[Insight-users] cannot open DICOM with ITK 4.3.1

[Bill Lorensen]

Are you saying the same file could be read prior to the upgrade?



On Wed, Apr 17, 2013 at 5:26 AM, Luca Tersi <lucatersi at gmail.com> wrote:

> Dear all,
>
> I've been using ITK and VTK for a while, but after a recent upgrade to
> ITK4.3.1, I cannot open DICOM series or single .dcm files. I obtain the
> following exception:
>
>
> itk::ExceptionObject (0x2a12eb0)
>
> Location: "unknown"
>
> File:
> /home/lt/Work/FLUORO/kitware/ITK4.3.1_src/Modules/IO/GDCM/src/itkGDCMImageIO.cxx
>
> Line: 335
>
> Description: itk::ERROR: GDCMImageIO(0x3180830): Cannot read requested file
>
>
>
> This is my code:
>
>  QString filename = QFileDialog::getOpenFileName(currentDir, "*", this,
> "Open file dialog", "Choose Input DICOM File" );
>   if ( filename.length()  == 0 )
>     {
>       cout<<"aborted"<<endl;
>       return;
>     }
>
>   typedef itk::Image< IntPixelType, voxelDimension >        IntVolumeType;
>   typedef itk::ImageFileReader< IntVolumeType >       IntVolumeReaderType;
>   IntVolumeReaderType::Pointer reader=IntVolumeReaderType::New();
>   reader->SetFileName ( filename.latin1() );
>   ImageIOType::Pointer gdcmImageIO = ImageIOType::New();
>   reader->SetImageIO ( gdcmImageIO );
>
>   try
>   {
>     reader->Update();
>   }
>   catch ( itk::ExceptionObject & excp )
>   {
>     std::cerr << "Error reading the images " << std::endl;
>     std::cerr << excp << std::endl;
>     return;
>   }
>
>
>
>
> If I do not specify any IO object (it was working with ITK4.2.1) I get:
>
> itk::ImageFileReaderException (0x13a7510)
>
> Location: "void itk::ImageFileReader<TOutputImage,
> ConvertPixelTraits>::GenerateOutputInformation() [with TOutputImage =
> itk::Image<short unsigned int, 3u>; ConvertPixelTraits =
> itk::DefaultConvertPixelTraits<short unsigned int>]"
>
> File:
> /home/lt/Work/FLUORO/kitware/ITK4.3.1_src/Modules/IO/ImageBase/include/itkImageFileReader.hxx
>
> Line: 143
>
> Description: Could not create IO object for file
> /run/media/lt/CODONICS/DICOM/ST000000/SE000015/XA000000
>
> Tried to create one of the following:
>
> JPEGImageIO
>
> GDCMImageIO
>
> BMPImageIO
>
> LSMImageIO
>
> PNGImageIO
>
> TIFFImageIO
>
> VTKImageIO
>
> StimulateImageIO
>
> BioRadImageIO
>
> MetaImageIO
>
> NiftiImageIO
>
> NrrdImageIO
>
> GiplImageIO
>
> HDF5ImageIO
>
> You probably failed to set a file suffix, or
>
> set the suffix to an unsupported type.
>
> Is anybody having the same issue? Do you have any hints?
>
> Thanks in advance
>
> Luca
> ---
>
> *Luca Tersi, Ph.D.*
> *Health Sciences and Technologies - Interdepartmental Center for
> Industrial Research (HST - ICIR) *
> *Alma Mater Studiorum - University of Bologna; *Via Cavalcavia 797,
> I-47521 Cesena (FC) - Italy
>
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>
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