[Insight-users] Reading a Dicom Series in ITK and visualizing it in VTK
unity csharp
developement.unity at gmail.com
Sat Mar 30 19:26:04 EDT 2013
I am relatively new to ITK and VTK. I am trying to read a DICOM series
into ITK and i want to visualize it with VTK .
the following code allows to read a DICOM series with success, now i
want to visualize it with vtk
int main( int argc, char* argv[] )
{
typedef unsigned short PixelType;
const unsigned int Dimension = 3;
typedef itk::Image< PixelType, Dimension > ImageType;
typedef itk::ImageSeriesReader< ImageType > ReaderType;
ReaderType::Pointer reader = ReaderType::New();
typedef itk::GDCMImageIO ImageIOType;
ImageIOType::Pointer dicomIO = ImageIOType::New();
reader->SetImageIO( dicomIO );
typedef itk::GDCMSeriesFileNames NamesGeneratorType;
NamesGeneratorType::Pointer nameGenerator = NamesGeneratorType::New();
nameGenerator->SetUseSeriesDetails( true );
nameGenerator->AddSeriesRestriction("0008|0021" );
nameGenerator->SetDirectory(
"C:/Lab/VersionEssaies/MCVS2008Test/DICOM/digest_article" );
try
{
typedef std::vector< std::string > SeriesIdContainer;
const SeriesIdContainer & seriesUID = nameGenerator->GetSeriesUIDs();
std::cout << seriesUID.size() << std::endl;
SeriesIdContainer::const_iterator seriesItr = seriesUID.begin();
SeriesIdContainer::const_iterator seriesEnd = seriesUID.end();
while( seriesItr != seriesEnd )
{
std::cout << seriesItr->c_str() << std::endl;
seriesItr++;
}
std::string seriesIdentifier;
if( argc > 3 )
{
seriesIdentifier = argv[3];
}
else
{
seriesIdentifier = seriesUID.begin()->c_str();
}
std::cout << seriesIdentifier.c_str() << std::endl;
typedef std::vector< std::string > FileNamesContainer;
FileNamesContainer fileNames;
fileNames = nameGenerator->GetFileNames( seriesIdentifier );
reader->SetFileNames( fileNames );
try
{
reader->Update();
}
catch (itk::ExceptionObject &ex)
{
std::cout << ex << std::endl;
return EXIT_FAILURE;
}
}
catch (itk::ExceptionObject &ex)
{
std::cout << ex << std::endl;
return EXIT_FAILURE;
}
return EXIT_SUCCESS;
}
If anyone has an example that does what i am trying to do
please let me know. I would really appreciate it.
Thanks in advance.
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