[Insight-users] imageJ for SimpleITK

[Bradley Lowekamp]

Hello,

What have you done so far? What error message are you getting? What Linux distribution are you using? How did you install ImageJ? Are you really trying ImageJ or a derivative like Fuji?

The end goal is to have an executable named "imagej" or "ImageJ" in your path so that SimpleITK can call it.

Brad



On Nov 28, 2013, at 10:11 AM, elena bresciani <elena.bresciani87 at gmail.com> wrote:

> Hi to everybody
> 
> I'm getting started with SimpleITK and I'm going crazy trying to set the path to ImageJ.
> I'm working on a linux machine and I don't understand what I have to do with the script file 
> "Note: Linux installation requires an additional step. The Show function searches for an executable named ImageJ or imagej, however the default tarball does not come with this file. Instead it comes with a file names script. This file contains the installation instructions. In short the file should be renamed to "imagej" and the site specific variables for the installation location, and java must be set. Also consider the "newwindow" variable... Do you really want a new instance of ImageJ launched each time you use Show? Lastly, as the installation instructions indicate, the imagej wrapper should be in your path." 
> 
> from http://www.itk.org/Wiki/SimpleITK/GettingStarted
> 
> thank you in advance
> Elena
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