[Insight-users] Convert to 3D: DeformableRegistration17 & 16

[Ganesh Narayanasamy]

Is there someone who can help me understand the patch below that converts DeformableRegistration 16 & 17 from 2D into 3D image processing tool.

Thanks a ton,
Ganesh

> 
> > Date: Sun, 2 May 2010 18:14:09 -0400
> > Subject: Re: [Insight-users] Convert to 3D: DeformableRegistration17 & 16
> > From: luis.ibanez at kitware.com
> > To: nganesh76 at hotmail.com
> > CC: insight-users at itk.org
> > 
> > Hi Ganesh,
> > 
> > Here is the patch that you need to apply to
> > 
> >     DeformableRegistration16.cxx
> >     DeformableRegistration17.cxx
> > 
> > in order to use them in 3D images:
> > 
> > ------------------------------------------------------------------
> > Index: DeformableRegistration16.cxx
> > ===================================================================
> > RCS file: /cvsroot/Insight/Insight/Examples/Registration/DeformableRegistration16.cxx,v
> > retrieving revision 1.3
> > diff -p -u -r1.3 DeformableRegistration16.cxx
> > --- DeformableRegistration16.cxx	21 Nov 2009 21:23:25 -0000	1.3
> > +++ DeformableRegistration16.cxx	2 May 2010 22:03:24 -0000
> > @@ -125,10 +125,10 @@ protected:
> >    // define ITK short-hand types
> >    typedef short PixelType;
> >    typedef float InternalPixelType;
> > -  typedef itk::Image< PixelType, 2 > ImageType;
> > -  typedef itk::Image< InternalPixelType, 2 > InternalImageType;
> > -  typedef itk::Vector< float, 2 > VectorPixelType;
> > -  typedef itk::Image< VectorPixelType, 2 > DeformationFieldType;
> > +  typedef itk::Image< PixelType, 3 > ImageType;
> > +  typedef itk::Image< InternalPixelType, 3 > InternalImageType;
> > +  typedef itk::Vector< float, 3 > VectorPixelType;
> > +  typedef itk::Image< VectorPixelType, 3 > DeformationFieldType;
> >    typedef itk::DemonsRegistrationFilter< InternalImageType,
> >      InternalImageType, DeformationFieldType> RegistrationFilterType;
> > 
> > @@ -201,7 +201,7 @@ int main( int argc, char * argv [] )
> >      }
> > 
> >    // define ITK short-hand types
> > -  const unsigned int Dimension = 2;
> > +  const unsigned int Dimension = 3;
> >    typedef short PixelType;
> >    typedef float InternalPixelType;
> >    typedef itk::Image< PixelType, Dimension > ImageType;
> > Index: DeformableRegistration17.cxx
> > ===================================================================
> > RCS file: /cvsroot/Insight/Insight/Examples/Registration/DeformableRegistration17.cxx,v
> > retrieving revision 1.3
> > diff -p -u -r1.3 DeformableRegistration17.cxx
> > --- DeformableRegistration17.cxx	21 Nov 2009 21:23:25 -0000	1.3
> > +++ DeformableRegistration17.cxx	2 May 2010 22:03:25 -0000
> > @@ -203,7 +203,7 @@ int main( int argc, char * argv [] )
> >      }
> > 
> >    // define ITK short-hand types
> > -  const unsigned int Dimension = 2;
> > +  const unsigned int Dimension = 3;
> >    typedef short PixelType;
> >    typedef float InternalPixelType;
> >    typedef itk::Image< PixelType, Dimension > ImageType;
> > 
> > -----------------------------------------------
> > 
> > Regarding the examples:
> > 
> >        *  DeformableRegistration9
> >        *  DeformableRegistration10
> > 
> > Please look at the CMakeLists.txt file in
> > 
> >    Insight/Examples/Registration/
> > 
> > to line 90-98 you will find:
> > 
> > IF( USE_FFTWD )
> >   ADD_EXECUTABLE(DeformableRegistration9 DeformableRegistration9.cxx )
> >   TARGET_LINK_LIBRARIES(DeformableRegistration9
> >       ITKIO ITKAlgorithms ITKNumerics)
> > 
> >   ADD_EXECUTABLE(DeformableRegistration10 DeformableRegistration10.cxx )
> >   TARGET_LINK_LIBRARIES(DeformableRegistration10
> >                         ITKIO ITKAlgorithms ITKNumerics)
> > ENDIF( USE_FFTWD )
> > 
> > 
> > 
> > That is, these two examples are only build if you are
> > using the FFTW Library.
> > 
> > You will have to download and build FFTW, and then
> > reconfigure ITK with CMake, to turn ON the option
> > 
> >                   USE_FFTWD
> > 
> > 
> >      Regards,
> > 
> > 
> >           Luis
> > 
> > 
> > -------------------------------------
> > On Thu, Apr 29, 2010 at 11:00 AM, Ganesh Narayanasamy
> > <nganesh76 at hotmail.com> wrote:
> > >
> > >
> > > I would like to convert DeformableRegistration 17 & 16 from 2D into 3D. Can
> > > some one send me the changes along with the location. The ones that I can
> > > spot are:
> > >
> > > In DeformableRegistration17.cxx,
> > > Change Line 206 from "const unsigned int Dimension = 2;"  into 3
> > >
> > > In DeformableRegistration16.cxx,
> > > Change Line 204 from "const unsigned int Dimension = 2;"  into 3
> > >
> > > ***
> > > In a related query, I can find DeformableRegistration9 & 10.cxx inside
> > > C:\ITK316\ITK\Examples\Registration\, however all of the
> > > DeformableRegistration9 & 10.VC++ project related files are missing from the
> > > C:\ITK316\Build\Examples\Registration\. Can you help me create these ?
> > >
> > >
> > > Thanks,
> > > Ganesh
> > >

 		 	   		  
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