[Insight-users] Extract slice but keep orientation

Matt McCormick matt.mccormick at kitware.com
Mon May 6 15:18:17 EDT 2013


Hi Emma,

Extracting a 2D Slice from a 3D image is a lossy operation -- you need
to keep it as a 3D image with a size of 1 in the third dimension to
prevent losing that information.

HTH,
Matt

On Tue, Apr 30, 2013 at 10:50 AM, Emma Saunders
<emmasaunders123 at gmail.com> wrote:
> Hi all
>
> I am extracting a slice from a 3D volume using extractimage filter and
> storing as 2D to perform processing.  I set the direction of collapse to
> identity and left with a transverse slice.  I then wish to put this slice
> into it's original orientation which was sagittal, before the collapse, how
> can this be achieved in ITK?
>
> Many thanks
>
> Emma
>
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