[ITK-users] SimpleITK Anaconda Issue

Yaniv, Ziv Rafael (NIH/NLM/LHC) [C] zivrafael.yaniv at nih.gov
Thu Aug 27 15:55:04 EDT 2015


Hello Tassilo,

Please follow the instructions found in our FAQ 'I am using the binary distribution of SimpleITK for Anaconda, why do I get an error about libpng?' found here: http://www.itk.org/Wiki/SimpleITK/FAQ

We are working on a more permanent solution for our next release.

               regards
                      Ziv

________________________________
From: Tassilo Klein [tjklein at gmail.com]
Sent: Thursday, August 27, 2015 3:42 PM
To: insight-users at itk.org
Subject: [ITK-users] SimpleITK Anaconda Issue

Hi,

I have issues getting my SimpleITK running on a Linux machine.

I used to get errors:

http://public.kitware.com/pipermail/community/2015-May/009117.html


ImportError: libpng15.so.15: cannot open shared object file: No such


Then I took an earlier version of libpng as mentioned here:

http://public.kitware.com/pipermail/community/2015-May/009120.html

conda install libpng=1.5.13


But then I get the following error:


/home/tjklein/anaconda/lib/python2.7/site-packages/matplotlib/colorbar.py in <module>()
     32 import matplotlib.artist as martist
     33 import matplotlib.cbook as cbook
---> 34 import matplotlib.collections as collections
     35 import matplotlib.colors as colors
     36 import matplotlib.contour as contour

/home/tjklein/anaconda/lib/python2.7/site-packages/matplotlib/collections.py in <module>()
     25 import matplotlib.artist as artist
     26 from matplotlib.artist import allow_rasterization
---> 27 import matplotlib.backend_bases as backend_bases
     28 import matplotlib.path as mpath
     29 from matplotlib import _path

/home/tjklein/anaconda/lib/python2.7/site-packages/matplotlib/backend_bases.py in <module>()
     54
     55 import matplotlib.tight_bbox as tight_bbox
---> 56 import matplotlib.textpath as textpath
     57 from matplotlib.path import Path
     58 from matplotlib.cbook import mplDeprecation

/home/tjklein/anaconda/lib/python2.7/site-packages/matplotlib/textpath.py in <module>()
     17 from matplotlib.path import Path
     18 from matplotlib import rcParams
---> 19 import matplotlib.font_manager as font_manager
     20 from matplotlib.ft2font import FT2Font, KERNING_DEFAULT, LOAD_NO_HINTING
     21 from matplotlib.ft2font import LOAD_TARGET_LIGHT

/home/tjklein/anaconda/lib/python2.7/site-packages/matplotlib/font_manager.py in <module>()
     56 import matplotlib
     57 from matplotlib import afm
---> 58 from matplotlib import ft2font
     59 from matplotlib import rcParams, get_cachedir
     60 from matplotlib.cbook import is_string_like

ImportError: libpng16.so.16: cannot open shared object file: No such file or directory


Any idea?

Best,
 Tassilo
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