> Hi,
>>>> 
>>>> is it possible to do registration in SimpleITK? I mean, something like in this example:
>>>> http://public.kitware.com/cgi-bin/viewcvs.cgi/Insight/Examples/Registration/ImageRegistration2.cxx?view=markup
>>>> 
>>>> Thanks,
>>>> 
>>>> Matias,
>>>> _____________________________________
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>>> 
>>> 
>>> 
>> 
>> 
> 
> _____________________________________
> Powered by www.kitware.com
> 
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
> 
> Kitware offers ITK Training Courses, for more information visit:
> http://www.kitware.com/products/protraining.php
> 
> Please keep messages on-topic and check the ITK FAQ at:
> http://www.itk.org/Wiki/ITK_FAQ
> 
> Follow this link to subscribe/unsubscribe:
> http://public.kitware.com/mailman/listinfo/insight-users

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