[ITK-users] Example medical images for teaching Image Segmentation

Matt McCormick matt.mccormick at kitware.com
Fri Oct 24 12:33:41 EDT 2014


Hi Sami,

Thanks for helping to educate the next generation on medical computing
:-). If you happen to use ITK/SimpleITK in your course, please add a
link to the materials in this wiki page [1].

The data used in the examples can be a good resource.

Some very nice examples that illustrate level sets segmentation can be
found here [2] [3] [4] [5] [6].

Thanks,
Matt


[1] http://www.itk.org/Wiki/ITK/Documentation

[2] http://itk.org/ITKExamples/src/Segmentation/LevelSetsv4Visualization/VisualizeStaticDense2DLevelSetAsElevationMap/Documentation.html

[3] http://itk.org/ITKExamples/src/Segmentation/LevelSetsv4Visualization/VisualizeStaticDense2DLevelSetZeroSet/Documentation.html

[4] http://itk.org/ITKExamples/src/Segmentation/LevelSetsv4Visualization/VisualizeStaticShi2DLevelSetLayers/Documentation.html

[5] http://itk.org/ITKExamples/src/Segmentation/LevelSetsv4Visualization/VisualizeEvolvingDense2DLevelSetAsElevationMap/Documentation.html

[6] http://itk.org/ITKExamples/src/Segmentation/LevelSetsv4Visualization/VisualizeEvolvingDense2DLevelSetZeroSet/Documentation.html

On Fri, Oct 24, 2014 at 10:36 AM, Sami Koho <sami.koho at gmail.com> wrote:
> Hello,
>
> This is not directly related to ITK,  but I will ask anyway,  out of
> curiosity.  This fall I have been teaching Digital Image Processing to
> Biomedical imaging students.  The next subject will be Image Segmentation
> (Edge detection models, / thresholding).  Would any of you have some
> favorite medical images to demonstrate these subjects?  I can of course use
> any pictures,  but having examples relevant to the students would be nice.
> I have my own libraries as well,  but they are mostly of cells and their
> internals (microscopy lab).  Feel free to send any links/files,  if
> something comes to mind.
>
> Best,
>
> Sami
>
>
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