[ITK-users] [ITK] [SCIFIO] How to make ITK to download the SCIFIO module?

Wed Apr 9 10:30:14 EDT 2014

Hi Joe,

The module should update when running CMake configure.  It is held in
the source tree with the other modules.  If it does not update, there
is a bug.

Thanks,
Matt

On Wed, Apr 9, 2014 at 10:21 AM, Joe Ping-Lin Hsiao <phsiao at cs.unc.edu> wrote:
> Yes SCIFIO is one of the projects in my Visual Studio solution once I
> generate the binaries from CMake.
>
> However from SCIFIO.remote.cmake, the SCIFIO should checkout the tag
> 19f2ca398d9565aef99ed739c14c7de1e3daacfa, which happens in Feb 2014, but in
> my binary it's actually stayed in a commit on March 2013. So I guess I still
> have to update SCIFIO manually? I used a brand new binary folder, so there
> shouldn't been any old SCIFIO code left to confuse ITK.
>
>
> Thanks,
> Joe
>
>
> On Mon, Apr 7, 2014 at 1:15 PM, Matt McCormick <matt.mccormick at kitware.com>
> wrote:
>>
>> Hi Joe,
>>
>> Once the Module_SCIFIO was turned ON once, it is downloaded and it
>> will be built by default as long as BUILD_DEFAULT_MODULES is ON for
>> that source tree.
>>
>> Hope this helps,
>> Matt
>>
>> On Mon, Apr 7, 2014 at 1:04 PM, Mark Hiner <hiner at wisc.edu> wrote:
>> > Hi Joe,
>> >
>> >
>> >> SCIFIO shows up if I git clone a brand new copy of ITK and checkout the
>> >> tag 'v4.5.1' from that, but it won't show up if I git pull my old copy
>> >> (on
>> >> master) and checkout the tag from there.
>> >
>> >
>> > I'm glad you found a workaround, but that sounds like odd behavior.
>> > Forwarding this to the Insight-Users list.. does anyone know why this
>> > might
>> > happen?
>> >
>> > Thanks for the info!
>> >
>> >
>> > On Mon, Apr 7, 2014 at 10:54 AM, Joe Ping-Lin Hsiao <phsiao at cs.unc.edu>
>> > wrote:
>> >>
>> >> SCIFIO shows up if I git clone a brand new copy of ITK and checkout the
>> >> tag 'v4.5.1' from that, but it won't show up if I git pull my old copy
>> >> (on
>> >> master) and checkout the tag from there. Guess I'll just clone a new
>> >> copy
>> >> every time. I am on Windows BTW. Upgrading from an old copy on Mac
>> >> works
>> >> fine though.
>> >>
>> >> Thanks,
>> >> Joe
>> >>
>> >>
>> >> On Fri, Apr 4, 2014 at 7:49 AM, Mark Hiner <hinerm at gmail.com> wrote:
>> >>>
>> >>> Hi Joe,
>> >>>
>> >>>
>> >>>> I don't see an option of 'Module_SCIFIO' or 'Fetch_SCIFIO'
>> >>>
>> >>>
>> >>> Unfortunately those instructions are correct (although it is called
>> >>> "Module_SCIFIO" now, and not "Fetch_SCIFIO" on 4.5.1).
>> >>>
>> >>> What operating system are you using?
>> >>>
>> >>> I am assuming you just did something like (from the top-level of the
>> >>> ITK
>> >>> checkout):
>> >>> * mkdir build
>> >>> * cd build
>> >>> * ccmake ..
>> >>>
>> >>> to start the CMake configuration.. does that sound about right? That
>> >>> works for me locally right now.
>> >>>
>> >>> Thanks,
>> >>> Mark
>> >>>
>> >>>
>> >>> On Wed, Apr 2, 2014 at 2:38 PM, Joe Ping-Lin Hsiao <phsiao at cs.unc.edu>
>> >>> wrote:
>> >>>>
>> >>>> Hi,
>> >>>>
>> >>>>    I 'git pull' the latest ITK code and switch to v4.5.1 by 'git
>> >>>> checkout tags/v4.5.1'. In CMake (advanced mode) I don't see an option
>> >>>> of
>> >>>> 'Module_SCIFIO' or 'Fetch_SCIFIO' like the page says
>> >>>> (http://www.openmicroscopy.org/site/support/bio-formats5/users/itk/).
>> >>>> How do
>> >>>> I make ITK to download SCIFIO?
>> >>>>
>> >>>> Thanks,
>> >>>> Joe
>> >>>>
>> >>>> _______________________________________________
>> >>>> SCIFIO mailing list
>> >>>> SCIFIO at scif.io
>> >>>> http://scif.io/mailman/listinfo/scifio
>> >>>>
>> >>>
>> >>
>> >
>> >
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