[Insight-users] compilation error
Laforest, Richard
laforestr at mir.wustl.edu
Mon Dec 2 16:41:24 EST 2013
Thanks.
Pretty much any of them.
I was trying ImageRegistration project and the project is defined to compile all examples within the 'Registration' example folder.
This is a copy of the CMakeLists.txt file.
Richard
project(ImageRegistration)
include_regular_expression("^.*$")
add_executable(ImageRegistration3 ImageRegistration3.cxx )
target_link_libraries(ImageRegistration3 ${ITK_LIBRARIES})
add_executable(ImageRegistration5 ImageRegistration5.cxx )
target_link_libraries(ImageRegistration5 ${ITK_LIBRARIES})
add_executable(ImageRegistration6 ImageRegistration6.cxx )
target_link_libraries(ImageRegistration6 ${ITK_LIBRARIES})
add_executable(ImageRegistration8 ImageRegistration8.cxx )
target_link_libraries(ImageRegistration8 ${ITK_LIBRARIES})
add_executable(ImageRegistration9 ImageRegistration9.cxx )
target_link_libraries(ImageRegistration9 ${ITK_LIBRARIES})
add_executable(ImageRegistration10 ImageRegistration10.cxx )
target_link_libraries(ImageRegistration10 ${ITK_LIBRARIES})
add_executable(DeformableRegistration4 DeformableRegistration4.cxx )
target_link_libraries(DeformableRegistration4 ${ITK_LIBRARIES})
add_executable(ImageRegistration4 ImageRegistration4.cxx )
target_link_libraries(ImageRegistration4 ${ITK_LIBRARIES})
add_executable(ImageRegistration7 ImageRegistration7.cxx )
target_link_libraries(ImageRegistration7 ${ITK_LIBRARIES})
add_executable(ImageRegistration11 ImageRegistration11.cxx )
target_link_libraries(ImageRegistration11 ${ITK_LIBRARIES})
add_executable(ImageRegistration12 ImageRegistration12.cxx )
target_link_libraries(ImageRegistration12 ${ITK_LIBRARIES})
add_executable(ImageRegistration13 ImageRegistration13.cxx )
target_link_libraries(ImageRegistration13 ${ITK_LIBRARIES})
add_executable(ImageRegistration14 ImageRegistration14.cxx )
target_link_libraries(ImageRegistration14 ${ITK_LIBRARIES})
add_executable(ImageRegistration15 ImageRegistration15.cxx )
target_link_libraries(ImageRegistration15 ${ITK_LIBRARIES})
add_executable(ImageRegistration16 ImageRegistration16.cxx )
target_link_libraries(ImageRegistration16 ${ITK_LIBRARIES})
add_executable(ImageRegistration18 ImageRegistration18.cxx )
target_link_libraries(ImageRegistration18 ${ITK_LIBRARIES})
add_executable(ImageRegistration19 ImageRegistration19.cxx )
target_link_libraries(ImageRegistration19 ${ITK_LIBRARIES})
add_executable(ImageRegistration20 ImageRegistration20.cxx )
target_link_libraries(ImageRegistration20 ${ITK_LIBRARIES})
add_executable(DeformableRegistration6 DeformableRegistration6.cxx )
target_link_libraries(DeformableRegistration6 ${ITK_LIBRARIES})
add_executable(DeformableRegistration7 DeformableRegistration7.cxx )
target_link_libraries(DeformableRegistration7 ${ITK_LIBRARIES})
add_executable(DeformableRegistration8 DeformableRegistration8.cxx )
target_link_libraries(DeformableRegistration8 ${ITK_LIBRARIES})
if( ITK_USE_FFTWD )
add_executable(DeformableRegistration9 DeformableRegistration9.cxx )
target_link_libraries(DeformableRegistration9 ${ITK_LIBRARIES})
add_executable(DeformableRegistration10 DeformableRegistration10.cxx )
target_link_libraries(DeformableRegistration10 ${ITK_LIBRARIES})
endif()
add_executable(MultiResImageRegistration1 MultiResImageRegistration1.cxx )
target_link_libraries(MultiResImageRegistration1 ${ITK_LIBRARIES})
add_executable(MultiResImageRegistration2 MultiResImageRegistration2.cxx )
target_link_libraries(MultiResImageRegistration2 ${ITK_LIBRARIES})
add_executable(MultiResImageRegistration3 MultiResImageRegistration3.cxx )
target_link_libraries(MultiResImageRegistration3 ${ITK_LIBRARIES})
add_executable(DeformableRegistration1 DeformableRegistration1.cxx )
target_link_libraries(DeformableRegistration1 ${ITK_LIBRARIES})
add_executable(DeformableRegistration11 DeformableRegistration11.cxx )
target_link_libraries(DeformableRegistration11 ${ITK_LIBRARIES})
add_executable(DeformableRegistration2 DeformableRegistration2.cxx )
target_link_libraries(DeformableRegistration2 ${ITK_LIBRARIES})
add_executable(DeformableRegistration3 DeformableRegistration3.cxx )
target_link_libraries(DeformableRegistration3 ${ITK_LIBRARIES})
add_executable(DeformableRegistration5 DeformableRegistration5.cxx )
target_link_libraries(DeformableRegistration5 ${ITK_LIBRARIES})
add_executable(DeformableRegistration12 DeformableRegistration12.cxx )
target_link_libraries(DeformableRegistration12 ${ITK_LIBRARIES})
add_executable(DeformableRegistration13 DeformableRegistration13.cxx )
target_link_libraries(DeformableRegistration13 ${ITK_LIBRARIES})
add_executable(DeformableRegistration14 DeformableRegistration14.cxx )
target_link_libraries(DeformableRegistration14 ${ITK_LIBRARIES})
add_executable(ChangeInformationImageFilter ChangeInformationImageFilter.cxx )
target_link_libraries(ChangeInformationImageFilter ${ITK_LIBRARIES})
add_executable(DeformableRegistration15 DeformableRegistration15.cxx )
target_link_libraries(DeformableRegistration15 ${ITK_LIBRARIES})
add_executable(DeformableRegistration16 DeformableRegistration16.cxx )
target_link_libraries(DeformableRegistration16 ${ITK_LIBRARIES})
add_executable(DeformableRegistration17 DeformableRegistration17.cxx )
target_link_libraries(DeformableRegistration17 ${ITK_LIBRARIES})
add_executable(DisplacementFieldInitialization DisplacementFieldInitialization.cxx )
target_link_libraries(DisplacementFieldInitialization ${ITK_LIBRARIES})
add_executable(LandmarkWarping2 LandmarkWarping2.cxx )
target_link_libraries(LandmarkWarping2 ${ITK_LIBRARIES})
add_executable(BSplineWarping1 BSplineWarping1.cxx )
target_link_libraries(BSplineWarping1 ${ITK_LIBRARIES})
add_executable(BSplineWarping2 BSplineWarping2.cxx )
target_link_libraries(BSplineWarping2 ${ITK_LIBRARIES})
add_executable(ThinPlateSplineWarp ThinPlateSplineWarp.cxx )
target_link_libraries(ThinPlateSplineWarp ${ITK_LIBRARIES})
add_executable(ModelToImageRegistration1 ModelToImageRegistration1.cxx )
target_link_libraries(ModelToImageRegistration1 ${ITK_LIBRARIES})
add_executable(ModelToImageRegistration2 ModelToImageRegistration2.cxx )
target_link_libraries(ModelToImageRegistration2 ${ITK_LIBRARIES})
add_executable(ImageRegistration1 ImageRegistration1.cxx )
target_link_libraries(ImageRegistration1 ${ITK_LIBRARIES})
add_executable(ImageRegistration2 ImageRegistration2.cxx )
target_link_libraries(ImageRegistration2 ${ITK_LIBRARIES})
add_executable(ImageRegistration17 ImageRegistration17.cxx )
target_link_libraries(ImageRegistration17 ${ITK_LIBRARIES})
#TODO needs updating to new statistics add_executable(ImageRegistrationHistogramPlotter ImageRegistrationHistogramPlotter.cxx )
#TODO needs updating to new statistics target_link_libraries(ImageRegistrationHistogramPlotter ${ITK_LIBRARIES})
add_executable(MeanSquaresImageMetric1 MeanSquaresImageMetric1.cxx )
target_link_libraries(MeanSquaresImageMetric1 ${ITK_LIBRARIES})
if(ITKV3_COMPATIBILITY)
add_executable(DeformationFieldJacobian DeformationFieldJacobian.cxx )
target_link_libraries(DeformationFieldJacobian ${ITK_LIBRARIES})
endif()
add_executable(IterativeClosestPoint1 IterativeClosestPoint1.cxx )
target_link_libraries(IterativeClosestPoint1 ${ITK_LIBRARIES})
add_executable(IterativeClosestPoint2 IterativeClosestPoint2.cxx )
target_link_libraries(IterativeClosestPoint2 ${ITK_LIBRARIES})
add_executable(IterativeClosestPoint3 IterativeClosestPoint3.cxx )
target_link_libraries(IterativeClosestPoint3 ${ITK_LIBRARIES})
if(BUILD_TESTING)
add_subdirectory(test)
endif()
-----Original Message-----
From: Bill Lorensen [mailto:bill.lorensen at gmail.com]
Sent: Monday, December 02, 2013 3:07 PM
To: Laforest, Richard
Cc: insight-users at itk.org
Subject: Re: [Insight-users] compilation error
What example? And what does your CMakeLists.txt file look like?
On Mon, Dec 2, 2013 at 2:32 PM, Laforest, Richard
<laforestr at mir.wustl.edu> wrote:
>
>
> Hello All,
>
>
>
> I just downloaded the itk code and I went thought the configuration without
> problems with cmake.
>
> I am using a Windows computer with Code::Blocks (version12.11) with MinGW
> compiler.
>
> I am now trying to compile an example and I get the following error message
> something like 72% through the compilation.
>
> I would appreciate any help on resolving this issue.
>
> Many thanks!
>
>
>
>
>
>
>
> In file included from
> C:\ITK\InsightToolkit-4.4.2\Modules\ThirdParty\DICOMParser\src\DICOMParser\DICOMFile.cxx:29:0:
>
> C:\ITK\InsightToolkit-4.4.2\Modules\ThirdParty\DICOMParser\src\DICOMParser\DICOMFile.h:51:28:
> error: 'string' in namespace '::' does not name a type
>
> C:\ITK\InsightToolkit-4.4.2\Modules\ThirdParty\DICOMParser\src\DICOMParser\DICOMFile.h:51:38:
> error: ISO C++ forbids declaration of 'filename' with no type [-fpermissive]
>
> C:\ITK\InsightToolkit-4.4.2\Modules\ThirdParty\DICOMParser\src\DICOMParser\DICOMFile.cxx:61:37:
> error: 'string' in namespace '::' does not name a type
>
> C:\ITK\InsightToolkit-4.4.2\Modules\ThirdParty\DICOMParser\src\DICOMParser\DICOMFile.cxx:61:47:
> error: ISO C++ forbids declaration of 'filename' with no type [-fpermissive]
>
> C:\ITK\InsightToolkit-4.4.2\Modules\ThirdParty\DICOMParser\src\DICOMParser\DICOMFile.cxx:
> In member function 'bool itkdicomparser::DICOMFile::Open(const int&)':
>
> C:\ITK\InsightToolkit-4.4.2\Modules\ThirdParty\DICOMParser\src\DICOMParser\DICOMFile.cxx:64:29:
> error: request for member 'c_str' in 'filename', which is of non-class type
> 'const int'
>
> mingw32-make.exe[2]: ***
> [Modules/ThirdParty/DICOMParser/src/DICOMParser/CMakeFiles/ITKDICOMParser.dir/DICOMFile.cxx.obj]
> Error 1
>
>
>
>
>
>
>
> Richard Laforest, Ph.D.
>
> Mallinckrodt Institute of Radiology, Box 8225
>
> Washington University Medical School
>
> 510 Kingshighway South - St.Louis, Missouri - 63110
>
> Tel: 314-362-8423 | Fax: 314-362-5428 | laforestr at wustl.edu
>
>
>
>
>
>
>
> Richard Laforest, Ph.D. | Associate Professor of Radiology
>
>
>
> Mallinckrodt Institute of Radiology, Box 8225
>
> Washington University Medical School
>
> 510 Kingshighway South - St.Louis, Missouri - 63110
>
> Tel: 314-362-8423 | Fax: 314-362-5428 | laforestr at wustl.edu
>
>
>
>
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--
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