[Insight-users] elongation implementation not matching its definition
Bradley Lowekamp
blowekamp at mail.nih.gov
Thu Aug 22 18:08:02 EDT 2013
I agree this is a documentation error. Wikipedia seems to agree with the source code:
http://en.wikipedia.org/wiki/Shape_factor_(image_analysis_and_microscopy)#Elongation_shape_factor
On Aug 22, 2013, at 5:13 PM, Cagatay Bilgin <bilgincc at gmail.com> wrote:
> Hello everyone,
>
> Either I am missing something or the write up about the elongation is not matching the actual implementation.
>
> "elongation is computed as the ratio of the largest principal moment by the smallest principal moment. "
>
> however in itkShapeLabelMapFilter.hxx elongation is defined as largest principal moment / second largest principal moment. In 3D the definition and the implementation becomes inconsistent.
>
> from itkShapeLabelMapFilter.hxx
> 331 elongation = vcl_sqrt(principalMoments[ImageDimension - 1] / principalMoments[ImageDimension - 2]);
> 332 flatness = vcl_sqrt(principalMoments[1] / principalMoments[0]);
>
> Cheers,
> C. Cagatay Bilgin
>
> --
> Cemal Cagatay Bilgin, PhD
> Life Sciences Division
> Lawrence Berkeley National Lab
> MS977, One Cyclotron Road
> Berkeley, CA 94720, USA
> Email: ccbilgin at lbl.gov
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